BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00039673
         (632 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS73753.1| hypothetical protein M569_01004 [Genlisea aurea]       211   1e-52
ref|XP_006349790.1| PREDICTED: pentatricopeptide repeat-containi...   179   6e-43
ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi...   178   1e-42
ref|XP_004253145.1| PREDICTED: pentatricopeptide repeat-containi...   177   2e-42
gb|EXC33915.1| hypothetical protein L484_012805 [Morus notabilis]     171   1e-40
ref|XP_006465146.1| PREDICTED: pentatricopeptide repeat-containi...   169   8e-40
ref|XP_006436362.1| hypothetical protein CICLE_v10033972mg [Citr...   167   3e-39
ref|XP_004305365.1| PREDICTED: pentatricopeptide repeat-containi...   162   1e-37
ref|XP_007027603.1| Pentatricopeptide (PPR) repeat-containing pr...   145   1e-32
ref|NP_196771.1| pentatricopeptide repeat-containing protein [Ar...   143   4e-32
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,...   136   5e-30
ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arab...   135   8e-30
ref|XP_006604616.1| PREDICTED: pentatricopeptide repeat-containi...   135   1e-29
ref|XP_006287082.1| hypothetical protein CARUB_v10000242mg [Caps...   134   2e-29
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi...   131   1e-28
ref|XP_007162847.1| hypothetical protein PHAVU_001G185900g [Phas...   129   7e-28
ref|XP_004494138.1| PREDICTED: pentatricopeptide repeat-containi...   120   3e-25
ref|XP_002316451.2| pentatricopeptide repeat-containing family p...   108   1e-21
ref|XP_002872515.1| predicted protein [Arabidopsis lyrata subsp....   108   1e-21
ref|XP_007027604.1| Pentatricopeptide (PPR) repeat-containing pr...   107   4e-21

>gb|EPS73753.1| hypothetical protein M569_01004 [Genlisea aurea]
          Length = 679

 Score =  211 bits (538), Expect = 1e-52
 Identities = 108/176 (61%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
 Frame = -1

Query: 527 QLVEQLRKIRVLIQQSRTETAKRSLKLLIPHHSVSQLFAAFSQS-TPPPHTKPAFADALF 351
           QL E+LRKIR+L+QQ+R ET KR L  LI  HS   L+AAFS S +  P TKP F DAL 
Sbjct: 30  QLSEELRKIRILLQQNRIETTKRHLGSLISLHSPPDLYAAFSDSVSASPSTKPVFRDALL 89

Query: 350 AVYAEAKLPNEAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVW 171
            VYA++KLP+EAA LY L+R+DG+FPS +A N+FLECLV SN++++ L++F  A+  G  
Sbjct: 90  TVYADSKLPDEAACLYALIRADGNFPSRTALNLFLECLVRSNRYEKALEVFHGALAGGFP 149

Query: 170 VDKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
           +DKFSYGKAIQ+++KLGDL KG ELM  MK  G +PN FVYNVLIGGLC+E+RVGD
Sbjct: 150 MDKFSYGKAIQASIKLGDLPKGLELMKLMKRSGEKPNCFVYNVLIGGLCKERRVGD 205


>ref|XP_006349790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Solanum tuberosum]
          Length = 808

 Score =  179 bits (454), Expect = 6e-43
 Identities = 94/180 (52%), Positives = 128/180 (71%)
 Frame = -1

Query: 548 PDPTTQAQLVEQLRKIRVLIQQSRTETAKRSLKLLIPHHSVSQLFAAFSQSTPPPHTKPA 369
           P  ++   L EQLR++R+L+QQ R E AK  L  LI   SVSQL++ FS    P   KP 
Sbjct: 42  PTNSSSQNLEEQLRQLRILLQQRRMENAKGILGTLIHTSSVSQLYSLFS----PSPAKPL 97

Query: 368 FADALFAVYAEAKLPNEAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEA 189
           F+D LF++Y E+KL N+A ELY+L+R D  FPSLS FNVFLE L S  ++ +TL++F++ 
Sbjct: 98  FSDLLFSLYLESKLINQAEELYSLIREDKKFPSLSVFNVFLESLNSLRRYKKTLEVFSDV 157

Query: 188 VDCGVWVDKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRV 9
           +  G+ VDK SYGKAI SAVKLGD+GK  EL++ M++  +  + FVYNV++GGLC+EKRV
Sbjct: 158 MKWGIRVDKTSYGKAILSAVKLGDMGKALELLDCMRNGRVGMDKFVYNVVMGGLCKEKRV 217


