BLASTX nr result
ID: Mentha29_contig00042046
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00042046
(447 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 100 3e-19
gb|EXB31117.1| hypothetical protein L484_004590 [Morus notabilis] 100 4e-19
gb|EXC14993.1| hypothetical protein L484_008147 [Morus notabilis] 97 2e-18
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera] 96 4e-18
gb|EXC30801.1| hypothetical protein L484_027980 [Morus notabilis] 96 5e-18
emb|CAN83735.1| hypothetical protein VITISV_000740 [Vitis vinifera] 93 4e-17
gb|EXB39670.1| hypothetical protein L484_017145 [Morus notabilis] 91 1e-16
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] 91 2e-16
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 89 8e-16
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 88 1e-15
gb|AAO73240.1| putative polyprotein [Oryza sativa Japonica Group... 72 8e-11
emb|CAN75872.1| hypothetical protein VITISV_019780 [Vitis vinifera] 71 1e-10
gb|AAD17357.1| contains similarity to retrovirus-related polypro... 71 2e-10
dbj|BAA22288.1| polyprotein [Oryza australiensis] 68 1e-09
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 68 1e-09
emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group] gi... 68 1e-09
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 68 1e-09
emb|CAN64533.1| hypothetical protein VITISV_035920 [Vitis vinifera] 67 2e-09
ref|XP_004156028.1| PREDICTED: large subunit GTPase 1 homolog [C... 67 3e-09
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 64 2e-08
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 100 bits (248), Expect = 3e-19
Identities = 44/65 (67%), Positives = 58/65 (89%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIKD 266
R+H++ KHIERK+HL+R+IVSRGDVSV KIASA+N+ADPFTKTLP + FE+HL G+++
Sbjct: 604 RNHRKGKHIERKFHLVREIVSRGDVSVEKIASANNIADPFTKTLPARSFEQHLEGMGLRE 663
Query: 265 MSHLL 251
MSHL+
Sbjct: 664 MSHLI 668
>gb|EXB31117.1| hypothetical protein L484_004590 [Morus notabilis]
Length = 86
Score = 99.8 bits (247), Expect = 4e-19
Identities = 47/64 (73%), Positives = 55/64 (85%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIKD 266
RSHK + HIERKYHLIRDIV RG+V+VLK AS +NLADPFTKTLP VF++HL FGI+D
Sbjct: 22 RSHKSANHIERKYHLIRDIVDRGNVAVLKTASENNLADPFTKTLPLNVFDRHLDGFGIRD 81
Query: 265 MSHL 254
M+HL
Sbjct: 82 MTHL 85
>gb|EXC14993.1| hypothetical protein L484_008147 [Morus notabilis]
Length = 175
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIKD 266
RSHKRSKHIERKYHLIR+IV RGDV V KI+ DNLADPFTK L GKVF HL F ++D
Sbjct: 111 RSHKRSKHIERKYHLIREIVQRGDVEVTKISIHDNLADPFTKALSGKVFVSHLEGFRMRD 170
Query: 265 MSHLL 251
+HLL
Sbjct: 171 CTHLL 175
>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
Length = 961
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/65 (66%), Positives = 56/65 (86%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIKD 266
++H++ KHIERK+HL+R+IVSRGDV V IASA+N+ADPFTKTLP + FE+HL G++D
Sbjct: 897 KNHRKGKHIERKFHLVREIVSRGDVLVENIASANNIADPFTKTLPTRSFEQHLEGMGLRD 956
Query: 265 MSHLL 251
MSHLL
Sbjct: 957 MSHLL 961
>gb|EXC30801.1| hypothetical protein L484_027980 [Morus notabilis]
Length = 225
Score = 95.9 bits (237), Expect = 5e-18
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIKD 266
R+H++ KHIERK+HL+R+IVSRGDVSV K+ASA+N+ADPF KTLP FE+HL N ++D
Sbjct: 161 RNHRKGKHIERKFHLVREIVSRGDVSVEKVASANNIADPFIKTLPAGSFERHLENMRLRD 220
Query: 265 MSHLL 251
M HLL
Sbjct: 221 MPHLL 225
>emb|CAN83735.1| hypothetical protein VITISV_000740 [Vitis vinifera]
Length = 230
Score = 92.8 bits (229), Expect = 4e-17
Identities = 41/65 (63%), Positives = 53/65 (81%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIKD 266
R+H++ KHIERK+HL+R +VSRGDVSV I A+N+ADPFTKTLP + E+HL G++D
Sbjct: 166 RNHRKGKHIERKFHLVRKVVSRGDVSVENITYANNIADPFTKTLPARSLEQHLEGMGLRD 225
Query: 265 MSHLL 251
MSHLL
Sbjct: 226 MSHLL 230
>gb|EXB39670.1| hypothetical protein L484_017145 [Morus notabilis]
Length = 139
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/64 (67%), Positives = 52/64 (81%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIKD 266
+SHK +KHIERK HLIRDIV RGDV+VL+IAS +NL +PF KTLP F +HL FGI+D
Sbjct: 75 KSHKNAKHIERKCHLIRDIVDRGDVAVLQIASENNLVNPFMKTLPLNEFNRHLEGFGIRD 134
Query: 265 MSHL 254
M+HL
Sbjct: 135 MTHL 138
>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
Length = 1544
Score = 90.5 bits (223), Expect = 2e-16
