BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00041861
         (302 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42535.1| hypothetical protein MIMGU_mgv1a019040mg [Mimulus...   147   2e-33
ref|XP_006345185.1| PREDICTED: pentatricopeptide repeat-containi...   137   2e-30
ref|XP_004236513.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containi...   132   4e-29
gb|EXC31176.1| hypothetical protein L484_004942 [Morus notabilis]     119   3e-25
gb|EPS59463.1| hypothetical protein M569_15345, partial [Genlise...   119   4e-25
ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
emb|CBI15077.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_006838872.1| hypothetical protein AMTR_s00002p00267080 [A...    94   2e-17
ref|XP_006847522.1| hypothetical protein AMTR_s00014p00090010 [A...    93   4e-17
ref|NP_174428.1| pentatricopeptide repeat-containing protein [Ar...    92   6e-17
ref|XP_002891146.1| pentatricopeptide repeat-containing protein ...    92   6e-17
ref|XP_006304931.1| hypothetical protein CARUB_v10011411mg [Caps...    90   4e-16
ref|XP_004308509.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
ref|XP_006415328.1| hypothetical protein EUTSA_v10007222mg [Eutr...    89   6e-16
ref|XP_004289369.1| PREDICTED: pentatricopeptide repeat-containi...    89   8e-16
gb|AEP33764.1| organelle transcript processing 82, partial [Iber...    88   1e-15
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha...    87   2e-15
gb|EXB65077.1| hypothetical protein L484_004253 [Morus notabilis]      87   2e-15

>gb|EYU42535.1| hypothetical protein MIMGU_mgv1a019040mg [Mimulus guttatus]
          Length = 514

 Score =  147 bits (371), Expect = 2e-33
 Identities = 69/100 (69%), Positives = 82/100 (82%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           KPD Y+ TFV++S +R++SVV GQ+VHGM VKNG   NLYVANSLI MYA FARVDDAC+
Sbjct: 7   KPDKYSFTFVISSSARRSSVVHGQIVHGMVVKNGYLQNLYVANSLISMYAVFARVDDACK 66

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           VF+EMP+R VFSWTSLV AY KNG M RA  +F +MP+RN
Sbjct: 67  VFEEMPDRDVFSWTSLVGAYTKNGNMQRASNIFWEMPLRN 106


>ref|XP_006345185.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 547

 Score =  137 bits (344), Expect = 2e-30
 Identities = 61/99 (61%), Positives = 77/99 (77%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           PD+YT TF++TSC+ Q S+V G++VHG+ V+NG   NLYV NSLI MY+ F   DDA +V
Sbjct: 132 PDEYTFTFIVTSCAHQKSIVHGKIVHGLVVRNGLESNLYVGNSLINMYSVFKITDDAYKV 191

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           FD + ER VFSWTSL+  YA NGEM++ACE+F KMPVRN
Sbjct: 192 FDRITERDVFSWTSLICGYANNGEMYQACEIFYKMPVRN 230


>ref|XP_004236513.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 618

 Score =  134 bits (337), Expect = 1e-29
 Identities = 60/99 (60%), Positives = 76/99 (76%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           PD+YT TF++TSC+ Q S V G++VHG+ V+NG   NLYV NSLI MY+ F   DDA +V
Sbjct: 143 PDEYTFTFIVTSCAHQKSFVHGKIVHGLVVRNGLESNLYVGNSLINMYSVFKITDDAYKV 202

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           FD + +R VFSWTSL+  YA NGEM++ACE+F KMPVRN
Sbjct: 203 FDRIADRDVFSWTSLICGYANNGEMYQACEIFYKMPVRN 241


>ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 684

 Score =  132 bits (333), Expect = 4e-29
 Identities = 62/99 (62%), Positives = 79/99 (79%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           PD+YT TFV+TSCS Q S++ G++VHGM VK+G   NLYV NS+I M + FAR++DA +V
Sbjct: 176 PDEYTFTFVITSCSHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKV 235

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           F++M ER VFSWTSL+  YAK+GEM RACE+F  MPVRN
Sbjct: 236 FNQMSERDVFSWTSLLGGYAKHGEMDRACELFNMMPVRN 274


>gb|EXC31176.1| hypothetical protein L484_004942 [Morus notabilis]
          Length = 660

 Score =  119 bits (299), Expect = 3e-25
 Identities = 57/99 (57%), Positives = 72/99 (72%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           PD YT TFV+TSCS QNS+  G+VVHGMAVKNG  L+L+V NS+I +YA FAR +DA +V
Sbjct: 149 PDKYTFTFVITSCSHQNSMHCGEVVHGMAVKNGLELDLFVGNSVINVYAFFARWEDAQKV 208

