BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00037199
         (852 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus...   290   2e-78
gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus...   290   2e-78
ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor...   229   6e-60
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl...   227   2e-59
ref|XP_002301949.1| pseudouridine synthase family protein [Popul...   222   2e-57
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   221   2e-57
ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citr...   218   1e-56
ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citr...   218   1e-56
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl...   218   2e-56
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...   212   6e-55
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   212   6e-55
ref|XP_007017900.1| Pseudouridine synthase family protein isofor...   213   1e-54
ref|XP_007017901.1| Pseudouridine synthase family protein isofor...   211   3e-54
ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chlor...   208   1e-53
gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]           208   1e-53
gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea]       209   3e-53
ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Caps...   207   4e-53
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [...   206   9e-53
ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phas...   206   1e-52
ref|NP_974151.1| RNA pseudourine synthase 2 [Arabidopsis thalian...   206   1e-52

>gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus]
          Length = 432

 Score =  290 bits (741), Expect(2) = 2e-78
 Identities = 147/204 (72%), Positives = 168/204 (82%), Gaps = 2/204 (0%)
 Frame = +3

Query: 147 MMSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAANXXXXXXXXXXXGRPNNYS 326
           M+SLQSL+WSS+KP  INPR+P    L +T+ AY +SIPA             GRPNN+S
Sbjct: 1   MLSLQSLNWSSIKPFPINPRNPAFWRLLSTSSAYPDSIPADYSDSDDSQDSISGRPNNFS 60

Query: 327 GVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGD 506
           G KIEE V LD  KLR+DSWI+SRINGISRARVQSSIRSGLVSVNG VI+K SH+VR GD
Sbjct: 61  GHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVSHVVRDGD 120

Query: 507 MVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHC 686
            V+CTIAELQPLRAEPE+IPLDIVYED++++VVNKPAHMVVHPAPGNA GTLVNGILHHC
Sbjct: 121 SVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNGILHHC 180

Query: 687 RLSTVCFSPDSLPET--DDDSGDE 752
           RLSTVCF+P+SLP+   DDDS DE
Sbjct: 181 RLSTVCFNPESLPDNIDDDDSIDE 204



 Score = 30.4 bits (67), Expect(2) = 2e-78
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 806 SEASVRPGIVHRLD 847
           SE+SVRPGIVHRLD
Sbjct: 210 SESSVRPGIVHRLD 223


>gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus]
          Length = 422

 Score =  290 bits (741), Expect(2) = 2e-78
 Identities = 147/204 (72%), Positives = 168/204 (82%), Gaps = 2/204 (0%)
 Frame = +3

Query: 147 MMSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAANXXXXXXXXXXXGRPNNYS 326
           M+SLQSL+WSS+KP  INPR+P    L +T+ AY +SIPA             GRPNN+S
Sbjct: 1   MLSLQSLNWSSIKPFPINPRNPAFWRLLSTSSAYPDSIPADYSDSDDSQDSISGRPNNFS 60

Query: 327 GVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGD 506
           G KIEE V LD  KLR+DSWI+SRINGISRARVQSSIRSGLVSVNG VI+K SH+VR GD
Sbjct: 61  GHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVSHVVRDGD 120

Query: 507 MVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHC 686
            V+CTIAELQPLRAEPE+IPLDIVYED++++VVNKPAHMVVHPAPGNA GTLVNGILHHC
Sbjct: 121 SVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNGILHHC 180

Query: 687 RLSTVCFSPDSLPET--DDDSGDE 752
           RLSTVCF+P+SLP+   DDDS DE
Sbjct: 181 RLSTVCFNPESLPDNIDDDDSIDE 204



 Score = 30.4 bits (67), Expect(2) = 2e-78
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 806 SEASVRPGIVHRLD 847
           SE+SVRPGIVHRLD
Sbjct: 210 SESSVRPGIVHRLD 223


>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
           lycopersicum]
          Length = 436

 Score =  229 bits (584), Expect(2) = 6e-60
 Identities = 115/163 (70%), Positives = 137/163 (84%), Gaps = 1/163 (0%)
 Frame = +3

Query: 306 GRPNNYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKAS 485
           GR +NYSGVK+EE V+   GKLRLDSW++SRI+G+SRARVQSSIRSGLVSVNGRV +K S
Sbjct: 50  GRRSNYSGVKLEETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVS 109

