BLASTX nr result

ID: Mentha29_contig00035826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00035826
         (209 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO52746.1| LIPLESS1 [Antirrhinum majus]                            43   2e-08
ref|XP_007155905.1| hypothetical protein PHAVU_003G241900g [Phas...    46   2e-06
gb|EYU34566.1| hypothetical protein MIMGU_mgv1a006962mg [Mimulus...    44   6e-06

>gb|AAO52746.1| LIPLESS1 [Antirrhinum majus]
          Length = 505

 Score = 42.7 bits (99), Expect(2) = 2e-08
 Identities = 23/35 (65%), Positives = 26/35 (74%)
 Frame = +3

Query: 6   KRSSKIFGFSVNQGNYDDNDDELGPCSPPVTR*FF 110
           KRSSKIFGFSV   + DD++DE G  S PVTR FF
Sbjct: 49  KRSSKIFGFSV--AHNDDDEDETGNISSPVTRQFF 81



 Score = 41.6 bits (96), Expect(2) = 2e-08
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = +2

Query: 140 GIPQAHWVDVKFCQSDPRNAIFG 208
           G P+AHWV VKFCQSDP  A+ G
Sbjct: 95  GPPRAHWVGVKFCQSDPNGAVLG 117


>ref|XP_007155905.1| hypothetical protein PHAVU_003G241900g [Phaseolus vulgaris]
           gi|561029259|gb|ESW27899.1| hypothetical protein
           PHAVU_003G241900g [Phaseolus vulgaris]
          Length = 517

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 30/56 (53%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
 Frame = +3

Query: 3   KKRSSKIFGFSVNQGNYDDNDDELGPCSPPVTR*FFLSEMA------SGGMPEFPR 152
           KKRSSKIFGFSV Q +Y+  D +     PPVTR FF  E A       GG P FPR
Sbjct: 74  KKRSSKIFGFSVTQ-DYESMDSD----HPPVTRQFFPVEEADVAVASGGGSPTFPR 124



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 146 PQAHWVDVKFCQSDPRNA 199
           P+AHWV VKFCQS+   A
Sbjct: 123 PRAHWVGVKFCQSEALGA 140


>gb|EYU34566.1| hypothetical protein MIMGU_mgv1a006962mg [Mimulus guttatus]
          Length = 424

 Score = 43.9 bits (102), Expect(2) = 6e-06
 Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
 Frame = +3

Query: 3   KKRSSKIFGFSVNQGNYDDNDDELGPCSPPVTR*FFL---SEMA--SGGMPEFPR 152
           +KRSS+IFGFSV+ G   D+DD+  P   PVT  FF     EMA   GG  +FPR
Sbjct: 56  RKRSSRIFGFSVHDGG--DDDDDRAPGLSPVTHQFFPVEGPEMAGGGGGPADFPR 108



 Score = 31.6 bits (70), Expect(2) = 6e-06
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +2

Query: 137 AGIPQAHWVDVKFCQS 184
           A  P+AHWV VKFCQS
Sbjct: 104 ADFPRAHWVGVKFCQS 119


Top