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           FD MPER  F+WT L+  Y + GE+  A  +F   P+RN
Sbjct: 209 FDGMPERDAFTWTGLLRGYTRGGEIDEAFRLFDGRPIRN 247



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/100 (33%), Positives = 53/100 (53%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           KPD+  L  VL++C+   ++  G  +HG    N    +  +  +LI MYA   R+D A +
Sbjct: 281 KPDEVILVSVLSACAHLGALHQGNWIHGYINGNRIKFSSSIITALIDMYAKCGRIDRAKQ 340

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           VF     R VF++TS+V+  + +G    A +VF +M   N
Sbjct: 341 VFHAASRRDVFNYTSMVNGLSLHGLGKEALQVFSQMLEEN 380


>gb|EPS59463.1| hypothetical protein M569_15345, partial [Genlisea aurea]
          Length = 433

 Score =  119 bits (298), Expect = 4e-25
 Identities = 57/99 (57%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
 Frame = -3

Query: 294 DDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEVF 115
           D+YT   VLTSC+ Q  V SG+ VHGMA++NG   NLYV NSLI +Y AF   D+A +VF
Sbjct: 102 DEYTFNSVLTSCAHQQDVESGRAVHGMAMRNGFSSNLYVGNSLISVYGAFGLGDEAHKVF 161

Query: 114 DEMPERGVFSWTSLVSAYAKNGE-MWRACEVFGKMPVRN 1
           DEM  R +FSWTSL+ A+++NG+ M +ACE+FG+MP+RN
Sbjct: 162 DEMSGRDIFSWTSLIRAHSQNGKNMEKACEIFGQMPLRN 200


>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  104 bits (259), Expect = 1e-20
 Identities = 52/99 (52%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
 Frame = -3

Query: 294 DDYTLTFVLTSCSRQNSVVS-GQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           D YT TFV T+CSR  ++   G+ VHGM VK+G   +++V NSL+ MY+ F+R+ DA  V
Sbjct: 155 DKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRV 214

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           FDEMP+R V +WTS+V  YA  GE+ RA E+F  MP RN
Sbjct: 215 FDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRN 253



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/84 (32%), Positives = 50/84 (59%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           KP++  L  +L++C+   ++  G+ +H    KN   L+  ++ +LI MYA   R+D A  
Sbjct: 287 KPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARR 346

Query: 120 VFDEMPERGVFSWTSLVSAYAKNG 49
           VFD + +R + +WTS++S  + +G
Sbjct: 347 VFDGLHKRDLLTWTSMISGLSMHG 370


>emb|CBI15077.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  100 bits (249), Expect = 2e-19
 Identities = 52/93 (55%), Positives = 66/93 (70%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           KPDD TL  VL  CS  + +V  ++VHGM VK+G   NLYV NS+I M + FAR++DA +
Sbjct: 358 KPDDITLLGVLNGCSH-SGLVEEEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARK 416

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVF 22
           VF++M ER VFSWTSL+  YAK+GEM RA   F
Sbjct: 417 VFNQMSERDVFSWTSLLGGYAKHGEMDRASLTF 449



 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
 Frame = -3

Query: 294 DDYTLTFVLTSCSRQNSVVS-GQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           D YT TFV T+CSR  ++   G+ VHGM VK+G   +++V NSL+ MY+ F+R+ DA  V
Sbjct: 155 DKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRV 214

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMW-RACEVFGKM 13
           FDEMP+R V +WTS+V  YA  GE +  A + F  M
Sbjct: 215 FDEMPQRDVITWTSVVKGYAMRGEFYNEALQCFNDM 250



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/84 (32%), Positives = 50/84 (59%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           KP++  L  +L++C+   ++  G+ +H    KN   L+  ++ +LI MYA   R+D A  
Sbjct: 257 KPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARR 316

Query: 120 VFDEMPERGVFSWTSLVSAYAKNG 49
           VFD + +R + +WTS++S  + +G
Sbjct: 317 VFDGLHKRDLLTWTSMISGLSMHG 340


>ref|XP_006838872.1| hypothetical protein AMTR_s00002p00267080 [Amborella trichopoda]
           gi|548841378|gb|ERN01441.1| hypothetical protein
           AMTR_s00002p00267080 [Amborella trichopoda]
          Length = 275

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 43/98 (43%), Positives = 61/98 (62%)
 Frame = -3