Query: 486 HMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLV 665
           HMV+ GD VDCTIA+L+PLRAEPEDIPLDIVYEDE+V+VVNKPAHMVVHPAPGNATGTLV
Sbjct: 110 HMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLV 169

Query: 666 NGILHHCRLSTVCF-SPDSLPETDDDSGDEISALSLDQGHDGD 791
           +GILHHC L TV F   + L + +D S DE++  S ++  + D
Sbjct: 170 SGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYD 212



 Score = 29.3 bits (64), Expect(2) = 6e-60
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 803 LSEASVRPGIVHRLD 847
           + E+SVRPGIVHRLD
Sbjct: 217 MCESSVRPGIVHRLD 231


>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Solanum tuberosum]
          Length = 431

 Score =  227 bits (579), Expect(2) = 2e-59
 Identities = 112/155 (72%), Positives = 133/155 (85%), Gaps = 1/155 (0%)
 Frame = +3

Query: 306 GRPNNYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKAS 485
           GR +NYSGVK+EE V+   GKLRLDSW++SRI+G+SRARVQSSIRSGLVSVNGRV +K S
Sbjct: 50  GRRSNYSGVKLEETVDGKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVS 109

Query: 486 HMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLV 665
           HMV+ GD VDCTIA+L+PLRAEPEDIPLDIV+EDE+V+VVNKPAHMVVHPAPGNATGTLV
Sbjct: 110 HMVKGGDKVDCTIADLKPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVVHPAPGNATGTLV 169

Query: 666 NGILHHCRLSTVCF-SPDSLPETDDDSGDEISALS 767
           +GILHHC L T+ F   + L + +D S DE++  S
Sbjct: 170 SGILHHCSLPTISFLGEEVLSDAEDASDDELNVFS 204



 Score = 29.3 bits (64), Expect(2) = 2e-59
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 803 LSEASVRPGIVHRLD 847
           + E+SVRPGIVHRLD
Sbjct: 217 MCESSVRPGIVHRLD 231


>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
           gi|222843675|gb|EEE81222.1| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 444

 Score =  222 bits (565), Expect(2) = 2e-57
 Identities = 122/207 (58%), Positives = 148/207 (71%)
 Frame = +3

Query: 144 KMMSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAANXXXXXXXXXXXGRPNNY 323
           +M+S+ S+S  S     ++ +    R LT   H+ +   P +N           G+  NY
Sbjct: 29  RMLSISSVSRCSAPSFFLSQKPTASRLLTV--HSSSTREPNSNQNP--------GQRINY 78

Query: 324 SGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLG 503
           SGVK+EE V+   GK RLDSWI+SRI+GISRARVQSSI+SGLVSVNG+VI+K SH V+ G
Sbjct: 79  SGVKLEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNGKVIDKVSHNVKAG 138

Query: 504 DMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHH 683
           D V+C I+ELQPLRAEPE+IPLDIVYEDENV+VVNKPAHMVVHPAPGNATGTLVNGILHH
Sbjct: 139 DKVNCVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHPAPGNATGTLVNGILHH 198

Query: 684 CRLSTVCFSPDSLPETDDDSGDEISAL 764
           C L TV  S + L   +D S D+   L
Sbjct: 199 CSLPTVS-SQEVLSGAEDVSDDDDEGL 224



 Score = 28.1 bits (61), Expect(2) = 2e-57
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 812 ASVRPGIVHRLD 847
           ASVRPGIVHRLD
Sbjct: 231 ASVRPGIVHRLD 242


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  221 bits (564), Expect(2) = 2e-57
 Identities = 113/160 (70%), Positives = 131/160 (81%), Gaps = 3/160 (1%)
 Frame = +3

Query: 306 GRPNNYSGVKIEEKV---ELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVIN 476
           GR  NY+GV++EE V     D GKLRLDSWI+SRI GISRARVQSSIRSGLVSVN R+++
Sbjct: 53  GRRTNYAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVD 112

Query: 477 KASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATG 656
           K SH++R GD V+CTI+ELQPLRAEPEDIPLDIVYEDE+V+VVNKPAHMVVHPAPGNA+G
Sbjct: 113 KVSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASG 172

