BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00035985
         (416 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    72   6e-11
emb|CAN77739.1| hypothetical protein VITISV_043316 [Vitis vinifera]    71   2e-10
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]    70   2e-10
dbj|BAD43406.1| hypothetical protein [Arabidopsis thaliana]            68   1e-09
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    67   2e-09
gb|AAC62795.1| contains similarity to retroviral aspartyl protea...    67   3e-09
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]    67   3e-09
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    66   6e-09
gb|AAD41974.1| putative retroelement pol polyprotein [Arabidopsi...    66   6e-09
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]    65   7e-09
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...    65   1e-08
dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]            65   1e-08
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]                64   3e-08
emb|CAN61222.1| hypothetical protein VITISV_034850 [Vitis vinifera]    62   8e-08
emb|CAA19696.1| putative LTR retrotransposon (fragment) [Arabido...    61   2e-07
ref|XP_004245314.1| PREDICTED: uncharacterized protein LOC101251...    60   2e-07
emb|CBI24911.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002278097.1| PREDICTED: uncharacterized protein LOC100260...    60   2e-07
gb|ABW74573.1| putative pol polyprotein [Boechera divaricarpa]         60   2e-07
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...    60   3e-07

>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 37/74 (50%), Positives = 47/74 (63%)
 Frame = +2

Query: 194 VFVPFPIYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRI 373
           V +   I L++VLF+P F  NL+SISSLT      V F    C IQD +KG+ +G G+RI
Sbjct: 486 VLINKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRI 545

Query: 374 GNLYVLDPAQPTVS 415
           GNLYVLD   P +S
Sbjct: 546 GNLYVLDTQSPAIS 559


>emb|CAN77739.1| hypothetical protein VITISV_043316 [Vitis vinifera]
          Length = 548

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
 Frame = +2

Query: 218 LKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVLDP 397
           L++VL+VP F +NL+ IS+LT S+   V F ++ C IQD  +  +IGIGRR GNLYVLDP
Sbjct: 143 LENVLYVPQFRFNLILISALTQSHCCFVKFEFESCFIQDRMQRQMIGIGRRDGNLYVLDP 202

Query: 398 AQ--PTVS 415
           A   PT++
Sbjct: 203 ANLFPTLA 210


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/61 (55%), Positives = 46/61 (75%)
 Frame = +2

Query: 212 IYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVL 391
           + L+ VL++P+F +NL+SIS+LT +N  S  FT   C IQD S+G LIG+GRR GNLY+L
Sbjct: 424 LVLEHVLYIPTFQFNLISISALTQTNCFSFDFTAHFCFIQDHSQGKLIGMGRRQGNLYLL 483

Query: 392 D 394
           D
Sbjct: 484 D 484


>dbj|BAD43406.1| hypothetical protein [Arabidopsis thaliana]
          Length = 161

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 36/68 (52%), Positives = 45/68 (66%)
 Frame = +2

Query: 212 IYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVL 391
           I LK++LF+P F  +LLSISSLT      V F    C IQD ++ + IG GRRIGNLYVL
Sbjct: 8   IVLKNILFIPEFRLSLLSISSLTSDLGSRVIFDPTCCEIQDPTRELTIGKGRRIGNLYVL 67

Query: 392 DPAQPTVS 415
           D   P++S
Sbjct: 68  DTKTPSIS 75


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/68 (50%), Positives = 44/68 (64%)
 Frame = +2

Query: 212 IYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVL 391
           I LK+VLF+P F  NL+SISSLT      V F  + C IQD  KG ++G GRR+ NLY+L
Sbjct: 481 ILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLL 540

Query: 392 DPAQPTVS 415
           D    ++S
Sbjct: 541 DVGDQSIS 548


>gb|AAC62795.1| contains similarity to retroviral aspartyl proteases (Pfam:
           rvp.hmm, score: 11.80) [Arabidopsis thaliana]
          Length = 1244

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/65 (55%), Positives = 42/65 (64%)
 Frame = +2

