BLASTX nr result
ID: Mentha29_contig00046174
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00046174
(390 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 179 3e-43
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera] 179 3e-43
emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera] 179 5e-43
ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, part... 171 1e-40
ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, part... 171 1e-40
ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203... 171 1e-40
ref|XP_007221295.1| hypothetical protein PRUPE_ppa024499mg, part... 169 3e-40
ref|XP_007023626.1| Uncharacterized protein TCM_046829 [Theobrom... 168 8e-40
ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, par... 168 8e-40
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun... 167 1e-39
emb|CAN74420.1| hypothetical protein VITISV_024222 [Vitis vinifera] 167 1e-39
ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [The... 166 3e-39
emb|CAN72140.1| hypothetical protein VITISV_017107 [Vitis vinifera] 166 4e-39
ref|XP_007019612.1| Uncharacterized protein TCM_035725 [Theobrom... 165 7e-39
ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobrom... 164 9e-39
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 164 9e-39
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 164 1e-38
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 164 1e-38
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 164 1e-38
emb|CAN68706.1| hypothetical protein VITISV_001642 [Vitis vinifera] 164 2e-38
>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
Length = 1521
Score = 179 bits (455), Expect = 3e-43
Identities = 85/127 (66%), Positives = 103/127 (81%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH GRD++I L+ RF+WPS K++ + + +CR CQV KG+ N G Y PLP+PS PW
Sbjct: 1113 GHFGRDKTIALVEDRFFWPSLKKDVWKVIKQCRACQVGKGSKQNTGLYTPLPVPSKPWED 1172
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLPRTQRG DSIFVVVDRFSKMAHFI CK+++DAS+VA+LFF+E+ RLHGLP
Sbjct: 1173 LSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIPCKKASDASYVAALFFKEVVRLHGLPQ 1232
Query: 28 SIVSVRD 8
SIVS RD
Sbjct: 1233 SIVSDRD 1239
>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
Length = 1392
Score = 179 bits (455), Expect = 3e-43
Identities = 85/127 (66%), Positives = 103/127 (81%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH GRD++I L+ RF+WPS K++ + + +CR CQV KG+ N G Y PLP+PS PW
Sbjct: 984 GHFGRDKTIALVEDRFFWPSLKKDVWKVIKQCRACQVGKGSKQNTGLYTPLPVPSKPWED 1043
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLPRTQRG DSIFVVVDRFSKMAHFI CK+++DAS+VA+LFF+E+ RLHGLP
Sbjct: 1044 LSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIPCKKASDASYVAALFFKEVVRLHGLPQ 1103
Query: 28 SIVSVRD 8
SIVS RD
Sbjct: 1104 SIVSDRD 1110
>emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera]
Length = 1292
Score = 179 bits (453), Expect = 5e-43
Identities = 85/127 (66%), Positives = 102/127 (80%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH GRD++I L+ RF+WPS K++ + + CR CQV KG+ N G Y PLP+PS PW
Sbjct: 944 GHFGRDKTIALVEDRFFWPSLKKDVWKVIKXCRACQVGKGSKQNTGLYTPLPVPSKPWED 1003
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLPRTQRG DSIFVVVDRFSKMAHFI CK+++DAS+VA+LFF+E+ RLHGLP
Sbjct: 1004 LSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIPCKKASDASYVAALFFKEVVRLHGLPQ 1063
Query: 28 SIVSVRD 8
SIVS RD
Sbjct: 1064 SIVSDRD 1070
>ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, partial [Prunus persica]
gi|462418685|gb|EMJ22948.1| hypothetical protein
PRUPE_ppb022800mg, partial [Prunus persica]
Length = 722
Score = 171 bits (432), Expect = 1e-40
Identities = 79/129 (61%), Positives = 99/129 (76%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH G+D++I L+ RFYWPS +++A +A+CR CQ++K N G Y PLPIP PW
