BLASTX nr result

ID: Mentha29_contig00043537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00043537
         (273 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210...    65   1e-08
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    61   2e-07
ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209...    60   2e-07
gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H...    57   3e-06
ref|XP_006593124.1| PREDICTED: uncharacterized protein LOC102666...    56   6e-06

>ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210176 [Cucumis sativus]
          Length = 1740

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/91 (38%), Positives = 50/91 (54%)
 Frame = -1

Query: 273 ALSRRDGEV*LSTLSKVEWLGFEGIEVEQRGDEYLNGIIEAIQRRPDSKPGFRLVGTKLF 94
           ALSR +  V L+TL     L  E +  E + DE L GIIE ++  P+ K  ++ V  KL 
Sbjct: 235 ALSRMNPTVELNTLISRRLLDVEMVMEEVKRDEELQGIIEVLKENPEGKANYQWVSDKLL 294

Query: 93  LHNRIAIPAASRWVSELLHEFHDTPLGGHTG 1
              R+ +   S  +  LLH FH++ LGGH+G
Sbjct: 295 YKGRLVLSKTSSLIPTLLHTFHNSVLGGHSG 325


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/91 (35%), Positives = 50/91 (54%)
 Frame = -1

Query: 273  ALSRRDGEV*LSTLSKVEWLGFEGIEVEQRGDEYLNGIIEAIQRRPDSKPGFRLVGTKLF 94
            ALSR  GE  L+ ++    L  + +E E + D+ L  I E + + PDS P + +   +LF
Sbjct: 790  ALSRIPGEAQLNAIAVPSILDVKVVEKEVQEDDKLKDIFEQLLKDPDSIPRYSIKQGRLF 849

Query: 93   LHNRIAIPAASRWVSELLHEFHDTPLGGHTG 1
               R+ +P  S  +  +LH FHD  +GGH+G
Sbjct: 850  YKGRLVLPKTSSLLPTILHTFHDLVVGGHSG 880


>ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209704 [Cucumis sativus]
          Length = 1503

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/91 (37%), Positives = 48/91 (52%)
 Frame = -1

Query: 273  ALSRRDGEV*LSTLSKVEWLGFEGIEVEQRGDEYLNGIIEAIQRRPDSKPGFRLVGTKLF 94
            ALSR +  V +  +S    +  E +E E   DE L  IIE +++ PD    F+ V   L+
Sbjct: 1247 ALSRIEQPVEMKNMSTTGIVNMEVVEKEVELDEELKAIIEELKQNPDEPSKFQWVNGNLW 1306

Query: 93   LHNRIAIPAASRWVSELLHEFHDTPLGGHTG 1
               RI +   S  +  LLH FHD+ LGGH+G
Sbjct: 1307 YKKRIVLSKESTLIPTLLHTFHDSILGGHSG 1337


>gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 657

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/68 (41%), Positives = 40/68 (58%)
 Frame = -1

Query: 222 EWLGFEGIEVEQRGDEYLNGIIEAIQRRPDSKPGFRLVGTKLFLHNRIAIPAASRWVSEL 43
           EWL  + +  E   DE L GII A+Q+   +KPGF      LF  +R+ + A S+W+ +L
Sbjct: 291 EWLEGKEVLEEVHKDEVLKGIISALQKGEPTKPGFAYRRGVLFYEDRLVLAANSKWIPKL 350

Query: 42  LHEFHDTP 19
           L EFH +P
Sbjct: 351 LLEFHSSP 358


>ref|XP_006593124.1| PREDICTED: uncharacterized protein LOC102666716 [Glycine max]
          Length = 165

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
 Frame = -1

Query: 273 ALSRRDGEV*LSTLSKVE-WLGFEGIEVEQRGDEYLNGIIEAIQRRPDSK--PGFRLVGT 103
           ALSR   E+ L+ +     WL ++ I  E   DE L  IIE +++    K   GF     
Sbjct: 68  ALSRSRDEMELNNVIYFPVWLDWQEINAEVHTDEKLRKIIEEVKKGQGEKINAGFVYRQG 127

Query: 102 KLFLHNRIAIPAASRWVSELLHEFHDTPLGGHTG 1
            L+  NR+ IP    W+ + L EFH TP GGH+G
Sbjct: 128 VLYYKNRLVIPEKLAWIPKFLEEFHATPEGGHSG 161


Top