BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00002123
         (647 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010922087.1| PREDICTED: chloroplastic group IIA intron sp...    85   1e-23
ref|XP_010922117.1| PREDICTED: chloroplastic group IIA intron sp...    85   1e-23
ref|XP_009418129.1| PREDICTED: chloroplastic group IIA intron sp...    79   4e-23
ref|XP_009418130.1| PREDICTED: chloroplastic group IIA intron sp...    79   4e-23
gb|KMZ75641.1| Chloroplastic group IIA intron splicing facilitat...    80   2e-22
ref|XP_010270810.1| PREDICTED: chloroplastic group IIA intron sp...    74   1e-19
ref|XP_010660411.1| PREDICTED: chloroplastic group IIA intron sp...    71   2e-19
ref|XP_010660413.1| PREDICTED: chloroplastic group IIA intron sp...    71   2e-19
ref|XP_002444215.1| hypothetical protein SORBIDRAFT_07g015120 [S...    74   2e-19
emb|CBI33632.3| unnamed protein product [Vitis vinifera]               71   2e-19
gb|KNA06242.1| hypothetical protein SOVF_182920 [Spinacia oleracea]    63   1e-18
ref|XP_004973284.1| PREDICTED: chloroplastic group IIA intron sp...    70   2e-18
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...    69   2e-18
ref|XP_006660084.1| PREDICTED: chloroplastic group IIA intron sp...    69   2e-18
ref|XP_007139175.1| hypothetical protein PHAVU_008G007700g [Phas...    69   5e-18
ref|XP_008648226.1| PREDICTED: chloroplastic group IIA intron sp...    67   9e-18
ref|XP_008648227.1| PREDICTED: chloroplastic group IIA intron sp...    67   9e-18
ref|XP_008648229.1| PREDICTED: chloroplastic group IIA intron sp...    67   9e-18
tpg|DAA49209.1| TPA: chloroplast RNA splicing1 [Zea mays]              67   9e-18
ref|NP_001105008.1| chloroplastic group IIA intron splicing faci...    67   9e-18

>ref|XP_010922087.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X1 [Elaeis guineensis]
           gi|743757464|ref|XP_010922095.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X1 [Elaeis guineensis]
           gi|743757467|ref|XP_010922108.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X1 [Elaeis guineensis]
          Length = 796

 Score = 84.7 bits (208), Expect(2) = 1e-23
 Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 12/124 (9%)
 Frame = -3

Query: 429 STSNIGTFSEFKDIQANYMPLNNGTSTEKITIEAEKVKLAKEL--NDXXXXXXXXXXXXX 256
           STS +GT++EF+DIQ+ Y  +N+G   EKI  EAE+ KL KE+   +             
Sbjct: 556 STSTVGTYTEFQDIQSKYTAVNSGIPEEKIQFEAERAKLEKEIGKQEHELFILKQKIEKS 615

Query: 255 XXXXXXLNSSWHPSEQSADRELLTG*ERQAFQKIDMKMDEFLLR----------GNMNQH 106
                 LNSSW P +Q+AD+ELLT  ER+ F+ I +KMDE LL           GN++QH
Sbjct: 616 EKELAKLNSSWSPLDQAADQELLTEEERRTFRNIGLKMDESLLLGRRGIYDGVIGNIHQH 675

Query: 105 ESSK 94
              K
Sbjct: 676 WKHK 679



 Score = 52.8 bits (125), Expect(2) = 1e-23
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVA 545
           ++RL GGVLILRNK FIILYRGKDFL G+VA
Sbjct: 491 LKRLTGGVLILRNKDFIILYRGKDFLSGRVA 521


>ref|XP_010922117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X2 [Elaeis guineensis]
           gi|743757471|ref|XP_010922126.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X2 [Elaeis guineensis]
          Length = 783

 Score = 84.7 bits (208), Expect(2) = 1e-23
 Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 12/124 (9%)
 Frame = -3

Query: 429 STSNIGTFSEFKDIQANYMPLNNGTSTEKITIEAEKVKLAKEL--NDXXXXXXXXXXXXX 256
           STS +GT++EF+DIQ+ Y  +N+G   EKI  EAE+ KL KE+   +             
Sbjct: 556 STSTVGTYTEFQDIQSKYTAVNSGIPEEKIQFEAERAKLEKEIGKQEHELFILKQKIEKS 615