Query: 657 TLVNGILHHCRLSTVCFSPDSLPETDDDSGDEISALSLDQ 776
           TLVNGILHHC L TV   P+   E DD S DE ++ +  Q
Sbjct: 173 TLVNGILHHCSLPTVAL-PNRDSEEDDISDDEFNSFAAGQ 211



 Score = 28.5 bits (62), Expect(2) = 2e-57
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 800 GLSEASVRPGIVHRLD 847
           G  E ++RPGIVHRLD
Sbjct: 214 GTCETNIRPGIVHRLD 229


>ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537377|gb|ESR48495.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 341

 Score =  218 bits (555), Expect(2) = 1e-56
 Identities = 120/208 (57%), Positives = 144/208 (69%), Gaps = 4/208 (1%)
 Frame = +3

Query: 141 MKMMSLQSLSWSSV---KPLLINPRSPYLRPLTATTHAYANSIPAANXXXXXXXXXXXGR 311
           M M+SL S SW S    K L  +P               ++S    N             
Sbjct: 1   MTMLSLNSASWGSASCTKGLQFSPTKIPFGVFKILRARCSSSSSGGNNREPIA------- 53

Query: 312 PNNYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHM 491
             NY+GV++EE V+   GKLRLD+WI+SRI+GISRARVQSSIRSGLVSVNG+V++K SH 
Sbjct: 54  --NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHN 111

Query: 492 VRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNG 671
           V+ GDMV+CTI+ELQPLRAE EDIPLDIVYED+NV+VVNKPAHMVVHPAPGNATGTLVNG
Sbjct: 112 VKGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNG 171

Query: 672 ILHHCRLSTVCFS-PDSLPETDDDSGDE 752
           ILHHC L T+  S  ++  + +D S DE
Sbjct: 172 ILHHCSLPTLASSNQEAFSDAEDISDDE 199



 Score = 29.3 bits (64), Expect(2) = 1e-56
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 803 LSEASVRPGIVHRLD 847
           +S AS+RPGIVHRLD
Sbjct: 205 ISGASIRPGIVHRLD 219


>ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537376|gb|ESR48494.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 324

 Score =  218 bits (555), Expect(2) = 1e-56
 Identities = 120/208 (57%), Positives = 144/208 (69%), Gaps = 4/208 (1%)
 Frame = +3

Query: 141 MKMMSLQSLSWSSV---KPLLINPRSPYLRPLTATTHAYANSIPAANXXXXXXXXXXXGR 311
           M M+SL S SW S    K L  +P               ++S    N             
Sbjct: 1   MTMLSLNSASWGSASCTKGLQFSPTKIPFGVFKILRARCSSSSSGGNNREPIA------- 53

Query: 312 PNNYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHM 491
             NY+GV++EE V+   GKLRLD+WI+SRI+GISRARVQSSIRSGLVSVNG+V++K SH 
Sbjct: 54  --NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHN 111

Query: 492 VRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNG 671
           V+ GDMV+CTI+ELQPLRAE EDIPLDIVYED+NV+VVNKPAHMVVHPAPGNATGTLVNG
Sbjct: 112 VKGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNG 171

Query: 672 ILHHCRLSTVCFS-PDSLPETDDDSGDE 752
           ILHHC L T+  S  ++  + +D S DE
Sbjct: 172 ILHHCSLPTLASSNQEAFSDAEDISDDE 199



 Score = 29.3 bits (64), Expect(2) = 1e-56
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 803 LSEASVRPGIVHRLD 847
           +S AS+RPGIVHRLD
Sbjct: 205 ISGASIRPGIVHRLD 219


>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
           sinensis]
          Length = 421

 Score =  218 bits (554), Expect(2) = 2e-56
 Identities = 119/208 (57%), Positives = 144/208 (69%), Gaps = 4/208 (1%)
 Frame = +3

Query: 141 MKMMSLQSLSWSSV---KPLLINPRSPYLRPLTATTHAYANSIPAANXXXXXXXXXXXGR 311
           M M+SL S SW S    K L  +P               ++S    N             
Sbjct: 1   MTMLSLNSASWGSASCTKGLQFSPTKIPFGVFKILRARCSSSSSGGNNREPIA------- 53