Query: 212 IYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVL 391
           I L++VLF+P F  NL+SISSLT      V F    C IQD +K + IG GRRIGNLYVL
Sbjct: 468 ILLRNVLFLPEFRLNLISISSLTSDIGSRVIFDPSCCEIQDLTKDLRIGRGRRIGNLYVL 527

Query: 392 DPAQP 406
           D   P
Sbjct: 528 DTTPP 532


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/61 (52%), Positives = 45/61 (73%)
 Frame = +2

Query: 212 IYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVL 391
           + L +VLFVP+F YNLLS+S+ T + ++S+ FT D C+IQ+ S+G +IG G R G LY L
Sbjct: 331 VKLLNVLFVPTFRYNLLSVSAFTDTLSLSMVFTPDACIIQEPSRGKMIGKGSRKGQLYQL 390

Query: 392 D 394
           D
Sbjct: 391 D 391


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
          Length = 1131

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/61 (55%), Positives = 39/61 (63%)
 Frame = +2

Query: 212 IYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVL 391
           I L +VL++P F  NLLSISSLT      V F    C IQD +KG  IG GRR+ NLYVL
Sbjct: 441 ITLHNVLYIPEFRLNLLSISSLTSDIGSQVIFDVSSCAIQDPTKGWTIGQGRRVANLYVL 500

Query: 392 D 394
           D
Sbjct: 501 D 501


>gb|AAD41974.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1100

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/66 (51%), Positives = 41/66 (62%)
 Frame = +2

Query: 218 LKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVLDP 397
           LK+VLF+P F  NL+SISSLT      V F    C IQD  KG ++G GRR+ NLYV+D 
Sbjct: 418 LKNVLFIPEFCLNLMSISSLTDDIGSRVIFNQHACEIQDLIKGRMLGHGRRVANLYVMDV 477

Query: 398 AQPTVS 415
               VS
Sbjct: 478 EDTNVS 483


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/61 (52%), Positives = 44/61 (72%)
 Frame = +2

Query: 212 IYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVL 391
           + L +VLFVP+F YNLLS+S+ T + ++S+ FT D C+IQ  S+G +IG G R G LY L
Sbjct: 330 VKLLNVLFVPTFRYNLLSVSAFTDTLSLSMVFTPDACIIQXPSRGKMIGKGSRKGQLYQL 389

Query: 392 D 394
           D
Sbjct: 390 D 390


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 26/61 (42%), Positives = 44/61 (72%)
 Frame = +2

Query: 212 IYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVL 391
           + L  VLF+P F +NLLS+SSLT S    + F    C++QDA++ +++G+G+++ NLY++
Sbjct: 323 LILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMGKQVANLYIV 382

Query: 392 D 394
           D
Sbjct: 383 D 383


>dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]
          Length = 556

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 32/61 (52%), Positives = 40/61 (65%)
 Frame = +2

Query: 212 IYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVL 391
           + L +VL++P F  NLL +S LT      VTF  D CLIQD  KG++IG G +I NLYVL
Sbjct: 440 LVLNNVLYIPDFRLNLLCVSQLTKDLGYRVTFDEDYCLIQDHVKGLMIGRGEQINNLYVL 499

Query: 392 D 394
           D
Sbjct: 500 D 500


>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
          Length = 1436

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/59 (47%), Positives = 44/59 (74%)
 Frame = +2

Query: 218 LKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVLD 394
           L +VLF+P F +NLLS+S LT +    V+FT D+C+IQ  +K +++G G ++GNLY+L+
Sbjct: 473 LHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYILN 531


>emb|CAN61222.1| hypothetical protein VITISV_034850 [Vitis vinifera]
          Length = 247

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/62 (51%), Positives = 44/62 (70%)
 Frame = +2

Query: 218 LKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVLDP 397
           L++VLFVP F +NLLSIS+LT  +   V+F  D  +I+D ++G  IGIGR+  NLY LD 
Sbjct: 180 LQNVLFVPQFHWNLLSISALTQQHPYVVSFHSDHYVIEDPTQGRKIGIGRQANNLYTLDL 239