Query: 255 XXXXXXLNSSWHPSEQSADRELLTG*ERQAFQKIDMKMDEFLLR----------GNMNQH 106
                 LNSSW P +Q+AD+ELLT  ER+ F+ I +KMDE LL           GN++QH
Sbjct: 616 EKELAKLNSSWSPLDQAADQELLTEEERRTFRNIGLKMDESLLLGRRGIYDGVIGNIHQH 675

Query: 105 ESSK 94
              K
Sbjct: 676 WKHK 679



 Score = 52.8 bits (125), Expect(2) = 1e-23
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVA 545
           ++RL GGVLILRNK FIILYRGKDFL G+VA
Sbjct: 491 LKRLTGGVLILRNKDFIILYRGKDFLSGRVA 521


>ref|XP_009418129.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 769

 Score = 79.3 bits (194), Expect(2) = 4e-23
 Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
 Frame = -3

Query: 540 VHERELKFRDQQLXXXXXXXXXXXXXKSLNAIDESVCSTSNIGTFSEFKDIQANYMPLNN 361
           + ERE +  +QQL              SL A+D  + S S +GT+ EF++IQAN++ LNN
Sbjct: 511 IDEREAELNEQQLEEEKARTGFTN---SLRAMDNILPSFSIVGTYMEFQEIQANHISLNN 567

Query: 360 GTSTEKITIEAEKVKLAKEL--NDXXXXXXXXXXXXXXXXXXXLNSSWHPSEQSADRELL 187
            +   +I IEAE+ KL KEL  ++                   L+ S  PSEQ+AD E+L
Sbjct: 568 LSYRGQIRIEAEREKLKKELREHEHKLFILKQKIERSEELLSKLSLSCCPSEQTADLEIL 627

Query: 186 TG*ERQAFQKIDMKMDEFLLRG 121
           T  ERQAF+K+ ++M+E +L G
Sbjct: 628 TEEERQAFRKVGLEMNEIILLG 649



 Score = 56.2 bits (134), Expect(2) = 4e-23
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKV 548
           ++RL GGVLILRNKFFIILYRGKDFLPG V
Sbjct: 478 LKRLTGGVLILRNKFFIILYRGKDFLPGGV 507


>ref|XP_009418130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 768

 Score = 79.3 bits (194), Expect(2) = 4e-23
 Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
 Frame = -3

Query: 540 VHERELKFRDQQLXXXXXXXXXXXXXKSLNAIDESVCSTSNIGTFSEFKDIQANYMPLNN 361
           + ERE +  +QQL              SL A+D  + S S +GT+ EF++IQAN++ LNN
Sbjct: 510 IDEREAELNEQQLEEEKARTGFTN---SLRAMDNILPSFSIVGTYMEFQEIQANHISLNN 566

Query: 360 GTSTEKITIEAEKVKLAKEL--NDXXXXXXXXXXXXXXXXXXXLNSSWHPSEQSADRELL 187
            +   +I IEAE+ KL KEL  ++                   L+ S  PSEQ+AD E+L
Sbjct: 567 LSYRGQIRIEAEREKLKKELREHEHKLFILKQKIERSEELLSKLSLSCCPSEQTADLEIL 626

Query: 186 TG*ERQAFQKIDMKMDEFLLRG 121
           T  ERQAF+K+ ++M+E +L G
Sbjct: 627 TEEERQAFRKVGLEMNEIILLG 648



 Score = 56.2 bits (134), Expect(2) = 4e-23
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKV 548
           ++RL GGVLILRNKFFIILYRGKDFLPG V
Sbjct: 477 LKRLTGGVLILRNKFFIILYRGKDFLPGGV 506


>gb|KMZ75641.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Zostera
           marina]
          Length = 736

 Score = 80.1 bits (196), Expect(2) = 2e-22
 Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
 Frame = -3

Query: 444 DESVCSTSNIGTFSEFKDIQANYMPLNNGTSTEKITIEAEKVKLAKEL--NDXXXXXXXX 271
           DE  C+T NIGTF+EFKD+Q N   L    S   I + AEK KL KEL   D        
Sbjct: 497 DEMQCTTRNIGTFAEFKDLQTNSNTLEEKDSNVNIEMVAEKEKLEKELRKEDHQLSQLKL 556

