BLASTX nr result
ID: Mentha29_contig00041653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00041653
(434 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 135 6e-40
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 125 3e-36
ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261... 119 2e-33
ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256... 112 2e-32
ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668... 115 3e-31
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 104 9e-31
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 118 1e-30
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 116 4e-30
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 112 7e-30
gb|ABA98898.1| retrotransposon protein, putative, unclassified [... 116 3e-29
gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japo... 116 3e-29
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 113 8e-29
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 108 8e-29
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 108 8e-29
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659... 115 1e-28
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 108 2e-28
gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japo... 115 4e-28
ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group] g... 115 7e-28
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 114 9e-28
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 105 9e-28
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 135 bits (341), Expect(2) = 6e-40
Identities = 66/115 (57%), Positives = 87/115 (75%), Gaps = 4/115 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
APGIDGYN +FF SWN+IG+ VI A+ FF TG +P IN +TL+PK N SV+ F
Sbjct: 138 APGIDGYNVHFFKCSWNIIGDSVIDAILDFFKTGFMPKIINCTYMTLLPKEVNVTSVKNF 197
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIKA 101
RPIA C+++YKIISKIL +R++GVL+S++ +QSAFV GR NII+SHEL+K+
Sbjct: 198 RPIACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKS 252
Score = 54.3 bits (129), Expect(2) = 6e-40
Identities = 20/34 (58%), Positives = 30/34 (88%)
Frame = -1
Query: 104 SYNRKQTSPRCMIKVDIQKAYDSVEWSFVRQMLV 3
SY+RK SPRCM+K+D+QKAY+SVEW F++ +++
Sbjct: 252 SYSRKGISPRCMVKIDLQKAYNSVEWPFIKHLML 285
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 125 bits (313), Expect(2) = 3e-36
Identities = 57/117 (48%), Positives = 84/117 (71%), Gaps = 4/117 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
APG+DG+NAYFF KSW I +E+ +Q+FF + IN ++TL+PK ++A V+EF
Sbjct: 455 APGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEF 514
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIKAIT 95
RPIA CT++YKIISK+L NR+KG++ ++ +QS F+PGR NI+++ ELI+ T
Sbjct: 515 RPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYT 571
Score = 52.8 bits (125), Expect(2) = 3e-36
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
Y RK SPRC++KVDI+KAYDSVEWSF+ +L
Sbjct: 570 YTRKHMSPRCIMKVDIRKAYDSVEWSFLETLL 601
>ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261795 [Solanum
lycopersicum]
Length = 413
Score = 119 bits (298), Expect(2) = 2e-33
Identities = 59/117 (50%), Positives = 81/117 (69%), Gaps = 4/117 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
APGIDGYNA FF +W +I ++VI AV+ FF TG L N L++LIPK + +V+E+
Sbjct: 256 APGIDGYNALFFKHTWKIIKKDVIEAVKNFFTTGKLFKPFNCTLVSLIPKVQCPKTVKEY 315
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIKAIT 95
PIA CT+LYKIISK++ R+ V+ +I SQ+ F+PGR NII++HEL+K T
Sbjct: 316 TPIACCTVLYKIISKVITRRMHDVIHDVICESQAGFIPGRKIADNIILAHELVKTYT 372
Score = 48.9 bits (115), Expect(2) = 2e-33
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = -1
Query: 104 SYNRKQTSPRCMIKVDIQKAYDSVEWSFVRQMLV 3
+Y RK SPR ++K+D+ KAYDSVEW F+ Q++V
Sbjct: 370 TYTRKNISPRIILKIDLHKAYDSVEWPFLEQVMV 403
>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
lycopersicum]
Length = 421
Score = 112 bits (279), Expect(2) = 2e-32
Identities = 54/117 (46%), Positives = 79/117 (67%), Gaps = 4/117 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
APGIDGYNA+FF +W +I ++I VQ FF G L N L++LIPK ++ +V+E+
Sbjct: 123 APGIDGYNAFFFKYTWKIIKNDIIEVVQSFFKPGKLFKPFNCTLVSLIPKVQSPKNVKEY 182
