BLASTX nr result
ID: Mentha29_contig00041164
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00041164
(493 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 125 3e-43
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 122 1e-42
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 122 1e-42
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 122 1e-42
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 127 2e-42
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 128 2e-42
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 128 2e-42
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic... 124 2e-42
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 124 8e-42
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 124 8e-42
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 122 1e-41
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 130 2e-41
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 127 4e-41
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 128 5e-41
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 119 5e-41
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 128 5e-41
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 124 9e-41
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 117 2e-40
emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera] 118 3e-40
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 121 6e-40
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 125 bits (314), Expect(2) = 3e-43
Identities = 61/97 (62%), Positives = 76/97 (78%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKT FLHG+L+E IYM+Q EGF++P ++ VC LK+SLYGLKQS RQWY +F+ ML
Sbjct: 917 LDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLS 976
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASR 291
GF RS +DSCVY+K N + YLLLYVDDMLIA++
Sbjct: 977 HGFKRSEFDSCVYIKFV-NGSPIYLLLYVDDMLIAAK 1012
Score = 75.5 bits (184), Expect(2) = 3e-43
Identities = 35/64 (54%), Positives = 48/64 (75%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
+I LK +L S FDMKDLG AK+ILG++I RDR +G L+L Q Y++K+L +FNMH+ +
Sbjct: 1016 QITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKP 1075
Query: 482 VSVP 493
VS P
Sbjct: 1076 VSTP 1079
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 122 bits (307), Expect(2) = 1e-42
Identities = 60/97 (61%), Positives = 74/97 (76%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKT FLHG+L+E IYM+Q EGF++P + VC LK+SLYGLKQS RQW +F+ ML
Sbjct: 928 LDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLS 987
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASR 291
F RS+YDSCVY+K N + YLLLYVDDMLIA++
Sbjct: 988 HSFKRSKYDSCVYIKHV-NGSPIYLLLYVDDMLIAAK 1023
Score = 76.6 bits (187), Expect(2) = 1e-42
Identities = 36/64 (56%), Positives = 50/64 (78%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
EI +LK L S FDMKDLG+AK+ILG++I RDR++G L+L QH+Y++K+L +FNM +
Sbjct: 1027 EITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKA 1086
Query: 482 VSVP 493
VS P
Sbjct: 1087 VSTP 1090
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 122 bits (307), Expect(2) = 1e-42
Identities = 60/97 (61%), Positives = 74/97 (76%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKT FLHG+L+E IYM+Q EGF++P + VC LK+SLYGLKQS RQW +F+ ML
Sbjct: 930 LDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLS 989
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASR 291
F RS+YDSCVY+K N + YLLLYVDDMLIA++
Sbjct: 990 HSFKRSKYDSCVYIKHV-NGSPIYLLLYVDDMLIAAK 1025
Score = 76.6 bits (187), Expect(2) = 1e-42