Query: 312 PNNYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHM 491
             NY+GV++EE V+   GKLRLD+WI+SRI+GISRARVQSSIRSGLVS+NG+V++K SH 
Sbjct: 54  --NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSHN 111

Query: 492 VRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNG 671
           V+ GDMV+CTI+ELQPLRAE EDIPLDIVYED+NV+VVNKPAHMVVHPAPGNATGTLVNG
Sbjct: 112 VKGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNG 171

Query: 672 ILHHCRLSTVCFS-PDSLPETDDDSGDE 752
           ILHHC L T+  S  ++  + +D S DE
Sbjct: 172 ILHHCSLPTLASSNQEAFSDAEDISDDE 199



 Score = 29.3 bits (64), Expect(2) = 2e-56
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 803 LSEASVRPGIVHRLD 847
           +S AS+RPGIVHRLD
Sbjct: 205 ISGASIRPGIVHRLD 219


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score =  212 bits (540), Expect(2) = 6e-55
 Identities = 104/151 (68%), Positives = 125/151 (82%)
 Frame = +3

Query: 318 NYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVR 497
           NY+G ++EE V+++ GK+RLDSWI+ RINGISRARVQSSIR+GLVSVNGRVI+K SH V+
Sbjct: 60  NYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVK 119

Query: 498 LGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGIL 677
            GD+++CTI+ELQPLRAEPEDI LDIVYEDE+V+VVNKPAHMVVHPAPGNATGTLVN IL
Sbjct: 120 AGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAIL 179

Query: 678 HHCRLSTVCFSPDSLPETDDDSGDEISALSL 770
           +HC L  V  S        D S DE S++ +
Sbjct: 180 NHCSLPMVATSTGENESDSDVSDDEFSSIGV 210



 Score = 29.6 bits (65), Expect(2) = 6e-55
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 803 LSEASVRPGIVHRLD 847
           +SEA +RPGIVHRLD
Sbjct: 214 VSEAPIRPGIVHRLD 228


>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score =  212 bits (540), Expect(2) = 6e-55
 Identities = 104/151 (68%), Positives = 125/151 (82%)
 Frame = +3

Query: 318 NYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVR 497
           NY+G ++EE V+++ GK+RLDSWI+ RINGISRARVQSSIR+GLVSVNGRVI+K SH V+
Sbjct: 60  NYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVK 119

Query: 498 LGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGIL 677
            GD+++CTI+ELQPLRAEPEDI LDIVYEDE+V+VVNKPAHMVVHPAPGNATGTLVN IL
Sbjct: 120 AGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAIL 179

Query: 678 HHCRLSTVCFSPDSLPETDDDSGDEISALSL 770
           +HC L  V  S        D S DE S++ +
Sbjct: 180 NHCSLPMVATSTGENESDSDVSDDEFSSIGV 210



 Score = 29.6 bits (65), Expect(2) = 6e-55
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 803 LSEASVRPGIVHRLD 847
           +SEA +RPGIVHRLD
Sbjct: 214 VSEAPIRPGIVHRLD 228


>ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
           gi|508723228|gb|EOY15125.1| Pseudouridine synthase
           family protein isoform 1 [Theobroma cacao]
          Length = 433

 Score =  213 bits (542), Expect(2) = 1e-54
 Identities = 120/215 (55%), Positives = 149/215 (69%), Gaps = 2/215 (0%)
 Frame = +3

Query: 114 LVSSFSVSAMKMMSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAANXXXXXXX 293
           +VSS+S           +S S V    ++PR P L P T +    A + P++        
Sbjct: 1   MVSSYSCCPFPSTKAFQISPSFV---FLSPRYPKLLPFTLSGILRARARPSSGCAAKTQE 57

Query: 294 XXXXGRPNNYSGVKIEEKVE-LDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRV 470
                   +Y+GV++EE V+    GKLRLDSWI+SRI GISRARVQSSI+SGLV+VNGRV
Sbjct: 58  PIR----TSYTGVQLEETVDGTKQGKLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRV 113

Query: 471 INKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNA 650
           ++K SH +R GD V+C I+ELQPLRAEPEDIPLDIVYED++V+VVNKP HMVVHPAPGNA
Sbjct: 114 VDKVSHGLRHGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPGNA 173

