BLASTX nr result

ID: Mentha29_contig00041497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00041497
         (322 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94476.1| retrotransposon protein, putative, unclassified [...    60   2e-07
ref|XP_002515114.1| conserved hypothetical protein [Ricinus comm...    59   7e-07
ref|XP_002525845.1| conserved hypothetical protein [Ricinus comm...    58   1e-06
gb|ABA98724.1| retrotransposon protein, putative, unclassified [...    57   4e-06
ref|XP_002522673.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>gb|ABA94476.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 940

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/92 (30%), Positives = 55/92 (59%)
 Frame = -2

Query: 294 ITWEQFLEVVSARFEDWKVRKIIMEFNKLKQNGTYDDYLERFVELKACLVLEDSSTFTEE 115
           ++WE+F++ V A+F   + + ++ +FNKL+Q G+   Y +RF +L   L +   S +  E
Sbjct: 192 MSWEEFVDAVCAKFGREEFQGVVRQFNKLRQTGSVTSYAKRFNDLMHQLHVHHPS-WNPE 250

Query: 114 FFIASFLSGLSEELQSVINMFQPRTLHHIIEL 19
           FF+  FL GL  E+++ + + +P  +   ++L
Sbjct: 251 FFVTQFLEGLKPEIRAAVLLHRPSDMDTAVDL 282


>ref|XP_002515114.1| conserved hypothetical protein [Ricinus communis]
           gi|223545594|gb|EEF47098.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 323

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/73 (41%), Positives = 47/73 (64%)
 Frame = -2

Query: 288 WEQFLEVVSARFEDWKVRKIIMEFNKLKQNGTYDDYLERFVELKACLVLEDSSTFTEEFF 109
           W +F E +  RF +  V  ++ EFNKLKQ  +  +Y E+F ELK+ L+L+      E +F
Sbjct: 171 WGKFSEELCRRFGELAVEDVVEEFNKLKQKNSVLEYQEKFEELKS-LMLKYHPWLDEHYF 229

Query: 108 IASFLSGLSEELQ 70
           ++SF+SGL +EL+
Sbjct: 230 VSSFISGLGKELR 242


>ref|XP_002525845.1| conserved hypothetical protein [Ricinus communis]
           gi|223534850|gb|EEF36539.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/89 (35%), Positives = 56/89 (62%)
 Frame = -2

Query: 288 WEQFLEVVSARFEDWKVRKIIMEFNKLKQNGTYDDYLERFVELKACLVLEDSSTFTEEFF 109
           WE F + +  RF    V  I+ E N+++Q G+  +Y ERF EL++ L+L+ +    E +F
Sbjct: 122 WEVFAKELCRRFGKVIVSDIVEESNRIQQVGSVINYQERFEELRS-LMLKYNPMPDESYF 180

Query: 108 IASFLSGLSEELQSVINMFQPRTLHHIIE 22
           ++SF+SGL+EE++S++ + +  TL    E
Sbjct: 181 MSSFVSGLNEEIRSMVKLLKLATLSQAYE 209


>gb|ABA98724.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1269

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 31/90 (34%), Positives = 47/90 (52%)
 Frame = -2

Query: 288 WEQFLEVVSARFEDWKVRKIIMEFNKLKQNGTYDDYLERFVELKACLVLEDSSTFTEEFF 109
           W  F E V A+F   + + +I +F +L+Q GT   Y+E+F EL   L     S +   FF
Sbjct: 185 WNDFSEAVCAKFGREEFQSLIRQFKRLRQEGTILSYVEKFNELMHQLYAHHPS-WNSVFF 243

Query: 108 IASFLSGLSEELQSVINMFQPRTLHHIIEL 19
           I  FL GL  E+ S + + +P  L   ++L
Sbjct: 244 ITEFLDGLKPEVSSAVILHRPNDLDTAVDL 273


>ref|XP_002522673.1| conserved hypothetical protein [Ricinus communis]
           gi|223538149|gb|EEF39760.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 162

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/74 (35%), Positives = 48/74 (64%)
 Frame = -2

Query: 240 VRKIIMEFNKLKQNGTYDDYLERFVELKACLVLEDSSTFTEEFFIASFLSGLSEELQSVI 61
           V  +  EFNKLKQ G  ++Y E+  +LK+  +++  +   E ++++SF+SGLS+EL+ ++
Sbjct: 30  VANVQEEFNKLKQKGNVEEYQEKLKDLKS-FMMKYHAWLDESYYVSSFISGLSKELRPMV 88

Query: 60  NMFQPRTLHHIIEL 19
            +F+   LH   E+
Sbjct: 89  KIFKLSDLHQAYEV 102


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