Query: 270 XXXXXXXXXXXLNSSWHPSEQSADRELLTG*ERQAFQKIDMKMDEFLLRGNMNQHES 100
                      LN++W PSEQ+ D+E+LT  E+Q F KI +KM+E +  G    +++
Sbjct: 557 KLARSELALAKLNAAWTPSEQTLDQEMLTDEEKQVFLKIGLKMNEVIFLGRRGIYDA 613



 Score = 53.1 bits (126), Expect(2) = 2e-22
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = -2

Query: 646 SS*MQRLAGGVLILRNKFFIILYRGKDFLPGKVA 545
           SS ++RL GG+LILRNK+ IILYRGKDFLP  VA
Sbjct: 431 SSELKRLTGGILILRNKYIIILYRGKDFLPNGVA 464


>ref|XP_010270810.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Nelumbo nucifera]
           gi|720047420|ref|XP_010270811.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Nelumbo nucifera]
          Length = 801

 Score = 73.9 bits (180), Expect(2) = 1e-19
 Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
 Frame = -3

Query: 459 SLNAIDESVCSTSNIGTFSEFKDIQANYMPLNNGTSTEKITIEAEKVKLAKEL--NDXXX 286
           S + +DE++ STS IGTFSEF+DIQ   +  +N +    I   AEK KL KEL   +   
Sbjct: 549 SFHILDETLTSTSAIGTFSEFQDIQKKCIWNDNKSRDIDIKTAAEKEKLEKELRKQERML 608

Query: 285 XXXXXXXXXXXXXXXXLNSSWHPSEQSADRELLTG*ERQAFQKIDMKMDEFLLRG 121
                           LN +W  SE  ADRE++T  ER+ F+KI +KMD+FL+ G
Sbjct: 609 FILKMKIKKSAKELAKLNLAWKHSEHVADREIITEEERECFRKIGLKMDKFLVLG 663



 Score = 50.1 bits (118), Expect(2) = 1e-19
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVA 545
           ++ L GGVLILRNKF IILYRGKDFLP  VA
Sbjct: 492 LKHLTGGVLILRNKFLIILYRGKDFLPCGVA 522


>ref|XP_010660411.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X1 [Vitis vinifera]
           gi|731417745|ref|XP_010660412.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X1 [Vitis vinifera]
          Length = 828

 Score = 71.2 bits (173), Expect(2) = 2e-19
 Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
 Frame = -3

Query: 444 DESVCSTSNIGTFSEFKDIQANYMPLNNGTSTEKITIEAEKVKLAKELN--DXXXXXXXX 271
           D+ + +TS  GT SEF++I+  +  L +G +  ++ +EAEK +L KEL   +        
Sbjct: 548 DKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILKR 607

Query: 270 XXXXXXXXXXXLNSSWHPSEQSADRELLTG*ERQAFQKIDMKMDEFLLRG 121
                      LNS+W P++  AD+E++T  ER+ F+KI  KMD  LL G
Sbjct: 608 KIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLG 657



 Score = 52.0 bits (123), Expect(2) = 2e-19
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -2

Query: 628 LAGGVLILRNKFFIILYRGKDFLPGKVA 545
           L GGVL+LRNKFFIILYRGKDFLP +VA
Sbjct: 489 LTGGVLLLRNKFFIILYRGKDFLPCRVA 516


>ref|XP_010660413.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X2 [Vitis vinifera]
          Length = 789

 Score = 71.2 bits (173), Expect(2) = 2e-19
 Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
 Frame = -3

Query: 444 DESVCSTSNIGTFSEFKDIQANYMPLNNGTSTEKITIEAEKVKLAKELN--DXXXXXXXX 271
           D+ + +TS  GT SEF++I+  +  L +G +  ++ +EAEK +L KEL   +        
Sbjct: 548 DKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILKR 607

Query: 270 XXXXXXXXXXXLNSSWHPSEQSADRELLTG*ERQAFQKIDMKMDEFLLRG 121
                      LNS+W P++  AD+E++T  ER+ F+KI  KMD  LL G
Sbjct: 608 KIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLG 657



 Score = 52.0 bits (123), Expect(2) = 2e-19
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -2

Query: 628 LAGGVLILRNKFFIILYRGKDFLPGKVA 545
           L GGVL+LRNKFFIILYRGKDFLP +VA
Sbjct: 489 LTGGVLLLRNKFFIILYRGKDFLPCRVA 516


