BLASTX nr result

ID: Mentha29_contig00043155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00043155
         (285 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus com...    62   1e-07
gb|EPS68431.1| hypothetical protein M569_06348, partial [Genlise...    60   2e-07
gb|EXB59938.1| Sister chromatid cohesion 1 protein 3 [Morus nota...    59   7e-07
ref|XP_007219331.1| hypothetical protein PRUPE_ppa019289mg, part...    58   2e-06

>ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223547692|gb|EEF49185.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 774

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = +1

Query: 16  TVLGNKFVRNLLDDTSDILRARRESPHTPLSIWKREIRRRLRKEGLFVESYATGCSADLQ 195
           TVL NKF++  L+++ DILR RRE P T L IWK  +R  LRKE +  E   TG  ADL 
Sbjct: 392 TVLTNKFMKKALENSKDILRKRREIPSTALGIWK--LRNSLRKEQVLSEPLLTGSCADLC 449

Query: 196 SLYRE-DSTKNHLDPIQETHEETNV 267
           +L ++  S K HL   +E   E  V
Sbjct: 450 NLLKDYISGKPHLTLEREVTPEPRV 474


>gb|EPS68431.1| hypothetical protein M569_06348, partial [Genlisea aurea]
          Length = 123

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 39/57 (68%)
 Frame = +1

Query: 19  VLGNKFVRNLLDDTSDILRARRESPHTPLSIWKREIRRRLRKEGLFVESYATGCSAD 189
           +L N+ +RN +DD +D++R + + P + L IW+R  R R+RK+G FVE Y  G SAD
Sbjct: 67  ILSNECMRNNIDDVADLIRNKGDIPTSALGIWRRNKRLRMRKDGFFVEPYLVGASAD 123


>gb|EXB59938.1| Sister chromatid cohesion 1 protein 3 [Morus notabilis]
          Length = 712

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = +1

Query: 19  VLGNKFVRNLLDDTSDILRARRESPHTPLSIWKREIRRRLRKEGLFVESYATGCSADLQS 198
           VL NKF++  L+D SD+ R +R+ P++ L IWK E  + LRKE  F E   TG  +DL+S
Sbjct: 369 VLTNKFMKKALEDPSDLKRKKRKIPYSTLGIWKLE--KNLRKEKGFSEPLFTGMCSDLRS 426

Query: 199 LYREDSTKNHLDPIQE 246
           ++ +D     L  ++E
Sbjct: 427 IFDKDYMSTKLQSLKE 442


>ref|XP_007219331.1| hypothetical protein PRUPE_ppa019289mg, partial [Prunus persica]
           gi|462415793|gb|EMJ20530.1| hypothetical protein
           PRUPE_ppa019289mg, partial [Prunus persica]
          Length = 690

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
 Frame = +1

Query: 19  VLGNKFVRNLLDDTSDILRARRESPHTPLSIWKREIRRRLRKEGLFVESYATGCSADLQS 198
           VL N+F+   + DTSD+LR RR  P + L +WK  +   LRKE +F +   +G  +DL++
Sbjct: 368 VLSNEFMNKTIQDTSDLLRKRRNIPCSALGVWK--LNNSLRKEQIFFQPSLSGLCSDLRN 425

Query: 199 LYRED--STKNHL 231
           +  +D  STK+HL
Sbjct: 426 ISNKDYISTKSHL 438


Top