BLASTX nr result

ID: Mentha29_contig00044333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00044333
         (493 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068729.1| putative reverse transcriptase [Soybean chlorot...    59   9e-07

>ref|NP_068729.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
           gi|18266821|sp|P15629.2|POL_SOCMV RecName:
           Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|11322953|emb|CAC16945.1| putative
           reverse transcriptase [Soybean chlorotic mottle virus]
          Length = 692

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/38 (65%), Positives = 28/38 (73%)
 Frame = -1

Query: 472 GRLIRWYQRFNLFNPIIRLEKSENNPFADTLTREWREP 359
           GRLIRW  R   + P + L KSENNPFADTLTREW +P
Sbjct: 652 GRLIRWQLRLQAYQPYVELIKSENNPFADTLTREWSKP 689


Top