Query: 651 TGTLVNGILHHCRLSTVCFS-PDSLPETDDDSGDE 752
           TGTLVNGILHHC L TV  S  + L +T+D S D+
Sbjct: 174 TGTLVNGILHHCSLPTVALSEKEVLSDTEDVSDDD 208



 Score = 28.1 bits (61), Expect(2) = 1e-54
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 812 ASVRPGIVHRLD 847
           ASVRPGIVHRLD
Sbjct: 219 ASVRPGIVHRLD 230


>ref|XP_007017901.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
           cacao] gi|508723229|gb|EOY15126.1| Pseudouridine
           synthase family protein isoform 2, partial [Theobroma
           cacao]
          Length = 409

 Score =  211 bits (538), Expect(2) = 3e-54
 Identities = 113/190 (59%), Positives = 140/190 (73%), Gaps = 2/190 (1%)
 Frame = +3

Query: 189 LLINPRSPYLRPLTATTHAYANSIPAANXXXXXXXXXXXGRPNNYSGVKIEEKVE-LDCG 365
           + ++PR P L P T +    A + P++                +Y+GV++EE V+    G
Sbjct: 10  VFLSPRYPKLLPFTLSGILRARARPSSGCAAKTQEPIR----TSYTGVQLEETVDGTKQG 65

Query: 366 KLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLR 545
           KLRLDSWI+SRI GISRARVQSSI+SGLV+VNGRV++K SH +R GD V+C I+ELQPLR
Sbjct: 66  KLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRVVDKVSHGLRHGDKVNCVISELQPLR 125

Query: 546 AEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRLSTVCFS-PDSL 722
           AEPEDIPLDIVYED++V+VVNKP HMVVHPAPGNATGTLVNGILHHC L TV  S  + L
Sbjct: 126 AEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPGNATGTLVNGILHHCSLPTVALSEKEVL 185

Query: 723 PETDDDSGDE 752
            +T+D S D+
Sbjct: 186 SDTEDVSDDD 195



 Score = 28.1 bits (61), Expect(2) = 3e-54
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 812 ASVRPGIVHRLD 847
           ASVRPGIVHRLD
Sbjct: 206 ASVRPGIVHRLD 217


>ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cicer
           arietinum]
          Length = 438

 Score =  208 bits (529), Expect(2) = 1e-53
 Identities = 108/177 (61%), Positives = 134/177 (75%), Gaps = 7/177 (3%)
 Frame = +3

Query: 306 GRP-NNYSGVKIEEKV--ELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVIN 476
           G P +NY+GV++EE V  E+  GKLRLD+WI+SRINGISRARVQSSI++GLV VNGR+++
Sbjct: 58  GEPKSNYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVNGRLVD 117

Query: 477 KASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATG 656
           K S  VR GD + CTIAELQ LRA PE+IPLDIVYEDE+++V+NKPAHMVVHPAPGN +G
Sbjct: 118 KVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAPGNTSG 177

Query: 657 TLVNGILHHCRLSTVCFSPDSLPETDDDSGDEISALSLD----QGHDGDIGLAYPRP 815
           TLVNGILHHC L  V FS D      +DS DE++  +      +G D  + +A  RP
Sbjct: 178 TLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASIRP 234



 Score = 29.6 bits (65), Expect(2) = 1e-53
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 803 LSEASVRPGIVHRLD 847
           LS AS+RPGIVHRLD
Sbjct: 227 LSIASIRPGIVHRLD 241


>gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]
          Length = 369

 Score =  208 bits (529), Expect(2) = 1e-53
 Identities = 100/158 (63%), Positives = 127/158 (80%), Gaps = 1/158 (0%)
 Frame = +3

Query: 318 NYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVR 497
           N++GV++E  V +D GK+RLDSWI+SR++GISRARVQSSIR GLV VNG+V++K S  V+
Sbjct: 74  NFAGVRLEATVAVDSGKVRLDSWISSRVSGISRARVQSSIRLGLVRVNGQVVDKVSQNVK 133

Query: 498 LGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGIL 677
            GD +DCTI+ELQPL+AE EDIPL+IV+ED++V+VVNKP HMVVHPAPGNA GTLVNGIL
Sbjct: 134 TGDKIDCTISELQPLKAEAEDIPLEIVHEDDSVLVVNKPPHMVVHPAPGNAKGTLVNGIL 193