Sbjct: 284 GHFGKDKTITLVADRFYWPSLKRDVAHILAQCRTCQLAKARKQNTGLYTPLPIPHTPWKD 343
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLP+T RG+DSI VVVDRFSKMAHF+ C ++ADAS+VA LFF+E+ LHGLP
Sbjct: 344 LSMDFVLGLPKTARGHDSILVVVDRFSKMAHFLPCSKAADASYVAKLFFKEVIHLHGLPV 403
Query: 28 SIVSVRDTR 2
SIVS RD +
Sbjct: 404 SIVSDRDVK 412
>ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, partial [Prunus persica]
gi|462403623|gb|EMJ09180.1| hypothetical protein
PRUPE_ppa015715mg, partial [Prunus persica]
Length = 1445
Score = 171 bits (432), Expect = 1e-40
Identities = 78/129 (60%), Positives = 99/129 (76%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH G+D++I L+ RFYWPS +++A +++CR CQ++K N G Y PLPIP PW
Sbjct: 1000 GHFGKDKTIALVEDRFYWPSLKRDVAHLISQCRTCQLAKARKRNTGLYTPLPIPHTPWKD 1059
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLP+T RG DSIFV+VDRFSKMAHF+ C ++ DAS+VA LFF+E+ RLHGLP
Sbjct: 1060 LSMDFVLGLPKTSRGYDSIFVIVDRFSKMAHFLPCAKNTDASYVAKLFFKEVVRLHGLPV 1119
Query: 28 SIVSVRDTR 2
SIVS RD +
Sbjct: 1120 SIVSDRDVK 1128
>ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203557 [Cucumis sativus]
Length = 1406
Score = 171 bits (432), Expect = 1e-40
Identities = 77/129 (59%), Positives = 101/129 (78%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH GRD+++ + +F+WP ++++ ++ RC ICQ +KG + N G Y PLPIPS W
Sbjct: 1131 GHFGRDKTLVAISSKFFWPQLNRDVTNFIKRCSICQTAKGNSQNTGLYTPLPIPSTIWED 1190
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLPRTQRG+DS+FVVVDRFSKMAHFI CK++ DA ++A+LFFREI RLHG+P
Sbjct: 1191 LSMDFVLGLPRTQRGHDSVFVVVDRFSKMAHFIPCKKTFDALNIANLFFREIVRLHGIPK 1250
Query: 28 SIVSVRDTR 2
+IVS RD +
Sbjct: 1251 TIVSDRDVK 1259
>ref|XP_007221295.1| hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
gi|462417929|gb|EMJ22494.1| hypothetical protein
PRUPE_ppa024499mg, partial [Prunus persica]
Length = 1364
Score = 169 bits (429), Expect = 3e-40
Identities = 79/129 (61%), Positives = 99/129 (76%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH G+D++I L+ RFYWPS +++A +A+C CQ++K N G Y PLPIP PW
Sbjct: 1011 GHFGKDKTITLVADRFYWPSLKRDVAHILAQCCTCQLAKARKQNTGLYTPLPIPHTPWKD 1070
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLP+T RG+DSI VVVDRFSKMAHF+ C ++ADAS+VA LFF+E+ RLHGLP
Sbjct: 1071 LSMDFVLGLPKTARGHDSILVVVDRFSKMAHFLPCSKAADASYVAKLFFKEVIRLHGLPV 1130
Query: 28 SIVSVRDTR 2
SIVS RD +
Sbjct: 1131 SIVSDRDVK 1139
>ref|XP_007023626.1| Uncharacterized protein TCM_046829 [Theobroma cacao]
gi|508778992|gb|EOY26248.1| Uncharacterized protein
TCM_046829 [Theobroma cacao]
Length = 672
Score = 168 bits (425), Expect = 8e-40
Identities = 78/129 (60%), Positives = 97/129 (75%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH GRD+++ ++ R+YWP +++ R V RC C KG+A N G Y PLP P PW+
Sbjct: 302 GHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIH 361
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLP+T +G DSIFVVVDRFSKMAHFI C R++DA+H+A LFFREI RLHG+P
Sbjct: 362 LSMDFVLGLPKTAKGFDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFREIVRLHGIPT 421
Query: 28 SIVSVRDTR 2
SIVS RD +
Sbjct: 422 SIVSDRDVK 430
>ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
gi|508702149|gb|EOX94045.1| DNA/RNA polymerases
superfamily protein, partial [Theobroma cacao]
Length = 624
Score = 168 bits (425), Expect = 8e-40
Identities = 78/129 (60%), Positives = 97/129 (75%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH GRD+++ ++ R+YWP +++ R V RC C KG+A N G Y PLP P PW+
Sbjct: 483 GHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIH 542
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLP+T +G DSIFVVVDRFSKMAHFI C R++DA+H+A LFFREI RLHG+P
Sbjct: 543 LSMDFVLGLPKTAKGFDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFREIVRLHGIPT 602
Query: 28 SIVSVRDTR 2
SIVS RD +