Query: 294 DDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEVF 115
           D +  TF+L +CSR  S   G  +HG AVK G   +LY+ N+L+  YA+F  VDDA +VF
Sbjct: 140 DHHAPTFLLKACSRMGSATLGHAIHGRAVKTGLESDLYIGNALVHAYASFGEVDDANKVF 199

Query: 114 DEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           DEMP R + SW +L++ Y +N +   A + F KM + N
Sbjct: 200 DEMPMRDMVSWNALINGYVENAQFREAFQQFSKMGLEN 237


>ref|XP_006847522.1| hypothetical protein AMTR_s00014p00090010 [Amborella trichopoda]
           gi|548850756|gb|ERN09103.1| hypothetical protein
           AMTR_s00014p00090010 [Amborella trichopoda]
          Length = 845

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 44/99 (44%), Positives = 69/99 (69%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           PD++T++ VLT  +  N++  G+ +HG  VK G  L++ V+NSLI MY+  A +DDA  V
Sbjct: 128 PDEFTVSNVLTISANLNALEEGKQIHGFIVKKGFVLDVTVSNSLINMYSKCACMDDAERV 187

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           F+ + +R V+SWT++VS YA+NG+   A ++F +MP RN
Sbjct: 188 FEAITQRDVYSWTAMVSGYAQNGKTEAAMKLFNEMPQRN 226



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/100 (37%), Positives = 59/100 (59%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           +P+++TL+ +L SCS +N    G  +HG A+K G  +++ + N L+ MY     +++A  
Sbjct: 390 RPNEHTLSSLLNSCSGKNKTGFG--LHGFAIKMGFEVDISIGNCLVTMYGEQRCMNNAYM 447

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           VF  MP   V SWT++VSAY  N  +  A + F  MP +N
Sbjct: 448 VFQSMPRHDVVSWTAMVSAYLTNQRIEEARQTFESMPQQN 487



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/100 (32%), Positives = 56/100 (56%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           KP+  +   VL +C+   ++ +G+ +    +K+GT  + +V  ++I M+A F  +  A +
Sbjct: 259 KPNQSSFVSVLKACAGLQTIETGKQIQSYLIKSGTEADAHVGTAIIEMHAKFGDIISAHK 318

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
            F E  E  V SW+ LV AY +NG +  A  +F +MP +N
Sbjct: 319 SF-EASEHNVVSWSVLVGAYTQNGYITEAASLFQEMPKKN 357



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/96 (25%), Positives = 50/96 (52%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           +PD++T    LT+C+   ++     +H + +      +  V N+L+  Y+    + +A +
Sbjct: 542 RPDNFTYNCALTACAAIGALHQASTIHAITIHRAYDSDKGVTNALMAAYSKCGSLQNAEQ 601

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
           +F+ + E    SW +L++ YA+NG+     E F +M
Sbjct: 602 IFNNLEEPDTISWNTLITGYAQNGQGNHVLEFFNEM 637


>ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g31430 gi|12322531|gb|AAG51260.1|AC027135_1
           PPR-repeat protein [Arabidopsis thaliana]
           gi|332193234|gb|AEE31355.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 570

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 45/95 (47%), Positives = 61/95 (64%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           PD++TL  VL S  R   V+ G+ VHG AVK G   + YV+NSL+GMYA+  +++   +V
Sbjct: 44  PDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKV 103

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
           FDEMP+R V SW  L+S+Y  NG    A  VF +M
Sbjct: 104 FDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRM 138



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/96 (34%), Positives = 56/96 (58%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           +PD++ L  +LT C++  ++  G+ +HG   +N   ++  V  +L+ MYA    ++ A E
Sbjct: 276 RPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALE 335

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
           VF E+ ER   SWTSL+   A NG   RA +++ +M
Sbjct: 336 VFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM 371


>ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336988|gb|EFH67405.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 554

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 46/95 (48%), Positives = 60/95 (63%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           PD++TL  VL S  R   V+ G+ VHG AVK G   + YV NSL+GMYAA  +++   +V
Sbjct: 28  PDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCNSLMGMYAALGKMEITHKV 87

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
           FDEMPER V SW  L+S+Y  +G    A  VF +M
Sbjct: 88  FDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRM 122



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 33/96 (34%), Positives = 55/96 (57%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           +PD++ L  +LT C++  ++  G+ +HG   +N   ++  V  +L+ MYA    ++ A  
Sbjct: 260 RPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALG 319

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
           VF EM ER   SWTSL+   A NG   RA +++ +M
Sbjct: 320 VFYEMKERDTASWTSLIYGLATNGMSGRALDLYYEM 355