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIKAIT 95
R I CT+LYKIISK++ NR+ V+ ++I SQ F+ GR NI+++HEL+ + T
Sbjct: 183 RTITCCTVLYKIISKVITNRMHDVIHNVICDSQVGFILGRKISENILLAHELVNSYT 239
Score = 52.8 bits (125), Expect(2) = 2e-32
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = -1
Query: 104 SYNRKQTSPRCMIKVDIQKAYDSVEWSFVRQMLV 3
SY RK SPR M+K+D+QK YDSVEW F++Q++V
Sbjct: 237 SYTRKNISPRSMLKIDLQKVYDSVEWPFLKQVMV 270
>ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max]
Length = 603
Score = 115 bits (288), Expect(2) = 3e-31
Identities = 55/120 (45%), Positives = 81/120 (67%), Gaps = 4/120 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
APG DG+N FF K+WN+IG+++ AV +FF TG + ++N A++ LIPK A V F
Sbjct: 278 APGPDGFNVLFFKKAWNIIGDDIFEAVNEFFTTGKILKQLNHAIIALIPKHDQASQVNHF 337
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIKAITGSR 86
RPI+ C +LYKI+SKILANR+ VL++IIG +Q+AF+ + NI + E+++ R
Sbjct: 338 RPISCCNLLYKIVSKILANRIAPVLETIIGETQTAFIKNKKMMDNIFLIQEILRKYAWKR 397
Score = 45.4 bits (106), Expect(2) = 3e-31
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
Y K++SPRC++K+D+ KAYDS+ W F+ ML
Sbjct: 393 YAWKRSSPRCLLKIDLHKAYDSISWEFLDWML 424
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 104 bits (260), Expect(2) = 9e-31
Identities = 51/114 (44%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
APG+DG+N+ FF KSW VI +E+ + FF G + IN +TLIPK A +++
Sbjct: 458 APGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDY 517
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVP----GRNIIISHELIK 104
RPIA C+ LYKIISKIL RL+ V+ ++ +Q+ F+P G NI+++ ELI+
Sbjct: 518 RPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIR 571
Score = 54.7 bits (130), Expect(2) = 9e-31
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
YNR+ SPRC+IKVDI+KAYDSVEW F+ ML
Sbjct: 573 YNRRHVSPRCVIKVDIRKAYDSVEWVFLESML 604
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 118 bits (295), Expect(2) = 1e-30
Identities = 58/114 (50%), Positives = 79/114 (69%), Gaps = 4/114 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
+PG DGY + F+ SW +IG+EVI A+Q FF G LP +N +L LIPK K A ++++
Sbjct: 191 SPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDY 250
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIK 104
RPI+ C +LYK ISKILANRLK +L I G+QSAFV R N++++ EL+K
Sbjct: 251 RPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVK 304
Score = 40.8 bits (94), Expect(2) = 1e-30
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
Y++ S RC +K+DI KA+DS++WSF+ +L
Sbjct: 306 YHKDSISTRCAMKIDISKAFDSLQWSFLTHVL 337
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 116 bits (291), Expect(2) = 4e-30
Identities = 58/114 (50%), Positives = 79/114 (69%), Gaps = 4/114 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
+PG DGY A F+ +WN+IG E I A+Q FF G LP IN +L LIPK K A ++++
Sbjct: 358 SPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDY 417
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIK 104
RPI+ C +LYK+ISKI+ANRLK VL I G+QSAFV R N++++ E++K
Sbjct: 418 RPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVK 471
Score = 40.4 bits (93), Expect(2) = 4e-30
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
Y++ S RC +K+DI KA+DSV+W F+ +L
Sbjct: 473 YHKDSVSSRCALKIDISKAFDSVQWKFLINVL 504
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 112 bits (281), Expect(2) = 7e-30
Identities = 53/114 (46%), Positives = 80/114 (70%), Gaps = 4/114 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
+PG DGY + F+ ++W++IG E + AV+ FF G LP +N +L LIPK A ++++
Sbjct: 885 SPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTTILALIPKKLEAKEMKDY 944
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIK 104
RPI+ C ++YK+ISKI+ANRLK VL + I G+QSAFV R N++++ EL+K
Sbjct: 945 RPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLLATELVK 998
Score = 43.5 bits (101), Expect(2) = 7e-30
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
Y++ S RC IK+DI KA+DSV+WSF++ +L
Sbjct: 1000 YHKDTISGRCAIKIDISKAFDSVQWSFLKNVL 1031
>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1188
Score = 116 bits (291), Expect(2) = 3e-29
Identities = 54/122 (44%), Positives = 84/122 (68%), Gaps = 4/122 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
