BLASTX nr result
ID: Ophiopogon21_contig00005270
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00005270
(2337 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal doma... 832 0.0
ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal doma... 811 0.0
ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal doma... 788 0.0
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat... 782 0.0
ref|XP_009421039.1| PREDICTED: RNA polymerase II C-terminal doma... 777 0.0
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ... 770 0.0
ref|XP_009386584.1| PREDICTED: RNA polymerase II C-terminal doma... 768 0.0
dbj|BAT14211.1| Os11g0521900, partial [Oryza sativa Japonica Group] 756 0.0
gb|EEE52187.1| hypothetical protein OsJ_34058 [Oryza sativa Japo... 756 0.0
gb|ABA93957.1| NLI interacting factor-like phosphatase family pr... 756 0.0
ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal doma... 755 0.0
ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal doma... 755 0.0
ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal doma... 753 0.0
ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal doma... 750 0.0
gb|KJB77193.1| hypothetical protein B456_012G125200 [Gossypium r... 750 0.0
gb|KJB77192.1| hypothetical protein B456_012G125200 [Gossypium r... 750 0.0
ref|XP_012459417.1| PREDICTED: RNA polymerase II C-terminal doma... 750 0.0
ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal doma... 750 0.0
ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 750 0.0
gb|KDO83166.1| hypothetical protein CISIN_1g000897mg [Citrus sin... 748 0.0
>ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Elaeis guineensis]
Length = 1268
Score = 832 bits (2150), Expect = 0.0
Identities = 464/793 (58%), Positives = 544/793 (68%), Gaps = 64/793 (8%)
Frame = -2
Query: 2324 VNSSGGLQMSS-----VNSSGAFQ---MAPLNTSGGSQMAPVKTSAKSRDPRLRFMNSEV 2169
VN++ +Q+++ +SS + Q + P+ G + + + KSRDPRLRF++SE
Sbjct: 488 VNTTSQIQVATSSAACTDSSSSHQPGTVKPVGQLGSAPNLATRPALKSRDPRLRFVSSES 547
Query: 2168 GGA--------------PQNGFAAGSVNSRKHKAIDEPVPDEHNLKRQRNESTRSRDAQV 2031
G A P NG G N RKHKA+DE +P+ H LKRQRN T S D Q+
Sbjct: 548 GSASDPNTQVMSLDSSAPNNGPVGGITNPRKHKAVDESLPENHTLKRQRNGLTNSGDVQM 607
Query: 2030 MPGRGG-WIEDNGMVASQMNNRVQPNKNMAVGNRNLVGGEVGPDRRLVXXXXXXXXXNG- 1857
+PGRGG W++D+ V SQ +++++ ++NM + +N V VG DRR G
Sbjct: 608 IPGRGGGWLDDSSAVGSQPSDKIRLSENMEIETKNPVS-VVGSDRRPDSNPNIHVSNTGT 666
Query: 1856 ----------GSASNMSTSPAPVVSLPSLLKDIAVNPTMLVELLKMXXXXXXXXXXXXXX 1707
S++ S+S A VS PSLLKDIAVNPTML++L++M
Sbjct: 667 CPIPSSTAAPASSTAPSSSAAASVSFPSLLKDIAVNPTMLMQLIQMEQQRLSAEAQQKTV 726
Query: 1706 A-------GPAVNGLSSAISP-------SPDVGQNPAAKPQM-------NGPNDMGKIRM 1590
++N LS A+S S +VGQNP +PQ+ N +D+G+IRM
Sbjct: 727 GLMQNMAHASSLNVLSGAVSSATVASMKSTEVGQNPGGRPQVPPQTVSTNSQSDVGRIRM 786
Query: 1589 KPRDPRRVLHSNMVQKSESLGSELAKSNGDLPSEVQSSKDLLTVQEQGEQAQTNTLPSQS 1410
KPRDPRRVLH NMVQK+E++ SE AK NG L S+ QSSKD + EQGEQAQ TLP+Q
Sbjct: 787 KPRDPRRVLH-NMVQKNETVVSERAKPNGTLSSDPQSSKDQSAIGEQGEQAQATTLPTQ- 844
Query: 1409 ASLPDISQQFTKNLQNLADIVSSSQASALP-VGTQNSSQLIPSKI--------CNDTTEP 1257
QF KN +NL DI S+ Q++ P +Q SQ I KI ++P
Sbjct: 845 --------QFAKNTKNLGDISSTLQSTTTPPAASQIISQPIQLKINKVDPRPAAAVVSDP 896
Query: 1256 KTVTGMCTQGETASGVIDLANPWGDVDHLLDGYDDQQKAAIQKERARRIEEQNKMFAERK 1077
KT++ + ++G T +G NPWGDVDHLLDGYDDQQKAAIQ+ERARRI EQNKMFA RK
Sbjct: 897 KTLSAVTSEGST-TGATPSTNPWGDVDHLLDGYDDQQKAAIQRERARRIAEQNKMFAARK 955
Query: 1076 XXXXXXXXXXXLNSAKFVEVDPIHEEILXXXXXXXXXXXXRHLFRFPHMGMWTKLRPGVW 897
LNSAKFVEVDP+HEEIL RHLFRF HMGMWTKLRPG+W
Sbjct: 956 LCLVLDLDHTLLNSAKFVEVDPVHEEILRKKEEQDREKPQRHLFRFQHMGMWTKLRPGIW 1015
Query: 896 NFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGTLFHGRVISKGDEGDPFDSDERVPKS 717
FLEKASKLYE+HLYTMGNKLYATEMAKVLDP GTLF GRVIS+GD+GDPFD DERVPKS
Sbjct: 1016 TFLEKASKLYEMHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGDDGDPFDGDERVPKS 1075
Query: 716 KDLDGVLGMESAVVIIDDSLRVWPHNKHNLIVVERYMYFPSSRRQFGLPGPSLLEIDHDE 537
KDLDGVLGMESAVVIIDDS+RVWPHNK NLIVVERY YFP SRRQFGL GPSLLEIDHDE
Sbjct: 1076 KDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLFGPSLLEIDHDE 1135
Query: 536 RPDAGTLASSLGVIERLHQIFFSHQSLNEVDVRNILAAEQRKILGGCKIVFSRVFPVGEA 357
RP+ GTLASSL VIER+HQ FFSH SLN++DVRNILAAEQRKIL GCKIVFSRVFPVGEA
Sbjct: 1136 RPEDGTLASSLAVIERIHQNFFSHHSLNDIDVRNILAAEQRKILAGCKIVFSRVFPVGEA 1195
Query: 356 NPHLHPLWQTAEQFGAECTNQIDEHVTHVVANSFGTDKVNWALSTGRFVVHPGWVEASAL 177
NPHLHPLWQ AEQFGA CTNQIDE VTHVVANS GTDKVNWALSTGRFVVHPGWVEASAL
Sbjct: 1196 NPHLHPLWQMAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASAL 1255
Query: 176 LYRRANEQDFAIK 138
LYRR +E DFA+K
Sbjct: 1256 LYRRVSEHDFAVK 1268
>ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Phoenix dactylifera]
Length = 1269
Score = 811 bits (2094), Expect = 0.0
Identities = 457/796 (57%), Positives = 531/796 (66%), Gaps = 67/796 (8%)
Frame = -2
Query: 2324 VNSSGGLQMSS-----VNSSGAFQMAPLNTSGGSQMAP---VKTSAKSRDPRLRFMNSEV 2169
VN++ +Q+++ +SS Q P+ G AP ++ + KSRDPRLRF+NSE
Sbjct: 489 VNTTSEIQVATNSAACTDSSSRHQPGPVKPVGQLGSAPNPAIRPALKSRDPRLRFVNSES 548
Query: 2168 GGA--------------PQNGFAAGSVNSRKHKAIDEPVPDEHNLKRQRNESTRSRDAQV 2031
G A P N G N RKHKA+DE P+ H LKRQ+N T S D Q+
Sbjct: 549 GNASDPNRRAMSLDFSAPNNDLVGGITNPRKHKAVDESFPENHTLKRQKNGLTNSSDVQM 608
Query: 2030 MPGRGG-WIEDNGMVASQMNNRVQPNKNMAVGNRNLVGGEVGPDRRLVXXXXXXXXXNG- 1857
PGRGG W+ED+ V SQ++++++ N+NM + +N G V DRR G
Sbjct: 609 TPGRGGGWLEDSSSVRSQLSDKIRLNENMEIEIKN-PGNVVMSDRRPDSNPNIQVTNTGT 667
Query: 1856 ----------GSASNMSTSPAPVVSLPSLLKDIAVNPTMLVELLKMXXXXXXXXXXXXXX 1707
S + S+S A VS PSLLKDIAVNPTML++L+++
Sbjct: 668 CMIPSSTTAPSSGTAPSSSAAASVSFPSLLKDIAVNPTMLMQLIQIEQQRLSAEAQQKTV 727
Query: 1706 A-------GPAVNGLSSAISP-------SPDVGQNPAAKPQM-------NGPNDMGKIRM 1590
++N L A+S S +VG NP+ +PQ+ N +D+G+IRM
Sbjct: 728 GLMHNMAHASSLNVLPGAVSSANVASMKSAEVGHNPSGRPQVTAQTVSTNSQSDVGRIRM 787
Query: 1589 KPRDPRRVLHSNMVQKSESLGSELAKSNGDLPSEVQSSKDLLTVQEQGEQAQTNTLPSQS 1410
KPRDPRR+LH NMVQK+E++ SE AK NG L S+ QSSKD L + EQGEQAQ LP+
Sbjct: 788 KPRDPRRILH-NMVQKNETIVSERAKPNGTLSSDPQSSKDHLAIGEQGEQAQATGLPTL- 845
Query: 1409 ASLPDISQQFTKNLQNLADIVSSSQASALPVGTQ-----------NSSQLIPSK-ICNDT 1266
Q KN +NL DI S Q + P+ N L P+ + ND
Sbjct: 846 --------QLAKNPKNLGDISSPLQLTTTPLAVPQIISQPIQFNINKVDLRPAAAVVND- 896
Query: 1265 TEPKTVTGMCTQGETASGVIDLANPWGDVDHLLDGYDDQQKAAIQKERARRIEEQNKMFA 1086
PKT++ + ++G T N WGDVDHLLDGYDDQQKAAIQ+ERARRI EQNKMFA
Sbjct: 897 --PKTLSTVASEGSTTVAT-QSTNAWGDVDHLLDGYDDQQKAAIQRERARRIAEQNKMFA 953
Query: 1085 ERKXXXXXXXXXXXLNSAKFVEVDPIHEEILXXXXXXXXXXXXRHLFRFPHMGMWTKLRP 906
RK LNSAKFVEVDP+HEEIL RHLFRF HMGMWTKLRP
Sbjct: 954 ARKLCLVLDLDHTLLNSAKFVEVDPVHEEILRKKEEQDREKPQRHLFRFQHMGMWTKLRP 1013
Query: 905 GVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGTLFHGRVISKGDEGDPFDSDERV 726
G+WNFLEKASKLYE+HLYTMGNKLYATEMAKVLDP GTLF GRVIS+GD+ +PFD DERV
Sbjct: 1014 GIWNFLEKASKLYEMHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGDDSEPFDGDERV 1073
Query: 725 PKSKDLDGVLGMESAVVIIDDSLRVWPHNKHNLIVVERYMYFPSSRRQFGLPGPSLLEID 546
PKSKDLDGVLGMESAVVIIDDS+RVWPHNK NLIVVERY YFP SRRQFGL GPSLLEID
Sbjct: 1074 PKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLFGPSLLEID 1133
Query: 545 HDERPDAGTLASSLGVIERLHQIFFSHQSLNEVDVRNILAAEQRKILGGCKIVFSRVFPV 366
HDERP+ GTLASSL VIER+H FFSH+SLN+VDVRNILAAEQRKIL GCKIVFSRVFPV
Sbjct: 1134 HDERPEDGTLASSLTVIERIHDDFFSHRSLNDVDVRNILAAEQRKILAGCKIVFSRVFPV 1193
Query: 365 GEANPHLHPLWQTAEQFGAECTNQIDEHVTHVVANSFGTDKVNWALSTGRFVVHPGWVEA 186
GEANPHLHPLWQ AEQFGA CTNQIDE VTHVVANS GTDKVNWALSTGRFVVHP WVEA
Sbjct: 1194 GEANPHLHPLWQMAEQFGAACTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPSWVEA 1253
Query: 185 SALLYRRANEQDFAIK 138
SALLYRR NEQDFA+K
Sbjct: 1254 SALLYRRVNEQDFAVK 1269
>ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Nelumbo nucifera]
Length = 1313
Score = 788 bits (2035), Expect = 0.0
Identities = 448/787 (56%), Positives = 528/787 (67%), Gaps = 55/787 (6%)
Frame = -2
Query: 2333 MSSVNSSGGLQMSSVNSSGAFQMA-----PLNTSG--GSQMAPVKTSAKSRDPRLRFMNS 2175
++++NSS L+ S +S A ++ P + G GS + V +AK+RDPRLR+ NS
Sbjct: 529 VATINSSTSLKTVSSATSYADNLSGQGLVPAVSVGQLGSMSSHVIRTAKNRDPRLRYANS 588
Query: 2174 EVGGA-----PQNGF--------AAGSVNSRKHKAIDEPVPDEHNLKRQRN---ESTRSR 2043
EVG P +G G + SRKHK ++E + D+H KRQRN S S
Sbjct: 589 EVGPLDLNQRPPSGDHDIRKSEPLGGIMGSRKHKIVEESLLDDHTFKRQRNGLINSGASG 648
Query: 2042 DAQVMPGRGGWIEDNGMVASQMNNRVQPNKNMAVGNRNLVGGEVGPDRRLVXXXXXXXXX 1863
D QV+ G GGW+E++ + Q +R + + R L GE +
Sbjct: 649 DVQVVSGSGGWLEESSSMGLQPTDRSRLIEKRESDPRKLGSGEASFGNKQDTGCSTYNVT 708
Query: 1862 NGGSASNMSTSPAPVVSLPSLLKDIAVNPTMLVELLKMXXXXXXXXXXXXXXAGPAVNGL 1683
GG+ ++ VSLPSLLKDIAVNPTML+ L+KM PA + +
Sbjct: 709 TGGNEQLTASGIGSTVSLPSLLKDIAVNPTMLMHLIKMEHQRLAVEALQKCG-NPAQSTM 767
Query: 1682 ---SSAISPSPDVGQNPAAKP-------------------QMNGPNDMGKIRMKPRDPRR 1569
SS++ P N A+K M D+GKIRMKPRDPRR
Sbjct: 768 QSSSSSVMPGKIASVNIASKTLSEPEKKSAGNSQISVQTASMIPHGDLGKIRMKPRDPRR 827
Query: 1568 VLHSNMVQKSESLGSELAKSNGDLPSEVQSSKDLLTVQEQGEQAQTNTLPSQSASLPDIS 1389
+LHSN QKS+S G E K+NG + +D L V++QGEQAQTN+L SQS + PDI+
Sbjct: 828 ILHSNTFQKSDSSGPERFKANGTPSPNTPTCRDNLIVRQQGEQAQTNSLLSQSTAPPDIA 887
Query: 1388 QQFTKNLQNLADIVSSSQASALP--VGTQNSSQLIPSK--------ICNDTTEPKTVTGM 1239
QQFTK L+N+A+I+S+SQA P V SSQ +P+K + D+ + ++ + +
Sbjct: 888 QQFTKKLKNIANILSASQAINTPSVVPQTISSQPVPAKMDKVDMKVVATDSNDQRSWSAL 947
Query: 1238 CTQGETASGVIDLANPWGDVDHLLDGYDDQQKAAIQKERARRIEEQNKMFAERKXXXXXX 1059
T E A+G N WGDV+HL +GYDDQQKAAIQ+ERARRIEEQN+MFA RK
Sbjct: 948 -TPEERAAGPSS-QNAWGDVEHLFEGYDDQQKAAIQRERARRIEEQNQMFAARKLCLVLD 1005
Query: 1058 XXXXXLNSAKFVEVDPIHEEILXXXXXXXXXXXXRHLFRFPHMGMWTKLRPGVWNFLEKA 879
LNSAKFVEVDP+HEE+L RHLFRF HMGMWTKLRPG+WNFLEKA
Sbjct: 1006 LDHTLLNSAKFVEVDPVHEEMLRKKEEQDREKPQRHLFRFTHMGMWTKLRPGIWNFLEKA 1065
Query: 878 SKLYELHLYTMGNKLYATEMAKVLDPKGTLFHGRVISKGDEGDPFDSDERVPKSKDLDGV 699
SKLYELHLYTMGNKLYATEMAKVLDP G LF GRVIS+GD+GDPFD DER PKSKDLDGV
Sbjct: 1066 SKLYELHLYTMGNKLYATEMAKVLDPTGVLFAGRVISRGDDGDPFDGDERQPKSKDLDGV 1125
Query: 698 LGMESAVVIIDDSLRVWPHNKHNLIVVERYMYFPSSRRQFGLPGPSLLEIDHDERPDAGT 519
LGMESAVVIIDDS+RVWPHNK NLIVVERY YFP SRRQ GL GPSLLEIDHDERP+ GT
Sbjct: 1126 LGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQLGLHGPSLLEIDHDERPEDGT 1185
Query: 518 LASSLGVIERLHQIFFSHQSLNEVDVRNILAAEQRKILGGCKIVFSRVFPVGEANPHLHP 339
LASSL VIER+HQ FFSHQ+LN+VDVRNILAAEQ+KIL GC+IVFSRVFPVGEANPHLHP
Sbjct: 1186 LASSLAVIERIHQNFFSHQNLNDVDVRNILAAEQQKILAGCRIVFSRVFPVGEANPHLHP 1245
Query: 338 LWQTAEQFGAECTNQIDEHVTHVVANSFGTDKVNWALSTGRFVVHPGWVEASALLYRRAN 159
LWQTAEQFGA CTNQIDE VTHVVA S GTDKVNWALSTGRFVVHPGWVEASALLYRRAN
Sbjct: 1246 LWQTAEQFGAVCTNQIDEQVTHVVAISLGTDKVNWALSTGRFVVHPGWVEASALLYRRAN 1305
Query: 158 EQDFAIK 138
E DFAIK
Sbjct: 1306 EHDFAIK 1312
>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
[Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
polymerase II C-terminal domain phosphatase-like 3,
putative [Theobroma cacao]
Length = 1290
Score = 782 bits (2020), Expect = 0.0
Identities = 432/770 (56%), Positives = 510/770 (66%), Gaps = 52/770 (6%)
Frame = -2
Query: 2291 VNSSGAFQMAPLNTSGGSQMAPV-----KTSAKSRDPRLRFMNSEVGGAPQN-------- 2151
V+S+ + + T + M+ V K+ AKSRDPRL F NS N
Sbjct: 528 VDSASSSLQGQITTRNATPMSSVSNIVSKSLAKSRDPRLWFANSNASALDLNERLLHNAS 587
Query: 2150 --GFAAGSVNSRKHKAIDEPVPDEHNLKRQRNESTR---SRDAQVMPGRGGWIEDNGMVA 1986
G ++SRK K+++EP+ D LKRQRNE +RD Q + G GGW+ED +
Sbjct: 588 KVAPVGGIMDSRKKKSVEEPILDSPALKRQRNELENLGVARDVQTVSGIGGWLEDTDAIG 647
Query: 1985 SQMNNRVQPNKNMAVGNRNLVGGEVGPDRRLVXXXXXXXXXNGGSASNMSTSPAPVVSLP 1806
SQ+ NR Q +N+ +R + G G+ + + SLP
Sbjct: 648 SQITNRNQTAENLESNSRKMDNGVTSSST-----LSGKTNITVGTNEQVPVTSTSTPSLP 702
Query: 1805 SLLKDIAVNPTMLVELLKMXXXXXXXXXXXXXXAG--------PAVNGLSSAIS-----P 1665
+LLKDIAVNPTML+ +LKM P+ N L +S P
Sbjct: 703 ALLKDIAVNPTMLINILKMGQQQRLGAEAQQKSPDPVKSTFHQPSSNSLLGVVSSTNVIP 762
Query: 1664 SPDV----------GQNPAAKPQMNGPNDMGKIRMKPRDPRRVLHSNMVQKSESLGSELA 1515
SP V PA Q+ P++ GKIRMKPRDPRRVLH N +Q+S S+G +
Sbjct: 763 SPSVNNVPSISSGISSKPAGNLQVPSPDESGKIRMKPRDPRRVLHGNSLQRSGSMGLDQL 822
Query: 1514 KSNGDLPSEVQSSKDLLTVQEQGEQAQTNTLPSQSASLPDISQQFTKNLQNLADIVSSSQ 1335
K+NG L S Q SKD L Q+ Q ++ + SQ PDI+QQFT NL+N+ADI+S SQ
Sbjct: 823 KTNGALTSSTQGSKDNLNAQKLDSQTESKPMQSQLVPPPDITQQFTNNLKNIADIMSVSQ 882
Query: 1334 A-SALPVGTQNSSQLIPSKIC--NDTTEPKTVTGMCTQGETASGVIDLA--------NPW 1188
A ++LP + N L+P + +D+ + K + +T +G+ A N W
Sbjct: 883 ALTSLPPVSHN---LVPQPVLIKSDSMDMKALVSNSEDQQTGAGLAPEAGATGPRSQNAW 939
Query: 1187 GDVDHLLDGYDDQQKAAIQKERARRIEEQNKMFAERKXXXXXXXXXXXLNSAKFVEVDPI 1008
GDV+HL + YDDQQKAAIQ+ERARRIEEQ KMF+ RK LNSAKF+EVDP+
Sbjct: 940 GDVEHLFERYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFIEVDPV 999
Query: 1007 HEEILXXXXXXXXXXXXRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKLYA 828
HEEIL RHLFRF HMGMWTKLRPG+WNFLEKASKLYELHLYTMGNKLYA
Sbjct: 1000 HEEILRKKEEQDREKPERHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYA 1059
Query: 827 TEMAKVLDPKGTLFHGRVISKGDEGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSLRVW 648
TEMAKVLDPKG LF GRVIS+GD+GDPFD DERVP+SKDL+GVLGMESAVVIIDDS+RVW
Sbjct: 1060 TEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESAVVIIDDSVRVW 1119
Query: 647 PHNKHNLIVVERYMYFPSSRRQFGLPGPSLLEIDHDERPDAGTLASSLGVIERLHQIFFS 468
PHNK NLIVVERY YFP SRRQFGL GPSLLEIDHDERP+ GTLASSL VIER+HQ FFS
Sbjct: 1120 PHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQDFFS 1179
Query: 467 HQSLNEVDVRNILAAEQRKILGGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQID 288
HQ+L++VDVRNILA+EQRKIL GC+IVFSRVFPVGEANPHLHPLWQTAEQFGA CTNQID
Sbjct: 1180 HQNLDDVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQID 1239
Query: 287 EHVTHVVANSFGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 138
EHVTHVVANS GTDKVNWALSTG+FVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1240 EHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEVDFAIK 1289
>ref|XP_009421039.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Musa acuminata subsp. malaccensis]
Length = 1228
Score = 777 bits (2007), Expect = 0.0
Identities = 449/782 (57%), Positives = 514/782 (65%), Gaps = 50/782 (6%)
Frame = -2
Query: 2333 MSSVNSSGGLQMSSVNSSGAFQMAPLNTSGGSQMAPVKT--------------SAKSRDP 2196
+S+ ++ +Q +V SS A N+S G Q PVK + K RDP
Sbjct: 459 VSNAETACTIQNQAVKSSST--AACSNSSAGDQPYPVKLVGQVGSGSKSSAKPALKRRDP 516
Query: 2195 RLRFMNSEVGG-----------APQNGFAAGSVNSRKHKAIDEPVPDEHNLKRQRNESTR 2049
RL+ MN+EV G A N GS+N+RKHK++DEPV +H +KRQ+N T
Sbjct: 517 RLKLMNNEVRGPSVGDKGIDSNALDNRLVGGSMNTRKHKSVDEPVTGDHKMKRQKNGFTG 576
Query: 2048 SRDAQVMPGRGGWIEDNGMVASQMNNRVQPNKNMAVGNRNLVGGEVGPDRRLVXXXXXXX 1869
SRD Q+ GRGGW+ED+ + Q ++R Q N+N V R GEVG ++
Sbjct: 577 SRDMQMTSGRGGWLEDSSI--PQPSDRNQINENFQVEVRKPGSGEVGSGKK--SDSNMNF 632
Query: 1868 XXNGGSASNMSTSPAPVVSLPSLLKDIAVNPTMLVELLKMXXXXXXXXXXXXXXAGPA-- 1695
G N S + +SLP LLK AVNPT+ V+LL+M A +
Sbjct: 633 SMLNGLIPNPSGNLPNTLSLPPLLK--AVNPTIFVQLLQMEQHRLAAENHQIVTASTSDV 690
Query: 1694 -----VNGLSSAISP-------SPDVGQN-------PAAKPQMNGPNDMGKIRMKPRDPR 1572
VNGL A+S S +VGQN P+ ++ ND+G+IRMKPRDPR
Sbjct: 691 TNVSKVNGLPGAVSSVNSTPLKSQEVGQNHLGMSQIPSQSASVSSQNDVGRIRMKPRDPR 750
Query: 1571 RVLHSNMVQKSESLGSELAKSNGDLPSEVQSSKDLLTVQEQGEQAQTNTLPSQSASLPDI 1392
R LH+NMVQ + SE K N +P QSS T +E GEQAQ + L +Q P++
Sbjct: 751 RALHNNMVQMKNVIVSEQNKINEAIPGP-QSSMGHSTAREPGEQAQASVLATQFVPQPNM 809
Query: 1391 SQQFTKNLQNLADIVSSSQASALPVGTQNSSQLIPSKICNDTTEPKTV----TGMCTQGE 1224
S+Q TKNL N IVSSSQ +A +Q Q IPSK P + +
