BLASTX nr result

ID: Mentha29_contig00035799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00035799
         (323 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS57236.1| hypothetical protein M569_17584, partial [Genlise...    64   2e-08
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s...    63   5e-08
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s...    63   5e-08

>gb|EPS57236.1| hypothetical protein M569_17584, partial [Genlisea aurea]
          Length = 188

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = +1

Query: 202 QVIRFTELSRENVVNCLRVLIHQNCVQAFTIEHEGAPK 315
           Q+IR TEL+R++VVNCLRVLIHQNCVQAF I+ EG P+
Sbjct: 18  QIIRSTELNRQSVVNCLRVLIHQNCVQAFAIQEEGQPR 55


>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like
           [Solanum tuberosum]
          Length = 525

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +1

Query: 97  MVSAHGAALATHVVSSFYGDXXXXXXXXXXXXXX---VQVIRFTELSRENVVNCLRVLIH 267
           MVS HG  LA +++SS++GD                  QV+  TEL+R NV NCL VLIH
Sbjct: 1   MVSPHGIKLAVYLISSYFGDLNAKVCDCLLRRGTQTLYQVVSSTELTRTNVKNCLLVLIH 60

Query: 268 QNCVQAFTIEHEG 306
            NCVQAF ++  G
Sbjct: 61  HNCVQAFALQQPG 73


>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like
           [Solanum lycopersicum]
          Length = 525

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +1

Query: 97  MVSAHGAALATHVVSSFYGDXXXXXXXXXXXXXXV---QVIRFTELSRENVVNCLRVLIH 267
           MVS HG  LA +++SS++G+                  QV+  TELSR+NV NCL VLIH
Sbjct: 1   MVSPHGIKLAVYLISSYFGELNAKVCDCLLRRGTQTLHQVVSSTELSRKNVKNCLLVLIH 60

Query: 268 QNCVQAFTIEHEG 306
            NCVQAF I   G
Sbjct: 61  HNCVQAFAIRQPG 73


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