>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  178 bits (451), Expect = 1e-42
 Identities = 99/219 (45%), Positives = 143/219 (65%), Gaps = 21/219 (9%)
 Frame = -1

Query: 596 PAKSCSIPLSRPFCTA-----PDPTT-------QAQLVEQLR-----KIRVLIQQSRTET 468
           P KS  +P  +PFC+      P  TT       Q Q+ EQ R     K++ L+QQ RTET
Sbjct: 19  PQKSLLLPSCKPFCSLTEKQEPTSTTNNSTTNLQGQVQEQARHEHVQKLQTLLQQGRTET 78

Query: 467 AKRSLKLLI----PHHSVSQLFAAFSQSTPPPHTKPAFADALFAVYAEAKLPNEAAELYT 300
           A+R ++ ++    P  S S L+  FS S+ P   KP F+D L ++ +E+K+ +E+AELY 
Sbjct: 79  ARRLIRSMLLPKSPFSSPSHLYTLFSLSSTP--MKPLFSDMLLSICSESKMVSESAELYM 136

Query: 299 LVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWVDKFSYGKAIQSAVKLG 120
           L++ DG  PS+++ N+FLE LVS+ +++ TL++F+E V+ G+  D+F YGKAIQ+AVKLG
Sbjct: 137 LMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLG 196

Query: 119 DLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
           DL +  ELM  MK  G+ P  FVYNV+IGGLC+EKR+ D
Sbjct: 197 DLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKD 235


>ref|XP_004253145.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Solanum lycopersicum]
          Length = 790

 Score =  177 bits (449), Expect = 2e-42
 Identities = 94/180 (52%), Positives = 127/180 (70%)
 Frame = -1

Query: 548 PDPTTQAQLVEQLRKIRVLIQQSRTETAKRSLKLLIPHHSVSQLFAAFSQSTPPPHTKPA 369
           P  +    LVEQLR++R+LIQQ R E AK  L  LI   SVSQL++ FS    P   KP 
Sbjct: 43  PTDSPSQNLVEQLRQLRILIQQRRMENAKGILGTLIHTSSVSQLYSLFS----PSPAKPL 98

Query: 368 FADALFAVYAEAKLPNEAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEA 189
            +D LF++Y E+KL N+A ELY+L+R +  FPSLSA NVFLE L S  ++ +TL++F++ 
Sbjct: 99  LSDLLFSLYLESKLINQAEELYSLIREEKKFPSLSAINVFLESLNSLRKYKKTLEVFSDV 158

Query: 188 VDCGVWVDKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRV 9
           ++ G+ VDK SYGKAI SAVK+GDLGK  EL++ M+   +  + FVYNV++GGLC+EKRV
Sbjct: 159 MNWGIRVDKASYGKAILSAVKIGDLGKALELLDCMRSGKVGMDKFVYNVVMGGLCKEKRV 218


>gb|EXC33915.1| hypothetical protein L484_012805 [Morus notabilis]
          Length = 821

 Score =  171 bits (434), Expect = 1e-40
 Identities = 93/217 (42%), Positives = 137/217 (63%), Gaps = 19/217 (8%)
 Frame = -1

Query: 596 PAKSCSIPLSRPFCTAPDPTT---------------QAQLVEQLRKIRVLIQQSRTETAK 462
           P K   +  SR FC+ P+P +               + +  EQ++K++ L+QQ RT+TA+
Sbjct: 20  PPKLRPLASSRLFCSEPEPESDIVRQSDEVSSNLREEDERHEQVQKLQSLLQQGRTDTAR 79

Query: 461 RSLKLLI----PHHSVSQLFAAFSQSTPPPHTKPAFADALFAVYAEAKLPNEAAELYTLV 294
           R +K L+    P  S S LF   S S+PP   KPAF+  L +   E+++  EA ELY L 
Sbjct: 80  RLIKSLVASKSPFSSPSDLFYLLSLSSPP--MKPAFSSMLMSACLESRMIAEAMELYALT 137

Query: 293 RSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWVDKFSYGKAIQSAVKLGDL 114
           R +G+FPSL++FN+ LE L+SS Q+ + L++F E V+     D+F+Y KAIQ++VKLGDL
Sbjct: 138 RKEGTFPSLASFNLLLETLISSKQYGKALELFYEIVESRFRPDRFTYAKAIQASVKLGDL 197