Sbjct: 810 SRQLTKNLGN---IVSSSQLAAT---SQAVPQYIPSKANQVNVRPASAELNDSKTLVSEA 863
Query: 1223 TASGVIDLANPWGDVDHLLDGYDDQQKAAIQKERARRIEEQNKMFAERKXXXXXXXXXXX 1044
TA GV N WGDVDH LDGY+D+Q+AAIQKERARRI EQNKMFA RK
Sbjct: 864 TAKGVSQSVNAWGDVDHFLDGYNDEQRAAIQKERARRIAEQNKMFAARKLCLVLDLDHTL 923
Query: 1043 LNSAKFVEVDPIHEEILXXXXXXXXXXXXRHLFRFPHMGMWTKLRPGVWNFLEKASKLYE 864
LNSAKFVEVDP+HEEIL RHLF F HMGMWTKLRPG+WNFL+KASKLYE
Sbjct: 924 LNSAKFVEVDPVHEEILRRKEEQDREKPQRHLFCFHHMGMWTKLRPGIWNFLDKASKLYE 983
Query: 863 LHLYTMGNKLYATEMAKVLDPKGTLFHGRVISKGDEGDPFDSDERVPKSKDLDGVLGMES 684
LHLYTMGNKLYATEMAKVLDP GTLF GRVIS+GD+ D D DERVPKSKDLDGVLGMES
Sbjct: 984 LHLYTMGNKLYATEMAKVLDPTGTLFSGRVISRGDDADTVDGDERVPKSKDLDGVLGMES 1043
Query: 683 AVVIIDDSLRVWPHNKHNLIVVERYMYFPSSRRQFGLPGPSLLEIDHDERPDAGTLASSL 504
AVVIIDDSLRVWP NK NLIVVERY YFPSSRRQFGL GPSLLEIDHDERP+ GTLASSL
Sbjct: 1044 AVVIIDDSLRVWPLNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSL 1103
Query: 503 GVIERLHQIFFSHQSLNEVDVRNILAAEQRKILGGCKIVFSRVFPVGEANPHLHPLWQTA 324
VIER+HQ FFSH SL +VDVRNILAAEQRKIL GC+IVFSRVFPVGEANPHLHPLWQTA
Sbjct: 1104 AVIERIHQNFFSHHSLKDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTA 1163
Query: 323 EQFGAECTNQIDEHVTHVVANSFGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFA 144
EQFGA CTNQIDE VTHVVANS GTDKVNWALSTGRFVVHPGWVEASALLYRRANE DFA
Sbjct: 1164 EQFGAICTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFA 1223
Query: 143 IK 138
+K
Sbjct: 1224 VK 1225
>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
phosphatase, putative [Ricinus communis]
Length = 1195
Score = 770 bits (1989), Expect = 0.0
Identities = 426/774 (55%), Positives = 513/774 (66%), Gaps = 42/774 (5%)
Frame = -2
Query: 2333 MSSVNSSGGLQMSSVNSSGAFQMAPLNTSGGSQMAP---VKTSAKSRDPRLRFMNSEVGG 2163
++S S+ + + ++ S + + ++ + AP VK SAKSRDPRLRF+NS+
Sbjct: 421 LTSGQSNASISLPRMDGSSLPGVISIKSAVRASSAPSLTVKASAKSRDPRLRFVNSDSNA 480
Query: 2162 APQNGFA------------AGSVNSRKHKAIDEPVPDEHNLKRQRNESTRS---RDAQVM 2028
QN A G++N ++ K +D+P+PD H+LKRQ+N S RD + M
Sbjct: 481 LDQNHRAVPVVNTLKVEPIGGTMNKKRQKIVDDPIPDGHSLKRQKNALENSGVVRDVKTM 540
Query: 2027 PGRGGWIEDNGMVASQMNNRVQPNKNMAVGNRNLVGGEVGPDRRL---VXXXXXXXXXNG 1857
G GGW+ED MV Q N+ Q N R GG V V
Sbjct: 541 VGSGGWLEDTDMVGPQTMNKNQLVDNAESDPRRKDGGGVCTSSSCISSVNISGTEQIPVT 600
Query: 1856 GSASNMSTSPAPV----VSLPSLLKDIAVNPTMLVELLKMXXXXXXXXXXXXXXAGPAVN 1689
G++ + PV ++P LLK+IAVNPTML+ +LKM PA +
Sbjct: 601 GTSVPIGGELVPVKGSTAAIPDLLKNIAVNPTMLINILKMGQQQRLALEAQQKPVDPAKS 660
Query: 1688 -----GLSSAISPSPDVG-------QNPA----AKPQMNGPNDMGKIRMKPRDPRRVLHS 1557
+S + P VG PA PQ+ +D+GKIRMKPRDPRRVLH+
Sbjct: 661 TTYPLNSNSMLGTVPVVGAAHSGILPRPAGTVQVSPQLGTADDLGKIRMKPRDPRRVLHN 720
Query: 1556 NMVQKSESLGSELAKSNGDLPSEVQSSKDLLTVQEQGEQAQTNTLPSQSASLPDISQQFT 1377
N +Q++ S+GSE K+N Q +KD +Q+Q Q + +P QS +LPDIS FT
Sbjct: 721 NALQRNGSMGSEHLKTNLTSIPINQETKDNQNLQKQEGQVEKKPVPLQSLALPDISMPFT 780
Query: 1376 KNLQNLADIVSSSQAS-ALPVGTQNSSQLIPSKICNDTTEPKTVTGMCTQGETASGVIDL 1200
KNL+N+ADIVS S AS + P+ QN + + + + + A+
Sbjct: 781 KNLKNIADIVSVSHASTSQPLVPQNPASQPMRTTISSSDQFLGIGSAPGAAAAAAAGPRT 840
Query: 1199 ANPWGDVDHLLDGYDDQQKAAIQKERARRIEEQNKMFAERKXXXXXXXXXXXLNSAKFVE 1020
N WGDV+HL +GY+DQQKAAIQ+ERARRIEEQ K+F+ RK LNSAKFVE
Sbjct: 841 QNAWGDVEHLFEGYNDQQKAAIQRERARRIEEQKKLFSARKLCLVLDLDHTLLNSAKFVE 900
Query: 1019 VDPIHEEILXXXXXXXXXXXXRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGN 840
VDP+H+EIL RHLFRFPHMGMWTKLRPG+WNFLEKASKLYELHLYTMGN
Sbjct: 901 VDPVHDEILRKKEEQDREKAHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGN 960
Query: 839 KLYATEMAKVLDPKGTLFHGRVISKGDEGDPFDSDERVPKSKDLDGVLGMESAVVIIDDS 660
KLYATEMAKVLDP G LF+GRVIS+GD+G+PFD DER+PKSKDL+GVLGMES VVI+DDS
Sbjct: 961 KLYATEMAKVLDPTGVLFNGRVISRGDDGEPFDGDERIPKSKDLEGVLGMESGVVIMDDS 1020
Query: 659 LRVWPHNKHNLIVVERYMYFPSSRRQFGLPGPSLLEIDHDERPDAGTLASSLGVIERLHQ 480
+RVWPHNK NLIVVERY+YFP SRRQFGLPGPSLLEIDHDERP+ GTLA SL VIER+HQ
Sbjct: 1021 VRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQ 1080
Query: 479 IFFSHQSLNEVDVRNILAAEQRKILGGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECT 300
FF+H SL+E DVRNILA+EQRKIL GC+IVFSRVFPVGEANPHLHPLWQTAEQFGA CT
Sbjct: 1081 NFFTHPSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCT 1140
Query: 299 NQIDEHVTHVVANSFGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 138
NQIDE VTHVVANS GTDKVNWALSTGRFVV+PGWVEASALLYRRANEQDFAIK
Sbjct: 1141 NQIDEQVTHVVANSLGTDKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAIK 1194
>ref|XP_009386584.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Musa acuminata subsp. malaccensis]
Length = 1251
Score = 768 bits (1982), Expect = 0.0
Identities = 431/741 (58%), Positives = 505/741 (68%), Gaps = 42/741 (5%)
Frame = -2
Query: 2225 VKTSAKSRDPRLRFMNSEVGG-----------APQNGFAAGSVNSRKHKAIDEPVPD-EH 2082
VK + K RDPRLRFMN+EV G AP +GF G++N+RKHK DE +
Sbjct: 522 VKPALKRRDPRLRFMNNEVRGPSEERSGIRCNAPDDGFLGGTINARKHKIADESAAVVDQ 581
Query: 2081 NLKRQRNESTRSRDAQVMPGRGGWIEDNGMVASQMNNRVQPNKNMAVGNRNLVGGEVGPD 1902
+KRQRN S SR+ V+ G W+E + ++ Q + R Q N+N+ R GEVG D
Sbjct: 582 TMKRQRNGSMSSRNMHVISGSSEWLEGDSIIP-QPSERSQVNENLHADIRKAGTGEVGFD 640
Query: 1901 RRLVXXXXXXXXXNGGSASNMSTSPAPVVSLPSLLKDIAVNPTMLVELLKMXXXXXXXXX 1722
+ G N S++PA +SLPSLLK AVNPT+LV+LLKM
Sbjct: 641 KE--PNSNANFSMLNGLKPNSSSNPAGPISLPSLLK--AVNPTILVQLLKMEQQRLAAEN 696
Query: 1721 XXXXXAGPA-------VNGLSSAISP-------SPDVGQNPAAKPQ-------MNGPNDM 1605
+ V+GL A+S S + GQN Q M+ ND+
Sbjct: 697 QQNVTTSTSDITNVSSVSGLPGAVSSVISTPVRSNEPGQNQLGISQVSPQSASMSSQNDL 756
Query: 1604 GKIRMKPRDPRRVLHSNMVQKSESLGSELAKSNGDLPSEVQSSKDLLTVQEQGEQAQTNT 1425
G+IRMKPRDPRR+LH+N+VQK+E + SE NG Q + LT +E GEQAQ+N
Sbjct: 757 GRIRMKPRDPRRILHNNIVQKNEVVASEQNNINGATAGP-QGTMGHLTAREAGEQAQSNI 815
Query: 1424 LPSQSASLPDISQQFTKNLQNLADIVSSSQASAL-PVGTQNSSQLIPSK--------ICN 1272
LP+Q + PD S++ TKNL IVSS Q + P +SQ I SK
Sbjct: 816 LPTQFSPPPDRSEELTKNLPT---IVSSLQLTTTSPTIPHGNSQPISSKGNQMDVKLALA 872
Query: 1271 DTTEPKTVTGMCTQGETASGVIDLANPWGDVDHLLDGYDDQQKAAIQKERARRIEEQNKM 1092
+ +PKTV+ + + E ++GV + N WGDVDHLLDGY+D+QKAAIQ+ERARRI EQNKM
Sbjct: 873 EVNDPKTVSDVLS--ERSAGVSESTNLWGDVDHLLDGYNDEQKAAIQRERARRIVEQNKM 930
Query: 1091 FAERKXXXXXXXXXXXLNSAKFVEVDPIHEEILXXXXXXXXXXXXRHLFRFPHMGMWTKL 912
FA RK LNSAKFVEVDP+HEE+L RH++ F HMGMWTKL
Sbjct: 931 FAARKLCLVLDLDHTLLNSAKFVEVDPVHEEVLRRKEEQDREKPQRHIYCFQHMGMWTKL 990
Query: 911 RPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGTLFHGRVISKGDEGDPFDSDE 732
RPG+WNFLEKASKLYELHLYTMGNKLYATEMAKVLDP G+LF GRVIS+GD+GDP + DE
Sbjct: 991 RPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGSLFSGRVISRGDDGDPLNGDE 1050
Query: 731 RVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKHNLIVVERYMYFPSSRRQFGLPGPSLLE 552
RVPKSKDLDGVLGMESAVVIIDDS+RVWPHNK NLIVVERY +FPSSRRQFGL GPSLLE
Sbjct: 1051 RVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTFFPSSRRQFGLLGPSLLE 1110
Query: 551 IDHDERPDAGTLASSLGVIERLHQIFFSHQSLNEVDVRNILAAEQRKILGGCKIVFSRVF 372
IDHDERP+ GTLASSL VIER+HQ FFSH S+ + DVRNILA+EQRKIL GC+IVFSRVF
Sbjct: 1111 IDHDERPEDGTLASSLAVIERIHQNFFSHHSIKDADVRNILASEQRKILTGCRIVFSRVF 1170
Query: 371 PVGEANPHLHPLWQTAEQFGAECTNQIDEHVTHVVANSFGTDKVNWALSTGRFVVHPGWV 192
PVGEANPHLHPLWQTAEQFGA CT+QIDE VTHVVANS GTDKVNWALSTGRFVVHPGWV
Sbjct: 1171 PVGEANPHLHPLWQTAEQFGAVCTSQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWV 1230
Query: 191 EASALLYRRANEQDFAIKG*T 129
EASALLYRR NE DFA+K T
Sbjct: 1231 EASALLYRRVNEHDFAVKAVT 1251
>dbj|BAT14211.1| Os11g0521900, partial [Oryza sativa Japonica Group]
Length = 1226
Score = 756 bits (1952), Expect = 0.0
Identities = 422/757 (55%), Positives = 504/757 (66%), Gaps = 51/757 (6%)
Frame = -2
Query: 2255 NTSGGSQMAPVKTSAKSRDPRLRFMNSEVGGA-------------PQNGFAAG---SVNS 2124
+ SG + + +K +AKSRDPRL+F+N + GG P G S+NS
