BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00002146
         (3509 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010905752.1| PREDICTED: DNA-directed RNA polymerase III s...  1868   0.0  
ref|XP_009385728.1| PREDICTED: DNA-directed RNA polymerase III s...  1867   0.0  
ref|XP_004951189.1| PREDICTED: DNA-directed RNA polymerase III s...  1761   0.0  
ref|NP_001050323.1| Os03g0403100 [Oryza sativa Japonica Group] g...  1748   0.0  
gb|AAP03366.1| putative RNA polymerase III [Oryza sativa Japonic...  1748   0.0  
ref|XP_006656544.1| PREDICTED: DNA-directed RNA polymerase III s...  1741   0.0  
ref|XP_003570586.1| PREDICTED: DNA-directed RNA polymerase III s...  1735   0.0  
ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III s...  1713   0.0  
ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III s...  1708   0.0  
ref|XP_008648749.1| PREDICTED: DNA-directed RNA polymerase III s...  1704   0.0  
ref|XP_002436683.1| hypothetical protein SORBIDRAFT_10g006995 [S...  1697   0.0  
ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III s...  1680   0.0  
ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III s...  1672   0.0  
ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III s...  1666   0.0  
ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III s...  1666   0.0  
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...  1666   0.0  
ref|XP_004141655.2| PREDICTED: DNA-directed RNA polymerase III s...  1665   0.0  
ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III s...  1663   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1663   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1662   0.0  

>ref|XP_010905752.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Elaeis
            guineensis]
          Length = 1149

 Score = 1868 bits (4838), Expect = 0.0
 Identities = 923/1133 (81%), Positives = 1022/1133 (90%), Gaps = 11/1133 (0%)
 Frame = -1

Query: 3368 ADYKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHD 3189
            A  K LTAPVK+AVDKF LLPAFLKVRGLVK+HIDSF+YFINH I KI++AN RLVCR+D
Sbjct: 9    ASLKILTAPVKSAVDKFQLLPAFLKVRGLVKQHIDSFNYFINHDIKKIMKANDRLVCRYD 68

Query: 3188 PTLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEK 3009
            P LYL YT IY+ +PS+ MD   E LTP +CRLSDRTY API V++E+TKGNQANK  E 
Sbjct: 69   PDLYLRYTNIYVEEPSVDMDFSVEKLTPHLCRLSDRTYAAPIKVDIEYTKGNQANKKPEI 128

Query: 3008 REGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKN 2829
            + G++IG++PIMLRS  CVL GKDE ELAKLGECPLDPGGYFIV+G EKVILIQEQLSKN
Sbjct: 129  KRGLVIGRLPIMLRSCRCVLSGKDEAELAKLGECPLDPGGYFIVKGTEKVILIQEQLSKN 188

Query: 2828 RIIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIES 2649
            RIIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQF KPIPIM+I++AMG+ES
Sbjct: 189  RIIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFIKPIPIMVIMRAMGMES 248

Query: 2648 DQEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRA 2469
            DQEIVQM+GRDPRYG LLLPS+QEC+++RIYTQQQAL+YLDG+VG+A SAR+G +KEG A
Sbjct: 249  DQEIVQMVGRDPRYGTLLLPSLQECASERIYTQQQALEYLDGKVGNANSARSGNRKEGLA 308

Query: 2468 RNIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQL 2289
            + I+ DVFLANVPV+ GNF+PKC+YA+VMLRRMMDAILN+DT DDKDYVGNKR ELSGQL
Sbjct: 309  KAILLDVFLANVPVNQGNFKPKCIYASVMLRRMMDAILNTDTFDDKDYVGNKRLELSGQL 368

Query: 2288 ISLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWD 2109
            ISLLFEDLFK+MNS  ++ +N AYE A+R++ LDF   I++    +T GLE++++TGNWD
Sbjct: 369  ISLLFEDLFKSMNSFALELLNRAYEHASRSSPLDFAHYIKQD--YITNGLEKSIATGNWD 426

Query: 2108 LKRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTP 1929
            +KRF+MHRKGVSQ L RLSFI ALG MTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 427  VKRFKMHRKGVSQVLSRLSFIGALGSMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTP 486

Query: 1928 EGEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLI 1749
            EGEACGLTKNLALMTHVTTDE+EGPLISLCHSLGVEDLA+LS EELHAP SFLVIFNGLI
Sbjct: 487  EGEACGLTKNLALMTHVTTDEEEGPLISLCHSLGVEDLAFLSAEELHAPGSFLVIFNGLI 546

Query: 1748 LGKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISR 1569
            LGKHRQPQRFANAMRKLRR+GKIGEFVSIFVN++Q CVYVASDGGRVCRPLVIAD+GISR
Sbjct: 547  LGKHRQPQRFANAMRKLRRSGKIGEFVSIFVNEKQRCVYVASDGGRVCRPLVIADKGISR 606

Query: 1568 IKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKR- 1392
            IKEHHMKELRDGVRSFDDFLRDGL+EYLDVNEENNA+I+LYE+++     EK+  D KR 
Sbjct: 607  IKEHHMKELRDGVRSFDDFLRDGLVEYLDVNEENNALIALYEYENDKDDSEKDNDDVKRS 666

Query: 1391 -ITHIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLL 1215
             ITHIEIEPFTILG+ AGLIPYPHHNQSPRNTYQCAMGKQAMGNI YNQL RAD+L+YLL
Sbjct: 667  SITHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIGYNQLSRADTLLYLL 726

Query: 1214 VYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITL 1035
            VYPQRPLLTTK+IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRC+ +
Sbjct: 727  VYPQRPLLTTKSIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCVAM 786

Query: 1034 KKSSVVKE-----KCERIVRPQNEQ---NKQILDADGIGAPGEIIRNHDVYVNKQSPKNA 879
            KK +VVKE       + I+ P  E+   N QILD DGI APGEI+RNHDV VNK +P+N 
Sbjct: 787  KKYTVVKETYNNGTSDAIIGPNREKVGSNMQILDDDGIAAPGEIVRNHDVLVNKFTPRNT 846

Query: 878  -TAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGDKFSS 702
                 +D DY +  +KYKGPEGETTVIDRV+L SD +D+L IKFI+RHTRRPEVGDKFSS
Sbjct: 847  RDRGSRDIDYKEAPSKYKGPEGETTVIDRVILSSDTNDKLSIKFIVRHTRRPEVGDKFSS 906

Query: 701  RHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFH 522
            RHGQKGV GTIVQQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGRFH
Sbjct: 907  RHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 966

Query: 521  YGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQKLKH 342
            YGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQKLKH
Sbjct: 967  YGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQKLKH 1026

Query: 341  MVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLMLSSDP 162
            MVLDKMHARA+GPRV LTRQPTEGRSRDGGLR+GEMERDCLIAYGASM+I+ERLMLSSDP
Sbjct: 1027 MVLDKMHARAKGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMLSSDP 1086

Query: 161  YQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            YQVQVCR+CGLLGYYNHKLK AFCS CKNG+N++TM LPYACKLLFQELQSMN
Sbjct: 1087 YQVQVCRQCGLLGYYNHKLKAAFCSMCKNGDNISTMKLPYACKLLFQELQSMN 1139


>ref|XP_009385728.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Musa
            acuminata subsp. malaccensis]
          Length = 1152

 Score = 1867 bits (4837), Expect = 0.0
 Identities = 926/1137 (81%), Positives = 1020/1137 (89%), Gaps = 14/1137 (1%)
 Frame = -1

Query: 3371 VADYKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRH 3192
            VA  KSL APVK+AVDKF LLPAFL+VRGLVK+HIDSF+YFINH I KI++AN  LVCRH
Sbjct: 9    VASTKSLAAPVKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRH 68

Query: 3191 DPTLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLE 3012
            DPT YL YT I +G+PS+ +D   E LTP +CRLSDRTY API V++E+TKGNQ NK  E
Sbjct: 69   DPTFYLRYTNIEVGEPSVDVDFSIEKLTPHLCRLSDRTYAAPIKVDIEYTKGNQPNKTPE 128

Query: 3011 KREGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSK 2832
             + G++IG+MPIMLRS  C L GKDE EL+KLGECPLDPGGYF+V+G EKVILIQEQLSK
Sbjct: 129  VKRGLVIGRMPIMLRSCRCALSGKDEAELSKLGECPLDPGGYFVVKGTEKVILIQEQLSK 188

Query: 2831 NRIIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIE 2652
            NRIIIDTDSKGRVTASVTSSTHETKSKTVFFM+KDKIYLQLNQFSKPIPIM+I+KAMG+E
Sbjct: 189  NRIIIDTDSKGRVTASVTSSTHETKSKTVFFMDKDKIYLQLNQFSKPIPIMVIMKAMGME 248

Query: 2651 SDQEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGR 2472
            SDQEIVQM+GRDPRYG LLLPSIQEC+++RIYTQQQALDYLDG+VGS+ SAR G +KEG 
Sbjct: 249  SDQEIVQMVGRDPRYGGLLLPSIQECASERIYTQQQALDYLDGKVGSSNSARAGNRKEGL 308

Query: 2471 ARNIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQ 2292
            A+ I+ DVFLANVPV  GNFRP+C+YAAVMLRRM+DAILN+DT DDKDYVGNKR ELSGQ
Sbjct: 309  AKAILLDVFLANVPVFRGNFRPRCIYAAVMLRRMLDAILNTDTFDDKDYVGNKRLELSGQ 368

Query: 2291 LISLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNW 2112
            L+SLLFEDLFK+MN+  ++ VN AYE A+R++ LDFI  I++    +T GLE+A+STGNW
Sbjct: 369  LVSLLFEDLFKSMNAFALELVNRAYEHASRSSPLDFIHYIKQD--FITHGLEKAISTGNW 426

Query: 2111 DLKRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDT 1932
            DLKRF+MHRKGVSQ + RLS+IAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDT
Sbjct: 427  DLKRFKMHRKGVSQVVSRLSYIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDT 486

Query: 1931 PEGEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGL 1752
            PEGE CGLTKNLALMTHVTTDE+EGPLISLCHSLGVEDL   SGEELHA  SFLVIFNGL
Sbjct: 487  PEGEGCGLTKNLALMTHVTTDEEEGPLISLCHSLGVEDLGLQSGEELHALRSFLVIFNGL 546

Query: 1751 ILGKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGIS 1572
            ILGKHRQPQRFA+AMRKLRR GKIGEFVSIFVN++QHCVYVASDGGRVCRPLVIAD+GIS
Sbjct: 547  ILGKHRQPQRFASAMRKLRRCGKIGEFVSIFVNEKQHCVYVASDGGRVCRPLVIADKGIS 606

Query: 1571 RIKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKR 1392
            RIKEHHMKELRDGVR+FDDFLRDGL+EYLDVNEENNA+I+LYE  + D    ++++    
Sbjct: 607  RIKEHHMKELRDGVRTFDDFLRDGLVEYLDVNEENNALIALYECVN-DMDDSEDDIKKSC 665

Query: 1391 ITHIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLV 1212
            ITHIEIEP T+LG+ AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RAD+L+YLLV
Sbjct: 666  ITHIEIEPLTLLGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRADTLLYLLV 725

Query: 1211 YPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLK 1032
            YPQRPLLTTKTIEL+GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +K
Sbjct: 726  YPQRPLLTTKTIELIGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMK 785

Query: 1031 KSSVVKE-----KCERIVRPQNE---QNKQILDADGIGAPGEIIRNHDVYVNKQSPKN-- 882
            K SV+KE       +RIVRP+ +   Q  QILD DGI APGEIIRN+D+YVNK++P N  
Sbjct: 786  KYSVLKEIYGNGTSDRIVRPRKDKDNQRMQILDGDGIAAPGEIIRNNDIYVNKETPINTR 845

Query: 881  ----ATAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGD 714
                    LKD+DY  T A YKGPEGETTVIDRV+L SD +D+LCIKFIIRHTRRPEVGD
Sbjct: 846  DKTGGPMGLKDEDYKRTPAVYKGPEGETTVIDRVILCSDTNDKLCIKFIIRHTRRPEVGD 905

Query: 713  KFSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSC 534
            KFSSRHGQKGV GTIVQQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLGGKAGVSC
Sbjct: 906  KFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSC 965

Query: 533  GRFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQ 354
            GRFHYGSAFGEPSG+ADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQ
Sbjct: 966  GRFHYGSAFGEPSGNADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQ 1025

Query: 353  KLKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLML 174
            KLKHMVLDKMHARA GPRV LTRQPTEGRSRDGGLR+GEMERDCLIAYGASMLI+ERLML
Sbjct: 1026 KLKHMVLDKMHARASGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLML 1085

Query: 173  SSDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            SSDPYQVQVCRKCGLLGYYN+KLKTAFCS CKNGEN++TM LPYACKLLFQELQSMN
Sbjct: 1086 SSDPYQVQVCRKCGLLGYYNYKLKTAFCSMCKNGENISTMKLPYACKLLFQELQSMN 1142


>ref|XP_004951189.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Setaria
            italica] gi|944263470|gb|KQL27710.1| hypothetical protein
            SETIT_016141mg [Setaria italica]
          Length = 1154

 Score = 1761 bits (4562), Expect = 0.0
 Identities = 871/1137 (76%), Positives = 993/1137 (87%), Gaps = 17/1137 (1%)
 Frame = -1

