BLASTX nr result
ID: Mentha29_contig00044217
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00044217
(477 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA73042.1| polyprotein [Ananas comosus] 176 3e-42
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo] 166 3e-39
gb|ABA95101.1| retrotransposon protein, putative, Ty3-gypsy subc... 160 1e-37
gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subc... 154 9e-36
ref|XP_007032152.1| Retrotransposon protein, putative [Theobroma... 154 2e-35
ref|XP_007036977.1| DNA/RNA polymerases superfamily protein [The... 153 2e-35
ref|XP_007014044.1| CCHC-type integrase [Theobroma cacao] gi|508... 152 4e-35
ref|XP_007022574.1| DNA/RNA polymerases superfamily protein [The... 152 4e-35
emb|CAE01541.2| OSJNBa0033G05.1 [Oryza sativa Japonica Group] gi... 152 5e-35
gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subc... 152 6e-35
ref|XP_007099730.1| DNA/RNA polymerases superfamily protein [The... 151 8e-35
ref|XP_007028176.1| DNA/RNA polymerases superfamily protein [The... 151 8e-35
ref|XP_007014630.1| CCHC-type integrase [Theobroma cacao] gi|508... 151 1e-34
ref|XP_007023829.1| DNA/RNA polymerases superfamily protein [The... 151 1e-34
ref|XP_007032220.1| Retrotransposon protein, putative [Theobroma... 150 1e-34
emb|CAE03840.1| OSJNBb0013J13.17 [Oryza sativa Japonica Group] 150 1e-34
gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subc... 150 2e-34
gb|ABA94234.1| retrotransposon protein, putative, Ty3-gypsy subc... 150 2e-34
gb|ABF93914.1| retrotransposon protein, putative, Ty3-gypsy subc... 150 2e-34
emb|CAJ86189.1| H0306F03.2 [Oryza sativa Indica Group] 150 2e-34
>emb|CAA73042.1| polyprotein [Ananas comosus]
Length = 871
Score = 176 bits (446), Expect = 3e-42
Identities = 91/153 (59%), Positives = 109/153 (71%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YLYG +CE YT HKSLKY FTQKELN+RQRRWLEL+KDYD TILYHPGKANVVADALSRK
Sbjct: 369 YLYGERCEVYTDHKSLKYLFTQKELNLRQRRWLELLKDYDLTILYHPGKANVVADALSRK 428
Query: 295 GEGQVAVLITQQEALVKDFEKLSLEVVGPSTTKVILVALVIQPTLRERIKKAQESDGFLQ 116
+A+ + Q L++ ++L LE+V P T + L+ LV+QPTL +RIK+ Q SD LQ
Sbjct: 429 SMENLAMHVVTQPRLIEQMKRLELEIVTPD-TPMRLMTLVVQPTLLDRIKEKQASDVELQ 487
Query: 115 KMKSGEGGDNVKRFTLASDGTLMFGGRICVPKD 17
K+K FTL DG + F GRICVP D
Sbjct: 488 KIKGKMVDGCTGDFTLDGDGLMRFRGRICVPAD 520
>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
Length = 923
Score = 166 bits (420), Expect = 3e-39
Identities = 88/153 (57%), Positives = 107/153 (69%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YLYG K + +T HKSLKYFFTQKELNMRQRRWLELVKDYDC ILYHPGKANVVADALSRK
Sbjct: 345 YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 404
Query: 295 GEGQVAVLITQQEALVKDFEKLSLEVVGPSTTKVILVALVIQPTLRERIKKAQESDGFLQ 116
A LIT+Q L +D E+ + V+ + T + L L +QPTLR+RI AQ +D +L
Sbjct: 405 -VSHSAALITRQAPLHRDLERAEIAVLVGAVT-MQLAQLTVQPTLRQRIIDAQSNDPYLV 462
Query: 115 KMKSGEGGDNVKRFTLASDGTLMFGGRICVPKD 17
+ + F+L+SDG L+F R+CVP D
Sbjct: 463 EKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 495
>gb|ABA95101.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1651
Score = 160 bits (406), Expect = 1e-37
Identities = 84/156 (53%), Positives = 105/156 (67%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YL G++CE YT HKSLKY FTQ ELNMRQRRWLEL+KDY+ I YHPGKANVVADALSRK
Sbjct: 1121 YLIGNRCEIYTNHKSLKYIFTQSELNMRQRRWLELIKDYNFGIHYHPGKANVVADALSRK 1180
