BLASTX nr result
ID: Mentha29_contig00042714
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00042714
(456 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFV61805.1| RNA polymerase beta' subunit (chloroplast) [Origa... 197 2e-48
ref|YP_007507102.1| RNA polymerase beta' subunit (chloroplast) [... 194 1e-47
emb|CCQ71611.1| RNA polymerase beta' subunit (chloroplast) [Salv... 192 3e-47
sp|P46819.2|RPOC1_SINAL RecName: Full=DNA-directed RNA polymeras... 191 1e-46
ref|YP_009020211.1| RNA polymerase beta (chloroplast) [Castanops... 189 3e-46
gb|ABB90034.1| RNA polymerase beta I chain [Solanum tuberosum] 189 5e-46
sp|Q2VEI5.2|RPOC1_SOLTU RecName: Full=DNA-directed RNA polymeras... 189 5e-46
ref|YP_008963386.1| RNA polymerase beta (chloroplast) [Sedum sar... 188 6e-46
gb|ADD31183.1| RNA polymerase beta' subunit protein [Quercus nigra] 188 6e-46
ref|YP_009024784.1| RNA polymerase beta (chloroplast) [Trigonoba... 188 8e-46
ref|YP_007375034.1| RNA polymerase beta [Quercus rubra] gi|44142... 188 8e-46
ref|YP_004021141.1| RNA polymerase beta [Castanea mollissima] gi... 188 8e-46
gb|ABW40754.1| RNA polymerase beta subunit [Papaver somniferum] 188 8e-46
gb|ABW40753.1| RNA polymerase beta subunit [Papaver somniferum] 188 8e-46
ref|YP_008815108.1| RNA polymerase beta (chloroplast) [Scheffler... 187 1e-45
ref|YP_007890364.1| RNA polymerase beta' subunit (chloroplast) [... 187 1e-45
gb|AHH30432.1| RNA polymerase beta (chloroplast) [Bartsia inaequ... 187 1e-45
ref|YP_004940501.1| rpoC1 gene product (chloroplast) [Boea hygro... 187 1e-45
ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum in... 187 1e-45
ref|YP_001294089.1| RNA polymerase beta [Chloranthus spicatus] g... 187 1e-45
>gb|AFV61805.1| RNA polymerase beta' subunit (chloroplast) [Origanum vulgare subsp.
vulgare]
Length = 691
Score = 197 bits (500), Expect = 2e-48
Identities = 91/91 (100%), Positives = 91/91 (100%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 62 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 121
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 275
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 122 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152
>ref|YP_007507102.1| RNA polymerase beta' subunit (chloroplast) [Salvia miltiorrhiza]
gi|401879733|gb|AFQ30920.1| RNA polymerase beta' subunit
(chloroplast) [Salvia miltiorrhiza]
Length = 691
Score = 194 bits (493), Expect = 1e-47
Identities = 90/91 (98%), Positives = 90/91 (98%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVIEDEKEN NFCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 62 LFCERIFGPIKSGICACGNYRVIEDEKENPNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 121
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 275
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 122 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152
>emb|CCQ71611.1| RNA polymerase beta' subunit (chloroplast) [Salvia miltiorrhiza]
Length = 682
Score = 192 bits (489), Expect = 3e-47
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVIEDEKEN NFCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIEDEKENPNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCD 272
HVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCD 144
>sp|P46819.2|RPOC1_SINAL RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gi|5457428|emb|CAB48413.1| RNA polymerase A beta prime
subunit [Sinapis alba]
Length = 688
Score = 191 bits (484), Expect = 1e-46
Identities = 89/100 (89%), Positives = 93/100 (93%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEK + FCEQCGVEFVDSRIRRYQMGYIKL CPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGDEKGDPKFCEQCGVEFVDSRIRRYQMGYIKLTCPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDQNYDFT 302
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV FD+N +F+
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCDVCFDRNPNFS 154
>ref|YP_009020211.1| RNA polymerase beta (chloroplast) [Castanopsis echinocarpa]
gi|589387942|gb|AHL16898.1| RNA polymerase beta
(chloroplast) [Castanopsis echinocarpa]
Length = 686
Score = 189 bits (481), Expect = 3e-46
Identities = 88/91 (96%), Positives = 89/91 (97%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ NFCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGDEKEDPNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 275
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 145
>gb|ABB90034.1| RNA polymerase beta I chain [Solanum tuberosum]
Length = 694
Score = 189 bits (479), Expect = 5e-46
Identities = 88/99 (88%), Positives = 91/99 (91%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ FCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 62 LFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVT 121
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDQNYDF 299
HVWYLKRLPSYIANLLDKPLKELEGLVYCD+ N+ F
Sbjct: 122 HVWYLKRLPSYIANLLDKPLKELEGLVYCDIESYPNFSF 160
>sp|Q2VEI5.2|RPOC1_SOLTU RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
Length = 687
Score = 189 bits (479), Expect = 5e-46
Identities = 88/99 (88%), Positives = 91/99 (91%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ FCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDQNYDF 299
HVWYLKRLPSYIANLLDKPLKELEGLVYCD+ N+ F
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCDIESYPNFSF 153
>ref|YP_008963386.1| RNA polymerase beta (chloroplast) [Sedum sarmentosum]
gi|402797521|gb|AFQ99053.1| RNA polymerase beta
(chloroplast) [Sedum sarmentosum]
Length = 145
Score = 188 bits (478), Expect = 6e-46
Identities = 86/91 (94%), Positives = 89/91 (97%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEK++L FCEQCGVEFVDSR+RRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGDEKDHLKFCEQCGVEFVDSRVRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 275
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 145
>gb|ADD31183.1| RNA polymerase beta' subunit protein [Quercus nigra]
Length = 689
Score = 188 bits (478), Expect = 6e-46