>ref|XP_002444215.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
           gi|241940565|gb|EES13710.1| hypothetical protein
           SORBIDRAFT_07g015120 [Sorghum bicolor]
          Length = 728

 Score = 73.6 bits (179), Expect(2) = 2e-19
 Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
 Frame = -3

Query: 546 QEVHERELKFRDQQLXXXXXXXXXXXXXKSLNAIDE-SVCSTSNIGTFSEFKDIQANYMP 370
           Q V +RE +  D+Q+              SL  + E S    S++GTF E+KD  A+++ 
Sbjct: 458 QTVIQREAQVDDEQVKEEEARLKAVD---SLQMVGELSSDEESSVGTFREYKDFHADFVH 514

Query: 369 LNNGTSTEKITIEAEKVKLAKELNDXXXXXXXXXXXXXXXXXXXLN--SSWHPSEQSADR 196
            N   S   I +EAEK +L KEL D                       SSW PSEQSADR
Sbjct: 515 ANTEKSNTMIELEAEKYRLEKELKDHEWKLSILNKKIERSNQALAKLRSSWSPSEQSADR 574

Query: 195 ELLTG*ERQAFQKIDMKMDEFLLRG 121
           ELLT  E+  F++I  KMD  +L G
Sbjct: 575 ELLTEEEKIMFRRIGRKMDGLVLLG 599



 Score = 49.7 bits (117), Expect(2) = 2e-19
 Identities = 22/32 (68%), Positives = 27/32 (84%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVAR 542
           ++ L GG +ILRNK F+ILYRGKDFLPG VA+
Sbjct: 427 LKHLTGGTVILRNKDFVILYRGKDFLPGGVAQ 458


>emb|CBI33632.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score = 71.2 bits (173), Expect(2) = 2e-19
 Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
 Frame = -3

Query: 444 DESVCSTSNIGTFSEFKDIQANYMPLNNGTSTEKITIEAEKVKLAKELN--DXXXXXXXX 271
           D+ + +TS  GT SEF++I+  +  L +G +  ++ +EAEK +L KEL   +        
Sbjct: 249 DKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILKR 308

Query: 270 XXXXXXXXXXXLNSSWHPSEQSADRELLTG*ERQAFQKIDMKMDEFLLRG 121
                      LNS+W P++  AD+E++T  ER+ F+KI  KMD  LL G
Sbjct: 309 KIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLG 358



 Score = 52.0 bits (123), Expect(2) = 2e-19
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -2

Query: 628 LAGGVLILRNKFFIILYRGKDFLPGKVA 545
           L GGVL+LRNKFFIILYRGKDFLP +VA
Sbjct: 190 LTGGVLLLRNKFFIILYRGKDFLPCRVA 217


>gb|KNA06242.1| hypothetical protein SOVF_182920 [Spinacia oleracea]
          Length = 807

 Score = 63.2 bits (152), Expect(2) = 1e-18
 Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
 Frame = -3

Query: 444 DESVCSTSNIGTFSEFKDIQANYMPLNNGTSTEKITIEAEKVKLAKELN--DXXXXXXXX 271
           DE+    S +GTFSEF+ IQ     +++  +   + IEAEK +L KEL   +        
Sbjct: 571 DETSADRSIVGTFSEFQHIQTICRNVHHINNEAAVKIEAEKERLEKELRKQEHKLAILKL 630

Query: 270 XXXXXXXXXXXLNSSWHPSEQSADRELLTG*ERQAFQKIDMKMDEFLLRG 121
                      L+S+W  SEQ  D+EL+T  ER+ F+KI +KMD  L+ G
Sbjct: 631 KIVKAEKDLGKLDSAWMSSEQEPDQELITEEERECFRKIGLKMDNILVLG 680



 Score = 57.0 bits (136), Expect(2) = 1e-18
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -2

Query: 646 SS*MQRLAGGVLILRNKFFIILYRGKDFLPGKVA 545
           SS ++ L GGVL+LRNKFFI+LYRGKDFLPG VA
Sbjct: 506 SSELKHLTGGVLLLRNKFFIVLYRGKDFLPGNVA 539


>ref|XP_004973284.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Setaria italica]
           gi|944237202|gb|KQL01540.1| hypothetical protein
           SETIT_013311mg [Setaria italica]
          Length = 748

