BLASTX nr result

ID: Mentha29_contig00037147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00037147
         (228 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU32469.1| hypothetical protein MIMGU_mgv1a008371mg [Mimulus...    67   3e-09
ref|XP_006416304.1| hypothetical protein EUTSA_v10008012mg [Eutr...    60   3e-07
ref|NP_564139.1| F-box protein SKP2A [Arabidopsis thaliana] gi|7...    58   1e-06
gb|AAM63110.1| F-box protein AtFBL5 [Arabidopsis thaliana]             58   1e-06
ref|XP_002306672.1| F-box family protein [Populus trichocarpa] g...    57   2e-06
ref|XP_006356329.1| PREDICTED: F-box protein SKP2A-like [Solanum...    57   3e-06
gb|EPS69842.1| hypothetical protein M569_04919 [Genlisea aurea]        56   6e-06
ref|XP_006300375.1| hypothetical protein CARUB_v10022482mg [Caps...    56   6e-06

>gb|EYU32469.1| hypothetical protein MIMGU_mgv1a008371mg [Mimulus guttatus]
          Length = 375

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 33/52 (63%), Positives = 36/52 (69%)
 Frame = +3

Query: 72  GGDESSEWKDIPAELLMRILSLSXXXXXXXXXXXXSGVCRGWRDAVSWGLTH 227
           GG   SEWKDIPAELL+RILSL+            SGVC GWRDA+SWGLTH
Sbjct: 36  GGLSISEWKDIPAELLLRILSLADDQTVVVA----SGVCHGWRDAISWGLTH 83


>ref|XP_006416304.1| hypothetical protein EUTSA_v10008012mg [Eutrema salsugineum]
           gi|557094075|gb|ESQ34657.1| hypothetical protein
           EUTSA_v10008012mg [Eutrema salsugineum]
          Length = 360

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 36/69 (52%), Positives = 39/69 (56%)
 Frame = +3

Query: 18  MGGAKEGLDFSFYNMAILGGDESSEWKDIPAELLMRILSLSXXXXXXXXXXXXSGVCRGW 197
           +GGA   LD  F  M  + G    EWKDIP ELLMRILSL             SGVC GW
Sbjct: 4   VGGASMELDQCFQKMK-MEGISIKEWKDIPVELLMRILSL----VDDRNVIVASGVCSGW 58

Query: 198 RDAVSWGLT 224
           RDA+S GLT
Sbjct: 59  RDAISLGLT 67


>ref|NP_564139.1| F-box protein SKP2A [Arabidopsis thaliana]
           gi|75177240|sp|Q9LPL4.1|SKP2A_ARATH RecName: Full=F-box
           protein SKP2A; AltName: Full=FBL5-like protein;
           Short=AtFBL5; AltName: Full=SKP2-like protein 1;
           Short=AtSKP2;1 gi|9454572|gb|AAF87895.1|AC015447_5
           Unknown protein [Arabidopsis thaliana]
           gi|16604366|gb|AAL24189.1| At1g21410/F24J8_17
           [Arabidopsis thaliana] gi|19699206|gb|AAL90969.1|
           At1g21410/F24J8_17 [Arabidopsis thaliana]
           gi|332191979|gb|AEE30100.1| F-box protein SKP2A
           [Arabidopsis thaliana]
          Length = 360

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/70 (52%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = +3

Query: 18  MGG-AKEGLDFSFYNMAILGGDESSEWKDIPAELLMRILSLSXXXXXXXXXXXXSGVCRG 194
           MGG A   LD  F  M  + G    EWKDIP ELLMRILSL             SGVC G
Sbjct: 3   MGGEASMELDQCFQKMK-MEGISIKEWKDIPVELLMRILSL----VDDRNVIVASGVCTG 57

Query: 195 WRDAVSWGLT 224
           WRDA+S+GLT
Sbjct: 58  WRDAISFGLT 67


>gb|AAM63110.1| F-box protein AtFBL5 [Arabidopsis thaliana]
          Length = 360

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/70 (52%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = +3

Query: 18  MGG-AKEGLDFSFYNMAILGGDESSEWKDIPAELLMRILSLSXXXXXXXXXXXXSGVCRG 194
           MGG A   LD  F  M  + G    EWKDIP ELLMRILSL             SGVC G
Sbjct: 3   MGGEASMELDQCFQKMK-MEGISIKEWKDIPVELLMRILSL----VDDRNVIVASGVCTG 57

Query: 195 WRDAVSWGLT 224
           WRDA+S+GLT
Sbjct: 58  WRDAISFGLT 67


>ref|XP_002306672.1| F-box family protein [Populus trichocarpa]
           gi|222856121|gb|EEE93668.1| F-box family protein
           [Populus trichocarpa]
          Length = 363

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
 Frame = +3

Query: 33  EGLDFSFYNMAIL--GGDESSEWKDIPAELLMRILSLSXXXXXXXXXXXXSGVCRGWRDA 206
           E L+  F  + +L  GG   +EWKDIP ELL+RI+SL             SGVC GWRDA
Sbjct: 10  EDLNLCFEKLMMLAFGGAVITEWKDIPVELLLRIVSL----VDDRTVIMASGVCSGWRDA 65

Query: 207 VSWGLTH 227
           +  GLTH
Sbjct: 66  ICMGLTH 72


>ref|XP_006356329.1| PREDICTED: F-box protein SKP2A-like [Solanum tuberosum]
          Length = 365

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/73 (45%), Positives = 39/73 (53%)
 Frame = +3

Query: 6   GACEMGGAKEGLDFSFYNMAILGGDESSEWKDIPAELLMRILSLSXXXXXXXXXXXXSGV 185
           G C+MGG           + ++G     EWKDIP ELL+RI SL             SGV
Sbjct: 21  GVCKMGGG----------VMMMG-----EWKDIPMELLLRIASL----VDDRTVIVASGV 61

Query: 186 CRGWRDAVSWGLT 224
           C GWRDA+SWGLT
Sbjct: 62  CSGWRDAISWGLT 74


>gb|EPS69842.1| hypothetical protein M569_04919 [Genlisea aurea]
          Length = 342

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/71 (47%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = +3

Query: 18  MGGAKE-GLDFSFYNMAI-LGGDESSEWKDIPAELLMRILSLSXXXXXXXXXXXXSGVCR 191
           M GA+E  LD S   M     G    +WKDIP ELL+RI+SL             SGVC 
Sbjct: 1   MKGAEELDLDRSLGKMVFDYDGGGVEDWKDIPVELLLRIVSL----VDDRTVIVASGVCH 56

Query: 192 GWRDAVSWGLT 224
           GWRDA+ WGLT
Sbjct: 57  GWRDAIRWGLT 67


>ref|XP_006300375.1| hypothetical protein CARUB_v10022482mg [Capsella rubella]
           gi|482569085|gb|EOA33273.1| hypothetical protein
           CARUB_v10022482mg [Capsella rubella]
          Length = 360

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/68 (50%), Positives = 39/68 (57%)
 Frame = +3

Query: 21  GGAKEGLDFSFYNMAILGGDESSEWKDIPAELLMRILSLSXXXXXXXXXXXXSGVCRGWR 200
           G  ++ L+  F  M  + G   SEWKDIP ELLMRILSL             SG+C GWR
Sbjct: 5   GETRQELNRCFEKMK-MEGFVISEWKDIPVELLMRILSL----VDDRTVVIASGICSGWR 59

Query: 201 DAVSWGLT 224
           DAVS GLT
Sbjct: 60  DAVSLGLT 67


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