BLASTX nr result
ID: Mentha29_contig00044219
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00044219
(233 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN64170.1| hypothetical protein VITISV_029600 [Vitis vinifera] 107 2e-21
emb|CAN69946.1| hypothetical protein VITISV_038101 [Vitis vinifera] 103 3e-20
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] 102 4e-20
emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera] 101 1e-19
emb|CAN83704.1| hypothetical protein VITISV_004174 [Vitis vinifera] 97 3e-18
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 96 5e-18
ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846... 96 7e-18
gb|AAB82754.1| retrofit [Oryza longistaminata] 95 9e-18
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 95 1e-17
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 94 2e-17
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 94 3e-17
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 93 3e-17
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 93 3e-17
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 93 3e-17
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 93 3e-17
gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subc... 93 3e-17
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 93 3e-17
emb|CAR66103.1| RT-RNaseH [Triticum turgidum subsp. durum] 92 6e-17
ref|XP_003560741.1| PREDICTED: uncharacterized protein LOC100824... 92 8e-17
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 92 1e-16
>emb|CAN64170.1| hypothetical protein VITISV_029600 [Vitis vinifera]
Length = 328
Score = 107 bits (267), Expect = 2e-21
Identities = 49/77 (63%), Positives = 64/77 (83%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
L+S+F+ELGI L + +WCDN GA AL+ANPVFH+RTKHIEVDVHYV+E+ L K + V
Sbjct: 194 LRSIFSELGISLVNTPVIWCDNQGAGALAANPVFHSRTKHIEVDVHYVQEQVLDKKLVVS 253
Query: 52 HVPGIDQVADIFTKPLA 2
+VP ++QVAD+FTKPL+
Sbjct: 254 YVPSVEQVADLFTKPLS 270
>emb|CAN69946.1| hypothetical protein VITISV_038101 [Vitis vinifera]
Length = 184
Score = 103 bits (257), Expect = 3e-20
Identities = 44/77 (57%), Positives = 62/77 (80%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
+ S+ ELG++LK +WCDN G V+L+ANPV+HARTKHIE+ VH++R+K L K++E+
Sbjct: 103 MYSLLRELGVELKFSSVIWCDNQGVVSLAANPVYHARTKHIEIGVHFMRDKVLQKILEIR 162
Query: 52 HVPGIDQVADIFTKPLA 2
VP I+QVAD+FTKPL+
Sbjct: 163 FVPSIEQVADVFTKPLS 179
>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
Length = 1002
Score = 102 bits (255), Expect = 4e-20
Identities = 48/77 (62%), Positives = 62/77 (80%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
L+S+F+ELGI L + +WCDN GA AL+ANPVFH+RTKHIEVDV YVRE+ L K + V
Sbjct: 906 LRSLFSELGISLVNTPVIWCDNQGAGALAANPVFHSRTKHIEVDVXYVREQVLDKKLVVS 965
Query: 52 HVPGIDQVADIFTKPLA 2
+VP ++Q AD+FTKPL+
Sbjct: 966 YVPSVEQXADLFTKPLS 982
>emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera]
Length = 735
Score = 101 bits (252), Expect = 1e-19
Identities = 47/77 (61%), Positives = 61/77 (79%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
L S+F+ELGI L + +WCDN G AL+ANPVFH+RTKHIEVDVHYVRE+ L + + V
Sbjct: 639 LCSLFSELGISLVNTLVIWCDNQGVGALAANPVFHSRTKHIEVDVHYVREQVLDQKLVVS 698
Query: 52 HVPGIDQVADIFTKPLA 2
+VP ++QV D+FTKPL+