Identities = 42/59 (71%), Positives = 49/59 (83%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIK 269
RSHKR+KHIERKYHLIRDIV RGDV V+KIAS +NLADPFTK+L FE+H+ G+K
Sbjct: 1480 RSHKRAKHIERKYHLIRDIVQRGDVVVMKIASENNLADPFTKSLSSTTFERHVEGMGVK 1538
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIK 269
RSHKR+KHIERKYHLIRDIV RGD V+KIAS +NLADPFTK+L FE+H+ G+K
Sbjct: 569 RSHKRAKHIERKYHLIRDIVQRGDXVVMKIASENNLADPFTKSLSSXTFERHVEGMGVK 627
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 88.2 bits (217), Expect = 1e-15
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIK 269
RSHKR+KHI RKYHLIRDIV RGDV V+KIAS +NLADPFTK+L FE+H+ G+K
Sbjct: 1221 RSHKRAKHIXRKYHLIRDIVQRGDVVVMKIASENNLADPFTKSLSSTTFERHVEGMGVK 1279
>gb|AAO73240.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108709205|gb|ABF97000.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 146
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/76 (50%), Positives = 48/76 (63%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIKD 266
RSH++SKHI R+YHLIR+IV RGDV + KI + N+ADP TK LP E GI+
Sbjct: 71 RSHQKSKHILRRYHLIREIVGRGDVKICKIHTDLNVADPLTKPLPQPKNEAQTRAMGIRF 130
Query: 265 MSHLL*GKWEIVGIVP 218
+ L KWE V +P
Sbjct: 131 IHDWLECKWETVSDMP 146
>emb|CAN75872.1| hypothetical protein VITISV_019780 [Vitis vinifera]
Length = 788
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIKD 266
R+H+ KHI RKYH I +IV RGDV V KIAS NL DPFTKTL +VF++H + G++
Sbjct: 724 RNHQTGKHIGRKYHPICEIVRRGDVVVEKIASTKNLEDPFTKTLSTRVFDRHRDSLGVRC 783
Query: 265 MSHLL 251
+ +L
Sbjct: 784 VPSML 788
>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
thaliana] gi|7267382|emb|CAB77943.1| putative transposon
protein [Arabidopsis thaliana]
Length = 769
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIK 269
RSH++SKHI+R+YHLIR+I+ RGDV + ++++ N+ DPFTK LP E H GI+
Sbjct: 707 RSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVTDPFTKPLPQPKHESHTTVIGIR 765
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/59 (54%), Positives = 41/59 (69%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIK 269
RSH++SKHI R+YHLIR+IV RGDV + K+ + N+ADP TK LP E H GI+
Sbjct: 1255 RSHQKSKHILRRYHLIREIVDRGDVKICKVHTDLNIADPLTKPLPQPKHEAHTRAMGIR 1313
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 68.2 bits (165), Expect = 1e-09
Identities = 29/59 (49%), Positives = 43/59 (72%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIK 269
+SH++SKHI+R+YHLIR+I+ RGDV + ++++ N+AD FTK LP E H GI+
Sbjct: 902 KSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTKPLPQPKHESHTTAIGIR 960
>emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group]
gi|38347202|emb|CAD40526.2| OSJNBa0023J03.14 [Oryza
sativa Japonica Group] gi|116308930|emb|CAH66059.1|
OSIGBa0125J07.8 [Oryza sativa Indica Group]
gi|116309043|emb|CAH66155.1| OSIGBa0113B06.1 [Oryza
sativa Indica Group]
Length = 704
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/59 (55%), Positives = 41/59 (69%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIK 269
RSH++SKHI R+YHLIR+IV RGDV + KI + N+ADP TK LP E H GI+
Sbjct: 642 RSHQKSKHILRRYHLIREIVGRGDVKICKIHTDLNVADPLTKPLPQPKHEAHTRAMGIR 700
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/59 (55%), Positives = 41/59 (69%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIK 269
RSH++SKHI R+YHLIR+IV RGDV + KI + N+ADP TK LP E H GI+
Sbjct: 1122 RSHQKSKHILRQYHLIREIVGRGDVKICKIHTDLNVADPLTKPLPQPKHEAHTRAMGIR 1180
>emb|CAN64533.1| hypothetical protein VITISV_035920 [Vitis vinifera]
Length = 297
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = -3
Query: 430 SKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIKDMSHLL 251
SKHIERKYHLIR+IV + V V KI A+NLADPF KTL +VF H N G++ + ++L
Sbjct: 236 SKHIERKYHLIREIVMKVVVVVEKITFAENLADPFMKTLSTRVFNGHKDNLGVRCVPNML 295
Query: 250 *G 245
G
Sbjct: 296 LG 297
>ref|XP_004156028.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus]
Length = 361
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/53 (66%), Positives = 38/53 (71%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHL 287
RS KR KHIE KY+LI IV RGDV V KIA +N+ D FTKTL KVFE HL
Sbjct: 304 RSEKREKHIEWKYYLIWKIVQRGDVIVSKIALENNIVDSFTKTLTTKVFEGHL 356
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -3
Query: 445 RSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHLLNFGIK 269
RSH++SKHI R+YHLIR++V RGDV + K+ + N+ADP TK L E H GI+
Sbjct: 835 RSHQKSKHILRRYHLIRELVDRGDVKICKVHTDLNIADPLTKPLTQPKHEAHTRAIGIR 893