Query: 678 HHCRLSTVCFS-PDSLPETDDDSGDEISALSLDQGHDG 788
           HHC L T+ FS  +SL + +D   DE   +S+D    G
Sbjct: 194 HHCSLPTIAFSHQESLSDDEDTCDDEFRGMSMDASISG 231



 Score = 29.6 bits (65), Expect(2) = 1e-53
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 803 LSEASVRPGIVHRLD 847
           +S ASVRPGIVHRLD
Sbjct: 229 ISGASVRPGIVHRLD 243


>gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea]
          Length = 1063

 Score =  209 bits (533), Expect(2) = 3e-53
 Identities = 119/225 (52%), Positives = 149/225 (66%), Gaps = 2/225 (0%)
 Frame = +3

Query: 147 MMSLQSLSWSSVKPL-LINPRSPYLRPLTATTHAYANSIPAANXXXXXXXXXXXGRPNNY 323
           + SLQ   W S KP  +I+ R+  L          +NS+  A            G+   +
Sbjct: 2   LTSLQGRCWRSAKPRRVISRRNLCLLKFVTVACPRSNSLQNATSDSDSDDCAFSGQSAGH 61

Query: 324 SGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLG 503
           S ++IEE V L+  K+RLDSWI+SRI GISRARVQSSIRSG VSVNG V+NK S++VR G
Sbjct: 62  SRLRIEEAVCLESEKVRLDSWISSRIGGISRARVQSSIRSGFVSVNGSVVNKVSYLVRHG 121

Query: 504 DMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHH 683
           D+V+C++ EL+PLRAEPEDIPLDIV+EDE+++V+NKP HMVVHPAPGNA GTLVNGIL H
Sbjct: 122 DVVNCSVPELRPLRAEPEDIPLDIVHEDEHILVLNKPPHMVVHPAPGNANGTLVNGILGH 181

Query: 684 CRL-STVCFSPDSLPETDDDSGDEISALSLDQGHDGDIGLAYPRP 815
           C+L  +  FSPD   E ++DS D     SLD    G    A  RP
Sbjct: 182 CQLPPSSSFSPD--VEIEEDSSDGSCIDSLDHHTGGRFFAADVRP 224



 Score = 26.6 bits (57), Expect(2) = 3e-53
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +2

Query: 812 ASVRPGIVHRLD 847
           A VRPGIVHRLD
Sbjct: 220 ADVRPGIVHRLD 231


>ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Capsella rubella]
           gi|482570987|gb|EOA35175.1| hypothetical protein
           CARUB_v10020321mg [Capsella rubella]
          Length = 432

 Score =  207 bits (528), Expect(2) = 4e-53
 Identities = 103/153 (67%), Positives = 129/153 (84%), Gaps = 3/153 (1%)
 Frame = +3

Query: 318 NYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVR 497
           N +G++IEE V+   GK+RLDSWI+SRING+SRARVQSSIR GLV+VNGRV++K SH V+
Sbjct: 65  NNAGLRIEETVDDLKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNVK 124

Query: 498 LGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGIL 677
            GD V+CTI+ELQPL+AE EDIPLDIVYED++V+VVNKPAHMVVHPAPGN TGTLVNGIL
Sbjct: 125 AGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGIL 184

Query: 678 HHCRLSTVCFSPDSLPETDDDS---GDEISALS 767
           HHC L +V +S     ++DD+S   G+E+++ S
Sbjct: 185 HHCSLPSVAYSSPEDDDSDDESFSDGEEMTSSS 217



 Score = 28.1 bits (61), Expect(2) = 4e-53
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 812 ASVRPGIVHRLD 847
           ASVRPGIVHRLD
Sbjct: 221 ASVRPGIVHRLD 232


>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 399

 Score =  206 bits (524), Expect(2) = 9e-53
 Identities = 101/148 (68%), Positives = 120/148 (81%), Gaps = 3/148 (2%)
 Frame = +3

Query: 318 NYSGVKIEEKVEL---DCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASH 488
           NY G+++EE V++      KLRLDSWI+SRI+GISRARVQSSI+SGLVSVNGRV++K SH
Sbjct: 52  NYGGIRLEETVQVVHAKSVKLRLDSWISSRISGISRARVQSSIKSGLVSVNGRVVDKVSH 111