Query: 113 GKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
            K  EL+N MK  G+ PN F+YNV++GGLC+E+R+ D
Sbjct: 198 KKAGELLNGMKRIGMSPNVFIYNVMLGGLCKERRIRD 234


>ref|XP_006465146.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568821359|ref|XP_006465147.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like isoform X2 [Citrus sinensis]
           gi|568821361|ref|XP_006465148.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like isoform X3 [Citrus sinensis]
           gi|568821363|ref|XP_006465149.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like isoform X4 [Citrus sinensis]
          Length = 808

 Score =  169 bits (427), Expect = 8e-40
 Identities = 96/224 (42%), Positives = 136/224 (60%), Gaps = 17/224 (7%)
 Frame = -1

Query: 623 MARRFRR-------LLPAKSCSIPLSRPFCTAPDPTTQ-----AQLVEQLRKIRVLIQQS 480
           MAR+ R         LP+ S S+ LSR  C+    +        +  EQ+RKIR+L Q +
Sbjct: 1   MARQLRHPPKFPPIFLPSLSLSLSLSRSLCSQSSNSNHNSHGDQERNEQVRKIRILFQNN 60

Query: 479 RTETAKRSLKLLI-----PHHSVSQLFAAFSQSTPPPHTKPAFADALFAVYAEAKLPNEA 315
           RTE A+  +K ++     P  S  +LF+ FS S+P  + KP F + L ++ + AKLP+EA
Sbjct: 61  RTEAAQSLIKSIVLSNASPFTSPHELFSLFSVSSP--YYKPTFTNILLSILSSAKLPSEA 118

Query: 314 AELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWVDKFSYGKAIQS 135
            +LY   ++DG+  SL + NV LECLV  NQ+DR L +F E V  G   DKF+YGKA+Q+
Sbjct: 119 LQLYASTKADGTRLSLDSINVLLECLVRCNQYDRALDLFDEIVCMGFRPDKFTYGKAVQA 178

Query: 134 AVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
           AVK+GDL +  E+ + M+    RPN FVYNVLI G C+EK++ D
Sbjct: 179 AVKIGDLKRACEIFDGMEKSRTRPNVFVYNVLISGFCKEKKIRD 222



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 34/114 (29%), Positives = 52/114 (45%)
 Frame = -1

Query: 347 VYAEAKLPNEAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWV 168
           + A  KL NE  ++  +       P L  +N  + C        + L + +E VD G+  
Sbjct: 639 IVAVEKLFNEMLQINLV-------PDLLVYNALIHCYAEHGDVQKALVLHSEMVDQGICP 691

Query: 167 DKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVG 6
           DK +Y   I   ++ G L +  EL+N MK  G+ P    YN+L+ G C  K  G
Sbjct: 692 DKMTYNSLIFGHLREGKLSEVKELVNDMKVKGLIPKADTYNILVKGYCNLKDFG 745


>ref|XP_006436362.1| hypothetical protein CICLE_v10033972mg [Citrus clementina]
           gi|557538558|gb|ESR49602.1| hypothetical protein
           CICLE_v10033972mg [Citrus clementina]
          Length = 804

 Score =  167 bits (422), Expect = 3e-39
 Identities = 96/220 (43%), Positives = 136/220 (61%), Gaps = 13/220 (5%)
 Frame = -1

Query: 623 MARRFRRLL---PAKSCSIPLSRPFCTAPDPTTQ-----AQLVEQLRKIRVLIQQSRTET 468
           MAR+ R  L   P    S+ LSR  CT    +        +  EQ+RKIR+L Q++R E 
Sbjct: 1   MARQLRHPLKFRPIFPPSLSLSRSLCTQSSNSNHNSHGDQERNEQVRKIRILFQKNRPEA 60

Query: 467 AKRSLKLLI-----PHHSVSQLFAAFSQSTPPPHTKPAFADALFAVYAEAKLPNEAAELY 303
           A+R +K ++     P  S  +LF+ FS S+P  + KP FA+ L ++ + AKLP++A +LY
Sbjct: 61  AQRLIKSIVLSNASPFTSPHELFSLFSVSSP--YYKPTFANILLSILSSAKLPSDALQLY 118

Query: 302 TLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWVDKFSYGKAIQSAVKL 123
              ++DG+  SL + NV LECLVS NQ+DR L +F E V  G   DKF+YGKA+Q+AVK+
Sbjct: 119 ASTKADGTRLSLDSINVLLECLVSCNQYDRALDLFDEIVCMGFRPDKFTYGKAVQAAVKI 178