Sbjct: 603 SIVSDRDVK 611
>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
gi|462405925|gb|EMJ11389.1| hypothetical protein
PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 167 bits (424), Expect = 1e-39
Identities = 78/129 (60%), Positives = 97/129 (75%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH GRD++I + RFYWP +++ V +C CQ SKG N G Y PLP+P+ W
Sbjct: 1114 GHLGRDKTIAGMEERFYWPQLKRDVGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQD 1173
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
L+MDFVLGLPRTQRG DS+FVVVDRFSKMAHFI C+++ADAS++A LFFRE+ RLHG+P
Sbjct: 1174 LAMDFVLGLPRTQRGVDSVFVVVDRFSKMAHFIACRKTADASNIAKLFFREVVRLHGVPT 1233
Query: 28 SIVSVRDTR 2
SI S RDT+
Sbjct: 1234 SITSDRDTK 1242
>emb|CAN74420.1| hypothetical protein VITISV_024222 [Vitis vinifera]
Length = 549
Score = 167 bits (423), Expect = 1e-39
Identities = 81/129 (62%), Positives = 100/129 (77%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH GRD++I L+ RF+WPS K++ + + +CR CQV KG+ N G Y PLPIPS PW
Sbjct: 331 GHFGRDKTIALVEYRFFWPSLKKDVWKVIKQCRACQVGKGSKQNTGLYTPLPIPSKPWED 390
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLP TQ G +SIFVVVDRFSKM HFI K+++DAS+VA+LFF+E+ RLHGLP
Sbjct: 391 LSMDFVLGLPMTQWGFNSIFVVVDRFSKMTHFIPRKKASDASYVAALFFKEVVRLHGLPQ 450
Query: 28 SIVSVRDTR 2
SIVS RD +
Sbjct: 451 SIVSDRDVK 459
>ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508709261|gb|EOY01158.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 786
Score = 166 bits (420), Expect = 3e-39
Identities = 77/129 (59%), Positives = 97/129 (75%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH GRD+++ ++ R+YWP +++ R V RC C KG+A N G Y PLP P PW+
Sbjct: 483 GHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIH 542
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLP+T +G DSIFVVVDRFSKMAHFI C R+++A+H+A LFFREI RLHG+P
Sbjct: 543 LSMDFVLGLPKTAKGFDSIFVVVDRFSKMAHFIPCFRTSNATHIAELFFREIVRLHGIPT 602
Query: 28 SIVSVRDTR 2
SIVS RD +
Sbjct: 603 SIVSDRDVK 611
>emb|CAN72140.1| hypothetical protein VITISV_017107 [Vitis vinifera]
Length = 485
Score = 166 bits (419), Expect = 4e-39
Identities = 79/125 (63%), Positives = 97/125 (77%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH G+D++I L+ F+WPS K++ + + +CR CQV KG+ N G Y PLPIPS W
Sbjct: 356 GHFGQDKTIALVEDHFFWPSLKKDVWKVIKQCRACQVGKGSKRNTGLYTPLPIPSKAWED 415
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLPRTQRG DSIFVVVDRFSKM HFI CK+++DAS+VA+LFF E+ RLHGLP
Sbjct: 416 LSMDFVLGLPRTQRGFDSIFVVVDRFSKMTHFIPCKKTSDASYVAALFFIEVVRLHGLPQ 475
Query: 28 SIVSV 14
SIV +
Sbjct: 476 SIVFI 480
>ref|XP_007019612.1| Uncharacterized protein TCM_035725 [Theobroma cacao]
gi|508724940|gb|EOY16837.1| Uncharacterized protein
TCM_035725 [Theobroma cacao]
Length = 499
Score = 165 bits (417), Expect = 7e-39
Identities = 77/129 (59%), Positives = 96/129 (74%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH GRD+++ ++ R+YWP +++ R V RC C KG+A N G Y PLP P PW+
Sbjct: 78 GHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIH 137
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVL LP+T +G DSIFVVVDRFSKMAHFI C R++DA+H+A LFFREI RLHG+P
Sbjct: 138 LSMDFVLELPKTAKGFDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFREIVRLHGIPT 197
Query: 28 SIVSVRDTR 2
SIVS RD +
Sbjct: 198 SIVSDRDVK 206
>ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobroma cacao]
gi|508727408|gb|EOY19305.1| Uncharacterized protein
TCM_044370 [Theobroma cacao]
Length = 1306
Score = 164 bits (416), Expect = 9e-39
Identities = 76/129 (58%), Positives = 96/129 (74%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH GRD+++ ++ R+YWP +++ R V RC C KG+A N G Y PLP P PW+
Sbjct: 927 GHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPTCLFGKGSAQNTGLYVPLPEPDAPWIH 986