Query: 489 MVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVN 668
            V+ GD V CTI+ELQPLRAEPED+PLDIVYEDE+++VVNKP HMVVHPAPGN TGTLVN
Sbjct: 112 NVKFGDKVTCTISELQPLRAEPEDMPLDIVYEDEHLLVVNKPPHMVVHPAPGNPTGTLVN 171

Query: 669 GILHHCRLSTVCFSPDSLPETDDDSGDE 752
           GILHHC L TV  S   +    +D  D+
Sbjct: 172 GILHHCNLPTVAISSQEVLSDAEDRSDD 199



 Score = 28.5 bits (62), Expect(2) = 9e-53
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +2

Query: 809 EASVRPGIVHRLD 847
           E+S+RPGIVHRLD
Sbjct: 209 ESSIRPGIVHRLD 221


>ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
           gi|561009207|gb|ESW08114.1| hypothetical protein
           PHAVU_009G019500g [Phaseolus vulgaris]
          Length = 447

 Score =  206 bits (525), Expect(2) = 1e-52
 Identities = 109/187 (58%), Positives = 136/187 (72%), Gaps = 2/187 (1%)
 Frame = +3

Query: 207 SPYLRPLTATTHAYANSIPAANXXXXXXXXXXXGRPNNYSGVKIEEKVELDCG--KLRLD 380
           SP    L AT++ + ++I +A             R  N+SG+++EE V+   G  KLRLD
Sbjct: 25  SPSSLFLYATSYKFRSTIASACSGFTGDSDSDGERKLNFSGLRLEEAVDSRIGSAKLRLD 84

Query: 381 SWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPED 560
           SWI+SRINGISRARVQSSI+SGLV VNGRV++KAS  V+ GD + CTIAELQ LRA PE+
Sbjct: 85  SWISSRINGISRARVQSSIKSGLVHVNGRVVDKASFNVKAGDQIKCTIAELQKLRAVPEN 144

Query: 561 IPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRLSTVCFSPDSLPETDDD 740
           IPLDIVYEDE+V+V+NKPAHMVVHPAPGN +GTLVNGILHHC L  V FS +      +D
Sbjct: 145 IPLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEGLSDTED 204

Query: 741 SGDEISA 761
             DE+++
Sbjct: 205 CDDEVNS 211



 Score = 27.3 bits (59), Expect(2) = 1e-52
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +2

Query: 806 SEASVRPGIVHRLD 847
           S +S+RPGIVHRLD
Sbjct: 227 SMSSIRPGIVHRLD 240


>ref|NP_974151.1| RNA pseudourine synthase 2 [Arabidopsis thaliana]
           gi|122215273|sp|Q3ECD0.1|PUS2_ARATH RecName: Full=RNA
           pseudouridine synthase 2, chloroplastic; AltName:
           Full=RNA pseudouridylate synthase 2; AltName:
           Full=RNA-uridine isomerase 2; Flags: Precursor
           gi|332197669|gb|AEE35790.1| RNA pseudourine synthase 2
           [Arabidopsis thaliana]
          Length = 430

 Score =  206 bits (523), Expect(2) = 1e-52
 Identities = 103/145 (71%), Positives = 122/145 (84%)
 Frame = +3

Query: 318 NYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVR 497
           N +G++IEE V+   GK+RLDSWI+SRING+SRARVQSSIR GLV+VNGRV++K SH V+
Sbjct: 65  NNAGLRIEEIVDAAKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNVK 124

Query: 498 LGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGIL 677
            GD V+CTI+ELQPL+AE EDIPLDIVYED++V+VVNKPAHMVVHPAPGN TGTLVNGIL
Sbjct: 125 SGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGIL 184

Query: 678 HHCRLSTVCFSPDSLPETDDDSGDE 752
           HHC L  V +S     E DDDS +E
Sbjct: 185 HHCSLPCVDYSNS---EEDDDSDEE 206



 Score = 28.1 bits (61), Expect(2) = 1e-52
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 812 ASVRPGIVHRLD 847
           ASVRPGIVHRLD
Sbjct: 223 ASVRPGIVHRLD 234