Query: 122 GDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
           GDL +  E+ + M+    RPN FVYN LI G C+EK++ D
Sbjct: 179 GDLKRACEIFDGMEKSRTRPNVFVYNNLISGFCKEKKIRD 218



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 35/114 (30%), Positives = 52/114 (45%)
 Frame = -1

Query: 347 VYAEAKLPNEAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWV 168
           + A  KL NE  ++  +       P L  +N  + C        + L + +E VD G+  
Sbjct: 635 IVAVEKLFNEMLQINLV-------PDLLVYNALIHCYAEHGDVQKALVLHSEMVDQGIRP 687

Query: 167 DKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVG 6
           DK +Y   I   ++ G L K  EL+N MK  G+ P    YN+L+ G C  K  G
Sbjct: 688 DKMTYNSLIFGHLREGKLSKVKELVNDMKVKGLIPKADTYNILVKGYCNLKDFG 741


>ref|XP_004305365.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 802

 Score =  162 bits (409), Expect = 1e-37
 Identities = 93/214 (43%), Positives = 133/214 (62%), Gaps = 6/214 (2%)
 Frame = -1

Query: 626 SMARRFRRLLPAKSCSIPLSRPFCTAPDPTTQAQLVEQLRKIRVLIQQSRTETAKRSLKL 447
           S+  R  + LP K+ ++  S   CT  D   Q +  EQ+RK+R+L+QQ RT+ A R +K 
Sbjct: 6   SLLLRLPKSLPTKTQNLR-SLSVCTVSDQDQQHRH-EQVRKLRILLQQGRTDAAARFIKS 63

Query: 446 LI----PHHSVSQLFAAFSQSTPPPHTKPAFADALFAVYAEAKLPNEAAELYTLVRSDGS 279
           LI    P  S S L+  FS S P     PAF+D L     ++K+P +A ELY L+R    
Sbjct: 64  LILPTSPFSSPSDLYDLFSLSAPS--ITPAFSDMLLTACTDSKMPKQAVELYALMRKSDL 121

Query: 278 FPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWV--DKFSYGKAIQSAVKLGDLGKG 105
            PSL+  N  LECLV S  F+ TL++F++  + G  +  DKF+YGKA+Q+AVKLGDL + 
Sbjct: 122 RPSLATLNQLLECLVGSKMFEETLELFSQIFESGKGIKPDKFTYGKAVQAAVKLGDLKRA 181

Query: 104 FELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
            E++ +MK   + PN F++NVLIGGLC+E+R+ D
Sbjct: 182 GEIVESMKTMRLVPNVFIFNVLIGGLCKERRMRD 215


>ref|XP_007027603.1| Pentatricopeptide (PPR) repeat-containing protein, putative isoform
           1 [Theobroma cacao] gi|590631587|ref|XP_007027605.1|
           Pentatricopeptide (PPR) repeat-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|508716208|gb|EOY08105.1| Pentatricopeptide (PPR)
           repeat-containing protein, putative isoform 1 [Theobroma
           cacao] gi|508716210|gb|EOY08107.1| Pentatricopeptide
           (PPR) repeat-containing protein, putative isoform 1
           [Theobroma cacao]
          Length = 819

 Score =  145 bits (366), Expect = 1e-32
 Identities = 74/176 (42%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
 Frame = -1

Query: 518 EQLRKIRVLIQQSRTETAKRSLKLLI----PHHSVSQLFAAFSQSTPPPHTKPAFADALF 351
           + ++ +   +QQ +T+ A+   K L+    P  S S LF  FS ++P    K  F++ LF
Sbjct: 60  QHIQNLSAFLQQGQTQAAQNLTKSLLFSKSPFASPSDLFTLFSLTSPS--LKLIFSNILF 117

Query: 350 AVYAEAKLPNEAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVW 171
           ++ AE+K+ +EA ELY  +R +G  PS+++ N+ LE LVS N+FD+T+ +F E ++ G  
Sbjct: 118 SLLAESKMHSEALELYKAMRKEGMQPSITSLNLLLESLVSLNKFDKTINLFEEIIESGFR 177

Query: 170 VDKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
            +KF YGKA+Q+AVKLGDL +  E +++MK  G+ P+ F+YN LIGG+C+EKR+ D
Sbjct: 178 PNKFMYGKAVQAAVKLGDLKRANEYVHSMKKKGVSPSLFIYNALIGGVCKEKRIRD 233