Query: 3362 YKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHDPT 3183
            Y+SL APV   VDKFALLPAFLKVRGLVKEHIDSF+YFI  GI  I++AN R+  R+DP 
Sbjct: 22   YRSLAAPVANPVDKFALLPAFLKVRGLVKEHIDSFNYFITRGIRNIIQANNRIEARNDPN 81

Query: 3182 LYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEKRE 3003
            +YL YT +++G PS+ +D + E +TP  CRL+DRTY API V++E+T G Q    L+ + 
Sbjct: 82   IYLRYTNVHVGTPSVQVDYKVEEITPHFCRLTDRTYSAPIKVDIEYTVGKQHE--LQFKR 139

Query: 3002 GVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKNRI 2823
             VLIG MPIMLRS  C+L GKDE ELA+LGECPLDPGGYFIV+G EKVILIQEQLSKNRI
Sbjct: 140  NVLIGYMPIMLRSYACILHGKDEAELARLGECPLDPGGYFIVKGTEKVILIQEQLSKNRI 199

Query: 2822 IIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIESDQ 2643
            IIDTDSKGRV ASVTSSTHE KSKTV  ++K+KIYLQLNQF+KPIPI++++KAMG+ESDQ
Sbjct: 200  IIDTDSKGRVIASVTSSTHEIKSKTVITLDKEKIYLQLNQFTKPIPIIVVMKAMGMESDQ 259

Query: 2642 EIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRARN 2463
            E+VQM+GRDPRYG LL PSIQEC+++RIYTQQQAL Y+D +V   G+   G +KEGR+++
Sbjct: 260  EVVQMVGRDPRYGDLLFPSIQECASERIYTQQQALQYMDEKVTYPGA---GNQKEGRSKS 316

Query: 2462 IMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQLIS 2283
            I+RDVF+A+VPV +GNFR KC+Y  VMLRRMMDAILN++T DDKDYVGNKR ELSGQLIS
Sbjct: 317  ILRDVFIAHVPVKNGNFRQKCIYTGVMLRRMMDAILNANTFDDKDYVGNKRLELSGQLIS 376

Query: 2282 LLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWDLK 2103
            LLFEDLFKTMNS  V+ +N   +K  R++  DF   I+ +S  +T GLERA+STGNWD+K
Sbjct: 377  LLFEDLFKTMNSQAVELMNKNSDKT-RSSPSDFSQLIKHES--ITSGLERAISTGNWDIK 433

Query: 2102 RFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEG 1923
            RFRMHRKGVSQ L RLS++A+LG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEG
Sbjct: 434  RFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEG 493

Query: 1922 EACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLILG 1743
            EACGLTKNLAL+THVTTD++EGPL++LC SLGVEDL+ LSGEE+HAP SFLV+FNGLILG
Sbjct: 494  EACGLTKNLALLTHVTTDQEEGPLMNLCKSLGVEDLSLLSGEEIHAPGSFLVMFNGLILG 553

Query: 1742 KHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISRIK 1563
            KHRQPQ FANAMR LRR+GKIGEFVSIFVN++QHC+++ASDGGRVCRPL+IAD+GISR+K
Sbjct: 554  KHRQPQTFANAMRNLRRSGKIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGISRVK 613

Query: 1562 EHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKRITH 1383
            EHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNA+I+LYEH D+D      +V+   ITH
Sbjct: 614  EHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNALIALYEHVDQD------DVERSSITH 667

Query: 1382 IEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLVYPQ 1203
            IEIEP +ILG+V+GLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSL+YLLVY Q
Sbjct: 668  IEIEPLSILGVVSGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQ 727

Query: 1202 RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLKKSS 1023
            RPLLTTKTIELVGYDKLGAGQNATVAVM YSGYDIEDAIVMNKSSLDRGFGRCI +KK +
Sbjct: 728  RPLLTTKTIELVGYDKLGAGQNATVAVMGYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYT 787

Query: 1022 VVKEK-----CERIVRPQNE-------QNKQILDADGIGAPGEIIRNHDVYVNKQSPK-- 885
            V+KE       +RI +PQ +       QN + LD DGI APG+IIRNHDVYVNKQSPK  
Sbjct: 788  VIKEYYGEGVSDRIAKPQRDKDGALVKQNMRALDEDGIAAPGQIIRNHDVYVNKQSPKVI 847

Query: 884  ---NATAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGD 714
                A A L D+DY D+ A YKG +GETTV+DRVML SD +++L IK IIRHTRRPEVGD
Sbjct: 848  DRRGAGAPLMDRDYKDSPAIYKGVDGETTVVDRVMLCSDTNEKLSIKCIIRHTRRPEVGD 907

Query: 713  KFSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSC 534
            KFSSRHGQKGV GTIVQQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIEL+GGKAGVSC
Sbjct: 908  KFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELIGGKAGVSC 967

Query: 533  GRFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQ 354
            GRFHYGSAFGEPSG+ADKVEDIS TL+KHGFSY+GKDF+YSGI G+PL+AYIFMGPIYYQ
Sbjct: 968  GRFHYGSAFGEPSGNADKVEDISNTLIKHGFSYNGKDFLYSGILGHPLEAYIFMGPIYYQ 1027

Query: 353  KLKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLML 174
            KLKHMVLDKMHARA GPRV LTRQPTEGRSRDGGLR+GEMERDCLIAYGASMLI+ERL+L
Sbjct: 1028 KLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLL 1087

Query: 173  SSDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            SSDPYQVQVCRKCGLLGYYN+KLKT++CS CKNGEN+A M LPYACKLLFQELQSMN
Sbjct: 1088 SSDPYQVQVCRKCGLLGYYNYKLKTSYCSMCKNGENMAKMRLPYACKLLFQELQSMN 1144


>ref|NP_001050323.1| Os03g0403100 [Oryza sativa Japonica Group]
            gi|108708688|gb|ABF96483.1| DNA-directed RNA polymerase
            III 130 kDa polypeptide, putative, expressed [Oryza
            sativa Japonica Group] gi|113548794|dbj|BAF12237.1|
            Os03g0403100 [Oryza sativa Japonica Group]
            gi|937909698|dbj|BAS84618.1| Os03g0403100 [Oryza sativa
            Japonica Group]
          Length = 1155

 Score = 1748 bits (4526), Expect = 0.0
 Identities = 861/1136 (75%), Positives = 984/1136 (86%), Gaps = 16/1136 (1%)
 Frame = -1

Query: 3362 YKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHDPT 3183
            Y+SL APV   VDKFALLPAFLKVRGLVKEHIDSF+YFI  GI  I++AN R+  R++P+
Sbjct: 24   YRSLAAPVTKPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIRNIVKANNRIEARNNPS 83

Query: 3182 LYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEKRE 3003
            ++L Y  + +G PS+ +    E +TP  CRL+DRTY AP+  ++E+T G Q    L+++ 
Sbjct: 84   IFLRYNSVRVGVPSVQVQYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYE--LKRKP 141

Query: 3002 GVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKNRI 2823
              +IG +PIMLRS  CVL GKDE ELA+ GECPLDPGGYFIV+G EKVILIQEQLSKNRI
Sbjct: 142  NFIIGYLPIMLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRI 201

Query: 2822 IIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIESDQ 2643
            IIDTDSKGRV ASVTSSTHE KSKTV FMEK+KIYLQLNQF+KPIPI++++KAMG+ESDQ
Sbjct: 202  IIDTDSKGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQ 261

Query: 2642 EIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRARN 2463
            E+ QM+GRDPRYG LL PSIQEC+ +RIYTQ+QAL Y+D +V   G+   G +KEGR+++
Sbjct: 262  EVAQMVGRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPGA---GNQKEGRSKS 318

Query: 2462 IMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQLIS 2283
            I+RDVF+A+VPV  GNFRPKC+Y AVMLRRMMDAILN+DT DDKDYVGNKR ELSGQLIS
Sbjct: 319  ILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLIS 378

Query: 2282 LLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWDLK 2103
            LLFEDLFKTMNS  V+ +N   EK + ++ LD    +  +  I+T GLERA+STGNWD+K
Sbjct: 379  LLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDL--SLHIKENIITHGLERAISTGNWDIK 435

Query: 2102 RFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEG 1923
            RFRMHRKGVSQ L RLS++A+LG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEG
Sbjct: 436  RFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEG 495

Query: 1922 EACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLILG 1743
            EACGLTKNLAL+THVTTD++EGPL++LC+SLGVEDL+ LSGEE+HA  SFLV+FNGLILG
Sbjct: 496  EACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLILG 555

Query: 1742 KHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISRIK 1563
            KHRQPQRFANAMRKLRR+G IGEFVSIFVN++QHC+++ASDGGRVCRPL+IAD+GI R+K
Sbjct: 556  KHRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRVK 615

Query: 1562 EHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKRITH 1383
            EHHMK+LRDG+RSFDDFLRDGLIEYLDVNEENNA+I+LYEH+D+D      +V    ITH
Sbjct: 616  EHHMKQLRDGIRSFDDFLRDGLIEYLDVNEENNALIALYEHEDQD------DVQRSSITH 669

Query: 1382 IEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLVYPQ 1203
            IEIEP TILG+VAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSL+YLLVY Q
Sbjct: 670  IEIEPLTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQ 729

Query: 1202 RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLKKSS 1023
            RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +KK +
Sbjct: 730  RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYT 789

Query: 1022 VVKEKCE-----RIVRPQNE-------QNKQILDADGIGAPGEIIRNHDVYVNKQSPKNA 879
            V KEK E     RIV+PQ +       QN + LD DG  APG IIRNHD+YVNKQ+P+N 
Sbjct: 790  VTKEKYEGGYSDRIVKPQRDKDGALLKQNMRALDEDGFAAPGLIIRNHDIYVNKQTPRNT 849

Query: 878  T----AALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGDK 711
                 A L D+DY D+ A YKG +GETTV+DRVML SD D++L IK IIRHTRRPEVGDK
Sbjct: 850  KRDSGAHLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGDK 909

Query: 710  FSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCG 531
            FSSRHGQKGV GTIVQQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLGGKAGVSCG
Sbjct: 910  FSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCG 969

Query: 530  RFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQK 351
            +FHYGSAFGEPSG+ADKVEDIS TLVKHGFSY+GKD +YSGI G+P QAY+FMGPIYYQK
Sbjct: 970  QFHYGSAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQK 1029

Query: 350  LKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLMLS 171
            LKHMVLDKMHARA GPRV LTRQPTEGRSRDGGLR+GEMERDCLIAYGASMLI+ERL++S
Sbjct: 1030 LKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLIS 1089

Query: 170  SDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            SDPYQVQVCRKCGLLGYYNHKLK ++CS CKNGEN+A M +PYACKLLFQELQ+MN
Sbjct: 1090 SDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMN 1145


>gb|AAP03366.1| putative RNA polymerase III [Oryza sativa Japonica Group]
          Length = 1174

 Score = 1748 bits (4526), Expect = 0.0
 Identities = 861/1136 (75%), Positives = 984/1136 (86%), Gaps = 16/1136 (1%)
 Frame = -1

Query: 3362 YKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHDPT 3183
            Y+SL APV   VDKFALLPAFLKVRGLVKEHIDSF+YFI  GI  I++AN R+  R++P+
Sbjct: 43   YRSLAAPVTKPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIRNIVKANNRIEARNNPS 102

Query: 3182 LYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEKRE 3003
            ++L Y  + +G PS+ +    E +TP  CRL+DRTY AP+  ++E+T G Q    L+++ 
Sbjct: 103  IFLRYNSVRVGVPSVQVQYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYE--LKRKP 160

Query: 3002 GVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKNRI 2823
              +IG +PIMLRS  CVL GKDE ELA+ GECPLDPGGYFIV+G EKVILIQEQLSKNRI
Sbjct: 161  NFIIGYLPIMLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRI 220

Query: 2822 IIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIESDQ 2643
            IIDTDSKGRV ASVTSSTHE KSKTV FMEK+KIYLQLNQF+KPIPI++++KAMG+ESDQ
Sbjct: 221  IIDTDSKGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQ 280

Query: 2642 EIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRARN 2463
            E+ QM+GRDPRYG LL PSIQEC+ +RIYTQ+QAL Y+D +V   G+   G +KEGR+++
Sbjct: 281  EVAQMVGRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPGA---GNQKEGRSKS 337

Query: 2462 IMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQLIS 2283
            I+RDVF+A+VPV  GNFRPKC+Y AVMLRRMMDAILN+DT DDKDYVGNKR ELSGQLIS
Sbjct: 338  ILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLIS 397

Query: 2282 LLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWDLK 2103
            LLFEDLFKTMNS  V+ +N   EK + ++ LD    +  +  I+T GLERA+STGNWD+K
Sbjct: 398  LLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDL--SLHIKENIITHGLERAISTGNWDIK 454

Query: 2102 RFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEG 1923
            RFRMHRKGVSQ L RLS++A+LG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEG
Sbjct: 455  RFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEG 514

Query: 1922 EACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLILG 1743
            EACGLTKNLAL+THVTTD++EGPL++LC+SLGVEDL+ LSGEE+HA  SFLV+FNGLILG
Sbjct: 515  EACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLILG 574

Query: 1742 KHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISRIK 1563
            KHRQPQRFANAMRKLRR+G IGEFVSIFVN++QHC+++ASDGGRVCRPL+IAD+GI R+K
Sbjct: 575  KHRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRVK 634

Query: 1562 EHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKRITH 1383
            EHHMK+LRDG+RSFDDFLRDGLIEYLDVNEENNA+I+LYEH+D+D      +V    ITH
Sbjct: 635  EHHMKQLRDGIRSFDDFLRDGLIEYLDVNEENNALIALYEHEDQD------DVQRSSITH 688

