BLASTX nr result
ID: Mentha29_contig00043184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00043184
(492 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD96942.1| hypothetical protein [Cleome spinosa] 173 3e-41
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 168 6e-40
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 163 2e-38
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 158 6e-37
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 158 6e-37
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 157 2e-36
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 155 4e-36
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 154 2e-35
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 153 3e-35
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 153 3e-35
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 153 3e-35
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 152 5e-35
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 152 6e-35
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 152 6e-35
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 151 1e-34
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 151 1e-34
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 151 1e-34
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 151 1e-34
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 150 1e-34
ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256... 149 3e-34
>gb|ABD96942.1| hypothetical protein [Cleome spinosa]
Length = 402
Score = 173 bits (438), Expect = 3e-41
Identities = 81/157 (51%), Positives = 108/157 (68%)
Frame = -2
Query: 479 EFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSVIPAL 300
EFF NG+LL++LN T+I L+PK P+A GDFRPI+CCN +YK ++P L
Sbjct: 2 EFFRNGKLLKELNATIITLVPKIPEAINLGDFRPISCCNFLYKVISKIIANRLQLLLPWL 61
Query: 299 VNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLREVLL 120
++ Q+AF GRSM D+I LA EL++ Y R P MLKID++KA+DSISWDF+ ++L
Sbjct: 62 ISGNQAAFQKGRSMGDHIMLAAELVKDYNRPSAEPSAMLKIDIKKAFDSISWDFILDILR 121
Query: 119 GLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRR 9
L P+ F WI EC+TS SFS+AING GFF+G+R
Sbjct: 122 ALDLPLVFIGWIRECITSPSFSVAINGELAGFFRGKR 158
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 168 bits (426), Expect = 6e-40
Identities = 78/161 (48%), Positives = 107/161 (66%)
Frame = -2
Query: 485 IQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSVIP 306
IQEFF N R+ R +N ++ L+PK A + +FRPIACC ++YK +I
Sbjct: 481 IQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIG 540
Query: 305 ALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLREV 126
+VNEAQS F+ GR + DNI LA ELIR Y R+ +SPRC++K+D+RKAYDS+ W FL +
Sbjct: 541 EVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETL 600
Query: 125 LLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
L GFP RF WIMECV+++S+S+ +NG F+ R+GL
Sbjct: 601 LYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGL 641
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 163 bits (413), Expect = 2e-38
Identities = 75/162 (46%), Positives = 109/162 (67%)
Frame = -2
Query: 488 AIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSVI 309
A+QEFF +GRLL Q N T + ++PK P+A + +FRPI+CCN +YK +++
Sbjct: 488 AVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKLLARRLENIL 547
Query: 308 PALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLRE 129
P ++ +QSAFV GR + +N+ LA EL++ + + IS R +LK+DLRKA+DS+ W F+ E
Sbjct: 548 PLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWGFIIE 607
Query: 128 VLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
L P RF NWI +C+TS SFSI ++GS G+FKG +GL
Sbjct: 608 TLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGL 649
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 158 bits (400), Expect = 6e-37
Identities = 73/162 (45%), Positives = 109/162 (67%)
Frame = -2
Query: 488 AIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSVI 309
AI EFF +G+LL+Q N T + LIPK+ +A +FRPI+C N +YK ++
Sbjct: 349 AIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLL 408
Query: 308 PALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLRE 129