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
 Frame = -1

Query: 350 AVYAEAKLPN--EAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCG 177
           AV A  KL +   A E    ++  G  PSL  +N  +  +    +     K+F E ++  
Sbjct: 186 AVQAAVKLGDLKRANEYVHSMKKKGVSPSLFIYNALIGGVCKEKRIRDAEKLFHEMLERK 245

Query: 176 VWVDKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
           +     +Y   I    K+G+L K F+L   M    + PN   +N+L+GGLCR  R+ D
Sbjct: 246 LVASVVTYNTLIDGYCKVGELEKAFDLKERMVRENVEPNLVTFNILVGGLCRAHRMED 303


>ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
           gi|9759377|dbj|BAB10028.1| unnamed protein product
           [Arabidopsis thaliana] gi|28973713|gb|AAO64173.1|
           unknown protein [Arabidopsis thaliana]
           gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis
           thaliana] gi|110737169|dbj|BAF00534.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332004380|gb|AED91763.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  143 bits (361), Expect = 4e-32
 Identities = 91/208 (43%), Positives = 127/208 (61%), Gaps = 6/208 (2%)
 Frame = -1

Query: 608 RRLLPAKSCSIPLSRPFCTAPDPTTQAQLVEQLRKIRVLIQQSRTETAKRSLKLLI---- 441
           RRL  A +   P S+P   AP PT      E+LR +RVL+QQ+R ETA+  L  L+    
Sbjct: 29  RRLFSASTDPEPESQPE-QAP-PTNPVTGDEKLRNLRVLLQQNRIETARGVLSSLLRSDS 86

Query: 440 -PHHSVSQLFAAFSQSTPPPHTKPAFADALFAVYA-EAKLPNEAAELYTLVRSDGSFPSL 267
            P  S  +LF+AFS S+P    K  F+  L +V   E+K+ +EAA+L+  +R++G +PS 
Sbjct: 87  TPFASPKELFSAFSLSSPS--LKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSS 144

Query: 266 SAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWVDKFSYGKAIQSAVKLGDLGKGFELMNA 87
            +  + L+ LV + QF  T+ +F   ++      KF YGKAIQ+AVKL D+GKG EL N 
Sbjct: 145 DSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNR 204

Query: 86  MKHCGIRPNGFVYNVLIGGLCREKRVGD 3
           MKH  I P+ F+YNVLI GLC+ KR+ D
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMND 232


>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 817

 Score =  136 bits (343), Expect = 5e-30
 Identities = 75/176 (42%), Positives = 107/176 (60%), Gaps = 4/176 (2%)
 Frame = -1

Query: 518 EQLRKIRVLIQQSRTETAKRSLKLLI----PHHSVSQLFAAFSQSTPPPHTKPAFADALF 351
           EQ+ K+++L+QQ+  E A    K LI       S S LF+ FS  + P   +   +D L 
Sbjct: 56  EQVNKLQILLQQNCNEAAYSLAKSLILTKSTFSSPSDLFSCFSACSIP--LRITLSDMLL 113

Query: 350 AVYAEAKLPNEAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVW 171
           +V  ++K+  EA ELY  +R DG  PSL + ++   CLV+  QF + + +F E  + G  
Sbjct: 114 SVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFR 173

Query: 170 VDKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
            D F Y KAIQ+AVKL +L  G E +++M+  G+RPN F+YNVLIGGLCREKR+ D
Sbjct: 174 TDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229


>ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata] gi|297317348|gb|EFH47770.1| hypothetical protein
            ARALYDRAFT_350399 [Arabidopsis lyrata subsp. lyrata]
          Length = 1202

 Score =  135 bits (341), Expect = 8e-30
 Identities = 87/216 (40%), Positives = 125/216 (57%), Gaps = 21/216 (9%)
 Frame = -1

Query: 587  SCSIPLSRPFCTAPDPTTQAQLV---------------EQLRKIRVLIQQSRTETAKRSL 453
            SCS  L   F  + DP +++Q                 E+LR +RVL+QQ+R ETA+  L
Sbjct: 395  SCSCRL---FSASTDPESESQPAQAPPTNPVTGDEERHEKLRNLRVLLQQNRIETARGVL 451

Query: 452  KLLI-----PHHSVSQLFAAFSQSTPPPHTKPAFADALFAVYA-EAKLPNEAAELYTLVR 291
              L+     P  S  +LF+AFS S+P    K  F+  L +V   E+K+ +EAA+L+  +R
Sbjct: 452  YSLLRSDSAPFTSPKELFSAFSLSSPS--LKHDFSYLLLSVLLNESKMISEAADLFFALR 509