Query: 1382 IEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLVYPQ 1203
            IEIEP TILG+VAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSL+YLLVY Q
Sbjct: 689  IEIEPLTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQ 748

Query: 1202 RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLKKSS 1023
            RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +KK +
Sbjct: 749  RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYT 808

Query: 1022 VVKEKCE-----RIVRPQNE-------QNKQILDADGIGAPGEIIRNHDVYVNKQSPKNA 879
            V KEK E     RIV+PQ +       QN + LD DG  APG IIRNHD+YVNKQ+P+N 
Sbjct: 809  VTKEKYEGGYSDRIVKPQRDKDGALLKQNMRALDEDGFAAPGLIIRNHDIYVNKQTPRNT 868

Query: 878  T----AALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGDK 711
                 A L D+DY D+ A YKG +GETTV+DRVML SD D++L IK IIRHTRRPEVGDK
Sbjct: 869  KRDSGAHLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGDK 928

Query: 710  FSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCG 531
            FSSRHGQKGV GTIVQQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLGGKAGVSCG
Sbjct: 929  FSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCG 988

Query: 530  RFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQK 351
            +FHYGSAFGEPSG+ADKVEDIS TLVKHGFSY+GKD +YSGI G+P QAY+FMGPIYYQK
Sbjct: 989  QFHYGSAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQK 1048

Query: 350  LKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLMLS 171
            LKHMVLDKMHARA GPRV LTRQPTEGRSRDGGLR+GEMERDCLIAYGASMLI+ERL++S
Sbjct: 1049 LKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLIS 1108

Query: 170  SDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            SDPYQVQVCRKCGLLGYYNHKLK ++CS CKNGEN+A M +PYACKLLFQELQ+MN
Sbjct: 1109 SDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMN 1164


>ref|XP_006656544.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Oryza
            brachyantha]
          Length = 1164

 Score = 1741 bits (4510), Expect = 0.0
 Identities = 856/1137 (75%), Positives = 986/1137 (86%), Gaps = 17/1137 (1%)
 Frame = -1

Query: 3362 YKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHDPT 3183
            Y+SL APV   VDKFALLPAFLKVRGLVKEHIDSF+YFI  GI  I++AN R+  R++P+
Sbjct: 32   YRSLAAPVSNPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIKNIVKANNRIEARNNPS 91

Query: 3182 LYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEKRE 3003
            ++L Y  + +G PS+ ++   E +TP  CRL+DRTY AP+  ++E+T G Q    L+++ 
Sbjct: 92   IFLRYVNVRVGVPSVQVEYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYE--LKRKP 149

Query: 3002 GVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKNRI 2823
              +IG +PIMLRS  CVL G+DE ELA+ GECPLDPGGYFIV+G EKVILIQEQLSKNRI
Sbjct: 150  QFIIGYLPIMLRSYACVLNGRDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRI 209

Query: 2822 IIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIESDQ 2643
            IIDTDSK RV ASVTSSTHE KSKTV FMEK+KIYLQLNQF+KPIPI++++KAMG+ESDQ
Sbjct: 210  IIDTDSKRRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQ 269

Query: 2642 EIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRARN 2463
            E+VQM+GRDPRYG LL PSIQEC+ +RIYTQ+QAL Y+D +V   G   TG +KEGR+++
Sbjct: 270  EVVQMVGRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPG---TGNQKEGRSKS 326

Query: 2462 IMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQLIS 2283
            I+RDVF+A+VPV+ GNFRPKC+Y AVMLRRMMDAILN+DT DDKDYVGNKR ELSGQLIS
Sbjct: 327  ILRDVFVAHVPVNSGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLIS 386

Query: 2282 LLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWDLK 2103
            LLFEDLFKTMNS  V+ +N   E+ + ++ LD    +  +  I+T GLERA+STGNWD+K
Sbjct: 387  LLFEDLFKTMNSNAVELMNRTSERIH-SSPLDL--SLHIKENIITHGLERAISTGNWDIK 443

Query: 2102 RFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEG 1923
            RFRMHRKGVSQ L RLS++A+LG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEG
Sbjct: 444  RFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEG 503

Query: 1922 EACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLILG 1743
            EACGLTKNLAL+THVTTD++EGPL++LC+SLGVEDL+ LSGEE+HAP S+LV+FNGLILG
Sbjct: 504  EACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHAPGSYLVMFNGLILG 563

Query: 1742 KHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISRIK 1563
            KHRQPQRFANAMRKLRR+G IGEFVSIFVN++QHC+++ASDGGRVCRPL+IAD+GISR+K
Sbjct: 564  KHRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGISRVK 623

Query: 1562 EHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKRITH 1383
            EHHMKELRDG+RSFDDFLRDGLIEYLDVNEENNA+I+LYEH+D+D++   +      ITH
Sbjct: 624  EHHMKELRDGIRSFDDFLRDGLIEYLDVNEENNALIALYEHEDQDNVQRSS------ITH 677

Query: 1382 IEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLVYPQ 1203
            IEIEP TILG+VAGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQLFRADSL+YLLVY Q
Sbjct: 678  IEIEPLTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLFRADSLLYLLVYAQ 737

Query: 1202 RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLKKSS 1023
            RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +KK +
Sbjct: 738  RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYT 797

Query: 1022 VVKEKCE-----RIVRPQNE-------QNKQILDADGIGAPGEIIRNHDVYVNKQSPKNA 879
            V KEK E     RIV+PQ +       QN + LD DG  APG IIRNHD+YVNKQ+PK+ 
Sbjct: 798  VTKEKYEGGYSDRIVKPQRDKDGSLLKQNMRALDEDGFAAPGLIIRNHDIYVNKQTPKST 857

Query: 878  T-----AALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGD 714
                  A L D+DY D+ A YKG +GETTV+DRVML SD D++L IK IIRHTRRPEVGD
Sbjct: 858  KRDSGGAQLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGD 917

Query: 713  KFSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSC 534
            KFSSRHGQKGV GTIVQQEDFPFSERG+CPDLIMNPHG+PSRMTIGKMIELLGGKAG+SC
Sbjct: 918  KFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTIGKMIELLGGKAGLSC 977

Query: 533  GRFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQ 354
            G+FHYGSAFGE SG ADKVEDIS TL+KHGFSY+GKD +YSGI G P Q+YIFMGPIYYQ
Sbjct: 978  GQFHYGSAFGESSGTADKVEDISLTLIKHGFSYNGKDLLYSGILGNPCQSYIFMGPIYYQ 1037

Query: 353  KLKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLML 174
            KLKHMVLDKMHARA GPRV LTRQPTEGRSRDGGLR+GEMERDCLIAYGASMLI+ERL++
Sbjct: 1038 KLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLI 1097

Query: 173  SSDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            SSDPYQVQVCRKCGLLGYYNHKLK ++CS CKNGEN+A M +PYACKLLFQELQ+MN
Sbjct: 1098 SSDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMN 1154


>ref|XP_003570586.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Brachypodium
            distachyon] gi|944058040|gb|KQJ93630.1| hypothetical
            protein BRADI_3g05847 [Brachypodium distachyon]
          Length = 1158

 Score = 1735 bits (4494), Expect = 0.0
 Identities = 859/1140 (75%), Positives = 982/1140 (86%), Gaps = 17/1140 (1%)
 Frame = -1

Query: 3371 VADYKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRH 3192
            V  Y+SL APV+  VDKF LLPAFLKVRGLVKEHIDSF+YFI  GI  I++AN R+  R 
Sbjct: 22   VPTYRSLAAPVRRPVDKFELLPAFLKVRGLVKEHIDSFNYFITKGIKNIVQANNRIEARS 81

Query: 3191 DPTLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLE 3012
            DP++YL Y  I +G+PS+ +D + E +TP  CRL+DRTY AP+ V++E+T G     ++ 
Sbjct: 82   DPSIYLRYKDIRVGEPSVQVDFRVETITPHFCRLTDRTYSAPVIVDIEYTVGK--THVVH 139

Query: 3011 KREGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSK 2832
            ++   +IG MPIMLRS  CVL GKDE ELA+ GECPLDPGGYF+V+GNEKVILIQEQLSK
Sbjct: 140  RKPNFIIGYMPIMLRSYACVLNGKDEAELARYGECPLDPGGYFVVKGNEKVILIQEQLSK 199

Query: 2831 NRIIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIE 2652
            NRIIIDTD+K RV ASVTSSTHE KSKTV  M+K+KIYLQLNQF+KPIPI++++KAMGI+
Sbjct: 200  NRIIIDTDNKKRVIASVTSSTHEVKSKTVIVMDKEKIYLQLNQFTKPIPIIVVMKAMGIQ 259

Query: 2651 SDQEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGR 2472
            SDQEIVQM+GRDPRYG LL  SIQEC+++RIYTQQQAL Y+D +V   G    G  KEGR
Sbjct: 260  SDQEIVQMVGRDPRYGDLLYLSIQECASERIYTQQQALQYMDDKVMFPGP---GNVKEGR 316

Query: 2471 ARNIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQ 2292
            ++ ++RDVF+A+VPV +GNFR KC+Y AVMLRRM+DAILNSDT DDKDYVGNKR ELSGQ
Sbjct: 317  SKTLLRDVFVAHVPVENGNFREKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRLELSGQ 376

Query: 2291 LISLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNW 2112
            L+SLLFEDLFKTMNS  VD +N   + A R++ LDF   I +Q  ++T GLERA+STGNW
Sbjct: 377  LVSLLFEDLFKTMNSFAVDRMNKNSDMA-RSSPLDFSQLIMQQD-LITTGLERAISTGNW 434

Query: 2111 DLKRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDT 1932
            D+KRF+MHRKGVSQ L RLS++A+LG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDT
Sbjct: 435  DIKRFKMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDT 494

Query: 1931 PEGEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGL 1752
            PEGEACGLTKNLAL+THVTTD++EGPL++LC+SLGVE L+ LSGEE+HAP SFLV+FNGL
Sbjct: 495  PEGEACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEKLSLLSGEEIHAPGSFLVMFNGL 554

Query: 1751 ILGKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGIS 1572
            ILGKHRQPQRFA +MR  R++GKIGEFVSIFVN++QHC+++ASDGGRVCRPL+IAD+G S
Sbjct: 555  ILGKHRQPQRFAKSMRTFRQSGKIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGRS 614

Query: 1571 RIKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKR 1392
            R+KEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNA+I+LYEH D+D      +V    
Sbjct: 615  RVKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNALIALYEHLDQD------DVQRSS 668

Query: 1391 ITHIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLV 1212
            ITHIEIEP TILG+VAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSL+YLLV
Sbjct: 669  ITHIEIEPMTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLV 728

Query: 1211 YPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLK 1032
            Y QRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +K
Sbjct: 729  YAQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMK 788

Query: 1031 KSSVVKEK------CERIVRPQNE-------QNKQILDADGIGAPGEIIRNHDVYVNKQS 891
            K +V  EK       +RI +PQ +       QN + LD DG  APG+IIRNHD+YVNKQ+
Sbjct: 789  KYTVTTEKYANGTISDRIAKPQRDKDGALIKQNMRALDEDGFVAPGQIIRNHDIYVNKQT 848

Query: 890  PK----NATAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPE 723
            PK         L D+DY D+ A YKG +GETTV+DRVML SD +D+L IK IIRHTRRPE
Sbjct: 849  PKAIPKTPGTTLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTNDKLTIKCIIRHTRRPE 908

Query: 722  VGDKFSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAG 543
            VGDKFSSRHGQKGV GTIVQQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLGGKAG
Sbjct: 909  VGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAG 968

Query: 542  VSCGRFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPI 363
            VSCGRFHYGSAFGE SG+AD V+DIS+TLVKHGFSY+GKDF+YSGI G+PL+AYIFMGPI
Sbjct: 969  VSCGRFHYGSAFGESSGNADHVDDISHTLVKHGFSYNGKDFLYSGILGHPLEAYIFMGPI 1028

Query: 362  YYQKLKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYER 183
            YYQKLKHMVLDKMHARA GPRV LTRQPTEGRSRDGGLR+GEMERDCLIAYGASMLI+ER
Sbjct: 1029 YYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFER 1088

Query: 182  LMLSSDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            L+LSSDPYQVQVCRKCGLLGYYN+KLKT+FCS CKNGEN+A M +PYACKLLFQELQSMN
Sbjct: 1089 LLLSSDPYQVQVCRKCGLLGYYNYKLKTSFCSMCKNGENMAKMRMPYACKLLFQELQSMN 1148


>ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
            [Nelumbo nucifera]
          Length = 1140

 Score = 1713 bits (4437), Expect = 0.0
 Identities = 843/1142 (73%), Positives = 965/1142 (84%), Gaps = 13/1142 (1%)
 Frame = -1

Query: 3389 MVAQRHVADYKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANR 3210
            +V +    D + + +PVK+AVDKF LLP FLKVRGLVK+H+DSF+YF+N GI KI+EAN 
Sbjct: 2    VVREDFPVDKQFIASPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVEANN 61

Query: 3209 RLVCRHDPTLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQ 3030
            R+    DP  YL+YT + +G PSI  D   + LTP +CRLSD TY API VN+E+ K   
Sbjct: 62   RITASSDPNFYLKYTDVKIGTPSITADNVTDTLTPHICRLSDMTYAAPIMVNIEYVKKFC 121