 Score = 69.7 bits (169), Expect(2) = 2e-18
 Identities = 51/144 (35%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
 Frame = -3

Query: 546 QEVHERELKFRDQQLXXXXXXXXXXXXXKSLNAIDESVCSTSNIGTFSEFKDIQANYMPL 367
           Q V +RE +  D+Q+              SL  +       S++GTF E++D QA+++  
Sbjct: 478 QTVIQREAQVHDEQVKEEEARLKAVD---SLQMVGGLSSEESSVGTFREYQDFQADHVHE 534

Query: 366 NNGTSTEKITIEAEKVKLAKELNDXXXXXXXXXXXXXXXXXXXL--NSSWHPSEQSADRE 193
           N   S   I +EAEK +L KEL D                      +SSW PSEQSADRE
Sbjct: 535 NTENSNI-IELEAEKHRLEKELKDQEWKLSILNKKIEGSNQALAKLHSSWSPSEQSADRE 593

Query: 192 LLTG*ERQAFQKIDMKMDEFLLRG 121
           LLT  E+  F++I  KMD  +L G
Sbjct: 594 LLTEEEKAMFRRIGRKMDGLVLLG 617



 Score = 50.1 bits (118), Expect(2) = 2e-18
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVAR 542
           ++ L GG +ILRNK FIILYRGKDFLPG VA+
Sbjct: 447 LKHLTGGTVILRNKDFIILYRGKDFLPGGVAQ 478


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
           gi|223544130|gb|EEF45655.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 742

 Score = 68.6 bits (166), Expect(2) = 2e-18
 Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
 Frame = -3

Query: 444 DESVCSTSNIGTFSEFKDIQANYMPLNNGTSTEKITIEAEKVKLAKEL--NDXXXXXXXX 271
           DE V   + IGT +EF+DIQ  +  L  G    K+ +EAEK KL +EL   +        
Sbjct: 507 DELVVKATKIGTLNEFQDIQVRFKELAKGYRDSKLQLEAEKEKLERELRIQEHKLLILKS 566

Query: 270 XXXXXXXXXXXLNSSWHPSEQSADRELLTG*ERQAFQKIDMKMDEFLLRG 121
                      LNS+W P++Q AD E++T  ER+  +KI +KM   LL G
Sbjct: 567 KIEKSARELSKLNSAWAPADQDADLEMMTEEERECLRKIGLKMRSSLLLG 616



 Score = 51.2 bits (121), Expect(2) = 2e-18
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVA 545
           ++ L GGVL+LRNKFFIIL+RGKDFLP +VA
Sbjct: 445 LKHLTGGVLLLRNKFFIILFRGKDFLPCQVA 475


>ref|XP_006660084.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Oryza brachyantha]
          Length = 621

 Score = 68.6 bits (166), Expect(2) = 2e-18
 Identities = 49/144 (34%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
 Frame = -3

Query: 546 QEVHERELKFRDQQLXXXXXXXXXXXXXKSLNAIDESVCSTSNIGTFSEFKDIQANYMPL 367
           + V ERE +  DQQ              + L A+       S++GTF E++D Q N+   
Sbjct: 339 ESVIERESQVHDQQAKEEEARLKVVDSLQMLAAVSPE---KSSVGTFREYQDFQDNHECG 395

Query: 366 NNGTSTEKITIEAEKVKLAKELNDXXXXXXXXXXXXXXXXXXXL--NSSWHPSEQSADRE 193
               +  +I +EA+K  L KEL D                      +SSW PSEQ  DRE
Sbjct: 396 TTENNNVRIQLEAKKHLLEKELKDHEWRLSTLTKKIERSNQVLAKLHSSWSPSEQDGDRE 455

Query: 192 LLTG*ERQAFQKIDMKMDEFLLRG 121
           LLT  ER   +KI +KMDE +L G
Sbjct: 456 LLTEEERMILRKIGLKMDEHVLLG 479



 Score = 51.2 bits (121), Expect(2) = 2e-18
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVA 545
           ++RL GG +ILRNK FII+YRGKDFLPG VA
Sbjct: 308 LKRLTGGTVILRNKDFIIIYRGKDFLPGDVA 338


>ref|XP_007139175.1| hypothetical protein PHAVU_008G007700g [Phaseolus vulgaris]
           gi|561012308|gb|ESW11169.1| hypothetical protein
           PHAVU_008G007700g [Phaseolus vulgaris]
          Length = 744