Query: 290  SDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWVDKFSYGKAIQSAVKLGDLG 111
            ++G FPS  +  + L+ LV + QF  T+ +F   ++      KF YGKAIQ+AVKL D+G
Sbjct: 510  NEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVG 569

Query: 110  KGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
            KG EL N MKH  I P  F+YNVLI GLC+ +++ D
Sbjct: 570  KGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKD 605


>ref|XP_006604616.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 409

 Score =  135 bits (339), Expect = 1e-29
 Identities = 75/185 (40%), Positives = 116/185 (62%), Gaps = 4/185 (2%)
 Frame = -1

Query: 545 DPTTQAQLVEQLRKIRVLIQQSRTETAKRSLKLLI----PHHSVSQLFAAFSQSTPPPHT 378
           DP  Q +L ++++K+  L+ + RT TA+R L+ L+       S+S+L A  S        
Sbjct: 56  DPQYQNRL-QKVQKLETLLNRGRTVTARRFLRSLLLTKTAFSSLSELHAHVS-------- 106

Query: 377 KPAFADALFAVYAEAKLPNEAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIF 198
           KP F+D L  + + +K+ +EA +LY+ +R DG  PS  + N  L  LV S  F++TL +F
Sbjct: 107 KPLFSDTLLWLCSVSKMLDEATDLYSSMRKDGFIPSTRSVNRLLRTLVDSRHFEKTLPVF 166

Query: 197 AEAVDCGVWVDKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCRE 18
           A+ VD G+  D  +YGKA+Q+AV L DL KGFELM +M+  G+ P+ F YN+++GGLC+ 
Sbjct: 167 ADVVDSGIRPDAVTYGKAVQAAVMLKDLDKGFELMKSMEKDGMGPSVFAYNLILGGLCKV 226

Query: 17  KRVGD 3
           +R+ D
Sbjct: 227 RRIKD 231



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 58/224 (25%), Positives = 88/224 (39%), Gaps = 15/224 (6%)
 Frame = -1

Query: 629 TSMARRF-RRLLPAKSCSIPLSRPFCTAPDPTTQAQLVEQLRKIRVLIQQSRTETAKRSL 453
           T  ARRF R LL  K+    LS        P     L+      ++L + +   ++ R  
Sbjct: 78  TVTARRFLRSLLLTKTAFSSLSELHAHVSKPLFSDTLLWLCSVSKMLDEATDLYSSMRKD 137

Query: 452 KLLIPHHSVSQLFAAFSQSTPPPHTKPAFADALF------------AVYAEAKLPN--EA 315
             +    SV++L      S     T P FAD +             AV A   L +  + 
Sbjct: 138 GFIPSTRSVNRLLRTLVDSRHFEKTLPVFADVVDSGIRPDAVTYGKAVQAAVMLKDLDKG 197

Query: 314 AELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWVDKFSYGKAIQS 135
            EL   +  DG  PS+ A+N+ L  L    +     K+F + +   V  +  +Y   I  
Sbjct: 198 FELMKSMEKDGMGPSVFAYNLILGGLCKVRRIKDARKLFDKTIQRNVVPNTVTYNTLIDG 257

Query: 134 AVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
             K+GD+ + F     M+   +  N   YN L+ GLC   RV D
Sbjct: 258 YCKVGDIEEAFGFKERMREQNVECNLVTYNSLLNGLCGSGRVED 301


>ref|XP_006287082.1| hypothetical protein CARUB_v10000242mg [Capsella rubella]
           gi|482555788|gb|EOA19980.1| hypothetical protein
           CARUB_v10000242mg [Capsella rubella]
          Length = 818

 Score =  134 bits (338), Expect = 2e-29
 Identities = 83/217 (38%), Positives = 124/217 (57%), Gaps = 15/217 (6%)
 Frame = -1

Query: 614 RFRRLLPAKSCSIPLSRPFCTAPDP---------TTQAQLVEQLRKIRVLIQQSRTETAK 462
           +F   + A SC +  +    T P+P         T   +  E+LR +RVL+QQ+R ETA+
Sbjct: 18  KFTESVSACSCRLFSASTDTTHPEPEQAPSTNSITGDEERHEKLRNLRVLLQQNRIETAR 77

Query: 461 RSLKLLI-----PHHSVSQLFAAFSQSTPPPHTKPAFADALFAVY-AEAKLPNEAAELYT 300
             L  ++     P  S  +LF+AFS S+P    K  F+  L +V   ++K+  EAA+L+ 
Sbjct: 78  GVLSAMLRSDSMPFTSPKELFSAFSLSSPS--LKHDFSYMLLSVVLTDSKMVTEAADLFF 135