Sbjct: 699 YVPSVEQVVDLFTKPLS 715
>emb|CAN83704.1| hypothetical protein VITISV_004174 [Vitis vinifera]
Length = 345
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
L+S+F+ELGI L + +WCDN G L+ANPVFH+R HIEVDVHYVRE+ L K + V
Sbjct: 213 LRSIFSELGISLVNTPVIWCDNQGVSVLAANPVFHSRMNHIEVDVHYVREQVLDKKLVVS 272
Query: 52 HVPGIDQVADIFTKPLA 2
+V ++QVA++FTKPL+
Sbjct: 273 YVHSVEQVANLFTKPLS 289
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/77 (57%), Positives = 58/77 (75%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
+Q + TE+ IK +LWCDN GA LSANP+FHARTKHIEVD H+VR++ K++++
Sbjct: 1221 VQILLTEISIKSPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDYHFVRDRVAKKLLDIE 1280
Query: 52 HVPGIDQVADIFTKPLA 2
+VP DQVAD FTKPL+
Sbjct: 1281 YVPTGDQVADGFTKPLS 1297
>ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846463 [Brachypodium
distachyon]
Length = 989
Score = 95.5 bits (236), Expect = 7e-18
Identities = 44/75 (58%), Positives = 53/75 (70%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
+QSV ELG+ P LWCDN GA LSANPVFHARTKHIE+D H+VREK ++V
Sbjct: 894 IQSVLKELGVYQSRPPVLWCDNIGATYLSANPVFHARTKHIEIDFHFVREKVALGALDVR 953
Query: 52 HVPGIDQVADIFTKP 8
+ DQ+AD+FTKP
Sbjct: 954 SISTADQLADVFTKP 968
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 95.1 bits (235), Expect = 9e-18
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
+Q++ ELGI+ ++WCDN GA LSANPVFHARTKHIEVD H+VRE+ K++E+
Sbjct: 1353 VQTLLKELGIESPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEID 1412
Query: 52 HVPGIDQVADIFTKPLA 2
VP DQVAD FTK L+
Sbjct: 1413 FVPSGDQVADGFTKALS 1429
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/77 (55%), Positives = 57/77 (74%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
L+S+ +EL + L P +WCDN V LSANPV HARTKHIE+D+++VREK + K VEV
Sbjct: 1351 LRSLLSELQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFVREKVIRKEVEVR 1410
Query: 52 HVPGIDQVADIFTKPLA 2
HVP DQ+AD+ TK ++
Sbjct: 1411 HVPSADQLADVLTKTVS 1427
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 94.4 bits (233), Expect = 2e-17
Identities = 45/77 (58%), Positives = 56/77 (72%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
+Q++ ELGI ++WCDN GA LSANPVFHARTKHIEVD H+VRE+ K++E+
Sbjct: 1344 VQTLLRELGIDSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEID 1403
Query: 52 HVPGIDQVADIFTKPLA 2
VP DQVAD FTK L+
Sbjct: 1404 FVPSGDQVADGFTKALS 1420
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 93.6 bits (231), Expect = 3e-17
Identities = 45/77 (58%), Positives = 56/77 (72%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
+Q++ EL IK ++WCDN GA LSANPVFHARTKHIEVD H+VRE+ K++E+
Sbjct: 1361 VQTLLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEID 1420
Query: 52 HVPGIDQVADIFTKPLA 2
V DQVAD FTKPL+
Sbjct: 1421 FVSTNDQVADGFTKPLS 1437
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 93.2 bits (230), Expect = 3e-17
Identities = 44/77 (57%), Positives = 56/77 (72%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
+Q+V ELGI+ ++WCDN GA LSANPVFHA+TKHI VD H+VRE+ K++E+
Sbjct: 1356 VQTVLKELGIESPKAAKIWCDNLGAKYLSANPVFHAKTKHIHVDYHFVRERVSQKLLEID 1415
Query: 52 HVPGIDQVADIFTKPLA 2
VP DQVAD FTK L+
Sbjct: 1416 FVPSGDQVADGFTKALS 1432
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 93.2 bits (230), Expect = 3e-17