A++ +QSAF+ GRS+ +N+ LA E++ Y R ISPR MLK+DL+KA+DS+ W+F+
Sbjct: 409 SAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTA 468
Query: 128 VLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
L L P R+ NWI +C+T+ SF+I++NG+T GFF+ +GL
Sbjct: 469 ALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGL 510
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 158 bits (400), Expect = 6e-37
Identities = 73/162 (45%), Positives = 109/162 (67%)
Frame = -2
Query: 488 AIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSVI 309
AI EFF +G+LL+Q N T + LIPK+ +A +FRPI+C N +YK ++
Sbjct: 349 AIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLL 408
Query: 308 PALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLRE 129
A++ +QSAF+ GRS+ +N+ LA E++ Y R ISPR MLK+DL+KA+DS+ W+F+
Sbjct: 409 SAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTA 468
Query: 128 VLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
L L P R+ NWI +C+T+ SF+I++NG+T GFF+ +GL
Sbjct: 469 ALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGL 510
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 157 bits (396), Expect = 2e-36
Identities = 74/163 (45%), Positives = 105/163 (64%)
Frame = -2
Query: 491 EAIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSV 312
EAI EFF +G+LL+Q N T + LIPK +A DFRPI+C N VYK
Sbjct: 385 EAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFRPISCLNTVYKVISKLLTDRLKDF 444
Query: 311 IPALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLR 132
+PA ++ +QSAF+ GR ++N+ LA EL+ Y ++ I+P MLK+DLRKA+DS+ WDF+
Sbjct: 445 LPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRWDFIV 504
Query: 131 EVLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
L L P +FT WI+EC+++ SFS+ +NG + G F +GL
Sbjct: 505 SALRALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKGL 547
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 155 bits (393), Expect = 4e-36
Identities = 71/162 (43%), Positives = 108/162 (66%)
Frame = -2
Query: 488 AIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSVI 309
A++EFF++G LL+Q N T I LIPK P+A DFRPI+C N +YK ++
Sbjct: 467 AVREFFISGNLLKQWNATTIVLIPKFPNASCTSDFRPISCMNTLYKVIARLLTDRLQKLL 526
Query: 308 PALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLRE 129
+++ +QSAF+ GR + +N+ LA E++ Y + IS R MLK+DLRKA+DS+ W+F+
Sbjct: 527 SCVISPSQSAFLPGRLLAENVLLATEMVHGYNWRNISLRGMLKVDLRKAFDSVRWEFIIA 586
Query: 128 VLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
LL LG P +F NWI +C+++ +F++++NG GFFK +GL
Sbjct: 587 ALLALGVPTKFINWIHQCISTPTFTVSVNGCCGGFFKSAKGL 628
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 154 bits (388), Expect = 2e-35
Identities = 70/162 (43%), Positives = 105/162 (64%)
Frame = -2
Query: 488 AIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSVI 309
AIQ FF+ G L + LN T++ALIPK +A + D+RPI+CCN++YK ++
Sbjct: 792 AIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLL 851
Query: 308 PALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLRE 129
P+ + + QSAFV R +M+N+ LA EL++ Y ++ ++PRC +KID+ KA+DS+ W FL
Sbjct: 852 PSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLN 911
Query: 128 VLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
L L FP F +WI C+++ +FS+ +NG GFF RGL
Sbjct: 912 TLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGL 953
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 153 bits (386), Expect = 3e-35
Identities = 71/162 (43%), Positives = 103/162 (63%)
Frame = -2
Query: 488 AIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSVI 309
A+Q FF G L + +N T++ALIPK +A++ D+RPI+CCN++YK V+
Sbjct: 495 AVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVL 554
Query: 308 PALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLRE 129
P + QSAFV R +++N+ LA EL++ Y + IS RC +KID+ KA+DS+ W FL
Sbjct: 555 PKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLIN 614
Query: 128 VLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
V LGFP F +WI C+T+ SFS+ +NG G+F+ RGL
Sbjct: 615 VFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGL 656
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 153 bits (386), Expect = 3e-35