Query: 3029 ANKLLEKREGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILI 2850
                +EK+E V+IG+MPIMLRS  CVL GKDE ELA+LGECPLDPGGYF+V+G EKVILI
Sbjct: 122  DQITIEKKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVVKGTEKVILI 181

Query: 2849 QEQLSKNRIIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIIL 2670
            QEQLSKNRIIIDTD KG + ASVTSST  TKSKT+  M+K KIYL+LN F K IPIM+++
Sbjct: 182  QEQLSKNRIIIDTDKKGCLNASVTSSTEATKSKTIILMDKGKIYLRLNAFVKDIPIMVVM 241

Query: 2669 KAMGIESDQEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTG 2490
            KAMG+ESDQE+VQM+GRDP+YGALLLPSIQEC+   IYTQQQAL++L+ +V     +   
Sbjct: 242  KAMGMESDQEVVQMVGRDPKYGALLLPSIQECAGHGIYTQQQALEFLEKKVKKFSFSNPA 301

Query: 2489 VKKEGRARNIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKR 2310
            ++KEGRA + +R+VF+ANVPV   NFRPKC+Y AVM+RRMM+A LN D MDDKDYVGNKR
Sbjct: 302  LEKEGRAMDTLRNVFIANVPVRQNNFRPKCIYVAVMMRRMMEAFLNKDAMDDKDYVGNKR 361

Query: 2309 FELSGQLISLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERA 2130
             ELSGQLISLLFEDLFKTMNS    SV++   K NR+  +D    I + S  +T GLERA
Sbjct: 362  LELSGQLISLLFEDLFKTMNSEARKSVDLQLAKVNRSVPVDIARYIVKDS--ITYGLERA 419

Query: 2129 LSTGNWDLKRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGM 1950
            +STGNWDLKRFRMHRKG++Q L RLSFIA LGHMT+ISPQFEK+RKVSGPRALQPSQWGM
Sbjct: 420  ISTGNWDLKRFRMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGM 479

Query: 1949 LCPCDTPEGEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFL 1770
            LCPCDTPEGEACGL KNLALMTHVTTD++EGPLISLCHSLGVEDL  LS EE+H P S+L
Sbjct: 480  LCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCHSLGVEDLELLSAEEIHTPNSYL 539

Query: 1769 VIFNGLILGKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVI 1590
            VIFNGLILGKHRQP++FANA+RKLRR+GKIGEFVS++VN++Q CVY+ASDGGRVCRPLVI
Sbjct: 540  VIFNGLILGKHRQPKQFANALRKLRRSGKIGEFVSVYVNERQRCVYIASDGGRVCRPLVI 599

Query: 1589 ADEGISRIKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKN 1410
            AD+G+SRIKEHHMKEL DGVRSF+DFLR+GLIEYLDVNEENNA+I+LYE + +       
Sbjct: 600  ADKGVSRIKEHHMKELMDGVRSFNDFLREGLIEYLDVNEENNALIALYEGEAEPET---- 655

Query: 1409 EVDGKRITHIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADS 1230
                   THIEIEPFTILG+ AGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R D+
Sbjct: 656  -------THIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLCRMDT 708

Query: 1229 LIYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1050
            L+YLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 709  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 768

Query: 1049 RCITLKKSSVVKEK-----CERIVRPQNEQN--KQILDADGIGAPGEIIRNHDVYVNKQS 891
            RCI +KK S + ++      +RI+RPQ  ++  ++ILDADGI APGEIIR HD+Y+NK++
Sbjct: 769  RCIVMKKLSAINQRYPNDTSDRIIRPQKVRSNAEKILDADGIAAPGEIIRPHDIYINKET 828

Query: 890  PKN------ATAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRR 729
            P N      +   L D  Y  T   YKGP+GET V+DRV L SD D+ LCIKF+IRHTRR
Sbjct: 829  PVNTRDKFTSPTGLPDSAYKSTRQTYKGPQGETAVVDRVALCSDKDNNLCIKFLIRHTRR 888

Query: 728  PEVGDKFSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGK 549
            PEVGDKFSSRHGQKGV GTI+QQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLGGK
Sbjct: 889  PEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGK 948

Query: 548  AGVSCGRFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMG 369
            AGVSCGRFHYGSAFGEPSGHADKVE IS TLV+HGFSY+GKDFIYSGITG PLQAYIFMG
Sbjct: 949  AGVSCGRFHYGSAFGEPSGHADKVEAISETLVRHGFSYNGKDFIYSGITGCPLQAYIFMG 1008

Query: 368  PIYYQKLKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIY 189
            PIYYQKLKHMVLDKMHARARGPRV LTRQPTEGRSRDGGLR+GEMERDCLIAYGASMLI+
Sbjct: 1009 PIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIF 1068

Query: 188  ERLMLSSDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQS 9
            ERLMLSSDP++VQVCR CGLLGYYNHKLKT  CS+CK+G++++ M LPYACKLLFQELQS
Sbjct: 1069 ERLMLSSDPFEVQVCRVCGLLGYYNHKLKTGICSTCKSGDHISKMKLPYACKLLFQELQS 1128

Query: 8    MN 3
            MN
Sbjct: 1129 MN 1130


>ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
            [Nelumbo nucifera]
          Length = 1142

 Score = 1708 bits (4424), Expect = 0.0
 Identities = 843/1144 (73%), Positives = 965/1144 (84%), Gaps = 15/1144 (1%)
 Frame = -1

Query: 3389 MVAQRHVADYKSLTAPVKTAVDKFALLPAFLK--VRGLVKEHIDSFDYFINHGIHKILEA 3216
            +V +    D + + +PVK+AVDKF LLP FLK  VRGLVK+H+DSF+YF+N GI KI+EA
Sbjct: 2    VVREDFPVDKQFIASPVKSAVDKFQLLPEFLKLQVRGLVKQHLDSFNYFVNIGIKKIVEA 61

Query: 3215 NRRLVCRHDPTLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKG 3036
            N R+    DP  YL+YT + +G PSI  D   + LTP +CRLSD TY API VN+E+ K 
Sbjct: 62   NNRITASSDPNFYLKYTDVKIGTPSITADNVTDTLTPHICRLSDMTYAAPIMVNIEYVKK 121

Query: 3035 NQANKLLEKREGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVI 2856
                  +EK+E V+IG+MPIMLRS  CVL GKDE ELA+LGECPLDPGGYF+V+G EKVI
Sbjct: 122  FCDQITIEKKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVVKGTEKVI 181

Query: 2855 LIQEQLSKNRIIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMI 2676
            LIQEQLSKNRIIIDTD KG + ASVTSST  TKSKT+  M+K KIYL+LN F K IPIM+
Sbjct: 182  LIQEQLSKNRIIIDTDKKGCLNASVTSSTEATKSKTIILMDKGKIYLRLNAFVKDIPIMV 241

Query: 2675 ILKAMGIESDQEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSAR 2496
            ++KAMG+ESDQE+VQM+GRDP+YGALLLPSIQEC+   IYTQQQAL++L+ +V     + 
Sbjct: 242  VMKAMGMESDQEVVQMVGRDPKYGALLLPSIQECAGHGIYTQQQALEFLEKKVKKFSFSN 301

Query: 2495 TGVKKEGRARNIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGN 2316
              ++KEGRA + +R+VF+ANVPV   NFRPKC+Y AVM+RRMM+A LN D MDDKDYVGN
Sbjct: 302  PALEKEGRAMDTLRNVFIANVPVRQNNFRPKCIYVAVMMRRMMEAFLNKDAMDDKDYVGN 361

Query: 2315 KRFELSGQLISLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLE 2136
            KR ELSGQLISLLFEDLFKTMNS    SV++   K NR+  +D    I + S  +T GLE
Sbjct: 362  KRLELSGQLISLLFEDLFKTMNSEARKSVDLQLAKVNRSVPVDIARYIVKDS--ITYGLE 419

Query: 2135 RALSTGNWDLKRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQW 1956
            RA+STGNWDLKRFRMHRKG++Q L RLSFIA LGHMT+ISPQFEK+RKVSGPRALQPSQW
Sbjct: 420  RAISTGNWDLKRFRMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQW 479

Query: 1955 GMLCPCDTPEGEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTS 1776
            GMLCPCDTPEGEACGL KNLALMTHVTTD++EGPLISLCHSLGVEDL  LS EE+H P S
Sbjct: 480  GMLCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCHSLGVEDLELLSAEEIHTPNS 539

Query: 1775 FLVIFNGLILGKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPL 1596
            +LVIFNGLILGKHRQP++FANA+RKLRR+GKIGEFVS++VN++Q CVY+ASDGGRVCRPL
Sbjct: 540  YLVIFNGLILGKHRQPKQFANALRKLRRSGKIGEFVSVYVNERQRCVYIASDGGRVCRPL 599

Query: 1595 VIADEGISRIKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGE 1416
            VIAD+G+SRIKEHHMKEL DGVRSF+DFLR+GLIEYLDVNEENNA+I+LYE + +     
Sbjct: 600  VIADKGVSRIKEHHMKELMDGVRSFNDFLREGLIEYLDVNEENNALIALYEGEAEPET-- 657

Query: 1415 KNEVDGKRITHIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRA 1236
                     THIEIEPFTILG+ AGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R 
Sbjct: 658  ---------THIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLCRM 708

Query: 1235 DSLIYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRG 1056
            D+L+YLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRG
Sbjct: 709  DTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRG 768

Query: 1055 FGRCITLKKSSVVKEK-----CERIVRPQNEQN--KQILDADGIGAPGEIIRNHDVYVNK 897
            FGRCI +KK S + ++      +RI+RPQ  ++  ++ILDADGI APGEIIR HD+Y+NK
Sbjct: 769  FGRCIVMKKLSAINQRYPNDTSDRIIRPQKVRSNAEKILDADGIAAPGEIIRPHDIYINK 828

Query: 896  QSPKN------ATAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHT 735
            ++P N      +   L D  Y  T   YKGP+GET V+DRV L SD D+ LCIKF+IRHT
Sbjct: 829  ETPVNTRDKFTSPTGLPDSAYKSTRQTYKGPQGETAVVDRVALCSDKDNNLCIKFLIRHT 888

Query: 734  RRPEVGDKFSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLG 555
            RRPEVGDKFSSRHGQKGV GTI+QQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLG
Sbjct: 889  RRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLG 948

Query: 554  GKAGVSCGRFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIF 375
            GKAGVSCGRFHYGSAFGEPSGHADKVE IS TLV+HGFSY+GKDFIYSGITG PLQAYIF
Sbjct: 949  GKAGVSCGRFHYGSAFGEPSGHADKVEAISETLVRHGFSYNGKDFIYSGITGCPLQAYIF 1008

Query: 374  MGPIYYQKLKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASML 195
            MGPIYYQKLKHMVLDKMHARARGPRV LTRQPTEGRSRDGGLR+GEMERDCLIAYGASML
Sbjct: 1009 MGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASML 1068

Query: 194  IYERLMLSSDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQEL 15
            I+ERLMLSSDP++VQVCR CGLLGYYNHKLKT  CS+CK+G++++ M LPYACKLLFQEL
Sbjct: 1069 IFERLMLSSDPFEVQVCRVCGLLGYYNHKLKTGICSTCKSGDHISKMKLPYACKLLFQEL 1128

Query: 14   QSMN 3
            QSMN
Sbjct: 1129 QSMN 1132


>ref|XP_008648749.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Zea mays]
          Length = 1153

 Score = 1704 bits (4412), Expect = 0.0
 Identities = 842/1135 (74%), Positives = 970/1135 (85%), Gaps = 15/1135 (1%)
 Frame = -1

Query: 3362 YKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHDPT 3183
            Y+SL APV+  VDKFALLPAFLKVRGLVKEHIDSF+YF+N GI KI+EAN R+  R+DP+
Sbjct: 23   YRSLAAPVRKPVDKFALLPAFLKVRGLVKEHIDSFNYFVNKGIKKIVEANNRIEARNDPS 82

Query: 3182 LYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEKRE 3003
            +YL Y  +++G PS+ ++   E +TP  CRL+DRTY API V++E+T G Q    + ++ 
Sbjct: 83   IYLRYLGVHVGMPSVHVEYNIENITPHFCRLTDRTYSAPIKVHIEYTVGKQHE--VRRKN 140

Query: 3002 GVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKNRI 2823
              +IG MPIMLRS  C+L  KDE ELAK GECPLDPGGYF+V+G EKVILIQEQL+KNRI
Sbjct: 141  NFIIGYMPIMLRSHACILYEKDEAELAKYGECPLDPGGYFVVKGTEKVILIQEQLAKNRI 200

Query: 2822 IIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIESDQ 2643
            I+DTDSKGRV ASVTSSTH  KSKTV FM+K KIYLQLNQF+KPIPI++++KAMG+ESDQ
Sbjct: 201  IVDTDSKGRVIASVTSSTHAIKSKTVIFMDKGKIYLQLNQFNKPIPIIVVMKAMGMESDQ 260

Query: 2642 EIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRARN 2463
            E VQM+GRDPRYG LL PSIQEC+++RIYT+Q+AL Y+D +V   G+     +KEGR+ +
Sbjct: 261  ETVQMVGRDPRYGDLLFPSIQECASERIYTRQRALQYMDEKVTYPGATN---QKEGRSYS 317