Query: 295 GEGQVAVLITQQEALVKDFEKLSLEVVGPSTTKVILVALVIQPTLRERIKKAQESDGFLQ 116
A++ Q+ L ++ EKL L VV L +L +QPTL +I++AQ DG ++
Sbjct: 1181 PYCATALVWPTQDDLCREVEKLKLTVVPTGN----LASLAVQPTLEAQIREAQSDDGIMK 1236
Query: 115 KMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKEL 8
+MK +K FT+ + T+ FG RICVP KEL
Sbjct: 1237 EMKDKIRKKRLKGFTIDNQDTVWFGSRICVPAKKEL 1272
>gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1122
Score = 154 bits (390), Expect = 9e-36
Identities = 81/156 (51%), Positives = 104/156 (66%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YL G++CE YT HKSLKY FTQ ELNMRQRRWLEL+KDY+ I YHPGKAN+VADALSRK
Sbjct: 654 YLIGNRCEIYTDHKSLKYIFTQSELNMRQRRWLELIKDYNLGIHYHPGKANMVADALSRK 713
Query: 295 GEGQVAVLITQQEALVKDFEKLSLEVVGPSTTKVILVALVIQPTLRERIKKAQESDGFLQ 116
A++ Q+ L ++ EKL L +V L +L +QPTL +I++AQ+ D ++
Sbjct: 714 TYCATALVWPTQDNLCREIEKLKLTMVPTGN----LASLTVQPTLETQIREAQQEDEGMK 769
Query: 115 KMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKEL 8
+MK +K FT+ T+ FG RICVP KEL
Sbjct: 770 EMKGKIRKKRLKGFTIDDQDTVWFGSRICVPARKEL 805
>ref|XP_007032152.1| Retrotransposon protein, putative [Theobroma cacao]
gi|508711181|gb|EOY03078.1| Retrotransposon protein,
putative [Theobroma cacao]
Length = 1263
Score = 154 bits (388), Expect = 2e-35
Identities = 82/163 (50%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YLYG CE YT HKSLKY F Q++LN+RQRRW+EL+KDYDCTILYHPGKANVVADA SRK
Sbjct: 707 YLYGETCEIYTDHKSLKYIFQQRDLNLRQRRWMELLKDYDCTILYHPGKANVVADAFSRK 766
Query: 295 GEGQVAVLITQQEALVKDFEKLS-----LEVVGPSTTKVILVALVIQPTLRERIKKAQES 131
G +A + T + +LVK+ L LEV + T +L ++P L ++IK+AQ
Sbjct: 767 SMGSLAHISTGRRSLVKEIHSLGDIGVHLEV---AETNALLAHFRVRPILMDKIKEAQSK 823
Query: 130 DGFLQKMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKELIR 2
D F+ K G K FT +DG L +G R+ VP L R
Sbjct: 824 DEFVTKAIEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRR 866
>ref|XP_007036977.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508774222|gb|EOY21478.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 878
Score = 153 bits (387), Expect = 2e-35
Identities = 82/163 (50%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YLYG CE YT HKSLKY F Q++LN+RQRRW+EL+KDYDCTILYHPGKANVVADALSRK
Sbjct: 475 YLYGETCEIYTDHKSLKYIFQQRDLNLRQRRWMELLKDYDCTILYHPGKANVVADALSRK 534
Query: 295 GEGQVAVLITQQEALVKDFEKLS-----LEVVGPSTTKVILVALVIQPTLRERIKKAQES 131
G +A + + +LV++ L LEV + T +L ++P L +RIK+AQ
Sbjct: 535 SMGSLAHIFIGRRSLVREIHSLGDIGVRLEV---AETNALLAHFRVRPILMDRIKEAQSK 591
Query: 130 DGFLQKMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKELIR 2
D F+ K G K FT +DG L +G R+ VP L R
Sbjct: 592 DEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRR 634
>ref|XP_007014044.1| CCHC-type integrase [Theobroma cacao] gi|508784407|gb|EOY31663.1|
CCHC-type integrase [Theobroma cacao]
Length = 395
Score = 152 bits (385), Expect = 4e-35
Identities = 82/163 (50%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YLYG CE YT HKSLKY F Q++LN+RQRRW+EL+KDYDCTILYHPGKANVVADALSRK
Sbjct: 101 YLYGETCEIYTDHKSLKYIFQQRDLNLRQRRWMELLKDYDCTILYHPGKANVVADALSRK 160
Query: 295 GEGQVAVLITQQEALVKDFEKLS-----LEVVGPSTTKVILVALVIQPTLRERIKKAQES 131
G +A + + +LV++ L LEV + T +L ++P L +RIK+AQ
Sbjct: 161 SMGSLAHISIGRRSLVREIHSLGDIGVRLEV---AETNALLAHFRVRPILMDRIKEAQSK 217
Query: 130 DGFLQKMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKELIR 2