Sbjct: 477 SVSGSNHL--LKATAKSRDPRLKFLNRDTGGVADANRRVNFAEPNPSKDRTMGGGVSINS 534
Query: 2123 RKHKAIDEPVPDEHNLKRQRNESTRSRDAQVMPGRGGWIEDNGMVASQMNNRVQPNKNMA 1944
RK+KA+DEP+ DE+ LKR R RD Q GRGGW +D G ++S ++ QPN+N
Sbjct: 535 RKNKAVDEPMVDENALKRSRGVIGNLRDMQPT-GRGGWAKDGGNISSYSSDGFQPNQNTR 593
Query: 1943 VGNRNLVGGEVGPDRRLVXXXXXXXXXNGGSA---------SNMSTSPAPVVSLPSLLKD 1791
+GN + D L +G S S TS AP VSLP++LKD
Sbjct: 594 LGNNTTGNHNIRTDSTLASNLNNTTNNSGTSPGIVQAPQTNSAPQTSSAPAVSLPAMLKD 653
Query: 1790 IAVNPTMLVELLKMXXXXXXXXXXXXXXAGPAVNGLSSAISP-----------SPDVGQN 1644
IAVNPTML++ ++M G++S ++P + +V
Sbjct: 654 IAVNPTMLMQWIQMEQQKMSASEPQQKVTASV--GMTSNVTPGMVLPLGNAPKTTEVAAV 711
Query: 1643 PAAKPQ-------MNGPNDMGKIRMKPRDPRRVLHSNMVQKSESL---GSELAKSNGDLP 1494
P+ +PQ M+ ND G IRMKPRDPRR+LHSN+VQK++++ G E AKSNG P
Sbjct: 712 PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTVPPVGVEQAKSNGTAP 771
Query: 1493 SEVQSSKDLLTVQEQ-GEQAQTNTLPSQSASLPDISQQFTKNLQNLADIVSSSQASALPV 1317
+ QSSKD L Q+Q EQ Q LPS + ++ T N +++ ++ A P
Sbjct: 772 PDSQSSKDHLLNQDQKAEQLQAIALPSLPVT--SSARPVTMNANPVSNSQLAATALMPPH 829
Query: 1316 G----TQNSSQLIPSKICNDTTEPKTVTGMCTQGETASGVIDLANPWGDVDHLLDGYDDQ 1149
G T +S ++ E T TA + A+P+GDVDHLLDGYDDQ
Sbjct: 830 GNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPASPYGDVDHLLDGYDDQ 889
Query: 1148 QKAAIQKERARRIEEQNKMFAERKXXXXXXXXXXXLNSAKFVEVDPIHEEILXXXXXXXX 969
QKA IQKERARRI+EQ+KMFA RK LNSAKF+EVD IH EIL
Sbjct: 890 QKALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKFIEVDHIHGEILRKKEEQDR 949
Query: 968 XXXXRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGTL 789
RHLF F HMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK+YATEMAKVLDP GTL
Sbjct: 950 ERAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKVYATEMAKVLDPTGTL 1009
Query: 788 FHGRVISKGDEGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKHNLIVVERY 609
F GRVIS+GD+GDPFDSDERVPKSKDLDGVLGMESAVVIIDDS+RVWPHNKHNLIVVERY
Sbjct: 1010 FAGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKHNLIVVERY 1069
Query: 608 MYFPSSRRQFGLPGPSLLEIDHDERPDAGTLASSLGVIERLHQIFFSHQSLNEVDVRNIL 429
YFP SRRQFGLPGPSLLEID DERP+ GTLASSL VIER+H+ FFSH +LN+ DVR+IL
Sbjct: 1070 TYFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHKNFFSHPNLNDADVRSIL 1129
Query: 428 AAEQRKILGGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEHVTHVVANSFGT 249
A+EQ++ILGGC+IVFSR+FPVGEANPH+HPLWQTAEQFGA CTNQID+ VTHVVANS GT
Sbjct: 1130 ASEQQRILGGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVCTNQIDDRVTHVVANSLGT 1189
Query: 248 DKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 138
DKVNWALSTGRFVVHPGWVEASALLYRRA+E DFA+K
Sbjct: 1190 DKVNWALSTGRFVVHPGWVEASALLYRRASELDFAVK 1226
>gb|EEE52187.1| hypothetical protein OsJ_34058 [Oryza sativa Japonica Group]
Length = 1267
Score = 756 bits (1952), Expect = 0.0
Identities = 422/757 (55%), Positives = 504/757 (66%), Gaps = 51/757 (6%)
Frame = -2
Query: 2255 NTSGGSQMAPVKTSAKSRDPRLRFMNSEVGGA-------------PQNGFAAG---SVNS 2124
+ SG + + +K +AKSRDPRL+F+N + GG P G S+NS
Sbjct: 518 SVSGSNHL--LKATAKSRDPRLKFLNRDTGGVADANRRVNFAEPNPSKDRTMGGGVSINS 575
Query: 2123 RKHKAIDEPVPDEHNLKRQRNESTRSRDAQVMPGRGGWIEDNGMVASQMNNRVQPNKNMA 1944
RK+KA+DEP+ DE+ LKR R RD Q GRGGW +D G ++S ++ QPN+N
Sbjct: 576 RKNKAVDEPMVDENALKRSRGVIGNLRDMQPT-GRGGWAKDGGNISSYSSDGFQPNQNTR 634
Query: 1943 VGNRNLVGGEVGPDRRLVXXXXXXXXXNGGSA---------SNMSTSPAPVVSLPSLLKD 1791
+GN + D L +G S S TS AP VSLP++LKD
Sbjct: 635 LGNNTTGNHNIRTDSTLASNLNNTTNNSGTSPGIVQAPQTNSAPQTSSAPAVSLPAMLKD 694
Query: 1790 IAVNPTMLVELLKMXXXXXXXXXXXXXXAGPAVNGLSSAISP-----------SPDVGQN 1644
IAVNPTML++ ++M G++S ++P + +V
Sbjct: 695 IAVNPTMLMQWIQMEQQKMSASEPQQKVTASV--GMTSNVTPGMVLPLGNAPKTTEVAAV 752
Query: 1643 PAAKPQ-------MNGPNDMGKIRMKPRDPRRVLHSNMVQKSESL---GSELAKSNGDLP 1494
P+ +PQ M+ ND G IRMKPRDPRR+LHSN+VQK++++ G E AKSNG P
Sbjct: 753 PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTVPPVGVEQAKSNGTAP 812
Query: 1493 SEVQSSKDLLTVQEQ-GEQAQTNTLPSQSASLPDISQQFTKNLQNLADIVSSSQASALPV 1317
+ QSSKD L Q+Q EQ Q LPS + ++ T N +++ ++ A P
Sbjct: 813 PDSQSSKDHLLNQDQKAEQLQAIALPSLPVT--SSARPVTMNANPVSNSQLAATALMPPH 870
Query: 1316 G----TQNSSQLIPSKICNDTTEPKTVTGMCTQGETASGVIDLANPWGDVDHLLDGYDDQ 1149
G T +S ++ E T TA + A+P+GDVDHLLDGYDDQ
Sbjct: 871 GNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPASPYGDVDHLLDGYDDQ 930
Query: 1148 QKAAIQKERARRIEEQNKMFAERKXXXXXXXXXXXLNSAKFVEVDPIHEEILXXXXXXXX 969
QKA IQKERARRI+EQ+KMFA RK LNSAKF+EVD IH EIL
Sbjct: 931 QKALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKFIEVDHIHGEILRKKEEQDR 990
Query: 968 XXXXRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGTL 789
RHLF F HMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK+YATEMAKVLDP GTL
Sbjct: 991 ERAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKVYATEMAKVLDPTGTL 1050
Query: 788 FHGRVISKGDEGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKHNLIVVERY 609
F GRVIS+GD+GDPFDSDERVPKSKDLDGVLGMESAVVIIDDS+RVWPHNKHNLIVVERY
Sbjct: 1051 FAGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKHNLIVVERY 1110
Query: 608 MYFPSSRRQFGLPGPSLLEIDHDERPDAGTLASSLGVIERLHQIFFSHQSLNEVDVRNIL 429
YFP SRRQFGLPGPSLLEID DERP+ GTLASSL VIER+H+ FFSH +LN+ DVR+IL
Sbjct: 1111 TYFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHKNFFSHPNLNDADVRSIL 1170
Query: 428 AAEQRKILGGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEHVTHVVANSFGT 249
A+EQ++ILGGC+IVFSR+FPVGEANPH+HPLWQTAEQFGA CTNQID+ VTHVVANS GT
Sbjct: 1171 ASEQQRILGGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVCTNQIDDRVTHVVANSLGT 1230
Query: 248 DKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 138
DKVNWALSTGRFVVHPGWVEASALLYRRA+E DFA+K
Sbjct: 1231 DKVNWALSTGRFVVHPGWVEASALLYRRASELDFAVK 1267
>gb|ABA93957.1| NLI interacting factor-like phosphatase family protein, expressed
[Oryza sativa Japonica Group]
Length = 1272
Score = 756 bits (1952), Expect = 0.0
Identities = 422/757 (55%), Positives = 504/757 (66%), Gaps = 51/757 (6%)
Frame = -2
Query: 2255 NTSGGSQMAPVKTSAKSRDPRLRFMNSEVGGA-------------PQNGFAAG---SVNS 2124
+ SG + + +K +AKSRDPRL+F+N + GG P G S+NS
Sbjct: 523 SVSGSNHL--LKATAKSRDPRLKFLNRDTGGVADANRRVNFAEPNPSKDRTMGGGVSINS 580
Query: 2123 RKHKAIDEPVPDEHNLKRQRNESTRSRDAQVMPGRGGWIEDNGMVASQMNNRVQPNKNMA 1944
RK+KA+DEP+ DE+ LKR R RD Q GRGGW +D G ++S ++ QPN+N
Sbjct: 581 RKNKAVDEPMVDENALKRSRGVIGNLRDMQPT-GRGGWAKDGGNISSYSSDGFQPNQNTR 639
Query: 1943 VGNRNLVGGEVGPDRRLVXXXXXXXXXNGGSA---------SNMSTSPAPVVSLPSLLKD 1791
+GN + D L +G S S TS AP VSLP++LKD
Sbjct: 640 LGNNTTGNHNIRTDSTLASNLNNTTNNSGTSPGIVQAPQTNSAPQTSSAPAVSLPAMLKD 699
Query: 1790 IAVNPTMLVELLKMXXXXXXXXXXXXXXAGPAVNGLSSAISP-----------SPDVGQN 1644
IAVNPTML++ ++M G++S ++P + +V
Sbjct: 700 IAVNPTMLMQWIQMEQQKMSASEPQQKVTASV--GMTSNVTPGMVLPLGNAPKTTEVAAV 757
Query: 1643 PAAKPQ-------MNGPNDMGKIRMKPRDPRRVLHSNMVQKSESL---GSELAKSNGDLP 1494
P+ +PQ M+ ND G IRMKPRDPRR+LHSN+VQK++++ G E AKSNG P
Sbjct: 758 PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTVPPVGVEQAKSNGTAP 817
Query: 1493 SEVQSSKDLLTVQEQ-GEQAQTNTLPSQSASLPDISQQFTKNLQNLADIVSSSQASALPV 1317
+ QSSKD L Q+Q EQ Q LPS + ++ T N +++ ++ A P
Sbjct: 818 PDSQSSKDHLLNQDQKAEQLQAIALPSLPVT--SSARPVTMNANPVSNSQLAATALMPPH 875
Query: 1316 G----TQNSSQLIPSKICNDTTEPKTVTGMCTQGETASGVIDLANPWGDVDHLLDGYDDQ 1149
G T +S ++ E T TA + A+P+GDVDHLLDGYDDQ
Sbjct: 876 GNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPASPYGDVDHLLDGYDDQ 935
Query: 1148 QKAAIQKERARRIEEQNKMFAERKXXXXXXXXXXXLNSAKFVEVDPIHEEILXXXXXXXX 969
QKA IQKERARRI+EQ+KMFA RK LNSAKF+EVD IH EIL
Sbjct: 936 QKALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKFIEVDHIHGEILRKKEEQDR 995
Query: 968 XXXXRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGTL 789
RHLF F HMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK+YATEMAKVLDP GTL