Query: 299 LVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWVDKFSYGKAIQSAVKLG 120
            +R++G FPS  +  + L+ LV + QF   + +F   +D      KF YGKAI +AVKLG
Sbjct: 136 ALRNEGIFPSSDSLTLLLDHLVKAKQFRVAINVFLNILDSDFRPSKFMYGKAILAAVKLG 195

Query: 119 DLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRV 9
           D GKG +L N MKH  I P+ F+YNVLI GLC+ +++
Sbjct: 196 DTGKGLKLFNRMKHDRISPSVFIYNVLIDGLCKSRKM 232


>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like isoform X1 [Glycine max]
           gi|571446303|ref|XP_006577051.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 777

 Score =  131 bits (330), Expect = 1e-28
 Identities = 75/185 (40%), Positives = 114/185 (61%), Gaps = 4/185 (2%)
 Frame = -1

Query: 545 DPTTQAQLVEQLRKIRVLIQQSRTETAKRSLKLLI----PHHSVSQLFAAFSQSTPPPHT 378
           DP  Q +L ++++K+  LI + RT TA+R L+ L+       S+S+L A  S        
Sbjct: 35  DPQYQKRL-QKVQKLETLISRGRTITARRFLRSLLLTKTAFSSLSELHAHVS-------- 85

Query: 377 KPAFADALFAVYAEAKLPNEAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIF 198
           KP F+D L  + + +K+ +EA +LY+ +R DG  PS  + N  L  LV S  F++TL +F
Sbjct: 86  KPFFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVF 145

Query: 197 AEAVDCGVWVDKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCRE 18
           A+ +D G   D  +YGKA+Q+AV L DL KGFELM +M   G+ P+ F YN+++GGLC+ 
Sbjct: 146 ADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKV 205

Query: 17  KRVGD 3
           +R+ D
Sbjct: 206 RRIKD 210


>ref|XP_007162847.1| hypothetical protein PHAVU_001G185900g [Phaseolus vulgaris]
           gi|561036311|gb|ESW34841.1| hypothetical protein
           PHAVU_001G185900g [Phaseolus vulgaris]
          Length = 776

 Score =  129 bits (324), Expect = 7e-28
 Identities = 80/209 (38%), Positives = 121/209 (57%), Gaps = 10/209 (4%)
 Frame = -1

Query: 599 LPAKSCSIPLSRPFCTAP------DPTTQAQLVEQLRKIRVLIQQSRTETAKRSLKLLI- 441
           LP KS     S  FC+        DP  Q +L ++++K+  L+ + RT TA+R LK L  
Sbjct: 12  LPPKSHLNNFSSFFCSQSLTLCESDPKYQHRL-KKVQKLEDLLNRGRTITARRFLKSLFL 70

Query: 440 ---PHHSVSQLFAAFSQSTPPPHTKPAFADALFAVYAEAKLPNEAAELYTLVRSDGSFPS 270
                 S+ +L A  S        KP F+D L  + + +K+ NEA +LY  +R DG  PS
Sbjct: 71  SKTTFSSLCELHAHVS--------KPLFSDTLLWLCSVSKMLNEATDLYFSMRKDGFLPS 122

Query: 269 LSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWVDKFSYGKAIQSAVKLGDLGKGFELMN 90
             + N  L  LV+S  F++TL +FA+ VD  +  D  +YGKA+Q+AV L DL KGF+L++
Sbjct: 123 TRSVNRLLRTLVASRHFEKTLSVFADVVDSDIQPDVITYGKAVQAAVMLKDLDKGFDLVS 182

Query: 89  AMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
           +M+  G+ P  F YN+++GGLC+ +R+ D
Sbjct: 183 SMEKEGLGPYVFAYNLILGGLCKVRRIKD 211


>ref|XP_004494138.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Cicer arietinum]
          Length = 773

 Score =  120 bits (301), Expect = 3e-25
 Identities = 67/177 (37%), Positives = 103/177 (58%)
 Frame = -1

Query: 533 QAQLVEQLRKIRVLIQQSRTETAKRSLKLLIPHHSVSQLFAAFSQSTPPPHTKPAFADAL 354
           Q Q ++ ++K++ L+ Q RT+TA+R LK L+P    SQL         P  +KP F   L
Sbjct: 40  QQQWLQNVQKLQSLLHQRRTKTAQRYLKFLLP----SQLH--------PLVSKPIFLQTL 87

Query: 353 FAVYAEAKLPNEAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGV 174
               +     N+  ++Y  ++ DG    +   N  L+ LV S QF+  L +F E V+ G+
Sbjct: 88  LPFCSNPNTLNQVMDIYHSMKKDGFTHPMVFLNPILQTLVDSQQFEEALTLFTELVESGI 147

Query: 173 WVDKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
             D FSY K +++AV L DL K FEL+N+M+  GIRP  +VYN+++GGLC+ K++ D
Sbjct: 148 RPDVFSYAKVVRAAVMLKDLNKCFELLNSMEKDGIRPFVYVYNLVLGGLCKVKKIKD 204


>ref|XP_002316451.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550330600|gb|EEF02622.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 724

 Score =  108 bits (271), Expect = 1e-21
 Identities = 55/118 (46%), Positives = 74/118 (62%)
 Frame = -1

Query: 356 LFAVYAEAKLPNEAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCG 177
           L +V +E+K+ ++ +ELY  +R +G  PS     + +E LV S +FD  L +F E V  G
Sbjct: 2   LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61

Query: 176 VWVDKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
              DK  YG+A+ +AVKLGDL    EL   MK   + PN FVYNVLIGGLC+EKR+ D
Sbjct: 62  FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRD 119


>ref|XP_002872515.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318352|gb|EFH48774.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 192

 Score =  108 bits (270), Expect = 1e-21
 Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
 Frame = -1

Query: 506 KIRVLIQQSRTETAKRSLKLLIPHHSVSQLFAAFSQSTPPP-HTKPAFADALFAVYAEA- 333
           ++R++ + SR  T K +  +     S S     FS ST P   ++PA A    AV  +  
Sbjct: 4   RLRLVSKSSRYATVKFTESV-----SASCSCRLFSASTDPKSESQPAQAPPTNAVTGDEE 58

Query: 332 --------KLPNEAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCG 177
                   ++ +EAA+L+  +RS+G FPS  +  + L+ LV + QF  T+ +F   +D  
Sbjct: 59  RHEKLRNLRMISEAADLFFALRSEGIFPSSDSLTLLLDHLVKAKQFRVTINVFLNILDSD 118

Query: 176 VWVDKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
               KF YGKAIQ+ VKL D+GKG EL N MKH  I P+ F+YNVLI GLC+ +++ D
Sbjct: 119 FRPSKFMYGKAIQATVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKVRKMKD 176


>ref|XP_007027604.1| Pentatricopeptide (PPR) repeat-containing protein, putative isoform
           2 [Theobroma cacao] gi|508716209|gb|EOY08106.1|
           Pentatricopeptide (PPR) repeat-containing protein,
           putative isoform 2 [Theobroma cacao]
          Length = 684

 Score =  107 bits (266), Expect = 4e-21
 Identities = 48/98 (48%), Positives = 73/98 (74%)
 Frame = -1

Query: 296 VRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCGVWVDKFSYGKAIQSAVKLGD 117
           +R +G  PS+++ N+ LE LVS N+FD+T+ +F E ++ G   +KF YGKA+Q+AVKLGD
Sbjct: 1   MRKEGMQPSITSLNLLLESLVSLNKFDKTINLFEEIIESGFRPNKFMYGKAVQAAVKLGD 60

Query: 116 LGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
           L +  E +++MK  G+ P+ F+YN LIGG+C+EKR+ D
Sbjct: 61  LKRANEYVHSMKKKGVSPSLFIYNALIGGVCKEKRIRD 98



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
 Frame = -1

Query: 350 AVYAEAKLPN--EAAELYTLVRSDGSFPSLSAFNVFLECLVSSNQFDRTLKIFAEAVDCG 177
           AV A  KL +   A E    ++  G  PSL  +N  +  +    +     K+F E ++  
Sbjct: 51  AVQAAVKLGDLKRANEYVHSMKKKGVSPSLFIYNALIGGVCKEKRIRDAEKLFHEMLERK 110

Query: 176 VWVDKFSYGKAIQSAVKLGDLGKGFELMNAMKHCGIRPNGFVYNVLIGGLCREKRVGD 3
           +     +Y   I    K+G+L K F+L   M    + PN   +N+L+GGLCR  R+ D
Sbjct: 111 LVASVVTYNTLIDGYCKVGELEKAFDLKERMVRENVEPNLVTFNILVGGLCRAHRMED 168