BLASTX nr result

ID: Mentha29_contig00035528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00035528
         (329 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886200.1| predicted protein [Arabidopsis lyrata subsp....    60   3e-07
ref|XP_002876511.1| predicted protein [Arabidopsis lyrata subsp....    60   3e-07
ref|XP_003592631.1| Replication factor A protein [Medicago trunc...    57   3e-06
ref|XP_002885527.1| predicted protein [Arabidopsis lyrata subsp....    57   4e-06
ref|XP_002874770.1| predicted protein [Arabidopsis lyrata subsp....    57   4e-06
ref|XP_003622756.1| hypothetical protein MTR_7g051840 [Medicago ...    56   5e-06

>ref|XP_002886200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332040|gb|EFH62459.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = +1

Query: 10  IHATMDRNLISKFKHLLKEDHTYKIKNFVVMPNNNKYKTTSRMYYIKLISSTLLA--PMS 183
           IHAT+ +  ++KF+ L+       ++NF V  +  KY+ T   + + L+++T ++  P  
Sbjct: 51  IHATIKKQQVNKFQRLITTGEWRTVENFTVAKSTGKYRPTRLPFKMTLMNTTAISRIPSI 110

Query: 184 PEEFFPRYYFDFKSFEDILSIQNVNESCLFGK 279
            EEF    YFDF +F DIL++  +NE+ L G+
Sbjct: 111 SEEF----YFDFANFPDILNVNGLNENILIGE 138


>ref|XP_002876511.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322349|gb|EFH52770.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 301

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = +1

Query: 10  IHATMDRNLISKFKHLLKEDHTYKIKNFVVMPNNNKYKTTSRMYYIKLISSTLLA--PMS 183
           IHAT+ +  ++KF+ L+       ++NF V  +  KY+ T   + + L+++T ++  P  
Sbjct: 51  IHATIKKQQVNKFQRLITTGEWRTVENFTVAKSTGKYRPTRLPFKMTLMNTTAISRIPSI 110

Query: 184 PEEFFPRYYFDFKSFEDILSIQNVNESCLFGK 279
            EEF    YFDF +F DIL++  +NE+ L G+
Sbjct: 111 SEEF----YFDFANFPDILNVNGLNENILIGE 138


>ref|XP_003592631.1| Replication factor A protein [Medicago truncatula]
           gi|355481679|gb|AES62882.1| Replication factor A protein
           [Medicago truncatula]
          Length = 301

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +1

Query: 7   RIHATMDRNLISKFKHLLKEDHTYKIKNFVVMPNNNKYKTTSRMYYIKLI-SSTLLAPMS 183
           RIHAT  ++L++KF+ +++E  TY+++N +V  N + YK TS  + +K++ +ST     S
Sbjct: 45  RIHATARKDLVAKFRSMVQEGGTYQLENAIVGFNESPYKVTSHKHKLKMMHNSTFTKVHS 104

Query: 184 PEEFFPRYYFDFKSFEDILS 243
           P    P   F FK F +ILS
Sbjct: 105 PS--IPMNVFKFKPFNEILS 122


>ref|XP_002885527.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331367|gb|EFH61786.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 146

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/89 (31%), Positives = 51/89 (57%)
 Frame = +1

Query: 10  IHATMDRNLISKFKHLLKEDHTYKIKNFVVMPNNNKYKTTSRMYYIKLISSTLLAPMSPE 189
           IHAT+ +  ++KF+ L+       ++NF V  +  KY+ TS  + + L+++T ++ +   
Sbjct: 51  IHATVKKQQVNKFQKLITTGEWRTVENFTVAKSTGKYRPTSLPFKMTLMNTTAISRI--P 108

Query: 190 EFFPRYYFDFKSFEDILSIQNVNESCLFG 276
                 YFDF +F DIL++  +NE+ L G
Sbjct: 109 SISDDLYFDFANFPDILNVNGLNENILIG 137


>ref|XP_002874770.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320607|gb|EFH51029.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 153

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/89 (31%), Positives = 51/89 (57%)
 Frame = +1

Query: 10  IHATMDRNLISKFKHLLKEDHTYKIKNFVVMPNNNKYKTTSRMYYIKLISSTLLAPMSPE 189
           IHAT+ +  ++KF+ L+       ++NF V  +  KY+ TS  + + L+++T ++ +   
Sbjct: 58  IHATVKKQQVNKFQKLITTGEWRTVENFTVAKSTGKYRPTSLPFKMTLMNTTAISRI--P 115

Query: 190 EFFPRYYFDFKSFEDILSIQNVNESCLFG 276
                 YFDF +F DIL++  +NE+ L G
Sbjct: 116 SISDDLYFDFANFPDILNVNGLNENILIG 144


>ref|XP_003622756.1| hypothetical protein MTR_7g051840 [Medicago truncatula]
           gi|355497771|gb|AES78974.1| hypothetical protein
           MTR_7g051840 [Medicago truncatula]
          Length = 252

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/81 (38%), Positives = 48/81 (59%)
 Frame = +1

Query: 7   RIHATMDRNLISKFKHLLKEDHTYKIKNFVVMPNNNKYKTTSRMYYIKLISSTLLAPMSP 186
           +I AT  ++LIS  K  + E  TY+ +N +V  N+ KY+TTS  Y + L+ +T    M  
Sbjct: 137 KIQATTKKSLISSVKTKVAEGATYEFENVLVTHNDPKYQTTSHRYKLNLLPNTSW-KMLD 195

Query: 187 EEFFPRYYFDFKSFEDILSIQ 249
           E   P  +FDF +F+DIL+ +
Sbjct: 196 ENVIPVNHFDFANFKDILAAE 216


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