Query: 2462 IMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQLIS 2283
            I+RDVF+A+VPV +GN RPKC+Y A+MLRRMMDAI+NSDT DDKDYVGNKRFELSGQLIS
Sbjct: 318  ILRDVFIAHVPVKNGNLRPKCIYTALMLRRMMDAIVNSDTFDDKDYVGNKRFELSGQLIS 377

Query: 2282 LLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWDLK 2103
            LLFEDLFKTMNS  V+ +N   +K + ++ LDF   I + S  +T GLERA+STGNWD+K
Sbjct: 378  LLFEDLFKTMNSQAVERMNKNSDKTH-SSPLDFSQLIMQDS--ITFGLERAISTGNWDIK 434

Query: 2102 RFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEG 1923
            RFRMHRKGVSQ L RLS++A+LG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEG
Sbjct: 435  RFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEG 494

Query: 1922 EACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLILG 1743
            EACGLTKNLAL++HVTTD++EGPLI LC+SLGVEDL  LS EE+H P SFLV+FNGLILG
Sbjct: 495  EACGLTKNLALLSHVTTDQEEGPLIYLCYSLGVEDLLSLSSEEIHTPGSFLVMFNGLILG 554

Query: 1742 KHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISRIK 1563
            KH+ PQR    +R LRR+  IGEFVSIF+N++QHCV++ASDGGRVCRPL+IAD GISRI 
Sbjct: 555  KHKDPQRLVIDLRNLRRSNVIGEFVSIFINEKQHCVHIASDGGRVCRPLIIADMGISRID 614

Query: 1562 EHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKRITH 1383
            E HM++LR G   FDDFLRDGLIEYLDVNEENNA+I+LYEH D+D      +V+   ITH
Sbjct: 615  ETHMEKLRHGTCGFDDFLRDGLIEYLDVNEENNALIALYEHMDQD------DVERSSITH 668

Query: 1382 IEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLVYPQ 1203
            IEIEP +ILG+V+GLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSL+YLLVY Q
Sbjct: 669  IEIEPLSILGVVSGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQ 728

Query: 1202 RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLKKSS 1023
            RPLLTTKTIELVGYDKLGAGQNATVAVM YSGYDIEDAIVMNKSSLDRGFGRCI LKK +
Sbjct: 729  RPLLTTKTIELVGYDKLGAGQNATVAVMGYSGYDIEDAIVMNKSSLDRGFGRCIALKKYT 788

Query: 1022 VVKEK-----CERIVRPQNE------QNKQILDADGIGAPGEIIRNHDVYVNKQSPKNAT 876
            V+K+       + IV PQ +      QN + LD DGI  PG+IIRNHD+YVNK++PKN +
Sbjct: 789  VLKDNYGDGVSDMIVEPQRDNGVLIKQNMRALDEDGIAGPGQIIRNHDIYVNKRTPKNTS 848

Query: 875  A----ALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGDKF 708
                 AL++ DY D+ A YKG +GETTV+DRVML SD +D+L IK IIRHTRRPEVGDKF
Sbjct: 849  KGIGRALRESDYKDSPALYKGVDGETTVVDRVMLCSDTNDKLSIKCIIRHTRRPEVGDKF 908

Query: 707  SSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGR 528
            SSRHGQKGV GTIVQQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLGGKAGVSCGR
Sbjct: 909  SSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGR 968

Query: 527  FHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQKL 348
            FHYGSAFGEPSG+ADKV DIS TL+KHGFSY+GKDF+YSGI G PL+AYIFMGPIYYQKL
Sbjct: 969  FHYGSAFGEPSGNADKVADISSTLIKHGFSYNGKDFLYSGILGQPLEAYIFMGPIYYQKL 1028

Query: 347  KHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLMLSS 168
            KHMVLDKMHARA GPRV LTRQPTEGRSRDGGLR+GEMERDCLIAYGASMLI+ERL+LSS
Sbjct: 1029 KHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLLSS 1088

Query: 167  DPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            DPYQVQVCRKCGLLGYYNHKLKT++CS CKNGEN+A M LPYACKLLFQEL +MN
Sbjct: 1089 DPYQVQVCRKCGLLGYYNHKLKTSYCSMCKNGENMAKMRLPYACKLLFQELHAMN 1143


>ref|XP_002436683.1| hypothetical protein SORBIDRAFT_10g006995 [Sorghum bicolor]
            gi|241914906|gb|EER88050.1| hypothetical protein
            SORBIDRAFT_10g006995 [Sorghum bicolor]
          Length = 1137

 Score = 1697 bits (4395), Expect = 0.0
 Identities = 843/1136 (74%), Positives = 963/1136 (84%), Gaps = 16/1136 (1%)
 Frame = -1

Query: 3362 YKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHDPT 3183
            Y SL APV+  VDKFALLPAFLKVRGLVKEHIDSF+YFI+ GI KI+EAN R+  R+DP+
Sbjct: 6    YHSLAAPVRKPVDKFALLPAFLKVRGLVKEHIDSFNYFIDKGIKKIVEANNRIEARNDPS 65

Query: 3182 LYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEKRE 3003
            +YL Y  + +G PSI  +   E++TP +CRL+DRTY API V++++T G Q   ++++R 
Sbjct: 66   IYLRYLDVRVGMPSIYENCNVESITPHLCRLTDRTYSAPIEVDIQYTVGKQ--HVVKRRN 123

Query: 3002 GVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKNRI 2823
              +IG MPIMLRSS C+L   DEDELAK GECPLDPGGYF+V+G EKVILIQEQLSKNRI
Sbjct: 124  KFIIGYMPIMLRSSACILNEMDEDELAKYGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 183

Query: 2822 IIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIESDQ 2643
            I+DTDSKGRV ASVTSSTH  KSKTV  M+K KIYLQLNQF+KPIPI++++KAMG+ESDQ
Sbjct: 184  IVDTDSKGRVIASVTSSTHAIKSKTVVLMDKGKIYLQLNQFTKPIPIIVVMKAMGMESDQ 243

Query: 2642 EIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRARN 2463
            E VQM+GRDPRYG LL PSIQEC+++RIYT+QQAL Y+D +V   G+      KEGR+ +
Sbjct: 244  EAVQMVGRDPRYGDLLFPSIQECASERIYTRQQALQYMDEKVMYPGATNN---KEGRSNS 300

Query: 2462 IMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQLIS 2283
            I+ DVF+A+VPV  GN RPKC+Y AVMLRRM+DAILNSDT DDKDYVGNKRFELSGQLIS
Sbjct: 301  ILHDVFIAHVPVKDGNLRPKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRFELSGQLIS 360

Query: 2282 LLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWDLK 2103
            LLFEDLFKTMNS  V+ +N   +K  R++ LDF   I + +  +T GLERA+STGNWD+K
Sbjct: 361  LLFEDLFKTMNSQAVERMNKNSDKT-RSSPLDFSQLIMQDT--ITFGLERAISTGNWDIK 417

Query: 2102 RFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEG 1923
            RFRMHRKGVSQ L RLS++A LG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEG
Sbjct: 418  RFRMHRKGVSQVLSRLSYMATLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEG 477

Query: 1922 EACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLILG 1743
            EACGLTKNLAL++H+TTD++EGPLI LCHSLGVEDL +LS EE+HAP SFLV+ NGLILG
Sbjct: 478  EACGLTKNLALLSHITTDQEEGPLIDLCHSLGVEDLLFLSSEEIHAPGSFLVMLNGLILG 537

Query: 1742 KHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISRIK 1563
            KH+ PQR    +R LRR+  IGEFVSIF+N++Q CV++ASDGGRVCRPL+IAD GISRI 
Sbjct: 538  KHKDPQRLVIHLRNLRRSNVIGEFVSIFINEKQRCVHIASDGGRVCRPLIIADMGISRID 597

Query: 1562 EHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKRITH 1383
            E HM +LRDG   FDDFL  GLIEYLDVNEENNA+I+LYEH D+D      +V+   ITH
Sbjct: 598  ETHMTKLRDGTYDFDDFLSGGLIEYLDVNEENNALIALYEHMDQD------DVERSSITH 651

Query: 1382 IEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLVYPQ 1203
            IEIEP +ILG+V+GLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSL+YLLVY Q
Sbjct: 652  IEIEPLSILGVVSGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQ 711

Query: 1202 RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLKKSS 1023
            RPLLTTKTIELVGYDKLGAGQNATVAVM YSGYDIEDAIVMNKSSLDRGFGRCI LKK +
Sbjct: 712  RPLLTTKTIELVGYDKLGAGQNATVAVMGYSGYDIEDAIVMNKSSLDRGFGRCIALKKYT 771

Query: 1022 VVKEK-----CERIVRPQNE-------QNKQILDADGIGAPGEIIRNHDVYVNKQSPKNA 879
            V+K+       +RIV+PQ +       QN + LD DGI APG+IIRNHD+YVNKQ+P N 
Sbjct: 772  VLKDNYVDGVSDRIVKPQRDKDGVLMKQNMRALDDDGIVAPGQIIRNHDIYVNKQTPMNT 831

Query: 878  TAA----LKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGDK 711
            +      L D  Y D+ A YKG +GETTV+DRVML SD +D+L IK IIRHTRRPEVGDK
Sbjct: 832  SKGIGRPLTDSCYKDSPAIYKGVDGETTVVDRVMLCSDTNDKLSIKCIIRHTRRPEVGDK 891

Query: 710  FSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCG 531
            FSSRHGQKGV GTI+QQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLGGKAGVSCG
Sbjct: 892  FSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCG 951

Query: 530  RFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQK 351
            RFHYGSAFGEPSG+AD V DIS TL+KHGFSY+GKDF+YSGI G PL+AYIFMGPIYYQK
Sbjct: 952  RFHYGSAFGEPSGNADNVADISSTLIKHGFSYNGKDFLYSGILGQPLEAYIFMGPIYYQK 1011

Query: 350  LKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLMLS 171
            LKHMVLDKMHARA GPRV LTRQPTEGRSRDGGLR+GEMERDCLIAYGASMLI+ERLMLS
Sbjct: 1012 LKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMLS 1071

Query: 170  SDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            SDPYQVQVCRKCGLLGYYNHKLKT++CS CKNGEN+A M LPYACKLLFQEL +MN
Sbjct: 1072 SDPYQVQVCRKCGLLGYYNHKLKTSYCSMCKNGENMAKMRLPYACKLLFQELHAMN 1127


>ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera] gi|731414225|ref|XP_010659065.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1157

 Score = 1680 bits (4350), Expect = 0.0
 Identities = 837/1142 (73%), Positives = 951/1142 (83%), Gaps = 16/1142 (1%)
 Frame = -1

Query: 3380 QRHVADYKSLTA-PVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRL 3204
            Q  ++ +K   A PVK AVDKF LLP FLKVRGLVK+H+DSF+YF+   I KI+ AN R+
Sbjct: 19   QEEMSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRI 78

Query: 3203 VCRHDPTLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQAN 3024
            V   DP++YL +  + +G+PSI +D   E L P  CRLSD TY API VN+E+  G+   
Sbjct: 79   VSSVDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQ 138

Query: 3023 KLLEKREGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQE 2844
            K   ++  V+IG+MPIMLRS  CVL  KDE ELA+LGECPLDPGGYF+V+G EKVILIQE
Sbjct: 139  KTRVEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQE 198

Query: 2843 QLSKNRIIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKA 2664
            QLSKNRIIIDTD KG + ASVTSST  TKSKTV  MEK+KI+LQLNQF+  IPIMI++KA
Sbjct: 199  QLSKNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKA 258

Query: 2663 MGIESDQEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVK 2484
            MG+ESDQE+VQM+GR+PRY ALLLPS++EC++  IYTQQQAL++L+ +V         ++
Sbjct: 259  MGMESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLE 318

Query: 2483 KEGRARNIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFE 2304
            KEGR   I+RD F+ANVPV   NFRPKC+Y AVMLRRMMDAILN D MDDKDYVGNKR E
Sbjct: 319  KEGRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLE 378

Query: 2303 LSGQLISLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALS 2124
            LSGQLISLLFEDLFKTM S V  +++    K +R+++ DF   I R S  +T GLER LS
Sbjct: 379  LSGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQFIVRDS--ITVGLERTLS 436

Query: 2123 TGNWDLKRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLC 1944
            TGNWD+KRFRMHRKG+SQ + RLS+I +LGHMT+ISPQFEK+RKVSGPRALQPSQWGMLC
Sbjct: 437  TGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLC 496

Query: 1943 PCDTPEGEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVI 1764
            PCDTPEGEACGL KNLALMTHVTTDE+E PLISLC+SLGVEDL  LSGEELH P SFL+I
Sbjct: 497  PCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLII 556

Query: 1763 FNGLILGKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIAD 1584
            FNGLILGKHR+PQRFANA+RKLRRAGKIGEFVS+FVN++QHCVY+ASDGGRVCRP+VIAD
Sbjct: 557  FNGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIAD 616

Query: 1583 EGISRIKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEV 1404
            +G SRIKEHHMKEL DGVR+FDDFLRDGLIEYLDVNEENNA+I+LYE   K         
Sbjct: 617  KGKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPET------ 670

Query: 1403 DGKRITHIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLI 1224
                 THIEIEPFTILG+ AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL R DSL+
Sbjct: 671  -----THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLL 725

Query: 1223 YLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRC 1044
            YLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRC
Sbjct: 726  YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRC 785