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLP+T +G DSIFVVVDRFSKMAHFI C R++DA+H+A LFF E+ RLHG+P
Sbjct: 987 LSMDFVLGLPKTAKGFDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFCEVVRLHGIPT 1046
Query: 28 SIVSVRDTR 2
SIVS RD +
Sbjct: 1047 SIVSDRDVK 1055
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 164 bits (416), Expect = 9e-39
Identities = 76/129 (58%), Positives = 97/129 (75%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH G ++ ++L F+WP +++ R+VARC CQ +K G Y PLP+P++PW
Sbjct: 1207 GHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWED 1266
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
+SMDFVLGLPRT+RG DSIFVVVDRFSKMAHFI C ++ DASH+A LFFREI RLHG+P
Sbjct: 1267 ISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVRLHGVPN 1326
Query: 28 SIVSVRDTR 2
+IVS RDT+
Sbjct: 1327 TIVSDRDTK 1335
Score = 101 bits (251), Expect = 1e-19
Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Frame = -3
Query: 385 HGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATN-AG*YRPLPIPSLPWVG 209
H G + L +++W S +E+A +VA C +CQ K AG +PL +P W
Sbjct: 2029 HPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDE 2088
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
+ MDF+ GLP+TQ G DSI+VVVDR +K+A FI K + + +A L+F I LHG+P
Sbjct: 2089 IGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGVPK 2148
Query: 28 SIVSVRDTR 2
IVS R+++
Sbjct: 2149 KIVSDRESQ 2157
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 164 bits (415), Expect = 1e-38
Identities = 77/129 (59%), Positives = 96/129 (74%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH G + ++L F+WP +++ R+VARC CQ +K G Y PLP+PS+PW
Sbjct: 1235 GHFGVKKMEDILADHFFWPKKRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWED 1294
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
+SMDFVLGLPRT++G DSIFVVVDRFSKMAHFI C +S DA+HVA LFFREI RLHG+P
Sbjct: 1295 ISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPN 1354
Query: 28 SIVSVRDTR 2
+IVS RDT+
Sbjct: 1355 TIVSDRDTK 1363
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 164 bits (415), Expect = 1e-38
Identities = 77/129 (59%), Positives = 97/129 (75%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH G ++ ++L F+WP +++ R+VARC CQ +K G Y PLP+PS+PW
Sbjct: 548 GHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWED 607
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
+SMDFVLGLPRT++G DSIFVVVDRFSKMAHFI C +S DA+HVA LFFREI RLHG+P
Sbjct: 608 ISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPN 667
Query: 28 SIVSVRDTR 2
+IVS RDT+
Sbjct: 668 TIVSDRDTK 676
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 164 bits (415), Expect = 1e-38
Identities = 77/129 (59%), Positives = 97/129 (75%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH G ++ ++L F+WP +++ R+VARC CQ +K G Y PLP+PS+PW
Sbjct: 1235 GHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWED 1294
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
+SMDFVLGLPRT++G DSIFVVVDRFSKMAHFI C +S DA+HVA LFFREI RLHG+P
Sbjct: 1295 ISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPN 1354
Query: 28 SIVSVRDTR 2
+IVS RDT+
Sbjct: 1355 TIVSDRDTK 1363
>emb|CAN68706.1| hypothetical protein VITISV_001642 [Vitis vinifera]
Length = 1082
Score = 164 bits (414), Expect = 2e-38
Identities = 78/129 (60%), Positives = 98/129 (75%)
Frame = -3
Query: 388 GHGGRDRSIELLLRRFYWPSDSKEMARYVARCRICQVSKGTATNAG*YRPLPIPSLPWVG 209
GH GRD++I L+ F+WPS K++ + + +CR CQV KG+ N G Y LPIPS PW
Sbjct: 794 GHFGRDKTIALVGDHFFWPSLKKDVWKVIKQCRACQVGKGSKQNIGLYTSLPIPSKPWED 853
Query: 208 LSMDFVLGLPRTQRGNDSIFVVVDRFSKMAHFILCKRSADASHVASLFFREIYRLHGLPA 29
LSMDFVLGLPRTQ+G SIFVVVDRFSKM HFI CK++ + S+V++LFF+E+ RLHGLP
Sbjct: 854 LSMDFVLGLPRTQQGFHSIFVVVDRFSKMTHFIPCKKALNVSYVSTLFFKEVVRLHGLPQ 913
Query: 28 SIVSVRDTR 2
SIVS RD +
Sbjct: 914 SIVSDRDVK 922