APG DG+ A FF ++W ++ EEV++AV++FF TG++P+ +N + LIPK +R++
Sbjct: 309 APGPDGFPARFFQRNWGLLKEEVVKAVKEFFNTGVMPAGVNETAIVLIPKVDQPIELRDY 368
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIKAITGSR 86
RPI+ C +LYK++SK L NRL+ +LD +I +QSAFVPGR N +I+ E +I ++
Sbjct: 369 RPISLCNVLYKVVSKCLVNRLRPILDELISPNQSAFVPGRMITDNALIAFECFHSIQKNK 428
Query: 85 HL 80
L
Sbjct: 429 KL 430
Score = 37.7 bits (86), Expect(2) = 3e-29
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 98 NRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
N+K +S C K+D+ KAYD V+W F+ Q +
Sbjct: 427 NKKLSSATCAYKLDLSKAYDRVDWKFLEQSM 457
>gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japonica Group]
Length = 787
Score = 116 bits (291), Expect(2) = 3e-29
Identities = 54/122 (44%), Positives = 84/122 (68%), Gaps = 4/122 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
APG DG+ A FF ++W ++ EEV++AV++FF TG++P+ +N + LIPK +R++
Sbjct: 309 APGPDGFPARFFQRNWGLLKEEVVKAVKEFFNTGVMPAGVNETAIVLIPKVDQPIELRDY 368
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIKAITGSR 86
RPI+ C +LYK++SK L NRL+ +LD +I +QSAFVPGR N +I+ E +I ++
Sbjct: 369 RPISLCNVLYKVVSKCLVNRLRPILDELISPNQSAFVPGRMITDNALIAFECFHSIQKNK 428
Query: 85 HL 80
L
Sbjct: 429 KL 430
Score = 37.7 bits (86), Expect(2) = 3e-29
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 98 NRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
N+K +S C K+D+ KAYD V+W F+ Q +
Sbjct: 427 NKKLSSATCAYKLDLSKAYDRVDWKFLEQSM 457
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 113 bits (283), Expect(2) = 8e-29
Identities = 57/114 (50%), Positives = 77/114 (67%), Gaps = 4/114 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
+PG DGY + FF +W +IG+E AVQ FF G LP IN +L LIPK A ++++
Sbjct: 470 SPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDY 529
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIK 104
RPI+ C +LYK+ISKI+ANRLK VL I G+QSAFV R N++++ EL+K
Sbjct: 530 RPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVK 583
Score = 39.3 bits (90), Expect(2) = 8e-29
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSVEWSFV 18
Y++ S RC IK+DI KA+DSV+W F+
Sbjct: 585 YHKDTISTRCAIKIDISKAFDSVQWPFL 612
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 108 bits (271), Expect(2) = 8e-29
Identities = 52/111 (46%), Positives = 78/111 (70%), Gaps = 4/111 (3%)
Frame = -2
Query: 427 GIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREFRP 248
G DGY+ FF +W++IG EV+ A+ +FF +G L + N L LIPK NA ++ EFRP
Sbjct: 326 GPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRP 385
Query: 247 IA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELI 107
I+ LYK+ISK+L +RL+G+L ++IG SQSAF+PGR N++++ E++
Sbjct: 386 ISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMV 436
Score = 43.9 bits (102), Expect(2) = 8e-29
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
YNR SPR M+KVD++KA+DSV+W FV L
Sbjct: 439 YNRLNISPRGMLKVDLKKAFDSVKWEFVTAAL 470
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 108 bits (271), Expect(2) = 8e-29
Identities = 52/111 (46%), Positives = 78/111 (70%), Gaps = 4/111 (3%)
Frame = -2
Query: 427 GIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREFRP 248
G DGY+ FF +W++IG EV+ A+ +FF +G L + N L LIPK NA ++ EFRP
Sbjct: 326 GPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRP 385
Query: 247 IA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELI 107
I+ LYK+ISK+L +RL+G+L ++IG SQSAF+PGR N++++ E++
Sbjct: 386 ISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMV 436
Score = 43.9 bits (102), Expect(2) = 8e-29
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
YNR SPR M+KVD++KA+DSV+W FV L
Sbjct: 439 YNRLNISPRGMLKVDLKKAFDSVKWEFVTAAL 470
>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
Length = 964
Score = 115 bits (289), Expect(2) = 1e-28
Identities = 55/120 (45%), Positives = 81/120 (67%), Gaps = 4/120 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
APG DG+N FF K+WN++G+++ AV +FF TG + ++N A++ LIPK A V F
Sbjct: 826 APGPDGFNVLFFKKAWNIVGDDIFAAVNEFFTTGKILKQLNHAIIVLIPKHDQASQVNHF 885
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIKAITGSR 86
RPI+ C +LYKI+SKILANR+ VL++IIG +Q+AF+ R NI + E+++ R