D F+ K G K FT +DG L +G R+ VP L R
Sbjct: 218 DEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRR 260
>ref|XP_007022574.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508722202|gb|EOY14099.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1502
Score = 152 bits (385), Expect = 4e-35
Identities = 82/163 (50%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YLYG CE YT HKSLKY F Q++LN+RQRRW+EL+KDYDCTILYHPGKANVVADALSRK
Sbjct: 990 YLYGETCEIYTDHKSLKYIFQQRDLNLRQRRWMELLKDYDCTILYHPGKANVVADALSRK 1049
Query: 295 GEGQVAVLITQQEALVKDFEKLS-----LEVVGPSTTKVILVALVIQPTLRERIKKAQES 131
G +A + + +LV++ L LEV + T +L ++P L +RIK+AQ
Sbjct: 1050 SMGSLAHISIGRRSLVREIHSLGDIGVRLEV---AETNALLAHFRVRPILMDRIKEAQSK 1106
Query: 130 DGFLQKMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKELIR 2
D F+ K G K FT +DG L +G R+ VP L R
Sbjct: 1107 DEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRR 1149
>emb|CAE01541.2| OSJNBa0033G05.1 [Oryza sativa Japonica Group]
gi|38347324|emb|CAE05974.2| OSJNBa0063C18.15 [Oryza
sativa Japonica Group]
Length = 1764
Score = 152 bits (384), Expect = 5e-35
Identities = 80/156 (51%), Positives = 103/156 (66%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YL G++CE YT HKSLKY FTQ ELNMRQRRWLEL+KDYD I YHPGKANVVADALSRK
Sbjct: 1234 YLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLRIHYHPGKANVVADALSRK 1293
Query: 295 GEGQVAVLITQQEALVKDFEKLSLEVVGPSTTKVILVALVIQPTLRERIKKAQESDGFLQ 116
VA + Q+ L ++ EKL L +V P + +L +QPTL +I++AQ+ D ++
Sbjct: 1294 AYCNVAQIRPDQDHLCRELEKLRLTMVQPG----VPASLTVQPTLESQIREAQKDDEGIK 1349
Query: 115 KMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKEL 8
++ F++ + GT+ G RICVP KEL
Sbjct: 1350 ELIKRIQEKKDTNFSIDNQGTVWCGPRICVPAKKEL 1385
>gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1759
Score = 152 bits (383), Expect = 6e-35
Identities = 81/156 (51%), Positives = 101/156 (64%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YL G++CE YT HKSLKY FTQ ELNMRQRRWLEL+KDYD I YHPGKANVVADALSRK
Sbjct: 1185 YLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRK 1244
Query: 295 GEGQVAVLITQQEALVKDFEKLSLEVVGPSTTKVILVALVIQPTLRERIKKAQESDGFLQ 116
V + Q+ L +D EKL L VV + +L +QPTL +I+KAQ+ D ++
Sbjct: 1245 TYCNVDQIRPDQDRLCRDLEKLRLTVVQSG----VAASLTVQPTLESQIRKAQKDDEGIK 1300
Query: 115 KMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKEL 8
++ F++ GT+ +G RICVP KEL
Sbjct: 1301 ELIKRIQEKKDTDFSIDDQGTVWYGPRICVPAKKEL 1336
>ref|XP_007099730.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508728378|gb|EOY20275.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 562
Score = 151 bits (382), Expect = 8e-35
Identities = 81/163 (49%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YLYG CE YT HKSLKY F Q++LN+RQRRW+EL+KDYDCTILYHPGKANVVADALSRK
Sbjct: 14 YLYGETCEIYTDHKSLKYIFQQRDLNLRQRRWMELLKDYDCTILYHPGKANVVADALSRK 73
Query: 295 GEGQVAVLITQQEALVKDFEKLS-----LEVVGPSTTKVILVALVIQPTLRERIKKAQES 131
G +A + + +LV++ L LEV + T +L ++P L ++IK+AQ
Sbjct: 74 SMGSLAHISIGRRSLVREIHSLGDIGVRLEV---AETNALLAHFRVRPILMDKIKEAQSK 130
Query: 130 DGFLQKMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKELIR 2
D F+ K G K FT +DG L +G R+ VP L R
Sbjct: 131 DEFVIKALEDPRGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRR 173
>ref|XP_007028176.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508716781|gb|EOY08678.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 666