Query: 398 AQ 403
           +Q
Sbjct: 240 SQ 241


>emb|CAA19696.1| putative LTR retrotransposon (fragment) [Arabidopsis thaliana]
           gi|7268775|emb|CAB78981.1| putative LTR retrotransposon
           (fragment) [Arabidopsis thaliana]
          Length = 281

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/61 (45%), Positives = 42/61 (68%)
 Frame = +2

Query: 212 IYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVL 391
           I L +VL++P F +NL+S+S LT      V+FT D+  +Q+ +K ++IG G  +GNLYVL
Sbjct: 53  ISLHNVLYIPEFKFNLISVSVLTKFLKTKVSFTSDEFFVQELTKELMIGRGSEVGNLYVL 112

Query: 392 D 394
           D
Sbjct: 113 D 113


>ref|XP_004245314.1| PREDICTED: uncharacterized protein LOC101251909 [Solanum
           lycopersicum]
          Length = 648

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/64 (46%), Positives = 39/64 (60%)
 Frame = +2

Query: 218 LKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVLDP 397
           +K VLFVP F YNLLS+S LT     +V F  D C+ QD   G ++GIG+    LY+L+ 
Sbjct: 489 VKDVLFVPEFKYNLLSVSQLTKQLRCTVVFFPDFCIFQDLFNGRVLGIGKENQGLYILNT 548

Query: 398 AQPT 409
           A  T
Sbjct: 549 AATT 552


>emb|CBI24911.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/62 (51%), Positives = 43/62 (69%)
 Frame = +2

Query: 218 LKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVLDP 397
           L++VLFVP F  NLLSIS+LT  +   V+F  D  +I+D ++G  IGIGR+  NLY LD 
Sbjct: 292 LQNVLFVPQFHCNLLSISALTQQHPYVVSFHSDHYVIEDPTQGRKIGIGRQANNLYTLDL 351

Query: 398 AQ 403
           +Q
Sbjct: 352 SQ 353


>ref|XP_002278097.1| PREDICTED: uncharacterized protein LOC100260149 [Vitis vinifera]
          Length = 359

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/62 (51%), Positives = 43/62 (69%)
 Frame = +2

Query: 218 LKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVLDP 397
           L++VLFVP F  NLLSIS+LT  +   V+F  D  +I+D ++G  IGIGR+  NLY LD 
Sbjct: 292 LQNVLFVPQFHCNLLSISALTQQHPYVVSFHSDHYVIEDPTQGRKIGIGRQANNLYTLDL 351

Query: 398 AQ 403
           +Q
Sbjct: 352 SQ 353


>gb|ABW74573.1| putative pol polyprotein [Boechera divaricarpa]
          Length = 937

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/61 (50%), Positives = 39/61 (63%)
 Frame = +2

Query: 212 IYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRIGNLYVL 391
           I L++VLF+P F  NL+S+SSL       V F    C IQD  KG++I  GRR+ NLYVL
Sbjct: 402 ILLRNVLFIPEFRLNLISVSSLNDDLGSRVIFDPASCEIQDRIKGLMIEKGRRVANLYVL 461

Query: 392 D 394
           D
Sbjct: 462 D 462


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
           gi|7268152|emb|CAB78488.1| retrovirus-related like
           polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/67 (44%), Positives = 44/67 (65%)
 Frame = +2

Query: 194 VFVPFPIYLKSVLFVPSFSYNLLSISSLTFSNNVSVTFTYDKCLIQDASKGMLIGIGRRI 373
           V +   + L +VL VP F +NL+S+SSL  + + S  F  D CLIQ+ S+G++IG GR  
Sbjct: 509 VHITQKLILHNVLHVPDFKFNLMSVSSLVKTISCSAHFYVDCCLIQELSQGLMIGRGRLY 568

Query: 374 GNLYVLD 394
            NLY+L+
Sbjct: 569 HNLYILE 575