Identities = 88/93 (94%), Positives = 89/93 (95%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ NFCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 62 LFCERIFGPIKSGICACGNYRVIGDEKEDPNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 121
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV*F 281
HVWYLKRLPSYIANLLDKPLKELEGLVYCD F
Sbjct: 122 HVWYLKRLPSYIANLLDKPLKELEGLVYCDFSF 154
>ref|YP_009024784.1| RNA polymerase beta (chloroplast) [Trigonobalanus doichangensis]
gi|597710355|gb|AHN16116.1| RNA polymerase beta
(chloroplast) [Trigonobalanus doichangensis]
Length = 685
Score = 188 bits (477), Expect = 8e-46
Identities = 87/90 (96%), Positives = 88/90 (97%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ NFCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGDEKEDPNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCD 272
HVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCD 144
>ref|YP_007375034.1| RNA polymerase beta [Quercus rubra] gi|441421913|gb|AGC31237.1| RNA
polymerase beta [Quercus rubra]
Length = 685
Score = 188 bits (477), Expect = 8e-46
Identities = 87/90 (96%), Positives = 88/90 (97%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ NFCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGDEKEDPNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCD 272
HVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCD 144
>ref|YP_004021141.1| RNA polymerase beta [Castanea mollissima]
gi|309321511|gb|ADO65051.1| RNA polymerase beta
[Castanea mollissima]
Length = 685
Score = 188 bits (477), Expect = 8e-46
Identities = 87/90 (96%), Positives = 88/90 (97%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ NFCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGDEKEDPNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCD 272
HVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCD 144
>gb|ABW40754.1| RNA polymerase beta subunit [Papaver somniferum]
Length = 682
Score = 188 bits (477), Expect = 8e-46
Identities = 88/93 (94%), Positives = 89/93 (95%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ FCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV*F 281
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV F
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCDVSF 147
>gb|ABW40753.1| RNA polymerase beta subunit [Papaver somniferum]
Length = 682
Score = 188 bits (477), Expect = 8e-46
Identities = 88/93 (94%), Positives = 89/93 (95%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ FCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV*F 281
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV F
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCDVSF 147
>ref|YP_008815108.1| RNA polymerase beta (chloroplast) [Schefflera delavayi]
gi|458599515|gb|AGG39208.1| RNA polymerase beta
(chloroplast) [Schefflera delavayi]
Length = 145
Score = 187 bits (476), Expect = 1e-45
Identities = 87/91 (95%), Positives = 89/91 (97%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI +EKE+ NFCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGNEKEDPNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 275
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 145
>ref|YP_007890364.1| RNA polymerase beta' subunit (chloroplast) [Ardisia polysticta]
gi|456367961|gb|AGG36875.1| RNA polymerase beta' subunit
(chloroplast) [Ardisia polysticta]
Length = 686
Score = 187 bits (476), Expect = 1e-45
Identities = 87/91 (95%), Positives = 88/91 (96%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ FCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGDEKEDSKFCEQCGVEFVDSRIRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 275
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 145
>gb|AHH30432.1| RNA polymerase beta (chloroplast) [Bartsia inaequalis]
Length = 679
Score = 187 bits (475), Expect = 1e-45
Identities = 87/91 (95%), Positives = 88/91 (96%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ FCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 275
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 145
>ref|YP_004940501.1| rpoC1 gene product (chloroplast) [Boea hygrometrica]
gi|340549398|gb|AEK53220.1| RNA polymerase beta
(chloroplast) [Boea hygrometrica]
Length = 691
Score = 187 bits (475), Expect = 1e-45
Identities = 87/91 (95%), Positives = 88/91 (96%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ N CEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 62 LFCERIFGPIKSGICACGNYRVIGDEKEDPNLCEQCGVEFVDSRIRRYQMGYIKLACPVT 121
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 275
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 122 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152
>ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum indicum]
gi|347448286|gb|AEO92697.1| RNA polymerase beta' subunit
(chloroplast) [Sesamum indicum]
Length = 691
Score = 187 bits (475), Expect = 1e-45
Identities = 87/91 (95%), Positives = 88/91 (96%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ FCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 62 LFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVT 121
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 275
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 122 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152
>ref|YP_001294089.1| RNA polymerase beta [Chloranthus spicatus]
gi|212288280|sp|A6MMB3.1|RPOC1_CHLSC RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gi|146744179|gb|ABQ43251.1| RNA polymerase beta
[Chloranthus spicatus]
Length = 688
Score = 187 bits (475), Expect = 1e-45
Identities = 87/91 (95%), Positives = 88/91 (96%)
Frame = +3
Query: 3 LFCERIFGPIKSGICACGNYRVIEDEKENLNFCEQCGVEFVDSRIRRYQMGYIKLACPVT 182
LFCERIFGPIKSGICACGNYRVI DEKE+ FCEQCGVEFVDSRIRRYQMGYIKLACPVT
Sbjct: 55 LFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVT 114
Query: 183 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 275
HVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 115 HVWYLKRLPSYIANLLDKPLKELEGLVYCDV 145