Identities = 44/77 (57%), Positives = 56/77 (72%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
+Q+V ELGI+ ++WCDN GA LSANPVFHA+TKHI VD H+VRE+ K++E+
Sbjct: 1356 VQTVLKELGIESPKAAKIWCDNLGAKYLSANPVFHAKTKHIHVDYHFVRERVSQKLLEID 1415
Query: 52 HVPGIDQVADIFTKPLA 2
VP DQVAD FTK L+
Sbjct: 1416 FVPSGDQVADGFTKALS 1432
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/77 (55%), Positives = 57/77 (74%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
++ + TELGI + RLWCDN GA ++ANPVFHARTKHIEVD H+VRE+ K++++
Sbjct: 809 VRKLLTELGILHPNAARLWCDNLGATYMTANPVFHARTKHIEVDYHFVREQVAQKLLDIH 868
Query: 52 HVPGIDQVADIFTKPLA 2
V DQVAD FTKP++
Sbjct: 869 FVSSQDQVADGFTKPIS 885
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 93.2 bits (230), Expect = 3e-17
Identities = 42/77 (54%), Positives = 58/77 (75%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
LQS+ +EL K+ +WCDN V+LSANPV H+RTKH+E+D+++VREK + + + V
Sbjct: 1164 LQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMELDLYFVREKVMERKLVVN 1223
Query: 52 HVPGIDQVADIFTKPLA 2
HVP DQVAD+FTKPL+
Sbjct: 1224 HVPTEDQVADVFTKPLS 1240
>gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1180
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/77 (58%), Positives = 56/77 (72%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
+Q++ ELG+ RLWCDN GA LS+NPVFHARTKHIEVD H+VRE+ +++EV
Sbjct: 982 IQTLLAELGVSSPLMARLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERVQRRLLEVD 1041
Query: 52 HVPGIDQVADIFTKPLA 2
VP DQVAD FTK L+
Sbjct: 1042 FVPTGDQVADGFTKALS 1058
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
+Q++ EL ++ S +LWCDN GA LSANPVFHARTKHIEVD H+VRE+ K++E+
Sbjct: 1155 VQTLLAELQVESPSMAKLWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSRKLLEID 1214
Query: 52 HVPGIDQVADIFTKPLA 2
VP DQVAD FTK L+
Sbjct: 1215 FVPTGDQVADGFTKALS 1231
>emb|CAR66103.1| RT-RNaseH [Triticum turgidum subsp. durum]
Length = 420
Score = 92.4 bits (228), Expect = 6e-17
Identities = 47/87 (54%), Positives = 58/87 (66%), Gaps = 10/87 (11%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFH----------ARTKHIEVDVHYVRE 83
+Q++ ELGIK RLWCDN GA LSANPVFH ARTKHIEVD H+VRE
Sbjct: 318 IQTLLYELGIKAPQAARLWCDNIGATYLSANPVFHPCVMECKETGARTKHIEVDFHFVRE 377
Query: 82 KALAKVVEVGHVPGIDQVADIFTKPLA 2
+ K++E+ +P DQ+AD FTKPL+
Sbjct: 378 RVARKLLEIRFIPTGDQLADGFTKPLS 404
>ref|XP_003560741.1| PREDICTED: uncharacterized protein LOC100824035 [Brachypodium
distachyon]
Length = 270
Score = 92.0 bits (227), Expect = 8e-17
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = -2
Query: 214 ELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVGHVPGID 35
EL I P LWCDN GA LS+NPVFHARTKHIEVD H+VRE+ K++++ + D
Sbjct: 71 ELAISQDQPPVLWCDNIGATYLSSNPVFHARTKHIEVDYHFVRERVAQKLLQIKFISSKD 130
Query: 34 QVADIFTKPLA 2
Q+ADIFTKPL+
Sbjct: 131 QLADIFTKPLS 141
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 91.7 bits (226), Expect = 1e-16
Identities = 41/76 (53%), Positives = 56/76 (73%)
Frame = -2
Query: 232 LQSVFTELGIKLKSPHRLWCDNTGAVALSANPVFHARTKHIEVDVHYVREKALAKVVEVG 53
+Q++ ELG++ +LWCDN GA LSANP+FHARTKHIEVD H+VRE+ K++E+
Sbjct: 723 VQTLLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIA 782
Query: 52 HVPGIDQVADIFTKPL 5
++ DQVAD FTK +
Sbjct: 783 YISTKDQVADGFTKAI 798