BLASTX nr result
ID: Mentha29_contig00044435
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha29_contig00044435 (237 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEE01491.1| coat protein [Blueberry red ringspot virus] 52 4e-06 ref|NP_395468.1| putative coat protein [Blueberry red ringspot v... 52 4e-06 ref|YP_006607891.1| capsid protein [Soybean Putnam virus] gi|401... 55 8e-06 >gb|AEE01491.1| coat protein [Blueberry red ringspot virus] Length = 491 Score = 52.4 bits (124), Expect(2) = 4e-06 Identities = 18/26 (69%), Positives = 22/26 (84%) Frame = -2 Query: 98 KKDCKCWLCEEIGHYANNCPNKKGKK 21 KKDCKCW+C+E GHYAN CPNK ++ Sbjct: 403 KKDCKCWICQEDGHYANECPNKDKRR 428 Score = 23.9 bits (50), Expect(2) = 4e-06 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -1 Query: 129 RKNDKYCPKDKK 94 + N KYCPK KK Sbjct: 393 KSNQKYCPKGKK 404 >ref|NP_395468.1| putative coat protein [Blueberry red ringspot virus] gi|16033535|gb|AAL13273.1|AF404509_3 putative coat protein [Blueberry red ringspot virus] Length = 486 Score = 52.4 bits (124), Expect(2) = 4e-06 Identities = 18/26 (69%), Positives = 22/26 (84%) Frame = -2 Query: 98 KKDCKCWLCEEIGHYANNCPNKKGKK 21 KKDCKCW+C+E GHYAN CPNK ++ Sbjct: 398 KKDCKCWICQEDGHYANECPNKDKRR 423 Score = 23.9 bits (50), Expect(2) = 4e-06 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -1 Query: 129 RKNDKYCPKDKK 94 + N KYCPK KK Sbjct: 388 KSNQKYCPKGKK 399 >ref|YP_006607891.1| capsid protein [Soybean Putnam virus] gi|401620159|gb|AFP95349.1| capsid protein [Soybean Putnam virus] Length = 498 Score = 55.5 bits (132), Expect = 8e-06 Identities = 19/29 (65%), Positives = 24/29 (82%) Frame = -2 Query: 98 KKDCKCWLCEEIGHYANNCPNKKGKKKEF 12 KK+C+CW+C E GHYAN CPNK+ KK+F Sbjct: 419 KKNCRCWICSEEGHYANECPNKENNKKQF 447