Query: 1043 ITLKKSSVVKEKCE-----RIVRP----QNEQNKQILDADGIGAPGEIIRNHDVYVNKQS 891
            I +KK S V ++ E     RIVRP     + +  QILD DG+ APGEII+ +D+Y+NK+S
Sbjct: 786  IVMKKFSAVNQRYENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKES 845

Query: 890  P------KNATAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRR 729
            P        +   L D  Y  +   +KGPEGE +V+DRV L SD +  LCIKF+IRHTRR
Sbjct: 846  PIITKGPLISPVGLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRR 905

Query: 728  PEVGDKFSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGK 549
            PEVGDKFSSRHGQKGV GTI+QQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGK
Sbjct: 906  PEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGK 965

Query: 548  AGVSCGRFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMG 369
            AGVSCGRFHYGSAFGEPSGHADKVE IS TLVKHGFSYSGKDFIYSGITG PLQAYIFMG
Sbjct: 966  AGVSCGRFHYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMG 1025

Query: 368  PIYYQKLKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIY 189
            PIYYQKLKHMVLDKMHAR  GPRV LTRQPTEGR+R+GGLRVGEMERDCLIAYGASMLI+
Sbjct: 1026 PIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIF 1085

Query: 188  ERLMLSSDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQS 9
            ERLM+SSDP++VQVCR CGLLGYYNHKLK   CS+CKNG+N++TM LPYACKLLFQELQ+
Sbjct: 1086 ERLMVSSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQA 1145

Query: 8    MN 3
            MN
Sbjct: 1146 MN 1147


>ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Sesamum
            indicum]
          Length = 1152

 Score = 1672 bits (4331), Expect = 0.0
 Identities = 824/1136 (72%), Positives = 951/1136 (83%), Gaps = 15/1136 (1%)
 Frame = -1

Query: 3365 DYKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHDP 3186
            D ++L APVK AVDKF LLP FLKVRGLVK+H+DSF+YF+   I KI++AN  +  + DP
Sbjct: 21   DKQALAAPVKNAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSKIDP 80

Query: 3185 TLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEKR 3006
            ++YL Y  + +G+PS+++D   E LTP  CRLSD TY API+VN+E+  G+  +K  + +
Sbjct: 81   SIYLRYKDVRIGEPSVIIDGVTEKLTPHKCRLSDITYAAPIYVNIEYITGSHGSKTTQMK 140

Query: 3005 EGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKNR 2826
              V+IG+MPIMLRS  C+L GKDE+ELA+ GECPLDPGGYF+++G EKVILIQEQLSKNR
Sbjct: 141  RDVIIGRMPIMLRSCCCILYGKDEEELARYGECPLDPGGYFVIKGTEKVILIQEQLSKNR 200

Query: 2825 IIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIESD 2646
            IIIDTD KG V ASVTSST  TKSKTV  MEK+KIYL LNQF+  +PIM++LKAMG+ESD
Sbjct: 201  IIIDTDKKGCVQASVTSSTEMTKSKTVIRMEKEKIYLYLNQFTSKVPIMVVLKAMGMESD 260

Query: 2645 QEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRAR 2466
            QE+VQM+GRDPRY  LLLPSI++C  + ++TQ QAL++L+ +V     + T   KEGRA 
Sbjct: 261  QEVVQMIGRDPRYSELLLPSIEDCVKEAVHTQHQALEFLEQKVKKLPYS-TPADKEGRAL 319

Query: 2465 NIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQLI 2286
             I+RD+FLAN+PV   NFRPKC+Y AVM+RR+++AILN D MDDKDYVGNKR ELSGQL+
Sbjct: 320  GILRDIFLANIPVRQNNFRPKCIYVAVMVRRILEAILNKDAMDDKDYVGNKRLELSGQLL 379

Query: 2285 SLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWDL 2106
            SLLFEDLFKTMN     +++    K +R+++ D    I + S  +T GLER LSTGNWD+
Sbjct: 380  SLLFEDLFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDS--ITVGLERTLSTGNWDV 437

Query: 2105 KRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPE 1926
            KRFRMHRKG++Q + RLS+I  LGHMT+ISPQFEK+RKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 438  KRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 497

Query: 1925 GEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLIL 1746
            GEACGL KNLALMTHVTTD+DEGPLISLC+SLGVEDL  LSGEELH P S+L+I NGLIL
Sbjct: 498  GEACGLVKNLALMTHVTTDDDEGPLISLCYSLGVEDLELLSGEELHMPNSYLIILNGLIL 557

Query: 1745 GKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISRI 1566
            GKHR+PQRFA AMRKLRR+GKIGEFVSIFVN++QH VY+ASDGGRVCRPLVIAD+G+SRI
Sbjct: 558  GKHRRPQRFAKAMRKLRRSGKIGEFVSIFVNEKQHSVYIASDGGRVCRPLVIADKGVSRI 617

Query: 1565 KEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKRIT 1386
            KEHHMKEL+DGVR+FD FL++GLIEYLDVNEENNA+I+LYE           E   +R T
Sbjct: 618  KEHHMKELKDGVRNFDSFLKEGLIEYLDVNEENNALIALYE-----------ENANERTT 666

Query: 1385 HIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLVYP 1206
            HIEIEPFTILGI+AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R D+LIYLLVYP
Sbjct: 667  HIEIEPFTILGIIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYP 726

Query: 1205 QRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLKKS 1026
            QRPLLTT+TIELV +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +KK 
Sbjct: 727  QRPLLTTRTIELVRFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKM 786

Query: 1025 SVVKEKCE-----RIVRPQNE----QNKQILDADGIGAPGEIIRNHDVYVNKQSP----- 888
            + V +K E     RI+RP  E    +  QILD DG+ APGEIIR HD+Y+NK+SP     
Sbjct: 787  TAVSQKYENGTSDRILRPPREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPIVTRG 846

Query: 887  -KNATAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGDK 711
               +   L D  Y  +   YKGP+GET V+DRV L SD ++ LCIKF+IRHTRRPE+GDK
Sbjct: 847  PVTSPMGLPDSAYKPSRQTYKGPDGETPVVDRVALCSDRNNNLCIKFMIRHTRRPELGDK 906

Query: 710  FSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCG 531
            FSSRHGQKGV G IVQQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCG
Sbjct: 907  FSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCG 966

Query: 530  RFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQK 351
            RFHYGSAFGEPSGHADKVE IS TLVKHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQK
Sbjct: 967  RFHYGSAFGEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGEPLQAYIFMGPIYYQK 1026

Query: 350  LKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLMLS 171
            LKHMVLDKMHAR  GPRV +TRQPTEGRSR+GGLRVGEMERDCLIAYGASMLIYERLM+S
Sbjct: 1027 LKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMIS 1086

Query: 170  SDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            SDP++VQVCRKCGLLGYYN KLKT  CS+CKNGEN++TM LPYACKLL QELQ+MN
Sbjct: 1087 SDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLIQELQAMN 1142


>ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
            [Populus euphratica]
          Length = 1150

 Score = 1666 bits (4314), Expect = 0.0
 Identities = 827/1137 (72%), Positives = 951/1137 (83%), Gaps = 13/1137 (1%)
 Frame = -1

Query: 3374 HVAD-YKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVC 3198
            H+ D  K   APVK+AVDKF LLP FLKVRGLVK+H+DSF+YFIN GI KI+ AN R+V 
Sbjct: 17   HLIDKQKHAAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFINIGIKKIVRANDRIVS 76

Query: 3197 RHDPTLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKL 3018
              DP+LYL +T + +GKPS+++D   E +TP MCRLSD TY API+VN+E+  G+   K 
Sbjct: 77   TVDPSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAAPIWVNIEYISGSHGRKE 136

Query: 3017 LEKREGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQL 2838
               +  V+IG+MPIMLRS  CVL GK+E ELA+LGECPLDPGGYF+V+G EKVILIQEQL
Sbjct: 137  KMIKNDVVIGRMPIMLRSCCCVLSGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 196

Query: 2837 SKNRIIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMG 2658
            SKNRIIID D KG + ASVTSST  TKSKTV  MEK+K+YL LNQF+K IPIM+++KAMG
Sbjct: 197  SKNRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMG 256

Query: 2657 IESDQEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKE 2478
            +ESDQE+VQM+GRDPRY ALLLPSI+EC++  +YT++QAL+YL+  V  +  + +  +KE
Sbjct: 257  MESDQEVVQMVGRDPRYSALLLPSIEECASHGVYTREQALEYLEAMVKRSTYSSSSTEKE 316

Query: 2477 GRARNIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELS 2298
             RA  I+RDVF+ANVPV   NFRPKC+Y AVMLRRMM+A+LN D MDDKDYVGNKR ELS
Sbjct: 317  NRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELS 376

Query: 2297 GQLISLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTG 2118
            GQLISLLFEDLFKTM + V    +    K NR+++ DF   I R S  +T GLERALSTG
Sbjct: 377  GQLISLLFEDLFKTMITEVQKIADALLVKQNRSSRFDFSQYIVRDS--ITNGLERALSTG 434

Query: 2117 NWDLKRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPC 1938
            NWD+KRFRM+RKGV+Q L RLS++A+LGHMTRISPQFEK+RKVSGPRALQPSQWGMLCPC
Sbjct: 435  NWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPC 494

Query: 1937 DTPEGEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFN 1758
            DTPEGEACGL KNLALMTHVTTDE+E PLISLC  LGVEDL  LSGEELH P SFLVIFN
Sbjct: 495  DTPEGEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFN 554

Query: 1757 GLILGKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEG 1578
            GLILGKHR+P +FANAMRKLRRAGKIGEFVS+FVN++Q  VY+ASDGGRVCRPLVIAD+G
Sbjct: 555  GLILGKHRRPHQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKG 614

Query: 1577 ISRIKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDG 1398
            +SRIKEHHM+EL DG R+FDDFL +GLIEYLDVNEENNA+I+LYE +             
Sbjct: 615  VSRIKEHHMRELMDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEAT----------- 663

Query: 1397 KRITHIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYL 1218
               THIEIEPFTILG+VAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R DSL+YL
Sbjct: 664  PETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLGRMDSLLYL 723

Query: 1217 LVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIT 1038
            LVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI 
Sbjct: 724  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIV 783

Query: 1037 LKKSSVVKEKCE-----RIVRP-QNEQNKQILDADGIGAPGEIIRNHDVYVNKQS----- 891
            LKK +   +K E     RI+RP +NE+ +++LD DG+ APGEIIR+ D+Y+NK+S     
Sbjct: 784  LKKYTCTNQKYENGASDRILRPRKNEERERVLDDDGLAAPGEIIRHGDIYINKESPIETR 843

Query: 890  -PKNATAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGD 714
             P  + AAL D  Y      +KG EGE+ V+DRV L SD ++ LCIK+ IRHTRRPEVGD
Sbjct: 844  GPLKSAAALADVKYRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGD 903

Query: 713  KFSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSC 534
            KFSSRHGQKGV GTI+QQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSC
Sbjct: 904  KFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSC 963

Query: 533  GRFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQ 354
            GRFHYGSAFGEPSGHAD+VE IS TLVKHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQ
Sbjct: 964  GRFHYGSAFGEPSGHADRVEAISETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQ 1023

Query: 353  KLKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLML 174
            KLKHMVLDKMHAR  GPRV LTRQPT+GR+R+GGLRVGEME+DCL+AYG SML+YERLM+
Sbjct: 1024 KLKHMVLDKMHARGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLLYERLMV 1083

Query: 173  SSDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            SSD ++ QVCR CGLLGYYN KLK A C++CKNG+ ++TM LPYACKLL QELQSMN
Sbjct: 1084 SSDQFEAQVCRACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQSMN 1140


>ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Eucalyptus
            grandis]
          Length = 1152

 Score = 1666 bits (4314), Expect = 0.0
 Identities = 834/1143 (72%), Positives = 951/1143 (83%), Gaps = 22/1143 (1%)
 Frame = -1

Query: 3365 DYKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHDP 3186
            DY+ L AP+K+AVDKF L+P FLKVRGLVK+H+DSF+YF N  I KI+ AN ++V   DP
Sbjct: 13   DYRKLAAPIKSAVDKFQLVPEFLKVRGLVKQHLDSFNYFANTEIKKIVRANDKIVSSVDP 72

Query: 3185 TLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEKR 3006
             LY+ +  + +G P+  ++   E L+PQ CRL+D+TY AP+ V+VE+TKG+     L ++
Sbjct: 73   NLYVRFKDVRIGNPTEALEGIVEDLSPQKCRLTDKTYAAPVLVDVEYTKGSHGGYSLLEK 132

Query: 3005 EGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKNR 2826
              V I +MPIMLRS  CVL  KDEDELA+LGECPLDPGGYF+++G EKVILIQEQLSKNR
Sbjct: 133  NDVTIARMPIMLRSCCCVLFRKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLSKNR 192

Query: 2825 IIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIESD 2646
            IIIDTD KG + ASVTSST  TKSKTV  MEK K+YLQLNQF+K IPIMI++KAM +ESD
Sbjct: 193  IIIDTDKKGNINASVTSSTEATKSKTVVVMEKGKMYLQLNQFAKNIPIMIVMKAMRMESD 252

Query: 2645 QEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRAR 2466
            QE+VQM+GRDPRY ALLL SI+EC++  I+TQQQAL++L+G++     A     KEGRA 
Sbjct: 253  QEVVQMIGRDPRYSALLLQSIEECASLSIFTQQQALEFLEGKLKKLPYANMSTGKEGRAM 312

