BLASTX nr result

ID: Mentha29_contig00042653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00042653
         (292 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006402169.1| hypothetical protein EUTSA_v10015409mg, part...    58   2e-06
ref|XP_006293129.1| hypothetical protein CARUB_v10019435mg [Caps...    58   2e-06

>ref|XP_006402169.1| hypothetical protein EUTSA_v10015409mg, partial [Eutrema
           salsugineum] gi|557103259|gb|ESQ43622.1| hypothetical
           protein EUTSA_v10015409mg, partial [Eutrema salsugineum]
          Length = 367

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
 Frame = +3

Query: 18  STPND-RCFGCGELGHRRTSCPRARTTRTLLNDDA--TLLECVDDFQFDIEALPPLIEEH 188
           S PN  RCF CGE GH +T+CP+ +T R L  D+      +  DD + + ++  P  E+H
Sbjct: 135 SQPNALRCFACGEPGHLQTACPK-QTRRGLFGDETKWDKDDAADDNEDEFDSEVP--EDH 191

Query: 189 VTGDTGPLLVIQRACFTPRSADTNPQRSQIFEST 290
             GDT P L+++  C  P   +    R+ IF+ST
Sbjct: 192 HHGDTSPSLMLRHVCLAPVVLEEPWLRTNIFQST 225


>ref|XP_006293129.1| hypothetical protein CARUB_v10019435mg [Capsella rubella]
           gi|482561836|gb|EOA26027.1| hypothetical protein
           CARUB_v10019435mg [Capsella rubella]
          Length = 595

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
 Frame = +3

Query: 33  RCFGCGELGHRRTSCPRARTTRTLLNDDATLLECVDDFQFDIEALPPLIEEHVT----GD 200
           RCF CGE GHR+T+CP  +T R LL  +    E  D+ +FD E L    +EH T    GD
Sbjct: 459 RCFSCGENGHRQTACPN-QTRRGLLAQET---EFTDEPRFD-EYLSDSNQEHDTDCIGGD 513

Query: 201 TG---PLLVIQRACFTPRSADTNPQRSQIFES 287
           TG    +LV++R C  PRS   +  R+ +F S
Sbjct: 514 TGHGSQILVLRRNCLLPRSTKESWLRTSLFRS 545


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