Sbjct: 996 ERAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKVYATEMAKVLDPTGTL 1055
Query: 788 FHGRVISKGDEGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKHNLIVVERY 609
F GRVIS+GD+GDPFDSDERVPKSKDLDGVLGMESAVVIIDDS+RVWPHNKHNLIVVERY
Sbjct: 1056 FAGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKHNLIVVERY 1115
Query: 608 MYFPSSRRQFGLPGPSLLEIDHDERPDAGTLASSLGVIERLHQIFFSHQSLNEVDVRNIL 429
YFP SRRQFGLPGPSLLEID DERP+ GTLASSL VIER+H+ FFSH +LN+ DVR+IL
Sbjct: 1116 TYFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHKNFFSHPNLNDADVRSIL 1175
Query: 428 AAEQRKILGGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEHVTHVVANSFGT 249
A+EQ++ILGGC+IVFSR+FPVGEANPH+HPLWQTAEQFGA CTNQID+ VTHVVANS GT
Sbjct: 1176 ASEQQRILGGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVCTNQIDDRVTHVVANSLGT 1235
Query: 248 DKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 138
DKVNWALSTGRFVVHPGWVEASALLYRRA+E DFA+K
Sbjct: 1236 DKVNWALSTGRFVVHPGWVEASALLYRRASELDFAVK 1272
>ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X3 [Vitis vinifera]
Length = 1273
Score = 755 bits (1949), Expect = 0.0
Identities = 421/737 (57%), Positives = 495/737 (67%), Gaps = 41/737 (5%)
Frame = -2
Query: 2225 VKTSAKSRDPRLRFMNSEVGG-------------APQNGFAAGSVNSRKHKAIDEPVPDE 2085
++ SAKSRDPRLR +S+ G +P+ V+SRK K+ +EP+ D
Sbjct: 562 LRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDG 621
Query: 2084 HNLKRQRNESTRS---RDAQVMPGRGGWIEDNGMVASQMNNRVQPNKNMAVGNRNL---- 1926
KRQRN T RDAQ + GGW+ED+ V QM NR Q +N + L
Sbjct: 622 PVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIENTGTDPKKLESKV 681
Query: 1925 -VGGEVGPDRRLVXXXXXXXXXNGGSASNMSTSPAPVVSLPSLLKDIAVNPTMLVELLKM 1749
V G +G D+ V G+ + + SL SLLKDIAVNP + + +
Sbjct: 682 TVTG-IGCDKPYVTV--------NGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNK 732
Query: 1748 XXXXXXXXXXXXXXAGPAVNGLSSAISPSP-------DVGQNPAAK---PQMNGPNDMGK 1599
P N + + P+ +GQ PA PQ ++ GK
Sbjct: 733 VEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVPQTGPMDESGK 792
Query: 1598 IRMKPRDPRRVLHSNMVQKSESLGSELAKSNGDLPSEVQSSKDLLTVQEQGEQAQTNTLP 1419
+RMKPRDPRR+LH+N Q+S S GSE K+N Q+Q +Q +T ++P
Sbjct: 793 VRMKPRDPRRILHANSFQRSGSSGSEQFKTNA---------------QKQEDQTETKSVP 837
Query: 1418 SQSASLPDISQQFTKNLQNLADIVSSSQASAL-PVGTQ---------NSSQLIPSKICND 1269
S S + PDISQQFTKNL+N+AD++S+SQAS++ P Q N+ ++ +D
Sbjct: 838 SHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVKATVSD 897
Query: 1268 TTEPKTVTGMCTQGETASGVIDLANPWGDVDHLLDGYDDQQKAAIQKERARRIEEQNKMF 1089
+ + T G ++ E+A+G N WGDV+HL DGYDDQQKAAIQ+ERARRIEEQ KMF
Sbjct: 898 SGDQLTANG--SKPESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQRERARRIEEQKKMF 955
Query: 1088 AERKXXXXXXXXXXXLNSAKFVEVDPIHEEILXXXXXXXXXXXXRHLFRFPHMGMWTKLR 909
+ RK LNSAKFVEVDP+H+EIL RHLFRFPHMGMWTKLR
Sbjct: 956 SARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGMWTKLR 1015
Query: 908 PGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGTLFHGRVISKGDEGDPFDSDER 729
PG+WNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKG LF GRVISKGD+GD D DER
Sbjct: 1016 PGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVLDGDER 1075
Query: 728 VPKSKDLDGVLGMESAVVIIDDSLRVWPHNKHNLIVVERYMYFPSSRRQFGLPGPSLLEI 549
VPKSKDL+GVLGMESAVVIIDDS+RVWPHNK NLIVVERY YFP SRRQFGLPGPSLLEI
Sbjct: 1076 VPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEI 1135
Query: 548 DHDERPDAGTLASSLGVIERLHQIFFSHQSLNEVDVRNILAAEQRKILGGCKIVFSRVFP 369
DHDERP+ GTLASSL VIER+HQ FFS+++L+EVDVRNILA+EQRKIL GC+IVFSRVFP
Sbjct: 1136 DHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIVFSRVFP 1195
Query: 368 VGEANPHLHPLWQTAEQFGAECTNQIDEHVTHVVANSFGTDKVNWALSTGRFVVHPGWVE 189
VGEANPHLHPLWQTAE FGA CTNQIDE VTHVVANS GTDKVNWALSTGRFVVHPGWVE
Sbjct: 1196 VGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVE 1255
Query: 188 ASALLYRRANEQDFAIK 138
ASALLYRRANEQDFAIK
Sbjct: 1256 ASALLYRRANEQDFAIK 1272
>ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X2 [Vitis vinifera]
Length = 1276
Score = 755 bits (1949), Expect = 0.0
Identities = 422/740 (57%), Positives = 496/740 (67%), Gaps = 44/740 (5%)
Frame = -2
Query: 2225 VKTSAKSRDPRLRFMNSEVGG-------------APQNGFAAGSVNSRKHKAIDEPVPDE 2085
++ SAKSRDPRLR +S+ G +P+ V+SRK K+ +EP+ D
Sbjct: 562 LRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDG 621
Query: 2084 HNLKRQRNESTRS---RDAQVMPGRGGWIEDNGMVASQMNNRVQPNKNMAVGNRNL---- 1926
KRQRN T RDAQ + GGW+ED+ V QM NR Q +N + L
Sbjct: 622 PVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIENTGTDPKKLESKV 681
Query: 1925 -VGGEVGPDRRLVXXXXXXXXXNGGSASNMSTSPAPVVSLPSLLKDIAVNPTMLVELLKM 1749
V G +G D+ V G+ + + SL SLLKDIAVNP + + +
Sbjct: 682 TVTG-IGCDKPYVTV--------NGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNK 732
Query: 1748 XXXXXXXXXXXXXXAGPAVNGLSSAISPSP-------DVGQNPAAKPQ------MNGPND 1608
P N + + P+ +GQ PA Q MN ++
Sbjct: 733 VEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVPQTGPMNPQDE 792
Query: 1607 MGKIRMKPRDPRRVLHSNMVQKSESLGSELAKSNGDLPSEVQSSKDLLTVQEQGEQAQTN 1428
GK+RMKPRDPRR+LH+N Q+S S GSE K+N Q+Q +Q +T
Sbjct: 793 SGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNA---------------QKQEDQTETK 837
Query: 1427 TLPSQSASLPDISQQFTKNLQNLADIVSSSQASAL-PVGTQ---------NSSQLIPSKI 1278
++PS S + PDISQQFTKNL+N+AD++S+SQAS++ P Q N+ ++
Sbjct: 838 SVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVKAT 897
Query: 1277 CNDTTEPKTVTGMCTQGETASGVIDLANPWGDVDHLLDGYDDQQKAAIQKERARRIEEQN 1098
+D+ + T G ++ E+A+G N WGDV+HL DGYDDQQKAAIQ+ERARRIEEQ
Sbjct: 898 VSDSGDQLTANG--SKPESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQRERARRIEEQK 955
Query: 1097 KMFAERKXXXXXXXXXXXLNSAKFVEVDPIHEEILXXXXXXXXXXXXRHLFRFPHMGMWT 918
KMF+ RK LNSAKFVEVDP+H+EIL RHLFRFPHMGMWT
Sbjct: 956 KMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGMWT 1015
Query: 917 KLRPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGTLFHGRVISKGDEGDPFDS 738
KLRPG+WNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKG LF GRVISKGD+GD D
Sbjct: 1016 KLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVLDG 1075
Query: 737 DERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKHNLIVVERYMYFPSSRRQFGLPGPSL 558
DERVPKSKDL+GVLGMESAVVIIDDS+RVWPHNK NLIVVERY YFP SRRQFGLPGPSL
Sbjct: 1076 DERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSL 1135
Query: 557 LEIDHDERPDAGTLASSLGVIERLHQIFFSHQSLNEVDVRNILAAEQRKILGGCKIVFSR 378
LEIDHDERP+ GTLASSL VIER+HQ FFS+++L+EVDVRNILA+EQRKIL GC+IVFSR
Sbjct: 1136 LEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIVFSR 1195
Query: 377 VFPVGEANPHLHPLWQTAEQFGAECTNQIDEHVTHVVANSFGTDKVNWALSTGRFVVHPG 198
VFPVGEANPHLHPLWQTAE FGA CTNQIDE VTHVVANS GTDKVNWALSTGRFVVHPG
Sbjct: 1196 VFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPG 1255
Query: 197 WVEASALLYRRANEQDFAIK 138
WVEASALLYRRANEQDFAIK
Sbjct: 1256 WVEASALLYRRANEQDFAIK 1275
>ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Jatropha curcas] gi|643708360|gb|KDP23276.1|
hypothetical protein JCGZ_23109 [Jatropha curcas]
Length = 1283
Score = 753 bits (1943), Expect = 0.0
Identities = 425/753 (56%), Positives = 492/753 (65%), Gaps = 49/753 (6%)
Frame = -2
Query: 2249 SGGSQMAPVKTSAKSRDPRLRFMNSEVGGAPQNG------------FAAGSVNSRKHKAI 2106
S GS + VK SAKSRDPRLRF+NS+ QN + G +N +K K++
Sbjct: 543 SSGSSLT-VKASAKSRDPRLRFVNSDANALDQNHVLPLVNNTPKVEYLGGPMNLKKQKSV 601
Query: 2105 DEPVPDEHNLKRQRNESTRSR---DAQVMPGRGGWIEDNGMVASQMNNRVQ--------- 1962
D+ V D +LKRQRN S + + M GGW+ED MV Q NR Q
Sbjct: 602 DDSVLDGPSLKRQRNVLEHSGGVGNVKTMIASGGWLEDTDMVRPQTMNRNQLVENSDPRR 661
Query: 1961 -------PNKNMAVGNRNLVGGEVGPDRRLVXXXXXXXXXNGGSASNMSTSPAPVVSLPS 1803
P+ + + ++ G E P G TS A SLP
Sbjct: 662 MDNGVACPSTVSGISSVSISGNEQKP------VIGTGAITEGEQIQMTGTSEA---SLPD 712