 Score = 68.6 bits (166), Expect(2) = 5e-18
 Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
 Frame = -3

Query: 459 SLNAIDESVCSTSNIGTFSEFKDIQANYMPLNNGTSTEKITIEAEKVKLAKELNDXXXXX 280
           +L+ IDE    TS  GT +EFK+IQ  +     G     + +EAE  +L KEL +     
Sbjct: 497 ALSPIDEVPQDTSTSGTLTEFKEIQTKFEDAKKGDIELNLQLEAEICRLEKELKEEQHRA 556

Query: 279 XXXXXXXXXXXXXXL--NSSWHPSEQSADRELLTG*ERQAFQKIDMKMDEFLLRG 121
                            N++W PSEQ  D E++T  ER+ F+KI +KM  FLL G
Sbjct: 557 LILNKKMEKSGKELSKLNAAWTPSEQDTDLEMMTDEERECFRKIGLKMQSFLLLG 611



 Score = 49.7 bits (117), Expect(2) = 5e-18
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVA 545
           ++ L GGVL+LRNKF+IILYRG DFLP +VA
Sbjct: 440 LKYLTGGVLLLRNKFYIILYRGNDFLPKRVA 470


>ref|XP_008648226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X1 [Zea mays]
          Length = 757

 Score = 67.4 bits (163), Expect(2) = 9e-18
 Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
 Frame = -3

Query: 546 QEVHERELKFRDQQLXXXXXXXXXXXXXKSLNAIDESVCSTSNIGTFSEFKDIQANYMPL 367
           Q V +RE +  D+Q+             + +  + E     S++GTF E++   A ++  
Sbjct: 476 QTVIQREAQVHDEQVKEEEARLKAVDSLQMVGELSEE----SSLGTFREYQGFHAKFVHE 531

Query: 366 NNGTSTEKITIEAEKVKLAKELNDXXXXXXXXXXXXXXXXXXXL--NSSWHPSEQSADRE 193
           N   S   I +EAEK +L KEL D                      +SSW PSEQSADRE
Sbjct: 532 NTENSNTMIELEAEKYRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADRE 591

Query: 192 LLTG*ERQAFQKIDMKMDEFLLRG 121
            LT  E+  F++I  KMD  +L G
Sbjct: 592 HLTEEEKIMFRRIGRKMDGLVLLG 615



 Score = 50.1 bits (118), Expect(2) = 9e-18
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVAR 542
           ++ L GG +ILRNK FIILYRGKDFLPG VA+
Sbjct: 445 LKHLTGGTVILRNKDFIILYRGKDFLPGGVAQ 476


>ref|XP_008648227.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X2 [Zea mays]
          Length = 744

 Score = 67.4 bits (163), Expect(2) = 9e-18
 Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
 Frame = -3

Query: 546 QEVHERELKFRDQQLXXXXXXXXXXXXXKSLNAIDESVCSTSNIGTFSEFKDIQANYMPL 367
           Q V +RE +  D+Q+             + +  + E     S++GTF E++   A ++  
Sbjct: 476 QTVIQREAQVHDEQVKEEEARLKAVDSLQMVGELSEE----SSLGTFREYQGFHAKFVHE 531

Query: 366 NNGTSTEKITIEAEKVKLAKELNDXXXXXXXXXXXXXXXXXXXL--NSSWHPSEQSADRE 193
           N   S   I +EAEK +L KEL D                      +SSW PSEQSADRE
Sbjct: 532 NTENSNTMIELEAEKYRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADRE 591

Query: 192 LLTG*ERQAFQKIDMKMDEFLLRG 121
            LT  E+  F++I  KMD  +L G
Sbjct: 592 HLTEEEKIMFRRIGRKMDGLVLLG 615



 Score = 50.1 bits (118), Expect(2) = 9e-18
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVAR 542
           ++ L GG +ILRNK FIILYRGKDFLPG VA+
Sbjct: 445 LKHLTGGTVILRNKDFIILYRGKDFLPGGVAQ 476


>ref|XP_008648229.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X3 [Zea mays]
          Length = 728

 Score = 67.4 bits (163), Expect(2) = 9e-18
 Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
 Frame = -3