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/100 (30%), Positives = 54/100 (54%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           K D+ T+   L++CS   ++  G+ ++   V     +++   N+L+ M+     +D A  
Sbjct: 129 KADEGTIVSTLSACSVLKNLEIGERIYRYVVTEFE-MSVRTGNALVDMFCKCGCLDKARA 187

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           +FD M ++ V  WTS+VS Y  NG    A E+F + PV++
Sbjct: 188 IFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKD 227


>ref|XP_006304931.1| hypothetical protein CARUB_v10011411mg [Capsella rubella]
           gi|482573642|gb|EOA37829.1| hypothetical protein
           CARUB_v10011411mg [Capsella rubella]
          Length = 570

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 45/95 (47%), Positives = 59/95 (62%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           PD +TL  VL S  R   V  G+ VHG AVK G   + YV+NSL+GMYAA  +++   +V
Sbjct: 44  PDSFTLPVVLKSIGRLRKVPEGEKVHGYAVKAGLEFDSYVSNSLMGMYAALGKIEITHKV 103

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
           FDEMP+R V SW  L+S+Y  +G    A  VF +M
Sbjct: 104 FDEMPQRDVVSWNGLISSYVGHGRFEDAIAVFKRM 138



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 33/96 (34%), Positives = 56/96 (58%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           +PD++ L  +LT C++  ++  G+ +HG   +N   ++  V  +L+ MYA    ++ A E
Sbjct: 276 RPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALE 335

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
           +F EM ER   SWTSL+   A NG   RA +++ +M
Sbjct: 336 IFYEMKERDTTSWTSLIYGLAMNGMSGRALDLYYEM 371



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/100 (33%), Positives = 57/100 (57%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           K D+ T+   L++CS   ++  G+ +H   V     +++ + N+L+ M+    R+D A  
Sbjct: 145 KADEGTIVSTLSACSVLKNLEIGERIHKYVVTEFE-MSVKIGNALVDMFCKCGRLDKARA 203

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           VFD M ++ V  WTS+VS Y  NG +  A E+F + PV++
Sbjct: 204 VFDSMRDKNVKCWTSMVSGYVSNGRIDEARELFERSPVKD 243


>ref|XP_004308509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Fragaria vesca subsp. vesca]
          Length = 563

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 43/100 (43%), Positives = 62/100 (62%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           +PD YT T +  SC    + + G+V+H  AVK G  L+LYV+ + + MY  F R+  A +
Sbjct: 76  EPDGYTFTALAKSCGLDGARLEGEVIHCHAVKTGLCLDLYVSTAFVDMYVKFGRIGCARK 135

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           VFDEM ER   SWT+L+  YA+ G+M  A  +F +MP R+
Sbjct: 136 VFDEMTERNRVSWTALICGYARAGDMGGARRLFDEMPERD 175



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKN--GTFLNLYVANSLIGMYAAFARVDDA 127
           +PD  T+  +L + +   ++  G  VH    +       N+Y A  L+ MYA    +  A
Sbjct: 271 EPDAVTIVSILPAIADLGALDLGHWVHEFVERKKLDKLTNIYTA--LVDMYAKCGEITKA 328

Query: 126 CEVFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
            ++FDEMPE+   SW +L++ +A NG    A EVF +M
Sbjct: 329 RKLFDEMPEKETASWNALINGFAVNGHGKEALEVFSEM 366


>ref|XP_006415328.1| hypothetical protein EUTSA_v10007222mg [Eutrema salsugineum]
           gi|557093099|gb|ESQ33681.1| hypothetical protein
           EUTSA_v10007222mg [Eutrema salsugineum]
          Length = 569

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 44/95 (46%), Positives = 60/95 (63%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           PD++TL  VL S  R   V+ G+ VHG A+K G   + YV NSL+GMYA+  +++   +V
Sbjct: 44  PDNFTLPVVLKSIGRLRKVLEGEKVHGYAMKAGLEFDSYVCNSLMGMYASLGKMEITHKV 103

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
           FDEMPER V SW  L+S+Y  +G    A  VF +M
Sbjct: 104 FDEMPERDVVSWNGLISSYVGHGRFEDAIAVFKRM 138



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/96 (34%), Positives = 52/96 (54%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           K D++ L  +L  C +  ++  G+ +HG   +N   ++  V  +L+ MYA    ++ A E
Sbjct: 276 KLDNFVLVSLLKGCGQTGALEQGKWIHGYIYENRVAVDKVVGTALVDMYAKCGCIETALE 335

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
           VF E  ER   SWTSL+   A NG   RA E++ +M
Sbjct: 336 VFYETKERDTASWTSLIYGLAMNGMSRRALELYYEM 371