Identities = 70/162 (43%), Positives = 103/162 (63%)
Frame = -2
Query: 488 AIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSVI 309
AI+ FF+ G L + LN T++ALIPK +A D+RPI+CCN++YK ++
Sbjct: 68 AIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVML 127
Query: 308 PALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLRE 129
P + + QSAFV R +++N+ LA EL++ Y + ISPRC +KID+ KA+DS+ W FL
Sbjct: 128 PTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLN 187
Query: 128 VLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
L L FP F +WI C+++ +FS+ +NG GFF +RGL
Sbjct: 188 TLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGL 229
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 153 bits (386), Expect = 3e-35
Identities = 71/162 (43%), Positives = 104/162 (64%)
Frame = -2
Query: 488 AIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSVI 309
AIQ FF G L + +N T++ALIPK +A++ D+RPI+CCN++YKA ++
Sbjct: 216 AIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRIL 275
Query: 308 PALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLRE 129
P + QSAFV R +++N+ LA EL++ Y + IS RC +KID+ KA+DS+ W FL
Sbjct: 276 PKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTH 335
Query: 128 VLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
VL + FP F +WI C+++ SFSI +NG G+F+ RGL
Sbjct: 336 VLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGL 377
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 152 bits (384), Expect = 5e-35
Identities = 70/160 (43%), Positives = 103/160 (64%)
Frame = -2
Query: 488 AIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSVI 309
A++ FF G L + +N T++ALIPK +AK+ D+RPI+CCN++YK V+
Sbjct: 910 AVKSFFEKGFLPKGVNTTILALIPKKLEAKEMKDYRPISCCNVIYKVISKIIANRLKHVL 969
Query: 308 PALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLRE 129
P + QSAFV R +++N+ LA EL++ Y + IS RC +KID+ KA+DS+ W FL+
Sbjct: 970 PNFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISGRCAIKIDISKAFDSVQWSFLKN 1029
Query: 128 VLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRR 9
VL L FP F +W+M CVT+ SFS+ +NG G+F+ R
Sbjct: 1030 VLSALDFPPEFVHWVMLCVTTASFSVQVNGELAGYFQSSR 1069
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 152 bits (383), Expect = 6e-35
Identities = 74/167 (44%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
Frame = -2
Query: 491 EAIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNL----VYKAXXXXXXXX 324
+A+ EFF + LL+Q N T + LIPK +A K DFRPI+C + +YK
Sbjct: 437 DAVSEFFTSSVLLKQWNATTLVLIPKITNASKMNDFRPISCNDFGPITLYKVIARLLTNR 496
Query: 323 XXSVIPALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISW 144
++ +++ QSAF+ GR + +N+ LA EL++ Y RQ I PR MLK+DLRKA+DSI W
Sbjct: 497 LQCLLSQVISPFQSAFLPGRFLAENVLLATELVQGYNRQNIDPRGMLKVDLRKAFDSIRW 556
Query: 143 DFLREVLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
DF+ L +G P RF WI +C+++ +FS+ +NG+T GFFK RGL
Sbjct: 557 DFIISALKAIGIPDRFVYWITQCISTPTFSVCVNGNTGGFFKSTRGL 603
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 152 bits (383), Expect = 6e-35
Identities = 75/163 (46%), Positives = 104/163 (63%)
Frame = -2
Query: 491 EAIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSV 312
E I +FF NG + + +N T + LIPK +AK D+RPIACC+ +YK +V
Sbjct: 482 EGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAV 541
Query: 311 IPALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLR 132
I +V+ AQ+ F+ R + DNI LA ELIR Y R+ +SPRC++K+D+RKAYDS+ W FL
Sbjct: 542 ITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLE 601
Query: 131 EVLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
+L LGFP F WIM CV ++S+SI +NG F ++GL
Sbjct: 602 SMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGL 644
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 151 bits (381), Expect = 1e-34
Identities = 71/163 (43%), Positives = 105/163 (64%)
Frame = -2
Query: 491 EAIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSV 312
+AI+EFF +G LL+Q N T I LIPK + DFRPI+C N +YK +
Sbjct: 488 DAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIARLLTDRLQRL 547