Query: 1802 LLKDIAVNPTMLVELLKMXXXXXXXXXXXXXXAGPAVNG--------------LSSAISP 1665
LLK+IAVNPTML+ LLKM + PA + + + P
Sbjct: 713 LLKNIAVNPTMLLNLLKMGQQQRSAIDAQQKPSDPAKTSKHPLNANAILGSVPVVNVVPP 772
Query: 1664 SPDVGQNPAAK---PQMNGPNDMGKIRMKPRDPRRVLHSNMVQKSESLGSELAKSNGDLP 1494
P V PA P ++GKIRMKPRDPRRVLH +QK+ ++G E K+N P
Sbjct: 773 QPSVMPRPAGTLQVPPQAAVEELGKIRMKPRDPRRVLHYQTLQKNGNMGYEQFKTNLTSP 832
Query: 1493 SEVQSSKDLLTVQEQGEQAQTNTLPSQSASLPDISQQFTKNLQNLADIVSSSQASALP-V 1317
Q +KD VQ+Q QA+T +P QS +PDIS FTK+L+N+ADIVS S AS P V
Sbjct: 833 PTDQGTKDNQIVQKQDGQAETEPVPLQSLVVPDISLPFTKSLKNIADIVSVSHASTSPTV 892
Query: 1316 GTQNSSQLIPSKICNDTTEPKTVTGMCTQGETASGVIDLANPWGDVDHLLDGYDDQQKAA 1137
+QN + I +++ +P + D WGDV+HL +GY DQQKAA
Sbjct: 893 VSQNLASQPTRTIVSNSEQPAGIGSAPCVAPVGPRPQDA---WGDVEHLFEGYSDQQKAA 949
Query: 1136 IQKERARRIEEQNKMFAERKXXXXXXXXXXXLNSAKFVEVDPIHEEILXXXXXXXXXXXX 957
IQ+ERARRIEEQ KMFA RK LNSAKFVEVDP+H+EIL
Sbjct: 950 IQRERARRIEEQKKMFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPY 1009
Query: 956 RHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGTLFHGR 777
RHLFRFPHMGMWTKLRPG+WNFLEKASKLYELHLYTMGNKLYATEMAKVLDP G LF+GR
Sbjct: 1010 RHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGVLFNGR 1069
Query: 776 VISKGDEGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKHNLIVVERYMYFP 597
VIS+GD+ D FDSDERVPKSKDL+GVLGMESAVVIIDDS+RVWPHNK NLIVVERY+YFP
Sbjct: 1070 VISRGDDTDSFDSDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFP 1129
Query: 596 SSRRQFGLPGPSLLEIDHDERPDAGTLASSLGVIERLHQIFFSHQSLNEVDVRNILAAEQ 417
SRRQFGLPGPSLLEIDHDERP+ GTLA SL VIE++HQ FF+H SL++ DVRNILA+EQ
Sbjct: 1130 CSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIEKIHQHFFTHPSLDDADVRNILASEQ 1189
Query: 416 RKILGGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEHVTHVVANSFGTDKVN 237
RKIL GC+IVFSRVFPVGEANPHLHPLWQTAEQFGA CTNQIDE VTHVVANS GTDKVN
Sbjct: 1190 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVN 1249
Query: 236 WALSTGRFVVHPGWVEASALLYRRANEQDFAIK 138
WALSTGRFVV+PGWVEASALLYRRANEQDFAIK
Sbjct: 1250 WALSTGRFVVYPGWVEASALLYRRANEQDFAIK 1282
>ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X2 [Gossypium raimondii]
Length = 1251
Score = 750 bits (1936), Expect = 0.0
Identities = 434/781 (55%), Positives = 507/781 (64%), Gaps = 52/781 (6%)
Frame = -2
Query: 2324 VNSSGGLQMSSVNSS--GAF---QMAPLNTSGGSQMAPVKTSAKSRDPRLRFMNSEVGGA 2160
V+S+ + +S SS G F P+ S S + K SAKSRDPRLRF NS V
Sbjct: 477 VSSAPHIDSASSTSSMQGQFTTQNATPVTVSSASNILS-KASAKSRDPRLRFANSNVSAL 535
Query: 2159 PQNGF----------AAGSVNSRKHKAIDEPVPDEHNLKRQRNESTRS--RDAQVMPGRG 2016
N +G ++ RK K+ +EPV D KRQ+NE RD Q + G G
Sbjct: 536 DLNQRPLHNASKVPPVSGIMDPRKKKSTEEPVLDGPAPKRQKNELENFGVRDVQAVSGNG 595
Query: 2015 GWIEDNGMVASQMNNRVQPNKNMAVGNRNLVGGEVGPDRRLVXXXXXXXXXNGGSASNMS 1836
GW+ED SQ+ NR Q + + +R + G + MS
Sbjct: 596 GWLEDTDNCESQITNRNQTMETLDSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTGMS 655
Query: 1835 TSPAPVVSLPSLLKDIAVNPTMLVELLKMXXXXXXXXXXXXXXAGPAVNGLSSAIS---- 1668
SLP+LLKDIAVNPTML+ +LKM P N L S
Sbjct: 656 NP-----SLPALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVL 710
Query: 1667 ---------PSPDVGQNPAA------KPQMN--GP--NDMGKIRMKPRDPRRVLHSNMVQ 1545
PSP V P++ KP N GP ++ KIRMKPRDPRRVLH N++Q
Sbjct: 711 GVIPPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLDESCKIRMKPRDPRRVLHGNVLQ 770
Query: 1544 KSESLGSELAKSNGDLP-SEVQSSKDLLTVQEQGE-QAQTNTLPSQSASLPDISQQFTKN 1371
KS S+G + K+NG P S Q SKD + Q+Q E Q + + Q PDI+QQFT++
Sbjct: 771 KSGSVGPDQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQS 830
Query: 1370 LQNLADIVSSSQASA-LPVGTQNSSQLIPSKICNDTTEPKTVTGMCTQGETASGVIDLA- 1197
L+N+A ++S Q+ A LP +QN P ++ ++T + T +T +G A
Sbjct: 831 LKNIAGMMSGPQSFAGLPAVSQNLVSQ-PIQVKSETADKNTKGSNSEDQQTGTGTAPEAG 889
Query: 1196 --------NPWGDVDHLLDGYDDQQKAAIQKERARRIEEQNKMFAERKXXXXXXXXXXXL 1041
N WGDV+HL + YDD+QKAAIQ+ERARRIEEQ KMFA RK L
Sbjct: 890 VTCPPPSQNAWGDVEHLFEKYDDRQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLL 949
Query: 1040 NSAKFVEVDPIHEEILXXXXXXXXXXXXRHLFRFPHMGMWTKLRPGVWNFLEKASKLYEL 861
NSAKF+EVDP+HEEIL RHLFRF HMGMWTKLRPG+WNFLEKASKLYEL
Sbjct: 950 NSAKFIEVDPVHEEILRKKEEQDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKASKLYEL 1009
Query: 860 HLYTMGNKLYATEMAKVLDPKGTLFHGRVISKGDEGDPFDSDERVPKSKDLDGVLGMESA 681
HLYTMGNKLYATEMAKVLDPKG LF GRVIS+GD+GDPFD DERVP+SKDL+GVLGMES+
Sbjct: 1010 HLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESS 1069
Query: 680 VVIIDDSLRVWPHNKHNLIVVERYMYFPSSRRQFGLPGPSLLEIDHDERPDAGTLASSLG 501
VVIIDDS+RVWPHNK NLIVVERY YFP SRRQFGL GPSLLEIDHDERP+ GTLASSL
Sbjct: 1070 VVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLA 1129
Query: 500 VIERLHQIFFSHQSLNEVDVRNILAAEQRKILGGCKIVFSRVFPVGEANPHLHPLWQTAE 321
VIER+HQ FFSHQ+L+++DVRNILA EQRKIL GC+IVFSRVFPVGEANPHLHPLWQTAE
Sbjct: 1130 VIERIHQNFFSHQNLDDLDVRNILATEQRKILSGCRIVFSRVFPVGEANPHLHPLWQTAE 1189
Query: 320 QFGAECTNQIDEHVTHVVANSFGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 141
QFGA CTNQIDEHVTHVVANS GTDKVNWALSTG+FVVHPGWVEASALLYRRANE DFAI
Sbjct: 1190 QFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEHDFAI 1249
Query: 140 K 138
K
Sbjct: 1250 K 1250
>gb|KJB77193.1| hypothetical protein B456_012G125200 [Gossypium raimondii]
Length = 982
Score = 750 bits (1936), Expect = 0.0
Identities = 434/781 (55%), Positives = 507/781 (64%), Gaps = 52/781 (6%)
Frame = -2
Query: 2324 VNSSGGLQMSSVNSS--GAF---QMAPLNTSGGSQMAPVKTSAKSRDPRLRFMNSEVGGA 2160
V+S+ + +S SS G F P+ S S + K SAKSRDPRLRF NS V
Sbjct: 208 VSSAPHIDSASSTSSMQGQFTTQNATPVTVSSASNILS-KASAKSRDPRLRFANSNVSAL 266
Query: 2159 PQNGF----------AAGSVNSRKHKAIDEPVPDEHNLKRQRNESTRS--RDAQVMPGRG 2016
N +G ++ RK K+ +EPV D KRQ+NE RD Q + G G
Sbjct: 267 DLNQRPLHNASKVPPVSGIMDPRKKKSTEEPVLDGPAPKRQKNELENFGVRDVQAVSGNG 326
Query: 2015 GWIEDNGMVASQMNNRVQPNKNMAVGNRNLVGGEVGPDRRLVXXXXXXXXXNGGSASNMS 1836
GW+ED SQ+ NR Q + + +R + G + MS
Sbjct: 327 GWLEDTDNCESQITNRNQTMETLDSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTGMS 386
Query: 1835 TSPAPVVSLPSLLKDIAVNPTMLVELLKMXXXXXXXXXXXXXXAGPAVNGLSSAIS---- 1668
SLP+LLKDIAVNPTML+ +LKM P N L S
Sbjct: 387 NP-----SLPALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVL 441
Query: 1667 ---------PSPDVGQNPAA------KPQMN--GP--NDMGKIRMKPRDPRRVLHSNMVQ 1545
PSP V P++ KP N GP ++ KIRMKPRDPRRVLH N++Q
Sbjct: 442 GVIPPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLDESCKIRMKPRDPRRVLHGNVLQ 501
Query: 1544 KSESLGSELAKSNGDLP-SEVQSSKDLLTVQEQGE-QAQTNTLPSQSASLPDISQQFTKN 1371
KS S+G + K+NG P S Q SKD + Q+Q E Q + + Q PDI+QQFT++
Sbjct: 502 KSGSVGPDQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQS 561
Query: 1370 LQNLADIVSSSQASA-LPVGTQNSSQLIPSKICNDTTEPKTVTGMCTQGETASGVIDLA- 1197
L+N+A ++S Q+ A LP +QN P ++ ++T + T +T +G A
Sbjct: 562 LKNIAGMMSGPQSFAGLPAVSQNLVSQ-PIQVKSETADKNTKGSNSEDQQTGTGTAPEAG 620
Query: 1196 --------NPWGDVDHLLDGYDDQQKAAIQKERARRIEEQNKMFAERKXXXXXXXXXXXL 1041
N WGDV+HL + YDD+QKAAIQ+ERARRIEEQ KMFA RK L
Sbjct: 621 VTCPPPSQNAWGDVEHLFEKYDDRQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLL 680
Query: 1040 NSAKFVEVDPIHEEILXXXXXXXXXXXXRHLFRFPHMGMWTKLRPGVWNFLEKASKLYEL 861
NSAKF+EVDP+HEEIL RHLFRF HMGMWTKLRPG+WNFLEKASKLYEL
Sbjct: 681 NSAKFIEVDPVHEEILRKKEEQDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKASKLYEL 740
Query: 860 HLYTMGNKLYATEMAKVLDPKGTLFHGRVISKGDEGDPFDSDERVPKSKDLDGVLGMESA 681
HLYTMGNKLYATEMAKVLDPKG LF GRVIS+GD+GDPFD DERVP+SKDL+GVLGMES+
Sbjct: 741 HLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESS 800
Query: 680 VVIIDDSLRVWPHNKHNLIVVERYMYFPSSRRQFGLPGPSLLEIDHDERPDAGTLASSLG 501
VVIIDDS+RVWPHNK NLIVVERY YFP SRRQFGL GPSLLEIDHDERP+ GTLASSL
Sbjct: 801 VVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLA 860
Query: 500 VIERLHQIFFSHQSLNEVDVRNILAAEQRKILGGCKIVFSRVFPVGEANPHLHPLWQTAE 321