Query: 2465 NIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQLI 2286
            +I+RDVFLANV V   NFRPKC+Y AVMLRRMM+AILN D MDDKDYVGNKR ELSGQLI
Sbjct: 313  SILRDVFLANVRVIKNNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQLI 372

Query: 2285 SLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWDL 2106
            SLLFEDLFKTM S V    +    K +R++QLD    + +   I+TQGLERALSTGNWD+
Sbjct: 373  SLLFEDLFKTMISEVQKQADNVLSKRSRSSQLDLSMLLVKD--IITQGLERALSTGNWDV 430

Query: 2105 KRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPE 1926
            KRFRMHRKG++Q L RLSFI  LGH+TRISPQFEK+RKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 431  KRFRMHRKGMTQVLARLSFIGTLGHVTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 490

Query: 1925 GEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLIL 1746
            GEACGL KNLALMTHVTTD++EGPLI+LC+ LGVEDL  LSGEELH P SFL+IFNGLIL
Sbjct: 491  GEACGLVKNLALMTHVTTDQEEGPLIALCYCLGVEDLELLSGEELHTPNSFLIIFNGLIL 550

Query: 1745 GKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISRI 1566
            GKHR+PQRFAN MRKLRR G+IGEFVS+FVN++Q CVY+ASDGGRVCRPLVIAD+GISRI
Sbjct: 551  GKHRRPQRFANTMRKLRRIGRIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRI 610

Query: 1565 KEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKRIT 1386
            KEHHMK L DG R+FDDFLR+GL+EYLDVNEENNA+I+LYE   +D+  E         T
Sbjct: 611  KEHHMKGLLDGARTFDDFLREGLVEYLDVNEENNALIALYE---QDATPET--------T 659

Query: 1385 HIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLVYP 1206
            HIEIEPFTILG+ AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL R D+L+YLLVYP
Sbjct: 660  HIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLLRMDTLLYLLVYP 719

Query: 1205 QRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLKKS 1026
            QRPLLTT+TIEL GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +KK 
Sbjct: 720  QRPLLTTRTIELTGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKY 779

Query: 1025 SVVKEKCE-----RIVRP--QNEQNK----------QILDADGIGAPGEIIRNHDVYVNK 897
            S V +K E     RI+RP  ++++NK          QILD DGI APGEIIR +DVY+NK
Sbjct: 780  SAVNQKYENGTSDRILRPPRKDDRNKKGENPDWERMQILDNDGIAAPGEIIRPNDVYINK 839

Query: 896  QSP-----KNATAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTR 732
            +SP           LKD DY  +   +KG EGE+ V+DRV L SD +  L IKF+IRHTR
Sbjct: 840  ESPIITKGNPKLGGLKDSDYKPSRQTFKGAEGESCVVDRVTLSSDKNYNLSIKFMIRHTR 899

Query: 731  RPEVGDKFSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGG 552
            RPEVGDKFSSRHGQKGV GTIVQQEDFPFSE GICPDLIMNPHG+PSRMT+GKMIELLGG
Sbjct: 900  RPEVGDKFSSRHGQKGVCGTIVQQEDFPFSEHGICPDLIMNPHGFPSRMTVGKMIELLGG 959

Query: 551  KAGVSCGRFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFM 372
            KAGVSCGRFHYGSAFGEPSGHAD+VE IS TLVKHGFSY+GKDF+YSGITG PLQAYIFM
Sbjct: 960  KAGVSCGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYNGKDFLYSGITGCPLQAYIFM 1019

Query: 371  GPIYYQKLKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLI 192
            GPIYYQKLKHMVLDKMHAR  GPRV LTRQPTEGR+R+GGLRVGEMERDCLIAYGASMLI
Sbjct: 1020 GPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI 1079

Query: 191  YERLMLSSDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQ 12
            YERLMLSSDP++VQVCR CGLLGYYN+KLKT  CSSCKNG+N++TM LPYACKLL QELQ
Sbjct: 1080 YERLMLSSDPFEVQVCRACGLLGYYNYKLKTGICSSCKNGDNISTMKLPYACKLLIQELQ 1139

Query: 11   SMN 3
            SMN
Sbjct: 1140 SMN 1142


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1666 bits (4314), Expect = 0.0
 Identities = 827/1136 (72%), Positives = 949/1136 (83%), Gaps = 15/1136 (1%)
 Frame = -1

Query: 3365 DYKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHDP 3186
            D + L AP+K+AVDKF LLP FLKVRGLVK+H+DSF+YF+N GI KI+ AN R+V   DP
Sbjct: 25   DKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGVDP 84

Query: 3185 TLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEKR 3006
            ++YL +  + +G+PS+ ++   E + P  CRLSD TY APIFVN+E+ +G+   K   ++
Sbjct: 85   SIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGSHGQKTRLEK 144

Query: 3005 EGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKNR 2826
              ++IG+MPIMLRS  CVL GKDE ELA+LGECPLDPGGYF+++G EKVILIQEQLSKNR
Sbjct: 145  NDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNR 204

Query: 2825 IIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIESD 2646
            IIID D KG + ASVTSS+  TKSKTV  MEK+KIYL LNQF K IPIM+++KAMG+ESD
Sbjct: 205  IIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGMESD 264

Query: 2645 QEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRAR 2466
            QE+VQM+GRDP Y A+LLPSI+EC+   IYTQ+QAL+YL+ +V          +KEGRA 
Sbjct: 265  QEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGRAL 324

Query: 2465 NIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQLI 2286
            +I+RDVFLANVPV   NFRPKC+Y AVMLRRM++AILN D MDDKDYVGNKR ELSGQLI
Sbjct: 325  SILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKRLELSGQLI 384

Query: 2285 SLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWDL 2106
            SLLFEDLFKT  S V   +++   K +R++ LD    ++ + TI T GLER LSTGN+D+
Sbjct: 385  SLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETI-TFGLERTLSTGNFDI 443

Query: 2105 KRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPE 1926
            KRF+MHRKG++Q L RLSFI  LG+MT++SPQFEK+RKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 444  KRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 503

Query: 1925 GEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLIL 1746
            GEACGL KNLALMTHVTTDEDEGPLISLC+ LGVEDL  LSGEELH P SFLVI NGLIL
Sbjct: 504  GEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLVILNGLIL 563

Query: 1745 GKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISRI 1566
            GKHR+PQ FA AMRKLRRAGK+GEFVS+FVN++Q CVY+ASDGGRVCRPLVIAD+G+SRI
Sbjct: 564  GKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGVSRI 623

Query: 1565 KEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKRIT 1386
            KEHHMKEL DGVR+FDDFLRDGLIEYLDVNEENNA+I+LYE       GE         T
Sbjct: 624  KEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYE-------GEATP----ETT 672

Query: 1385 HIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLVYP 1206
            HIEIEPFTILG+ AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R D+L+YLLVYP
Sbjct: 673  HIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYP 732

Query: 1205 QRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLKKS 1026
            QRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +K+ 
Sbjct: 733  QRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRY 792

Query: 1025 SVVKEKCE-----RIVRPQN----EQNKQILDADGIGAPGEIIRNHDVYVNKQSP----- 888
            S V +K E     RI+RPQ      +  QILD DGI  PGEIIR +D+Y+NK+S      
Sbjct: 793  SAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRG 852

Query: 887  -KNATAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGDK 711
             + ++ +L D  Y      YKGPEGE+ V+DRV L +D +  L IKF+IRHTRRPEVGDK
Sbjct: 853  SRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDK 912

Query: 710  FSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCG 531
            FSSRHGQKGV GTI+QQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCG
Sbjct: 913  FSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCG 972

Query: 530  RFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQK 351
            RFHYGSAFGEPSGHAD+VE IS TL+KHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQK
Sbjct: 973  RFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQK 1032

Query: 350  LKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLMLS 171
            LKHMVLDKMHAR  GPRV LTRQPTEGR+R+GGLRVGEMERDCLIAYGASMLI+ERLM+S
Sbjct: 1033 LKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMIS 1092

Query: 170  SDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            SDP++VQVCRKCGLLGYY+HKLKT  CSSCKNG+N++TM LPYACKLL QELQSMN
Sbjct: 1093 SDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMN 1148


>ref|XP_004141655.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Cucumis
            sativus]
          Length = 1158

 Score = 1665 bits (4313), Expect = 0.0
 Identities = 831/1135 (73%), Positives = 948/1135 (83%), Gaps = 14/1135 (1%)
 Frame = -1

Query: 3365 DYKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHDP 3186
            D + +  P+K+AVDKF LLP FLKVRGLVK+H+DSF+YF+N  I KI++AN R+    DP
Sbjct: 27   DKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIESSTDP 86

Query: 3185 TLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEKR 3006
            ++YL +  + +G+PS+ ++   E + P MCRLSD TY API V++E+ + + A K   ++
Sbjct: 87   SIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHAQKAPREK 146

Query: 3005 EGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKNR 2826
            + V+IG+MPIMLRS  CVL GKDE ELA+LGECPLDPGGYFI++G EKV+LIQEQLSKNR
Sbjct: 147  KDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLSKNR 206

Query: 2825 IIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKP-IPIMIILKAMGIES 2649
            IIIDTD KG + ASVTSST  TKSKTV  ME +KIYLQLN F+ P IPIM++LKAMG+ES
Sbjct: 207  IIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGMES 266

Query: 2648 DQEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRA 2469
             QE+VQM+GRDPRYGALLLPSI+EC+ ++IYTQ+QAL+YL+ +V     A    +KEGRA
Sbjct: 267  IQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAPPEKEGRA 326

Query: 2468 RNIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQL 2289
              I+RDVFLANVPV   NF PKC+Y AVM+RRMMDAIL+ D MDDKDYVGNKR ELSGQL
Sbjct: 327  LGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLELSGQL 386

Query: 2288 ISLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWD 2109
            ISLLFEDLFKTM S V  +++    K +R+++ DF   +   S I++ GLER LSTGNWD
Sbjct: 387  ISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLN--SNIISFGLERTLSTGNWD 444

Query: 2108 LKRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTP 1929
            +KRFRMHRKG+SQ L RLSFI+ +GH+TR+SPQFEK+RKVSGPRALQPSQWGMLCPCDTP
Sbjct: 445  VKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 504

Query: 1928 EGEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLI 1749
            EGEACGL KNLALMTHVTTD++EGPLISLC+ LGVEDL  LS EELH P SFLVIFNG I
Sbjct: 505  EGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNGRI 564

Query: 1748 LGKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISR 1569
            LGKHR+PQ FA  MR LRRAGKIGEFVS+FVN++QHCVY+ASDGGRVCRPLVIAD+G+SR
Sbjct: 565  LGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGVSR 624

Query: 1568 IKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKRI 1389
            IKE+HMKEL DGVR+FDDFLRDGLIEYLDVNEENNA+I+LYE       GE         
Sbjct: 625  IKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYE-------GEATP----ET 673

Query: 1388 THIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLVY 1209
            THIEIEPFTILG+VAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R D+L+YLLVY
Sbjct: 674  THIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVY 733

Query: 1208 PQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLKK 1029
            PQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI  KK
Sbjct: 734  PQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKK 793

Query: 1028 SSVVKEKCE-----RIVRPQNEQ----NKQILDADGIGAPGEIIRNHDVYVNKQSP---- 888
             S V +K E     RIVRP   +    N QILD DG+ APGEIIR +D+YVNKQSP    
Sbjct: 794  YSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIITK 853

Query: 887  KNATAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGDKF 708
             +    + D  Y      +KG EGE TV+DRV L +D +D LCIKF+IR TRRPE+GDKF
Sbjct: 854  GSPLPGIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKF 913

Query: 707  SSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGR 528
            SSRHGQKGV GTIVQQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGR
Sbjct: 914  SSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGR 973

Query: 527  FHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQKL 348
            FHYGSAFGEPSGHADKV+ IS TL+K GFSY+GKDF+YSGITG PLQAYIFMGPIYYQKL
Sbjct: 974  FHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKL 1033

Query: 347  KHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLMLSS 168
            KHMVLDKMHAR  GPRV LTRQPTEGR+R+GGLRVGEMERDCLIAYGASMLIYERLM+SS
Sbjct: 1034 KHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISS 1093

Query: 167  DPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            DP++VQVCR CGLLGYYNHKLKT  CSSCKNG+N++TM LPYACKLL QELQSMN
Sbjct: 1094 DPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMN 1148


>ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
            [Populus euphratica]
          Length = 1151

 Score = 1663 bits (4307), Expect = 0.0
 Identities = 829/1138 (72%), Positives = 952/1138 (83%), Gaps = 14/1138 (1%)
 Frame = -1

Query: 3374 HVAD-YKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVC 3198
            H+ D  K   APVK+AVDKF LLP FLKVRGLVK+H+DSF+YFIN GI KI+ AN R+V 
Sbjct: 17   HLIDKQKHAAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFINIGIKKIVRANDRIVS 76

Query: 3197 RHDPTLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKL 3018
              DP+LYL +T + +GKPS+++D   E +TP MCRLSD TY API+VN+E+  G+   K 
Sbjct: 77   TVDPSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAAPIWVNIEYISGSHGRKE 136

Query: 3017 LEKREGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQL 2838
               +  V+IG+MPIMLRS  CVL GK+E ELA+LGECPLDPGGYF+V+G EKVILIQEQL
Sbjct: 137  KMIKNDVVIGRMPIMLRSCCCVLSGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 196

Query: 2837 SKNRIIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMG 2658
            SKNRIIID D KG + ASVTSST  TKSKTV  MEK+K+YL LNQF+K IPIM+++KAMG
Sbjct: 197  SKNRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMG 256