Identities = 36/64 (56%), Positives = 50/64 (78%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
EI +LK L S FDMKDLG+AK+ILG++I RDR++G L+L QH+Y++K+L +FNM +
Sbjct: 1029 EITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKA 1088
Query: 482 VSVP 493
VS P
Sbjct: 1089 VSTP 1092
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 122 bits (307), Expect(2) = 1e-42
Identities = 60/97 (61%), Positives = 74/97 (76%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKT FLHG+L+E IYM+Q EGF++P + VC LK+SLYGLKQS RQW +F+ ML
Sbjct: 928 LDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLS 987
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASR 291
F RS+YDSCVY+K N + YLLLYVDDMLIA++
Sbjct: 988 HSFKRSKYDSCVYIKHV-NGSPIYLLLYVDDMLIAAK 1023
Score = 76.6 bits (187), Expect(2) = 1e-42
Identities = 36/64 (56%), Positives = 50/64 (78%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
EI +LK L S FDMKDLG+AK+ILG++I RDR++G L+L QH+Y++K+L +FNM +
Sbjct: 1027 EITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKA 1086
Query: 482 VSVP 493
VS P
Sbjct: 1087 VSTP 1090
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 127 bits (318), Expect(2) = 2e-42
Identities = 63/98 (64%), Positives = 75/98 (76%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
+DVKT FLHG+L+E IYM Q +GFV+P +N VC LKKSLYGLKQS RQWY +F+ ML
Sbjct: 1134 MDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 1193
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASRD 294
F RS YDSCVY+K S + YLLLYVDDMLIA++D
Sbjct: 1194 QKFRRSNYDSCVYLKVVDGSAI-YLLLYVDDMLIAAKD 1230
Score = 71.6 bits (174), Expect(2) = 2e-42
Identities = 33/64 (51%), Positives = 48/64 (75%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
EI +LK +L S F+MKDLG AK+ILG++I R R + +L+L Q Y++K+L +FNMH+ +
Sbjct: 1233 EIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKP 1292
Query: 482 VSVP 493
VS P
Sbjct: 1293 VSTP 1296
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 128 bits (322), Expect(2) = 2e-42
Identities = 64/98 (65%), Positives = 75/98 (76%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
+DVKT FLHG+L+E IYM Q EGFV+P +N VC LKKSLYGLKQS RQWY +F+ ML
Sbjct: 853 MDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 912
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASRD 294
F RS YDSCVY+K S + YLLLYVDDMLIA++D
Sbjct: 913 QKFRRSNYDSCVYLKVVDGSAI-YLLLYVDDMLIAAKD 949
Score = 69.7 bits (169), Expect(2) = 2e-42
Identities = 31/63 (49%), Positives = 48/63 (76%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
EI +LK +L S F+MKDLG AK+ILG++I R+R + +L+L Q Y++K+L +FNMH+ +
Sbjct: 952 EIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSDKLYLSQKGYIEKVLRRFNMHDAKP 1011
Query: 482 VSV 490
+ V
Sbjct: 1012 IYV 1014
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 128 bits (322), Expect(2) = 2e-42
Identities = 64/98 (65%), Positives = 75/98 (76%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
+DVKT FLHG+L+E IYM Q EGFV+P +N VC LKKSLYGLKQS RQWY +F+ ML
Sbjct: 685 MDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 744
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASRD 294
F RS YDSCVY+K S + YLLLYVDDMLIA++D
Sbjct: 745 QKFRRSNYDSCVYLKVVDGSAI-YLLLYVDDMLIAAKD 781
Score = 69.7 bits (169), Expect(2) = 2e-42
Identities = 31/63 (49%), Positives = 48/63 (76%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
EI +LK +L S F+MKDLG AK+ILG++I R+R + +L+L Q Y++K+L +FNMH+ +
Sbjct: 784 EIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSDKLYLSQKGYIEKVLRRFNMHDAKP 843