VIER+HQ FFSHQ+L+++DVRNILA EQRKIL GC+IVFSRVFPVGEANPHLHPLWQTAE
Sbjct: 861 VIERIHQNFFSHQNLDDLDVRNILATEQRKILSGCRIVFSRVFPVGEANPHLHPLWQTAE 920
Query: 320 QFGAECTNQIDEHVTHVVANSFGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 141
QFGA CTNQIDEHVTHVVANS GTDKVNWALSTG+FVVHPGWVEASALLYRRANE DFAI
Sbjct: 921 QFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEHDFAI 980
Query: 140 K 138
K
Sbjct: 981 K 981
>gb|KJB77192.1| hypothetical protein B456_012G125200 [Gossypium raimondii]
Length = 1033
Score = 750 bits (1936), Expect = 0.0
Identities = 434/781 (55%), Positives = 507/781 (64%), Gaps = 52/781 (6%)
Frame = -2
Query: 2324 VNSSGGLQMSSVNSS--GAF---QMAPLNTSGGSQMAPVKTSAKSRDPRLRFMNSEVGGA 2160
V+S+ + +S SS G F P+ S S + K SAKSRDPRLRF NS V
Sbjct: 259 VSSAPHIDSASSTSSMQGQFTTQNATPVTVSSASNILS-KASAKSRDPRLRFANSNVSAL 317
Query: 2159 PQNGF----------AAGSVNSRKHKAIDEPVPDEHNLKRQRNESTRS--RDAQVMPGRG 2016
N +G ++ RK K+ +EPV D KRQ+NE RD Q + G G
Sbjct: 318 DLNQRPLHNASKVPPVSGIMDPRKKKSTEEPVLDGPAPKRQKNELENFGVRDVQAVSGNG 377
Query: 2015 GWIEDNGMVASQMNNRVQPNKNMAVGNRNLVGGEVGPDRRLVXXXXXXXXXNGGSASNMS 1836
GW+ED SQ+ NR Q + + +R + G + MS
Sbjct: 378 GWLEDTDNCESQITNRNQTMETLDSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTGMS 437
Query: 1835 TSPAPVVSLPSLLKDIAVNPTMLVELLKMXXXXXXXXXXXXXXAGPAVNGLSSAIS---- 1668
SLP+LLKDIAVNPTML+ +LKM P N L S
Sbjct: 438 NP-----SLPALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVL 492
Query: 1667 ---------PSPDVGQNPAA------KPQMN--GP--NDMGKIRMKPRDPRRVLHSNMVQ 1545
PSP V P++ KP N GP ++ KIRMKPRDPRRVLH N++Q
Sbjct: 493 GVIPPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLDESCKIRMKPRDPRRVLHGNVLQ 552
Query: 1544 KSESLGSELAKSNGDLP-SEVQSSKDLLTVQEQGE-QAQTNTLPSQSASLPDISQQFTKN 1371
KS S+G + K+NG P S Q SKD + Q+Q E Q + + Q PDI+QQFT++
Sbjct: 553 KSGSVGPDQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQS 612
Query: 1370 LQNLADIVSSSQASA-LPVGTQNSSQLIPSKICNDTTEPKTVTGMCTQGETASGVIDLA- 1197
L+N+A ++S Q+ A LP +QN P ++ ++T + T +T +G A
Sbjct: 613 LKNIAGMMSGPQSFAGLPAVSQNLVSQ-PIQVKSETADKNTKGSNSEDQQTGTGTAPEAG 671
Query: 1196 --------NPWGDVDHLLDGYDDQQKAAIQKERARRIEEQNKMFAERKXXXXXXXXXXXL 1041
N WGDV+HL + YDD+QKAAIQ+ERARRIEEQ KMFA RK L
Sbjct: 672 VTCPPPSQNAWGDVEHLFEKYDDRQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLL 731
Query: 1040 NSAKFVEVDPIHEEILXXXXXXXXXXXXRHLFRFPHMGMWTKLRPGVWNFLEKASKLYEL 861
NSAKF+EVDP+HEEIL RHLFRF HMGMWTKLRPG+WNFLEKASKLYEL
Sbjct: 732 NSAKFIEVDPVHEEILRKKEEQDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKASKLYEL 791
Query: 860 HLYTMGNKLYATEMAKVLDPKGTLFHGRVISKGDEGDPFDSDERVPKSKDLDGVLGMESA 681
HLYTMGNKLYATEMAKVLDPKG LF GRVIS+GD+GDPFD DERVP+SKDL+GVLGMES+
Sbjct: 792 HLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESS 851
Query: 680 VVIIDDSLRVWPHNKHNLIVVERYMYFPSSRRQFGLPGPSLLEIDHDERPDAGTLASSLG 501
VVIIDDS+RVWPHNK NLIVVERY YFP SRRQFGL GPSLLEIDHDERP+ GTLASSL
Sbjct: 852 VVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLA 911
Query: 500 VIERLHQIFFSHQSLNEVDVRNILAAEQRKILGGCKIVFSRVFPVGEANPHLHPLWQTAE 321
VIER+HQ FFSHQ+L+++DVRNILA EQRKIL GC+IVFSRVFPVGEANPHLHPLWQTAE
Sbjct: 912 VIERIHQNFFSHQNLDDLDVRNILATEQRKILSGCRIVFSRVFPVGEANPHLHPLWQTAE 971
Query: 320 QFGAECTNQIDEHVTHVVANSFGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 141
QFGA CTNQIDEHVTHVVANS GTDKVNWALSTG+FVVHPGWVEASALLYRRANE DFAI
Sbjct: 972 QFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEHDFAI 1031
Query: 140 K 138
K
Sbjct: 1032 K 1032
>ref|XP_012459417.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X1 [Gossypium raimondii]
gi|763810289|gb|KJB77191.1| hypothetical protein
B456_012G125200 [Gossypium raimondii]
Length = 1272
Score = 750 bits (1936), Expect = 0.0
Identities = 434/781 (55%), Positives = 507/781 (64%), Gaps = 52/781 (6%)
Frame = -2
Query: 2324 VNSSGGLQMSSVNSS--GAF---QMAPLNTSGGSQMAPVKTSAKSRDPRLRFMNSEVGGA 2160
V+S+ + +S SS G F P+ S S + K SAKSRDPRLRF NS V
Sbjct: 498 VSSAPHIDSASSTSSMQGQFTTQNATPVTVSSASNILS-KASAKSRDPRLRFANSNVSAL 556
Query: 2159 PQNGF----------AAGSVNSRKHKAIDEPVPDEHNLKRQRNESTRS--RDAQVMPGRG 2016
N +G ++ RK K+ +EPV D KRQ+NE RD Q + G G
Sbjct: 557 DLNQRPLHNASKVPPVSGIMDPRKKKSTEEPVLDGPAPKRQKNELENFGVRDVQAVSGNG 616
Query: 2015 GWIEDNGMVASQMNNRVQPNKNMAVGNRNLVGGEVGPDRRLVXXXXXXXXXNGGSASNMS 1836
GW+ED SQ+ NR Q + + +R + G + MS
Sbjct: 617 GWLEDTDNCESQITNRNQTMETLDSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTGMS 676
Query: 1835 TSPAPVVSLPSLLKDIAVNPTMLVELLKMXXXXXXXXXXXXXXAGPAVNGLSSAIS---- 1668
SLP+LLKDIAVNPTML+ +LKM P N L S
Sbjct: 677 NP-----SLPALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVL 731
Query: 1667 ---------PSPDVGQNPAA------KPQMN--GP--NDMGKIRMKPRDPRRVLHSNMVQ 1545
PSP V P++ KP N GP ++ KIRMKPRDPRRVLH N++Q
Sbjct: 732 GVIPPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLDESCKIRMKPRDPRRVLHGNVLQ 791
Query: 1544 KSESLGSELAKSNGDLP-SEVQSSKDLLTVQEQGE-QAQTNTLPSQSASLPDISQQFTKN 1371
KS S+G + K+NG P S Q SKD + Q+Q E Q + + Q PDI+QQFT++
Sbjct: 792 KSGSVGPDQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQS 851
Query: 1370 LQNLADIVSSSQASA-LPVGTQNSSQLIPSKICNDTTEPKTVTGMCTQGETASGVIDLA- 1197
L+N+A ++S Q+ A LP +QN P ++ ++T + T +T +G A
Sbjct: 852 LKNIAGMMSGPQSFAGLPAVSQNLVSQ-PIQVKSETADKNTKGSNSEDQQTGTGTAPEAG 910
Query: 1196 --------NPWGDVDHLLDGYDDQQKAAIQKERARRIEEQNKMFAERKXXXXXXXXXXXL 1041
N WGDV+HL + YDD+QKAAIQ+ERARRIEEQ KMFA RK L
Sbjct: 911 VTCPPPSQNAWGDVEHLFEKYDDRQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLL 970
Query: 1040 NSAKFVEVDPIHEEILXXXXXXXXXXXXRHLFRFPHMGMWTKLRPGVWNFLEKASKLYEL 861
NSAKF+EVDP+HEEIL RHLFRF HMGMWTKLRPG+WNFLEKASKLYEL
Sbjct: 971 NSAKFIEVDPVHEEILRKKEEQDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKASKLYEL 1030
Query: 860 HLYTMGNKLYATEMAKVLDPKGTLFHGRVISKGDEGDPFDSDERVPKSKDLDGVLGMESA 681
HLYTMGNKLYATEMAKVLDPKG LF GRVIS+GD+GDPFD DERVP+SKDL+GVLGMES+
Sbjct: 1031 HLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESS 1090
Query: 680 VVIIDDSLRVWPHNKHNLIVVERYMYFPSSRRQFGLPGPSLLEIDHDERPDAGTLASSLG 501
VVIIDDS+RVWPHNK NLIVVERY YFP SRRQFGL GPSLLEIDHDERP+ GTLASSL
Sbjct: 1091 VVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLA 1150
Query: 500 VIERLHQIFFSHQSLNEVDVRNILAAEQRKILGGCKIVFSRVFPVGEANPHLHPLWQTAE 321
VIER+HQ FFSHQ+L+++DVRNILA EQRKIL GC+IVFSRVFPVGEANPHLHPLWQTAE
Sbjct: 1151 VIERIHQNFFSHQNLDDLDVRNILATEQRKILSGCRIVFSRVFPVGEANPHLHPLWQTAE 1210
Query: 320 QFGAECTNQIDEHVTHVVANSFGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 141
QFGA CTNQIDEHVTHVVANS GTDKVNWALSTG+FVVHPGWVEASALLYRRANE DFAI
Sbjct: 1211 QFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEHDFAI 1270
Query: 140 K 138
K
Sbjct: 1271 K 1271
>ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X1 [Vitis vinifera]
Length = 1285
Score = 750 bits (1936), Expect = 0.0
Identities = 421/749 (56%), Positives = 496/749 (66%), Gaps = 53/749 (7%)
Frame = -2
Query: 2225 VKTSAKSRDPRLRFMNSEVGG-------------APQNGFAAGSVNSRKHKAIDEPVPDE 2085
++ SAKSRDPRLR +S+ G +P+ V+SRK K+ +EP+ D
Sbjct: 562 LRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDG 621
Query: 2084 HNLKRQRNESTRS---RDAQVMPGRGGWIEDNGMVASQMNNRVQPNKNMAVGNRNL---- 1926
KRQRN T RDAQ + GGW+ED+ V QM NR Q +N + L
Sbjct: 622 PVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIENTGTDPKKLESKV 681
Query: 1925 -VGGEVGPDRRLVXXXXXXXXXNGGSASNMSTSPAPVVSLPSLLKDIAVNPTMLVELLKM 1749
V G +G D+ V G+ + + SL SLLKDIAVNP + + +
Sbjct: 682 TVTG-IGCDKPYVTV--------NGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNK 732
Query: 1748 XXXXXXXXXXXXXXAGPAVNGLSSAISPSP-------DVGQNPAAKPQM----------- 1623
P N + + P+ +GQ PA Q+
Sbjct: 733 VEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVPQTGPMLVTSC 792
Query: 1622 ----NGPNDMGKIRMKPRDPRRVLHSNMVQKSESLGSELAKSNGDLPSEVQSSKDLLTVQ 1455