Query: 2657 IESDQEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVG-SAGSARTGVKK 2481
            +ESDQE+VQM+GRDPRY ALLLPSI+EC++  +YT++QAL+YL+  V  S  S+ +  K+
Sbjct: 257  MESDQEVVQMVGRDPRYSALLLPSIEECASHGVYTREQALEYLEAMVKRSTYSSSSTEKQ 316

Query: 2480 EGRARNIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFEL 2301
            E RA  I+RDVF+ANVPV   NFRPKC+Y AVMLRRMM+A+LN D MDDKDYVGNKR EL
Sbjct: 317  ENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLEL 376

Query: 2300 SGQLISLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALST 2121
            SGQLISLLFEDLFKTM + V    +    K NR+++ DF   I R S  +T GLERALST
Sbjct: 377  SGQLISLLFEDLFKTMITEVQKIADALLVKQNRSSRFDFSQYIVRDS--ITNGLERALST 434

Query: 2120 GNWDLKRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCP 1941
            GNWD+KRFRM+RKGV+Q L RLS++A+LGHMTRISPQFEK+RKVSGPRALQPSQWGMLCP
Sbjct: 435  GNWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCP 494

Query: 1940 CDTPEGEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIF 1761
            CDTPEGEACGL KNLALMTHVTTDE+E PLISLC  LGVEDL  LSGEELH P SFLVIF
Sbjct: 495  CDTPEGEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIF 554

Query: 1760 NGLILGKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADE 1581
            NGLILGKHR+P +FANAMRKLRRAGKIGEFVS+FVN++Q  VY+ASDGGRVCRPLVIAD+
Sbjct: 555  NGLILGKHRRPHQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADK 614

Query: 1580 GISRIKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVD 1401
            G+SRIKEHHM+EL DG R+FDDFL +GLIEYLDVNEENNA+I+LYE +            
Sbjct: 615  GVSRIKEHHMRELMDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPET------- 667

Query: 1400 GKRITHIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIY 1221
                THIEIEPFTILG+VAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R DSL+Y
Sbjct: 668  ----THIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLGRMDSLLY 723

Query: 1220 LLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 1041
            LLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI
Sbjct: 724  LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCI 783

Query: 1040 TLKKSSVVKEKCE-----RIVRPQ-NEQNKQILDADGIGAPGEIIRNHDVYVNKQSP--- 888
             LKK +   +K E     RI+RP+ NE+ +++LD DG+ APGEIIR+ D+Y+NK+SP   
Sbjct: 784  VLKKYTCTNQKYENGASDRILRPRKNEERERVLDDDGLAAPGEIIRHGDIYINKESPIET 843

Query: 887  ---KNATAALKDQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVG 717
                 + AAL D  Y      +KG EGE+ V+DRV L SD ++ LCIK+ IRHTRRPEVG
Sbjct: 844  RGPLKSAAALADVKYRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVG 903

Query: 716  DKFSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVS 537
            DKFSSRHGQKGV GTI+QQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVS
Sbjct: 904  DKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVS 963

Query: 536  CGRFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYY 357
            CGRFHYGSAFGEPSGHAD+VE IS TLVKHGFSY+GKDFIYSGITG PLQAYIFMGPIYY
Sbjct: 964  CGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYY 1023

Query: 356  QKLKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLM 177
            QKLKHMVLDKMHAR  GPRV LTRQPT+GR+R+GGLRVGEME+DCL+AYG SML+YERLM
Sbjct: 1024 QKLKHMVLDKMHARGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLLYERLM 1083

Query: 176  LSSDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            +SSD ++ QVCR CGLLGYYN KLK A C++CKNG+ ++TM LPYACKLL QELQSMN
Sbjct: 1084 VSSDQFEAQVCRACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQSMN 1141


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1663 bits (4307), Expect = 0.0
 Identities = 825/1136 (72%), Positives = 945/1136 (83%), Gaps = 15/1136 (1%)
 Frame = -1

Query: 3365 DYKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHDP 3186
            D + L APVK+ VDKF LLP FLKVRGLVK+H+DSF+YF+N GI KI+ AN R+V   DP
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDP 76

Query: 3185 TLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEKR 3006
            +++L +  + +G+PS+ +D   E L P MCRLSD TY API VN+E+ +G+   K   ++
Sbjct: 77   SIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEK 136

Query: 3005 EGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKNR 2826
              V+IG++PIMLRS  CVL GKDE ELA+LGECPLDPGGYFI++G EKV+LIQEQLSKNR
Sbjct: 137  NDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNR 196

Query: 2825 IIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIESD 2646
            +IIDTD KG + ASVTSST   KSKTV  MEK K+YL LNQF K IPIM+++KAMGIESD
Sbjct: 197  VIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIESD 256

Query: 2645 QEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRAR 2466
            QE+VQM+GRDPRY ALLLPSI+EC+   IYTQ++AL+YL+G+V  +        +EGRA 
Sbjct: 257  QEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAF 316

Query: 2465 NIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQLI 2286
            +I+RDVFLANVPV + NFRPKC Y AVMLRRM++A+LN D MDDKDYVGNKR ELSGQL+
Sbjct: 317  SILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLV 376

Query: 2285 SLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWDL 2106
            SLLFEDLFKTM S V  +V++   K +R+++ D    I R S  +T GLER LSTGN+D+
Sbjct: 377  SLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDS--ITVGLERTLSTGNFDV 434

Query: 2105 KRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPE 1926
            KRF+MHRKG++Q L RLSFI  LGHMTR+SPQFEK+RKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 435  KRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 494

Query: 1925 GEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLIL 1746
            GEACGL KNLALMTHVTTDE+EGPLISLC+ LGVEDL  LSGEELH P SFLVIFNGLIL
Sbjct: 495  GEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLIL 554

Query: 1745 GKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISRI 1566
            GKHR+P+ FA+ MRKLRRAGKIGEFVS+FVN++Q CVY+ASDGGRVCRPLVIAD+GISRI
Sbjct: 555  GKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRI 614

Query: 1565 KEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKRIT 1386
            KEHHMKEL DGVRSFDDFLR+GLIEYLDVNEENNA+I+LYE                  T
Sbjct: 615  KEHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDT-----------T 663

Query: 1385 HIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLVYP 1206
            HIEIEPFTILG++AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL R DSL+YLLVYP
Sbjct: 664  HIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYP 723

Query: 1205 QRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLKKS 1026
            QRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +KK 
Sbjct: 724  QRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKY 783

Query: 1025 SVVKEK-----CERIVRPQNE----QNKQILDADGIGAPGEIIRNHDVYVNKQSPKNATA 873
            + + +K      +RI+RP       +  QILD DG+ APGEII+ +DVY+NK+SP     
Sbjct: 784  TAINQKYANSTSDRILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRG 843

Query: 872  ALK------DQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGDK 711
            ++       D  Y      YKGP+GET V+DRV L SD +  LCIKF+IRHTRRPE+GDK
Sbjct: 844  SIMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDK 903

Query: 710  FSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCG 531
            FSSRHGQKGV GTIVQQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCG
Sbjct: 904  FSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCG 963

Query: 530  RFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQK 351
            RFHYGSAFGEPSGHAD VE IS TLVKHGFSY+GKD IYSGITG PLQAYIFMGPIYYQK
Sbjct: 964  RFHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQK 1023

Query: 350  LKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLMLS 171
            LKHMVLDKMHAR  GPRV LTRQPTEGR+R+GGLRVGEMERDCLIAYGASMLI+ERLM+S
Sbjct: 1024 LKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVS 1083

Query: 170  SDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            SDP++VQVCR CGLLGYYNHKLK   CS+CKNG+N+++M LPYACKLL QELQSMN
Sbjct: 1084 SDPFEVQVCRVCGLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMN 1139


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1662 bits (4304), Expect = 0.0
 Identities = 824/1136 (72%), Positives = 944/1136 (83%), Gaps = 15/1136 (1%)
 Frame = -1

Query: 3365 DYKSLTAPVKTAVDKFALLPAFLKVRGLVKEHIDSFDYFINHGIHKILEANRRLVCRHDP 3186
            D + L APVK+ VDKF LLP FLKVRGLVK+H+DSF+YF+N GI KI+ AN R+V   DP
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDP 76

Query: 3185 TLYLEYTKIYLGKPSIMMDLQREALTPQMCRLSDRTYVAPIFVNVEFTKGNQANKLLEKR 3006
            +++L +  + +G+PS+ +D   E L P MCRLSD TY API VN+E+ +G+   K   ++
Sbjct: 77   SIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEK 136

Query: 3005 EGVLIGQMPIMLRSSLCVLKGKDEDELAKLGECPLDPGGYFIVRGNEKVILIQEQLSKNR 2826
              V+IG++PIMLRS  CVL GKDE ELA+LGECPLDPGGYFI++G EKV+LIQEQLSKNR
Sbjct: 137  NDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNR 196

Query: 2825 IIIDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFSKPIPIMIILKAMGIESD 2646
            +IIDTD KG + ASVTSST   KSKTV  MEK K+YL LNQF K IPIM+++KAMG+ESD
Sbjct: 197  VIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGMESD 256

Query: 2645 QEIVQMLGRDPRYGALLLPSIQECSAKRIYTQQQALDYLDGEVGSAGSARTGVKKEGRAR 2466
            QE+VQM+GRDPRY ALLLPSI+EC+   IYTQ++AL+YL+G+V  +        +EGRA 
Sbjct: 257  QEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAF 316

Query: 2465 NIMRDVFLANVPVSHGNFRPKCVYAAVMLRRMMDAILNSDTMDDKDYVGNKRFELSGQLI 2286
            +I+RDVFLANVPV + NFRPKC Y AVMLRRM++A+LN D MDDKDYVGNKR ELSGQL+
Sbjct: 317  SILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLV 376

Query: 2285 SLLFEDLFKTMNSTVVDSVNMAYEKANRANQLDFIGPIQRQSTILTQGLERALSTGNWDL 2106
            SLLFEDLFKTM S V  +V++   K +R+++ D    I R S  +T GLER LSTGN+D+
Sbjct: 377  SLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDS--ITVGLERTLSTGNFDV 434

Query: 2105 KRFRMHRKGVSQGLCRLSFIAALGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPE 1926
            KRF+MHRKG++Q L RLSFI  LGHMTR+SPQFEK+RKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 435  KRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 494

Query: 1925 GEACGLTKNLALMTHVTTDEDEGPLISLCHSLGVEDLAYLSGEELHAPTSFLVIFNGLIL 1746
            GEACGL KNLALMTHVTTDE+EGPLISLC+ LGVEDL  LSGEELH P SFLVIFNGLIL
Sbjct: 495  GEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLIL 554

Query: 1745 GKHRQPQRFANAMRKLRRAGKIGEFVSIFVNDQQHCVYVASDGGRVCRPLVIADEGISRI 1566
            GKHR+P+ FA+ MRKLRRAGKIGEFVS+FVN++Q CVY+ASDGGRVCRPLVIAD+GISRI
Sbjct: 555  GKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRI 614

Query: 1565 KEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNAVISLYEHQDKDSIGEKNEVDGKRIT 1386
            KEHHMKEL DGVRSFDDFLR+GLIEYLDVNEENNA+I+LYE                  T
Sbjct: 615  KEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDT-----------T 663

Query: 1385 HIEIEPFTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLIYLLVYP 1206
            HIEIEPFTILG++AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL R DSL+YLLVYP
Sbjct: 664  HIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYP 723

Query: 1205 QRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCITLKKS 1026
            QRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +KK 
Sbjct: 724  QRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKY 783

Query: 1025 SVVKEK-----CERIVRPQN----EQNKQILDADGIGAPGEIIRNHDVYVNKQSPKNATA 873
            + + +K      +RI+RP       +  QILD DG+ APGEII+ +DVY+NK+SP     
Sbjct: 784  TAINQKYANSTSDRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLETRG 843

Query: 872  ALK------DQDYIDTNAKYKGPEGETTVIDRVMLFSDADDRLCIKFIIRHTRRPEVGDK 711
            ++       D  Y      YKGP+GET V+DRV L SD +  LCIKF+IRHTRRPE+GDK
Sbjct: 844  SIMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDK 903

Query: 710  FSSRHGQKGVVGTIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCG 531
            FSSRHGQKGV GTIVQQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCG
Sbjct: 904  FSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCG 963

Query: 530  RFHYGSAFGEPSGHADKVEDISYTLVKHGFSYSGKDFIYSGITGYPLQAYIFMGPIYYQK 351
            RFHYGSAFGEPSGHAD VE IS TLVKHGFSY+GKD IYSGITG PLQAYIFMGPIYYQK
Sbjct: 964  RFHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQK 1023

Query: 350  LKHMVLDKMHARARGPRVTLTRQPTEGRSRDGGLRVGEMERDCLIAYGASMLIYERLMLS 171
            LKHMVLDKMHAR  GPRV LTRQPTEGR+R+GGLRVGEMERDCLIAYGASMLI+ERLM+S
Sbjct: 1024 LKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVS 1083

Query: 170  SDPYQVQVCRKCGLLGYYNHKLKTAFCSSCKNGENLATMTLPYACKLLFQELQSMN 3
            SDP++VQVCR CGLLGYYNHKLK   CS+CKNG N+++M LPYACKLL QELQSMN
Sbjct: 1084 SDPFEVQVCRVCGLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMN 1139