Query: 482 VSV 490
+ V
Sbjct: 844 IYV 846
>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
Length = 624
Score = 124 bits (312), Expect(2) = 2e-42
Identities = 57/98 (58%), Positives = 73/98 (74%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKT FLHG+L+E IYM Q +GF+ P ++ VC LKKSLYGLKQ+ RQWY +F+ M+
Sbjct: 276 LDVKTAFLHGELEEEIYMEQSDGFIAPGKEHLVCRLKKSLYGLKQAPRQWYKRFHSFMIG 335
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASRD 294
+ +S+YD C+Y + N + YLLLYVDDMLIASRD
Sbjct: 336 QNYCKSQYDDCIYFQNFQNGSFIYLLLYVDDMLIASRD 373
Score = 73.6 bits (179), Expect(2) = 2e-42
Identities = 34/63 (53%), Positives = 50/63 (79%)
Frame = +2
Query: 305 IKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRKV 484
IK+LK EL + FDMK+LG AK+ILG++I RDR+AG+L+L Q Y++++L +FNM+ + V
Sbjct: 377 IKKLKTELSNEFDMKELGAAKKILGMEIRRDRQAGKLFLSQQKYIKRVLDRFNMNNCKPV 436
Query: 485 SVP 493
S P
Sbjct: 437 STP 439
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 124 bits (310), Expect(2) = 8e-42
Identities = 60/97 (61%), Positives = 76/97 (78%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKT FLHG+L+E IYM+Q EGF++P ++ VC LK+SLYGLKQS RQWY +F+ ML
Sbjct: 917 LDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLS 976
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASR 291
GF RS +DSCVY+K N + YLLLYVDD+LIA++
Sbjct: 977 HGFKRSEFDSCVYIKFV-NGSPIYLLLYVDDILIAAK 1012
Score = 72.4 bits (176), Expect(2) = 8e-42
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
+I LK +L S FDMKDLG AK+ILG++I RD+ +G L+L Q Y++K+L FNMH+ +
Sbjct: 1016 QITTLKKQLSSEFDMKDLGAAKKILGMEITRDKNSGLLFLSQQSYIKKVLQCFNMHDAKP 1075
Query: 482 VSVP 493
VS P
Sbjct: 1076 VSTP 1079
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 124 bits (312), Expect(2) = 8e-42
Identities = 61/97 (62%), Positives = 76/97 (78%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKT FLHG+L+E IYM+Q EGF++P ++ VC LK+SLYGLKQS RQWY +F+ ML
Sbjct: 770 LDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLS 829
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASR 291
GF RS +DSCVY+K N + YLLLYVDDMLIA++
Sbjct: 830 HGFKRSEFDSCVYIKFV-NVSPIYLLLYVDDMLIAAK 865
Score = 71.6 bits (174), Expect(2) = 8e-42
Identities = 34/62 (54%), Positives = 47/62 (75%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
+I LK +L S FDMKDL AK+ILG++I RDR +G L+L Q Y++K+L +FNMH+T+
Sbjct: 869 QITTLKKQLSSEFDMKDLDAAKKILGMEITRDRNSGWLFLSQQSYIKKVLQRFNMHDTKP 928
Query: 482 VS 487
VS
Sbjct: 929 VS 930
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 122 bits (307), Expect(2) = 1e-41
Identities = 60/97 (61%), Positives = 74/97 (76%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKT FLHG+L+E IYM+Q EGF++P + VC LK+SLYGLKQS RQW +F+ ML
Sbjct: 928 LDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLS 987
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASR 291
F RS+YDSCVY+K N + YLLLYVDDMLIA++
Sbjct: 988 HSFKRSKYDSCVYIKHV-NGSPIYLLLYVDDMLIAAK 1023
Score = 73.2 bits (178), Expect(2) = 1e-41
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
EI +LK L S FDMKDLG+AK+IL ++I RDR++G L+L QH+Y++K+L +FNM +
Sbjct: 1027 EITKLKKLLSSEFDMKDLGSAKKILVMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKA 1086
Query: 482 VSVP 493
VS P
Sbjct: 1087 VSTP 1090
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 130 bits (326), Expect(2) = 2e-41
Identities = 59/97 (60%), Positives = 76/97 (78%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKT FLHG+L+E IYM Q +GF +P +N VC LKKSLYGLKQS RQWY +F+ +M+K
Sbjct: 902 LDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVK 961