N ++ GK+RMKPRDPRR+LH+N Q+S S GSE K+N Q
Sbjct: 793 NNAQNPQDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNA---------------Q 837
Query: 1454 EQGEQAQTNTLPSQSASLPDISQQFTKNLQNLADIVSSSQASAL-PVGTQ---------N 1305
+Q +Q +T ++PS S + PDISQQFTKNL+N+AD++S+SQAS++ P Q N
Sbjct: 838 KQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVN 897
Query: 1304 SSQLIPSKICNDTTEPKTVTGMCTQGETASGVIDLANPWGDVDHLLDGYDDQQKAAIQKE 1125
+ ++ +D+ + T G ++ E+A+G N WGDV+HL DGYDDQQKAAIQ+E
Sbjct: 898 TDRMDVKATVSDSGDQLTANG--SKPESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQRE 955
Query: 1124 RARRIEEQNKMFAERKXXXXXXXXXXXLNSAKFVEVDPIHEEILXXXXXXXXXXXXRHLF 945
RARRIEEQ KMF+ RK LNSAKFVEVDP+H+EIL RHLF
Sbjct: 956 RARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLF 1015
Query: 944 RFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGTLFHGRVISK 765
RFPHMGMWTKLRPG+WNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKG LF GRVISK
Sbjct: 1016 RFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISK 1075
Query: 764 GDEGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKHNLIVVERYMYFPSSRR 585
GD+GD D DERVPKSKDL+GVLGMESAVVIIDDS+RVWPHNK NLIVVERY YFP SRR
Sbjct: 1076 GDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR 1135
Query: 584 QFGLPGPSLLEIDHDERPDAGTLASSLGVIERLHQIFFSHQSLNEVDVRNILAAEQRKIL 405
QFGLPGPSLLEIDHDERP+ GTLASSL VIER+HQ FFS+++L+EVDVRNILA+EQRKIL
Sbjct: 1136 QFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKIL 1195
Query: 404 GGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEHVTHVVANSFGTDKVNWALS 225
GC+IVFSRVFPVGEANPHLHPLWQTAE FGA CTNQIDE VTHVVANS GTDKVNWALS
Sbjct: 1196 AGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALS 1255
Query: 224 TGRFVVHPGWVEASALLYRRANEQDFAIK 138
TGRFVVHPGWVEASALLYRRANEQDFAIK
Sbjct: 1256 TGRFVVHPGWVEASALLYRRANEQDFAIK 1284
>ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 3-like [Oryza brachyantha]
Length = 1267
Score = 750 bits (1936), Expect = 0.0
Identities = 425/758 (56%), Positives = 500/758 (65%), Gaps = 54/758 (7%)
Frame = -2
Query: 2249 SGGSQMAPVKTSAKSRDPRLRFMNSEVGGA-------------PQNGFAAG---SVNSRK 2118
SG + M +K +AKSRDPRLRF+N + G P G +NSRK
Sbjct: 520 SGSNHM--LKATAKSRDPRLRFLNRDAGVVADANRRLNFAEPNPSKDRTMGVGVPINSRK 577
Query: 2117 HKAIDEPVPDEHNLKRQRNESTRSRDAQVMPGRGGWIEDNGMVASQMNNRVQPNKNMAVG 1938
HK +DEP+ DE+ LKR R + RD GRGGW +D V+S ++ QPN+N +G
Sbjct: 578 HKTVDEPLVDENMLKRSRGGNGNPRDVLTPAGRGGWAKDGVNVSSYSSDGFQPNQNTRLG 637
Query: 1937 NRNLVGGEVGPDRRLVXXXXXXXXXNG---------GSASNMSTSPAPVVSLPSLLKDIA 1785
N V D LV +G + S+ TS AP VSLP++LKDIA
Sbjct: 638 NSTTGSHNVRTDSTLVSNTNNMTNSSGINTGVVQAPQTNSSPQTSSAPSVSLPAMLKDIA 697
Query: 1784 VNPTMLVELLKMXXXXXXXXXXXXXXAGPA----------VNGLSSA-----ISPSPDV- 1653
VNPTML++ ++M V LS A +P P V
Sbjct: 698 VNPTMLMQWIQMEQQKMSATEPLQKVTASVGMTSNETAGMVLPLSCASKTTEAAPVPSVR 757
Query: 1652 GQNPAAKPQMNGPNDMGKIRMKPRDPRRVLHSNMVQKSES---LGSELAKSNGDLPSEVQ 1482
Q P ++ ND G IRMKPRDPRR+LHSN+ QK+++ +G E AK NG + Q
Sbjct: 758 SQVPMQTAAVHSQNDAGVIRMKPRDPRRILHSNIAQKNDTVPPVGVEQAKINGTALPDSQ 817
Query: 1481 SSKD-LLTVQEQGEQAQTNTLPSQSASLPDISQQFTKNLQNLADIVSSSQASALPVGTQN 1305
SKD LL ++Q EQ QT+ LPSQ + ++Q T N A+ VS+SQ +A +
Sbjct: 818 GSKDHLLNHEQQAEQLQTSALPSQPVT--PSARQVTMN----ANPVSNSQLAATALMPHG 871
Query: 1304 SSQLIPSKICNDTTEPKTVTGM---------CTQGETASGVIDLANPWGDVDHLLDGYDD 1152
S+Q S + + +P+ G T TA + A+PWGDVDHLLDGYDD
Sbjct: 872 STQQTSSSV--NKADPRLTAGQNETNDDAVTSTGPLTAPDAVLPASPWGDVDHLLDGYDD 929
Query: 1151 QQKAAIQKERARRIEEQNKMFAERKXXXXXXXXXXXLNSAKFVEVDPIHEEILXXXXXXX 972
QQKA IQKERARRI EQ KMFA +K LNSAKF EV+PIHEEIL
Sbjct: 930 QQKALIQKERARRIMEQQKMFAAQKLCLVLDLDHTLLNSAKFAEVEPIHEEILRKKEEQD 989
Query: 971 XXXXXRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGT 792
RHLF F HMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK+YATEMA+VLDP GT
Sbjct: 990 RERADRHLFCFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKIYATEMARVLDPTGT 1049
Query: 791 LFHGRVISKGDEGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKHNLIVVER 612
LF GRVIS+GD+GD DSDERVPKSKDLDGVLGMESAVVIIDDS+RVWPHNKHNLIVVER
Sbjct: 1050 LFAGRVISRGDDGDTLDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKHNLIVVER 1109
Query: 611 YMYFPSSRRQFGLPGPSLLEIDHDERPDAGTLASSLGVIERLHQIFFSHQSLNEVDVRNI 432
Y YFP SRRQFGLPGPSLLEID DERP+ GTLASSL VIER+HQ FF+H +LN+ DVR+I
Sbjct: 1110 YTYFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHQNFFTHPNLNDADVRSI 1169
Query: 431 LAAEQRKILGGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEHVTHVVANSFG 252
LA+EQ++ILGGC+IVFSR+FPVGEANPH+HPLWQTAEQFGA CTNQID+ VTHVVANS G
Sbjct: 1170 LASEQQRILGGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVCTNQIDDRVTHVVANSLG 1229
Query: 251 TDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 138
TDKVNWALSTGRFVVHPGWVEASALLYRRA+E DFA+K
Sbjct: 1230 TDKVNWALSTGRFVVHPGWVEASALLYRRASELDFAVK 1267
>gb|KDO83166.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
Length = 1218
Score = 748 bits (1932), Expect = 0.0
Identities = 425/750 (56%), Positives = 503/750 (67%), Gaps = 27/750 (3%)
Frame = -2
Query: 2306 LQMSSVNS-SGAFQMAPLNTSGGSQMAP---VKTSAKSRDPRLRFMNSE----------- 2172
+ +SSV + + A AP ++ + P VK KSRDPRLRF +S
Sbjct: 489 MDISSVQALTTANNSAPASSGYNPVVKPNPVVKAPIKSRDPRLRFASSNALNLNHQPAPI 548
Query: 2171 VGGAPQNGFAAGSVNSRKHKAIDEPVPDEHNLKRQRNESTRS---RDAQVMPGRGGWIED 2001
+ AP+ ++SRK K ++EPV D LKRQRN S RD + + G GGW+ED
Sbjct: 549 LHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLED 608
Query: 2000 NGMVASQMNNRVQPNKNMAVGNRNLVGGEVGPDRRLVXXXXXXXXXNGGSASNMSTSPAP 1821
M Q+ NR + +R L G P G+ +T+P+
Sbjct: 609 TDMFEPQIMNRNLLVDSAESNSRKLDNGATSP-----ITSGTPNVVVSGNEPAPATTPST 663
Query: 1820 VVSLPSLLKDIAVNPTMLVELLKMXXXXXXXXXXXXXXAGPAVNGLSSAISPSPDVGQNP 1641
VSLP+LLKDIAVNPTML+ +LKM ++N + I P
Sbjct: 664 TVSLPALLKDIAVNPTMLLNILKMGQQQKLAADAQQKSNDSSMNTMHPPI---------P 714
Query: 1640 AAKPQMNGPNDMGKIRMKPRDPRRVLHSNMVQKSESLGSELAKSNGDLPSEVQSSKDLLT 1461
++ P P+++GK+RMKPRDPRRVLH N +Q+S SLG E K++G Q SK+ L
Sbjct: 715 SSIP----PDELGKVRMKPRDPRRVLHGNALQRSGSLGPEF-KTDGPSAPCTQGSKENLN 769
Query: 1460 VQEQGEQAQTNTLPSQSASLPDISQQFTKNLQNLADIVSSSQA-SALPVGTQNSSQLIPS 1284
Q+Q + + SQS PDI+QQFTKNL+++AD +S SQ ++ P+ +QNS + P
Sbjct: 770 FQKQLGAPEAKPVLSQSVLQPDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNSP-IQPG 828
Query: 1283 KICNDTTEPKTVTGMCTQGETASGVIDLANP--------WGDVDHLLDGYDDQQKAAIQK 1128
+I + K V +T +G A P WGDV+HL +GYDDQQKAAIQK
Sbjct: 829 QI-KSGADMKAVVTNHDDKQTGTGSGPEAGPVGAHPQSAWGDVEHLFEGYDDQQKAAIQK 887
Query: 1127 ERARRIEEQNKMFAERKXXXXXXXXXXXLNSAKFVEVDPIHEEILXXXXXXXXXXXXRHL 948
ER RR+EEQ KMF+ RK LNSAKF EVDP+H+EIL RHL
Sbjct: 888 ERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHL 947
Query: 947 FRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGTLFHGRVIS 768
FRFPHMGMWTKLRPG+W FLE+ASKL+E+HLYTMGNKLYATEMAKVLDPKG LF GRVIS
Sbjct: 948 FRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVIS 1007
Query: 767 KGDEGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKHNLIVVERYMYFPSSR 588
+GD+GDPFD DERVPKSKDL+GVLGMESAVVIIDDS+RVWPHNK NLIVVERY YFP SR
Sbjct: 1008 RGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSR 1067
Query: 587 RQFGLPGPSLLEIDHDERPDAGTLASSLGVIERLHQIFFSHQSLNEVDVRNILAAEQRKI 408
RQFGL GPSLLEIDHDER + GTLASSLGVIERLH+IFFSHQSL++VDVRNILAAEQRKI
Sbjct: 1068 RQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQRKI 1127
Query: 407 LGGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEHVTHVVANSFGTDKVNWAL 228
L GC+IVFSRVFPVGEANPHLHPLWQTAEQFGA CT ID+ VTHVVANS GTDKVNWAL
Sbjct: 1128 LAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWAL 1187
Query: 227 STGRFVVHPGWVEASALLYRRANEQDFAIK 138
STGRFVVHPGWVEASALLYRRANEQDFAIK
Sbjct: 1188 STGRFVVHPGWVEASALLYRRANEQDFAIK 1217