Score = 151 bits (382), Expect = 8e-35
Identities = 81/163 (49%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YLYG CE YT HKSLKY F Q++LN+RQRRW+EL+KDYDCTILYHPGKANVVADALSRK
Sbjct: 192 YLYGETCEIYTDHKSLKYIFQQRDLNLRQRRWMELLKDYDCTILYHPGKANVVADALSRK 251
Query: 295 GEGQVAVLITQQEALVKDFEKLS-----LEVVGPSTTKVILVALVIQPTLRERIKKAQES 131
G +A + + +LV++ L LEV + T +L ++P L ++IK+AQ
Sbjct: 252 SMGSLAHISIGRRSLVREIHSLGDIGVRLEV---AETNALLAHFRVRPILMDKIKEAQSK 308
Query: 130 DGFLQKMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKELIR 2
D F+ K G K FT +DG L +G R+ VP L R
Sbjct: 309 DEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRR 351
>ref|XP_007014630.1| CCHC-type integrase [Theobroma cacao] gi|508784993|gb|EOY32249.1|
CCHC-type integrase [Theobroma cacao]
Length = 282
Score = 151 bits (381), Expect = 1e-34
Identities = 81/163 (49%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YLYG CE YT HKSLKY F Q++L++RQRRW+EL+KDYDCTILYHPGKANVVADALSRK
Sbjct: 79 YLYGETCEIYTDHKSLKYIFQQRDLDLRQRRWMELLKDYDCTILYHPGKANVVADALSRK 138
Query: 295 GEGQVAVLITQQEALVKDFEKLS-----LEVVGPSTTKVILVALVIQPTLRERIKKAQES 131
G +A + + +LV++ L LEV + T +L ++P L +RIK+AQ
Sbjct: 139 SMGSLAHISIGRRSLVREIHSLGDIGVRLEV---AETNALLAHFRVRPILMDRIKEAQSK 195
Query: 130 DGFLQKMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKELIR 2
D F+ K G K FT +DG L +G R+ VP L R
Sbjct: 196 DEFMIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRR 238
>ref|XP_007023829.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508779195|gb|EOY26451.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 679
Score = 151 bits (381), Expect = 1e-34
Identities = 81/163 (49%), Positives = 102/163 (62%), Gaps = 5/163 (3%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YLYG CE YT HKSLKY F Q++ N+RQRRW+EL+KDYDCTILYHPGKANVVADALSRK
Sbjct: 98 YLYGETCEIYTDHKSLKYIFQQRDFNLRQRRWMELLKDYDCTILYHPGKANVVADALSRK 157
Query: 295 GEGQVAVLITQQEALVKDFEKLS-----LEVVGPSTTKVILVALVIQPTLRERIKKAQES 131
G +A + + +LV++ L LEV + T +L ++P L +RIK+AQ
Sbjct: 158 SMGSLAHISIGRRSLVREIHSLGDIGVRLEV---AETNALLAHFRVRPILMDRIKEAQSK 214
Query: 130 DGFLQKMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKELIR 2
D F+ K G K FT +DG L +G R+ VP L R
Sbjct: 215 DEFVIKALEDPRGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRR 257
>ref|XP_007032220.1| Retrotransposon protein, putative [Theobroma cacao]
gi|508711249|gb|EOY03146.1| Retrotransposon protein,
putative [Theobroma cacao]
Length = 1480
Score = 150 bits (380), Expect = 1e-34
Identities = 81/163 (49%), Positives = 102/163 (62%), Gaps = 5/163 (3%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YLYG CE YT HKSLKY F Q++LN+RQ RW+EL+KDYDCTILYHPGKANVVADALSRK
Sbjct: 995 YLYGETCEIYTDHKSLKYIFQQRDLNLRQHRWMELLKDYDCTILYHPGKANVVADALSRK 1054
Query: 295 GEGQVAVLITQQEALVKDFEKLS-----LEVVGPSTTKVILVALVIQPTLRERIKKAQES 131
G +A + + +LV++ L LEV + T +L ++P L +RIK+AQ
Sbjct: 1055 SMGSLAHISIGRRSLVREIHSLGDIGVRLEV---AETNALLAHFRVRPILMDRIKEAQSK 1111
Query: 130 DGFLQKMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKELIR 2
D F+ K G K FT +DG L +G R+ VP L R
Sbjct: 1112 DEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRR 1154
>emb|CAE03840.1| OSJNBb0013J13.17 [Oryza sativa Japonica Group]
Length = 864
Score = 150 bits (380), Expect = 1e-34
Identities = 81/156 (51%), Positives = 101/156 (64%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YL G++CE YT HKSLKY FTQ ELNMRQRRWLEL+KDYD I YHPGKANVVADALSRK