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/100 (31%), Positives = 55/100 (55%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           KPD+ T+   L++CS   ++  G+ +H   V     +++ + N+L+ M+     +D A  
Sbjct: 145 KPDEGTIVSTLSACSALKNLDIGEGIHRYVVTEFE-MSVKIGNALVDMFCKCGCLDKARV 203

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           VFD +  + V  WTS+VS Y  NG +    E+F + PV++
Sbjct: 204 VFDSVRSKNVKCWTSMVSGYVSNGRIDEGRELFERSPVKD 243


>ref|XP_004289369.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Fragaria vesca subsp. vesca]
          Length = 733

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 43/100 (43%), Positives = 68/100 (68%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           +PD YT++  +T+C++   VV G  +HG AV++G     +VAN L+ +YA+   +DD   
Sbjct: 53  RPDHYTVSAAITACAKLRHVVFGTQLHGNAVRSGLKAFPHVANPLLSLYASAGDLDDVRL 112

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           VFDE+ E  V++WT+L+SA AK GE+  AC+VF K+P ++
Sbjct: 113 VFDEIAEPDVYAWTTLLSACAKLGEVEYACKVFDKIPEKS 152



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 36/95 (37%), Positives = 57/95 (60%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           PD YTL+ +L+ C+   S+  G+ VH   +K G    L + N+LI MYA    +D +  V
Sbjct: 485 PDVYTLSIILSMCASITSLRDGKPVHAYILKFGFSQQLCLGNALITMYAKCGVLDWSVRV 544

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
           F+ M E+ + SW +L+SAYA++G+  +A + F  M
Sbjct: 545 FEAMNEKDIVSWNALISAYAQHGKGKKAVDCFEAM 579


>gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 42/99 (42%), Positives = 63/99 (63%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           P+ YT  F+L SC++  +   GQ +HG  +K G  L+LYV  SLI MY    R++DA +V
Sbjct: 89  PNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 148

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           FDE P R V S+T+L+  YA  G +  A ++F ++PV++
Sbjct: 149 FDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKD 187



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/96 (29%), Positives = 53/96 (55%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           +PD+ T+  V+++C++  S+  G+ VH     +G   NL + N+LI +Y+    ++ AC 
Sbjct: 220 RPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACG 279

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
           +F+ +P + V SW +L+  Y        A  +F +M
Sbjct: 280 LFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 315


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 43/99 (43%), Positives = 61/99 (61%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           PD YT TF L SC   + V  G+ +HG  +K G   +L++ N+LI +YA+   ++DA  +
Sbjct: 106 PDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHL 165

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
            D M ER V SW +L+SAYA+ G M  AC +F +M  RN
Sbjct: 166 LDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTERN 204



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 31/98 (31%), Positives = 57/98 (58%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           KPD+ TL  VL++C+   ++  G+ VH    KNG  ++ +VA +L+ MY+    ++ A E
Sbjct: 268 KPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALE 327

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPV 7
           VF+    + + +W S++S  + +G    A ++F +M V
Sbjct: 328 VFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLV 365


>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
           gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
           [Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
           chloroplast RNA editing factor [Arabidopsis thaliana]
          Length = 741

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 42/99 (42%), Positives = 63/99 (63%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           P+ YT  FVL SC++  +   GQ +HG  +K G  L+LYV  SLI MY    R++DA +V
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           FD+ P R V S+T+L+  YA  G +  A ++F ++PV++
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKD 230



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/96 (29%), Positives = 53/96 (55%)
 Frame = -3

Query: 300 KPDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACE 121
           +PD+ T+  V+++C++  S+  G+ VH     +G   NL + N+LI +Y+    ++ AC 
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 322

Query: 120 VFDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKM 13
           +F+ +P + V SW +L+  Y        A  +F +M
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358


>gb|EXB65077.1| hypothetical protein L484_004253 [Morus notabilis]
          Length = 508

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/99 (44%), Positives = 60/99 (60%)
 Frame = -3

Query: 297 PDDYTLTFVLTSCSRQNSVVSGQVVHGMAVKNGTFLNLYVANSLIGMYAAFARVDDACEV 118
           PD+YTL +VL +CSR  S   G  VHG  +K+G   +L+V NSLI MY+ F  ++ A +V
Sbjct: 87  PDNYTLPYVLKACSRLQSACLGVSVHGHGLKSGLAFDLFVGNSLIVMYSEFRNMEAARQV 146

Query: 117 FDEMPERGVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN 1
           FDEMP     SW  ++S Y K GE+ +    F   PVR+
Sbjct: 147 FDEMPSLSTVSWMVMISGYGKVGEVDKERLFFDLAPVRD 185