Sbjct: 886 RPISCCNLLYKIVSKILANRIAPVLETIIGETQTAFIKNRKMMDNIFLVQEILRKYARKR 945
Score = 36.6 bits (83), Expect(2) = 1e-28
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSV 33
Y RK+ SPRC++K+D+ KAYD +
Sbjct: 941 YARKRPSPRCLLKIDLHKAYDFI 963
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 108 bits (271), Expect(2) = 2e-28
Identities = 54/114 (47%), Positives = 77/114 (67%), Gaps = 4/114 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
+PG DGY + FF +W++ G + I A+Q FF G LP +N +L LIPK A ++++
Sbjct: 767 SPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDY 826
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIK 104
RPI+ C +LYK+ISKILANRLK +L S I +QSAFV R N++++ EL+K
Sbjct: 827 RPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVK 880
Score = 42.4 bits (98), Expect(2) = 2e-28
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
Y+++ +PRC +K+DI KA+DSV+W F+ L
Sbjct: 882 YHKESVTPRCAMKIDISKAFDSVQWQFLLNTL 913
>gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japonica Group]
Length = 469
Score = 115 bits (288), Expect(2) = 4e-28
Identities = 51/102 (50%), Positives = 73/102 (71%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
APG DG+ A F+ ++W +I +V+RAV++FF TG++P IN + LIPK ++EF
Sbjct: 128 APGPDGFPARFYQRNWGLIKSDVVRAVKEFFHTGIMPDGINATAIVLIPKVNQPMELKEF 187
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGRNI 128
RPI+ C ++YKI+SK L NRL+ +LD +I +QSAFVPGR I
Sbjct: 188 RPISLCNVIYKIVSKCLVNRLRPILDDLISQNQSAFVPGRMI 229
Score = 35.0 bits (79), Expect(2) = 4e-28
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 98 NRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
N+ C K+D+ KAYD V+WSF+ Q +
Sbjct: 246 NKSPGKAACAYKLDLSKAYDRVDWSFLEQAM 276
>ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group]
gi|255677700|dbj|BAH93889.1| Os07g0417700 [Oryza sativa
Japonica Group]
Length = 1011
Score = 115 bits (288), Expect(2) = 7e-28
Identities = 53/121 (43%), Positives = 82/121 (67%), Gaps = 4/121 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
APG DG+ A F+ ++W V+ E+++R V+ FF TG++PS +N + LIPK + V++F
Sbjct: 137 APGPDGFPARFYERNWGVLKEDIVRVVKTFFLTGVMPSGVNNTAIVLIPKIEQPMEVKDF 196
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIKAITGSR 86
RPI+ C +LYK +SK L NRL+ +LD ++ SQSAFVPGR N I++ E +I ++
Sbjct: 197 RPISLCNVLYKFVSKCLVNRLRPILDELVSQSQSAFVPGRLITDNAILAFECFHSIQKNK 256
Query: 85 H 83
+
Sbjct: 257 N 257
Score = 34.3 bits (77), Expect(2) = 7e-28
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 98 NRKQTSPRCMIKVDIQKAYDSVEWSFVRQML 6
N+ S C K+D+ KAY+ V+W+F+ Q +
Sbjct: 255 NKNPNSSSCAYKLDLSKAYNRVDWTFLEQSM 285
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 114 bits (284), Expect(2) = 9e-28
Identities = 57/114 (50%), Positives = 80/114 (70%), Gaps = 5/114 (4%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRA-VQQFFFTGLLPSEINVALLTLIPKCKNAFSVRE 257
+PG DG+N FF K+W VIG+ V+ A V++FF G L E+N ++TL+PK N ++ +
Sbjct: 290 SPGPDGFNGCFFQKAWLVIGDNVVAAAVKEFFSYGSLLMELNSTIITLVPKVANPTTMSD 349
Query: 256 FRPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELI 107
FRPI+ C YKII+K+LANRLKG L I+G SQS F+PGR NI+++ E+I
Sbjct: 350 FRPISCCNTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEII 403
Score = 35.4 bits (80), Expect(2) = 9e-28
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSVEWSFV 18
Y++ PRC VD+ KA D+VEW F+
Sbjct: 406 YHKADGQPRCTFMVDMMKANDTVEWDFI 433
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 105 bits (262), Expect(2) = 9e-28
Identities = 54/114 (47%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Frame = -2
Query: 433 APGIDGYNAYFFMKSWNVIGEEVIRAVQQFFFTGLLPSEINVALLTLIPKCKNAFSVREF 254
+PG DGY + F+ +W++IG+E VQ FF G LP IN +L LIPK A +R++
Sbjct: 117 SPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDY 176
Query: 253 RPIA*CTILYKIISKILANRLKGVLDSIIGGSQSAFVPGR----NIIISHELIK 104
RPI+ C +LYK+ISKI+ANRLK +L I +QSAFV R N++++ EL+K
Sbjct: 177 RPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVK 230
Score = 43.9 bits (102), Expect(2) = 9e-28
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -1
Query: 101 YNRKQTSPRCMIKVDIQKAYDSVEWSFVRQMLV 3
Y++ S RC IK+DI KA+DSV+WSF+ LV
Sbjct: 232 YHKDSISARCAIKIDISKAFDSVQWSFLTNTLV 264