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASR 291
+G++RS YD CVY R + + YL+LYVDDMLIA++
Sbjct: 962 LGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAK 998
Score = 64.7 bits (156), Expect(2) = 2e-41
Identities = 29/64 (45%), Positives = 47/64 (73%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
+I++LK L + F+MKDLG A++ILG++I+RDRE +L+L Q Y+QK+L +F M ++
Sbjct: 1002 DIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKP 1061
Query: 482 VSVP 493
+ P
Sbjct: 1062 IDTP 1065
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 127 bits (320), Expect(2) = 4e-41
Identities = 62/97 (63%), Positives = 77/97 (79%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKTIFLHG+L+E IYM+Q EGF++P ++ VC LK+SLYGLKQS RQWY +F+ ML
Sbjct: 863 LDVKTIFLHGELEEEIYMDQPEGFIVPGKEDDVCKLKRSLYGLKQSPRQWYKRFDSFMLS 922
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASR 291
GF RS +DSCVY+K N + YLLLYVDDMLIA++
Sbjct: 923 HGFKRSEFDSCVYIKFV-NGSHIYLLLYVDDMLIAAK 958
Score = 66.2 bits (160), Expect(2) = 4e-41
Identities = 31/64 (48%), Positives = 46/64 (71%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
+I LK +L S FDMKDL +K+ILG++I RD +G L+L Q Y++K+L +FN+H+ +
Sbjct: 962 QITTLKKQLSSEFDMKDLVASKKILGMEITRDINSGLLFLSQQSYIKKVLQRFNIHDAKP 1021
Query: 482 VSVP 493
VS P
Sbjct: 1022 VSTP 1025
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 128 bits (321), Expect(2) = 5e-41
Identities = 63/96 (65%), Positives = 72/96 (75%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
+DVKT FLHG L+E IYM Q EGF + NKVCLLK+SLYGLKQS RQW L+F+E M
Sbjct: 927 MDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEFMRG 986
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIAS 288
I ++RS YDSCVY K+ T YLLLYVDDMLIAS
Sbjct: 987 IKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIAS 1022
Score = 65.5 bits (158), Expect(2) = 5e-41
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
E+ LK L F+MKDLG+AK+ILG++I RDR+AG L L Q YV+K+L F M +
Sbjct: 1027 EVNELKQLLSREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKP 1086
Query: 482 VSVP 493
VS P
Sbjct: 1087 VSTP 1090
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 119 bits (299), Expect(2) = 5e-41
Identities = 58/97 (59%), Positives = 72/97 (74%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
+DVKT FLHG+L+E I M Q EGF + ++ VCLL KSLYGLKQS RQWY +F++ M+
Sbjct: 925 MDVKTAFLHGNLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQWYRRFDDFMVS 984
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASR 291
G+ RSRYDSCVY + + YLLLYVDDMLIAS+
Sbjct: 985 KGYRRSRYDSCVYFGGSDQGGVAYLLLYVDDMLIASK 1021
Score = 73.9 bits (180), Expect(2) = 5e-41
Identities = 36/64 (56%), Positives = 48/64 (75%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
EI+RLK L + F+MKDLGNAKRILG+DI+RDR AG L+L Q Y++K+L +F M + +
Sbjct: 1025 EIERLKNLLKAEFEMKDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKKVLERFEMQDCKP 1084
Query: 482 VSVP 493
V P
Sbjct: 1085 VQTP 1088
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 128 bits (322), Expect(2) = 5e-41
Identities = 56/99 (56%), Positives = 79/99 (79%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
+DV FLHG+L+E I+M Q +GF++ +N+VCLLK+SLYGLKQS RQWY +F++ M
Sbjct: 569 MDVNRAFLHGELEEEIFMQQPKGFIVKGKENQVCLLKRSLYGLKQSPRQWYKRFDKFMTS 628
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASRDI 297
+G+SRS++D+CVYM++ N + YLLLYVDDML+AS+ I
Sbjct: 629 VGYSRSKFDNCVYMRKLTNGSYVYLLLYVDDMLLASKSI 667
Score = 65.1 bits (157), Expect(2) = 5e-41
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = +2
