BLASTX nr result

ID: Mentha29_contig00033725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00033725
         (311 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like p...    65   1e-08
dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606...    61   1e-07
ref|XP_003622970.1| Pantothenate synthetase [Medicago truncatula...    57   3e-06

>gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like protein, related
           [Medicago truncatula]
          Length = 196

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/100 (33%), Positives = 48/100 (48%)
 Frame = -3

Query: 309 DQVCCLCGTEAKTLDHLFFDCEVARAIWRGVTEWCEISKQLING*LRRNFLCLSAQQIVV 130
           DQVC LC  E +T  HLFF C+ A A+W+GV  W  ++    N      ++         
Sbjct: 75  DQVCVLCTKENETHSHLFFSCDYADAVWKGVMRWMNMTVNTSNWHSILQYIQSHCNSNNG 134

Query: 129 SKDLYRCA*TIMVYHIWKERNQRRMQGKQSSVDDIIKECK 10
               +R   +  +Y IWKERN R+ Q    SV  ++ + K
Sbjct: 135 MHQAHRMVLSETLYVIWKERNDRKFQNCYRSVQQLLNQIK 174


>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
           orf147a [Beta vulgaris subsp. vulgaris]
          Length = 147

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/97 (35%), Positives = 49/97 (50%)
 Frame = -3

Query: 309 DQVCCLCGTEAKTLDHLFFDCEVARAIWRGVTEWCEISKQLING*LRRNFLCLSAQQIVV 130
           DQ+C LCG   +T DHLFF CE +  IW  +  W  I  Q   G  +        Q    
Sbjct: 40  DQLCVLCGNVDETRDHLFFVCEFSYEIWSSLLCWLGI--QRTAGDWQGVLQSAHCQSNSS 97

Query: 129 SKDLYRCA*TIMVYHIWKERNQRRMQGKQSSVDDIIK 19
           +  ++R   +I VY IW+ERN R+ Q  +   D+I++
Sbjct: 98  ASCIFRMCISIAVYFIWRERNARKFQQVKMKPDEIVR 134


>ref|XP_003622970.1| Pantothenate synthetase [Medicago truncatula]
           gi|355497985|gb|AES79188.1| Pantothenate synthetase
           [Medicago truncatula]
          Length = 551

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
 Frame = -3

Query: 300 CCLCGTEAKTLDHLFFDCEVARAIWRGVTEWCEISKQLING*LRRNFLCLSAQQIVVSKD 121
           C LCG   ++  HLF  CEVA  IWRGV  W ++     N  L  +F   + +    SK 
Sbjct: 295 CVLCGQREESSTHLFLHCEVAAKIWRGVLNWLDMFITPQN--LYVHFESWNGE--ATSKR 350

Query: 120 L---YRCA*TIMVYHIWKERNQRRMQGKQSSVDDIIKECKFL 4
           L   +R      ++ IWKERN +  + +   VD+II E K L
Sbjct: 351 LLKGFRLIWHATIWLIWKERNAKIFKNQFKEVDEIIDEIKVL 392


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