Query: 546 QEVHERELKFRDQQLXXXXXXXXXXXXXKSLNAIDESVCSTSNIGTFSEFKDIQANYMPL 367
           Q V +RE +  D+Q+             + +  + E     S++GTF E++   A ++  
Sbjct: 447 QTVIQREAQVHDEQVKEEEARLKAVDSLQMVGELSEE----SSLGTFREYQGFHAKFVHE 502

Query: 366 NNGTSTEKITIEAEKVKLAKELNDXXXXXXXXXXXXXXXXXXXL--NSSWHPSEQSADRE 193
           N   S   I +EAEK +L KEL D                      +SSW PSEQSADRE
Sbjct: 503 NTENSNTMIELEAEKYRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADRE 562

Query: 192 LLTG*ERQAFQKIDMKMDEFLLRG 121
            LT  E+  F++I  KMD  +L G
Sbjct: 563 HLTEEEKIMFRRIGRKMDGLVLLG 586



 Score = 50.1 bits (118), Expect(2) = 9e-18
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVAR 542
           ++ L GG +ILRNK FIILYRGKDFLPG VA+
Sbjct: 416 LKHLTGGTVILRNKDFIILYRGKDFLPGGVAQ 447


>tpg|DAA49209.1| TPA: chloroplast RNA splicing1 [Zea mays]
          Length = 715

 Score = 67.4 bits (163), Expect(2) = 9e-18
 Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
 Frame = -3

Query: 546 QEVHERELKFRDQQLXXXXXXXXXXXXXKSLNAIDESVCSTSNIGTFSEFKDIQANYMPL 367
           Q V +RE +  D+Q+             + +  + E     S++GTF E++   A ++  
Sbjct: 447 QTVIQREAQVHDEQVKEEEARLKAVDSLQMVGELSEE----SSLGTFREYQGFHAKFVHE 502

Query: 366 NNGTSTEKITIEAEKVKLAKELNDXXXXXXXXXXXXXXXXXXXL--NSSWHPSEQSADRE 193
           N   S   I +EAEK +L KEL D                      +SSW PSEQSADRE
Sbjct: 503 NTENSNTMIELEAEKYRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADRE 562

Query: 192 LLTG*ERQAFQKIDMKMDEFLLRG 121
            LT  E+  F++I  KMD  +L G
Sbjct: 563 HLTEEEKIMFRRIGRKMDGLVLLG 586



 Score = 50.1 bits (118), Expect(2) = 9e-18
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVAR 542
           ++ L GG +ILRNK FIILYRGKDFLPG VA+
Sbjct: 416 LKHLTGGTVILRNKDFIILYRGKDFLPGGVAQ 447


>ref|NP_001105008.1| chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic precursor [Zea mays]
           gi|75173308|sp|Q9FYT6.1|CRS1_MAIZE RecName:
           Full=Chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
           splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
           SPLICING 1; Flags: Precursor
           gi|9837550|gb|AAG00595.1|AF290414_1 CRS1 [Zea mays]
          Length = 715

 Score = 67.4 bits (163), Expect(2) = 9e-18
 Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
 Frame = -3

Query: 546 QEVHERELKFRDQQLXXXXXXXXXXXXXKSLNAIDESVCSTSNIGTFSEFKDIQANYMPL 367
           Q V +RE +  D+Q+             + +  + E     S++GTF E++   A ++  
Sbjct: 447 QTVIQREAQVHDEQVKEEEARLKAVDSLQMVGELSEE----SSLGTFREYQGFHAKFVHE 502

Query: 366 NNGTSTEKITIEAEKVKLAKELNDXXXXXXXXXXXXXXXXXXXL--NSSWHPSEQSADRE 193
           N   S   I +EAEK +L KEL D                      +SSW PSEQSADRE
Sbjct: 503 NTENSNTMIELEAEKYRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADRE 562

Query: 192 LLTG*ERQAFQKIDMKMDEFLLRG 121
            LT  E+  F++I  KMD  +L G
Sbjct: 563 HLTEEEKIMFRRIGRKMDGLVLLG 586



 Score = 50.1 bits (118), Expect(2) = 9e-18
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -2

Query: 637 MQRLAGGVLILRNKFFIILYRGKDFLPGKVAR 542
           ++ L GG +ILRNK FIILYRGKDFLPG VA+
Sbjct: 416 LKHLTGGTVILRNKDFIILYRGKDFLPGGVAQ 447