Query: 296 LPEIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHET 475
+ EI LK +L S F+MKDLG AK+ILGI+ RDR G L + Q DY++++L FNM
Sbjct: 667 ITEIAHLKTQLQSEFEMKDLGCAKKILGIEPYRDRSTGILTISQRDYIERVLKIFNMDAA 726
Query: 476 RKVSVP 493
+ V P
Sbjct: 727 KAVDTP 732
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 124 bits (310), Expect(2) = 9e-41
Identities = 61/100 (61%), Positives = 74/100 (74%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKT FLHG+L+E IYM Q EGFV E + VC LKKSLYGLKQS RQWY +F+ M+
Sbjct: 1226 LDVKTAFLHGNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVS 1285
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASRDIA 300
F R++YDSCVY K + + YLLLYVDDMLIA+++ A
Sbjct: 1286 HEFMRNQYDSCVYFKTLPDGSFIYLLLYVDDMLIAAKNRA 1325
Score = 68.9 bits (167), Expect(2) = 9e-41
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
EI +LK L S F+MKDLG AK+ILG++I RDR+AG L++ Q Y++KL+ F+M ++
Sbjct: 1326 EINKLKQLLSSEFEMKDLGAAKKILGMEIWRDRDAGLLYVSQQKYIEKLMQAFHMDHSKP 1385
Query: 482 VSVP 493
VS P
Sbjct: 1386 VSTP 1389
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 117 bits (293), Expect(2) = 2e-40
Identities = 58/97 (59%), Positives = 72/97 (74%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKT FLHG+L+E IYM+Q EGF++P + VC LK+S YGLKQS RQWY +F+ ML
Sbjct: 601 LDVKTAFLHGELEEEIYMDQPEGFIVPGKEGYVCKLKRSFYGLKQSPRQWYKRFDLFMLS 660
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASR 291
GF RS +DSCVY+K S + LLYVDDMLIA++
Sbjct: 661 HGFKRSEFDSCVYIKFVNGSPI--YLLYVDDMLIAAK 695
Score = 74.3 bits (181), Expect(2) = 2e-40
Identities = 34/64 (53%), Positives = 48/64 (75%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
+I LK +L S FDMKDLG AK+ILG++I RDR +G L+L Q Y++ +L +FNMH+ +
Sbjct: 699 QITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKNVLQRFNMHDAKL 758
Query: 482 VSVP 493
VS+P
Sbjct: 759 VSIP 762
>emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera]
Length = 367
Score = 118 bits (295), Expect(2) = 3e-40
Identities = 56/100 (56%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
+DVKT FLHGDL+E +YM QLEGF+ P ++ V LKKSLYGLKQS RQWY +F ++++
Sbjct: 1 MDVKTTFLHGDLEELVYMVQLEGFIQPGQEHLVYKLKKSLYGLKQSPRQWYKRFESYIIR 60
Query: 181 IGFSRSRYDSCVYMKRA-GNSTMTYLLLYVDDMLIASRDI 297
IG+ R YD CVY+K +S+ +LLLYVDDMLI + +
Sbjct: 61 IGYKRCEYDCCVYVKNLDDDSSFIFLLLYVDDMLIVVKSM 100
Score = 72.8 bits (177), Expect(2) = 3e-40
Identities = 34/64 (53%), Positives = 45/64 (70%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
E+ +LK L FDMKDLG K+ILG++I DR GRLWL QH+YV+++L +FNM +
Sbjct: 102 EVNKLKSLLSKEFDMKDLGATKKILGMEIHGDRALGRLWLSQHNYVKRMLERFNMDNAKP 161
Query: 482 VSVP 493
VS P
Sbjct: 162 VSTP 165
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 121 bits (303), Expect(2) = 6e-40
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = +1
Query: 1 LDVKTIFLHGDLKETIYMNQLEGFVLPENKNKVCLLKKSLYGLKQSSRQWYLKFNEHMLK 180
LDVKT FLHG+L++ IYM+Q EGF++P ++ VC LK+SLYGLKQS RQWY +F+ ML
Sbjct: 250 LDVKTTFLHGELEDEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLS 309
Query: 181 IGFSRSRYDSCVYMKRAGNSTMTYLLLYVDDMLIASR 291
GF S +DSCVY+K N + YLLLYVDDMLIA++
Sbjct: 310 HGFKWSEFDSCVYIKFV-NGSPIYLLLYVDDMLIAAK 345
Score = 68.9 bits (167), Expect(2) = 6e-40
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +2
Query: 302 EIKRLKLELMSGFDMKDLGNAKRILGIDILRDREAGRLWLFQHDYVQKLLMKFNMHETRK 481
+I LK +L S FDMKDLG AK+ILG++I RD G L+L Q Y++K+L FNMH+ +
Sbjct: 349 QITTLKKQLSSEFDMKDLGAAKKILGMEITRDINFGLLFLSQQSYIKKVLEHFNMHDAKP 408
Query: 482 VSVP 493
+S P
Sbjct: 409 ISTP 412