Query: 311 IPALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLR 132
+ +++ AQSAF+ GRS+ +N+ LA +L+ Y ISPR MLK+DL+KA+DS+ W+F+
Sbjct: 548 LSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFVI 607
Query: 131 EVLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
L L P +F NWI +C+++ +F+++ING GFFK +GL
Sbjct: 608 AALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGL 650
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 151 bits (381), Expect = 1e-34
Identities = 70/163 (42%), Positives = 105/163 (64%)
Frame = -2
Query: 491 EAIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSV 312
EA+QEFF +G+LL+Q N T + LIPK ++ K DFRPI+C N +YK +
Sbjct: 489 EAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKL 548
Query: 311 IPALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLR 132
+ +++ +QSAF+ GR + +N+ LA E++ Y + IS R MLK+DLRKA+DS+ WDF+
Sbjct: 549 LNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFII 608
Query: 131 EVLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
L P +F WI +C+++ FS+ +NGS+ GFFK +GL
Sbjct: 609 SAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGL 651
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 151 bits (381), Expect = 1e-34
Identities = 71/162 (43%), Positives = 101/162 (62%)
Frame = -2
Query: 488 AIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSVI 309
AIQ FF G L + +N T++ALIPK +AK+ D+RPI+CCN++YK V+
Sbjct: 383 AIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPISCCNVLYKVISKIIANRLKLVL 442
Query: 308 PALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLRE 129
P + QSAFV R +++N+ LA E+++ Y + +S RC LKID+ KA+DS+ W FL
Sbjct: 443 PKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKAFDSVQWKFLIN 502
Query: 128 VLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
VL + FP FT+WI C+T+ SFS+ +NG G F R L
Sbjct: 503 VLEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFSSAREL 544
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 151 bits (381), Expect = 1e-34
Identities = 70/163 (42%), Positives = 105/163 (64%)
Frame = -2
Query: 491 EAIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSV 312
EA+QEFF +G+LL+Q N T + LIPK ++ K DFRPI+C N +YK +
Sbjct: 489 EAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKL 548
Query: 311 IPALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLR 132
+ +++ +QSAF+ GR + +N+ LA E++ Y + IS R MLK+DLRKA+DS+ WDF+
Sbjct: 549 LNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFII 608
Query: 131 EVLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
L P +F WI +C+++ FS+ +NGS+ GFFK +GL
Sbjct: 609 SAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGL 651
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 150 bits (380), Expect = 1e-34
Identities = 70/163 (42%), Positives = 107/163 (65%)
Frame = -2
Query: 491 EAIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSV 312
+AI +FF G + + +N T + L+PK + +FRPIACC+++YK V
Sbjct: 162 DAILDFFKTGFMPKIINCTYMTLLPKEVNVTSVKNFRPIACCSVIYKIISKILTSRMQGV 221
Query: 311 IPALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLR 132
+ ++V+E QSAFV GR + DNI L+ EL++ Y R+ ISPRCM+KIDL+KAY+S+ W F++
Sbjct: 222 LNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYNSVEWPFIK 281
Query: 131 EVLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRRGL 3
++L LGF +F NW+M C+T+ S++ ING F ++GL
Sbjct: 282 HLMLELGFSYKFVNWVMGCLTTASYTFNINGDLTRPFAAKKGL 324
>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
lycopersicum]
Length = 421
Score = 149 bits (377), Expect = 3e-34
Identities = 69/161 (42%), Positives = 100/161 (62%)
Frame = -2
Query: 491 EAIQEFFMNGRLLRQLNHTLIALIPKSPDAKKPGDFRPIACCNLVYKAXXXXXXXXXXSV 312
E +Q FF G+L + N TL++LIPK K ++R I CC ++YK V
Sbjct: 147 EVVQSFFKPGKLFKPFNCTLVSLIPKVQSPKNVKEYRTITCCTVLYKIISKVITNRMHDV 206
Query: 311 IPALVNEAQSAFVGGRSMMDNIFLAQELIRHYKRQRISPRCMLKIDLRKAYDSISWDFLR 132
I ++ ++Q F+ GR + +NI LA EL+ Y R+ ISPR MLKIDL+K YDS+ W FL+
Sbjct: 207 IHNVICDSQVGFILGRKISENILLAHELVNSYTRKNISPRSMLKIDLQKVYDSVEWPFLK 266
Query: 131 EVLLGLGFPIRFTNWIMECVTSISFSIAINGSTHGFFKGRR 9
+V++GLGFP FT W+M CV +++++I +NG T F R
Sbjct: 267 QVMVGLGFPDMFTQWVMHCVKTVNYTIVVNGQTTQRFDAAR 307