Sbjct: 440 YLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRK 499
Query: 295 GEGQVAVLITQQEALVKDFEKLSLEVVGPSTTKVILVALVIQPTLRERIKKAQESDGFLQ 116
VA + QE L ++ EKL L VV + +L +QPTL +I++AQ+ D ++
Sbjct: 500 AYCNVAQIRPDQEHLCRELEKLRLTVVQSG----VPASLTVQPTLESQIREAQKDDEGIK 555
Query: 115 KMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKEL 8
++ F++ GT+ G RICVP KEL
Sbjct: 556 ELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKEL 591
>gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1851
Score = 150 bits (378), Expect = 2e-34
Identities = 80/156 (51%), Positives = 101/156 (64%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YL G++CE YT HKSLKY FTQ ELNMRQRRWLEL+KDYD I YHPGKANVVADALSRK
Sbjct: 1277 YLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRK 1336
Query: 295 GEGQVAVLITQQEALVKDFEKLSLEVVGPSTTKVILVALVIQPTLRERIKKAQESDGFLQ 116
VA + Q+ L ++ EKL L VV + +L +QPTL +I++AQ+ D ++
Sbjct: 1337 AYCNVAQIRPDQDQLCRELEKLRLTVVQSG----VPASLTVQPTLESQIREAQKEDEGIK 1392
Query: 115 KMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKEL 8
++ F++ GT+ G RICVP KEL
Sbjct: 1393 ELIERIQEKKDTNFSIDDQGTVWCGPRICVPAKKEL 1428
>gb|ABA94234.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1214
Score = 150 bits (378), Expect = 2e-34
Identities = 80/156 (51%), Positives = 101/156 (64%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YL G++CE YT HKSLKY FTQ ELNMRQRRWLEL+KDYD I YHPGKANVVADALSRK
Sbjct: 661 YLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRK 720
Query: 295 GEGQVAVLITQQEALVKDFEKLSLEVVGPSTTKVILVALVIQPTLRERIKKAQESDGFLQ 116
VA + Q+ L ++ EKL L VV + +L +QPTL +I++AQ+ D ++
Sbjct: 721 AYCNVAQIRPDQDRLCRELEKLRLTVVQSG----VPASLTVQPTLESQIREAQKDDEGIK 776
Query: 115 KMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKEL 8
++ F++ GT+ G RICVP KEL
Sbjct: 777 ELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKEL 812
>gb|ABF93914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1776
Score = 150 bits (378), Expect = 2e-34
Identities = 80/156 (51%), Positives = 101/156 (64%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YL G++CE YT HKSLKY FTQ ELNMRQRRWLEL+KDYD I YHPGKANVVADALSRK
Sbjct: 1202 YLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRK 1261
Query: 295 GEGQVAVLITQQEALVKDFEKLSLEVVGPSTTKVILVALVIQPTLRERIKKAQESDGFLQ 116
VA + Q+ L ++ EKL L VV + +L +QPTL +I++AQ+ D ++
Sbjct: 1262 AYCNVAQIRPDQDHLCRELEKLRLTVVQSG----VPASLTVQPTLESQIREAQKDDEGVK 1317
Query: 115 KMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKEL 8
++ F++ GT+ G RICVP KEL
Sbjct: 1318 ELIKRIQEKKDTNFSIDDQGTVWCGSRICVPAKKEL 1353
>emb|CAJ86189.1| H0306F03.2 [Oryza sativa Indica Group]
Length = 1135
Score = 150 bits (378), Expect = 2e-34
Identities = 79/156 (50%), Positives = 102/156 (65%)
Frame = -3
Query: 475 YLYGSKCETYTYHKSLKYFFTQKELNMRQRRWLELVKDYDCTILYHPGKANVVADALSRK 296
YL G++CE YT HKSLKY FTQ ELNMRQRRWLEL+KDYD I YHPGKANVVADALSRK
Sbjct: 561 YLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRK 620
Query: 295 GEGQVAVLITQQEALVKDFEKLSLEVVGPSTTKVILVALVIQPTLRERIKKAQESDGFLQ 116
+A + Q+ L ++ EKL L VV + +L +QPTL +I++AQ+ D ++
Sbjct: 621 AYCNIAQIRPDQDRLCRELEKLRLTVVQSG----VPASLTVQPTLESQIREAQKDDEGIK 676
Query: 115 KMKSGEGGDNVKRFTLASDGTLMFGGRICVPKDKEL 8
++ F++ + GT+ G RICVP KEL
Sbjct: 677 ELIKRIQEKKDTNFSIDNQGTVWCGPRICVPAKKEL 712