BLASTX nr result
ID: Mentha29_contig00031366
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00031366
(357 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I... 123 3e-26
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil... 117 1e-24
ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, I... 117 1e-24
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I... 116 4e-24
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 115 5e-24
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, I... 115 5e-24
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin... 115 6e-24
gb|EPS66115.1| hypothetical protein M569_08662, partial [Genlise... 114 1e-23
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun... 114 1e-23
gb|AFK41303.1| unknown [Medicago truncatula] 113 2e-23
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ... 113 2e-23
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 113 2e-23
ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, I... 113 3e-23
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun... 112 4e-23
ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Caps... 112 5e-23
ref|XP_004143184.1| PREDICTED: DNA-directed RNA polymerases I, I... 112 5e-23
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin... 112 5e-23
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ... 112 7e-23
ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutr... 111 9e-23
ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ri... 111 1e-22
>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
Length = 207
Score = 123 bits (308), Expect = 3e-26
Identities = 63/110 (57%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
MV SEEE RL++IRKT+ ++LRDRGY V D E+DMT +QF +K+ ENMKRED++I KSK
Sbjct: 1 MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60
Query: 210 R-DGSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
R D S+QIYVFF +E ++GIKP+K +MK NV+RAI+V + LT
Sbjct: 61 RNDSSDQIYVFFPEEA---KVGIKPLKTYTTRMKSENVFRAILVVQQNLT 107
>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 206
Score = 117 bits (294), Expect = 1e-24
Identities = 59/110 (53%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
MV S++E KRL++IRKT++++L+DRGY V D E+ MT QF K+ ENMKREDL+I K+K
Sbjct: 1 MVLSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTK 60
Query: 210 R-DGSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
R D S+QIYVFF DE ++G+K +K N+MK NV+RA++V + LT
Sbjct: 61 RNDNSDQIYVFFPDEA---KVGVKTMKTYTNRMKSENVFRAVLVVQQNLT 107
>ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
Length = 208
Score = 117 bits (294), Expect = 1e-24
Identities = 60/110 (54%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
MV SEEE RL++IRKT+ ++LRDRGY V D E+DMT +QF +K+ ENMKRED++I KSK
Sbjct: 1 MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60
Query: 210 R-DGSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
R D S+Q+Y+ F E + ++GIKP+K +MK NV+RAI+V + LT
Sbjct: 61 RNDSSDQVYICFFPE--EAKVGIKPLKTYTTRMKSENVFRAILVVQQNLT 108
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1 isoform 1 [Vitis vinifera]
gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1 isoform 2
[Vitis vinifera]
Length = 206
Score = 116 bits (290), Expect = 4e-24
Identities = 60/110 (54%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
M SEEE RL++IRKT++++L+DRGY V D E++MT QF KF ENMKREDL+I K+K
Sbjct: 1 MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60
Query: 210 R-DGSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
R D S+QIYVFF +E ++G+K +K N+MK NV+RAI+V + LT
Sbjct: 61 RTDSSDQIYVFFPEE---QKVGVKTMKTYTNRMKSENVFRAILVVQQNLT 107
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 115 bits (289), Expect = 5e-24
Identities = 59/110 (53%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
M S+EE KRL++IR+T++++LRDRGY V D E++M+ +QF KF ENMKREDL+I K+
Sbjct: 1 MTLSDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKAL 60
Query: 210 R-DGSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
R D S+QIYVFF DE ++G+K +K N+MK NV+RAI+V + LT
Sbjct: 61 RNDSSDQIYVFFPDE---QKVGVKTMKTYTNRMKSENVFRAILVVQQNLT 107
>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 206
Score = 115 bits (289), Expect = 5e-24
Identities = 61/110 (55%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
M F EEE RLY+IRKT++E+LRDR Y+V D E++M+ QF EK+ ENMKREDL+I K+K
Sbjct: 1 MGFPEEEITRLYRIRKTVMEMLRDRNYLVGDFEINMSKHQFKEKYGENMKREDLVINKTK 60
Query: 210 RD-GSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
+D S+QIYVFF +E ++G+K +K IN+M NVYRAI+V LT
Sbjct: 61 KDKPSDQIYVFFPEE---VKVGVKTMKTYINRMNSENVYRAILVCQTSLT 107
>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
gi|255625665|gb|ACU13177.1| unknown [Glycine max]
Length = 206
Score = 115 bits (288), Expect = 6e-24
Identities = 59/110 (53%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
MV SEEE RLY+IRKT++++LRDRG++V D E++M+ +F K+ E+MKREDL+I KSK
Sbjct: 1 MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 210 RDGS-EQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
+D S +QIYVFF DE ++G+K +K N+M NVYRAI+V LT
Sbjct: 61 KDNSGDQIYVFFPDE---PKVGVKTMKTYTNRMNSENVYRAILVTQTNLT 107
>gb|EPS66115.1| hypothetical protein M569_08662, partial [Genlisea aurea]
Length = 208
Score = 114 bits (285), Expect = 1e-23
Identities = 57/111 (51%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
Frame = +3
Query: 27 KMVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKS 206
+M+ SEE+ RLY+IRKTL+++L+DRGYIV D E++MT QF +K+ ENMKRED + K
Sbjct: 1 RMILSEEQITRLYRIRKTLMQMLKDRGYIVGDFEIEMTKSQFIQKYGENMKREDQTVLKG 60
Query: 207 KRDG-SEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
R+ S+QIYVFF +E ++G+KPIK N+MKE +++AI+V + LT
Sbjct: 61 LRNNPSDQIYVFFPEE---PKVGVKPIKAYTNKMKEEGIHKAILVVQQNLT 108
>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
gi|462414880|gb|EMJ19617.1| hypothetical protein
PRUPE_ppa011542mg [Prunus persica]
Length = 206
Score = 114 bits (285), Expect = 1e-23
Identities = 57/110 (51%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
MV+ EEE RLY++RKT++++L+DR Y+V D E++MT +QF K+ ENMKREDL I K+K
Sbjct: 1 MVYPEEEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTK 60
Query: 210 R-DGSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
R D S+QIYVFF +E ++G+K +K N+MK NV RA++V + LT
Sbjct: 61 RSDSSDQIYVFFPEE---PKVGVKTMKTYTNRMKSENVLRAVLVTQQNLT 107
>gb|AFK41303.1| unknown [Medicago truncatula]
Length = 206
Score = 113 bits (283), Expect = 2e-23
Identities = 58/110 (52%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
MVFSEEE RLY+IRKT++++L+DR Y+V D E++M+ F +K+ ENMKREDL+I K+K
Sbjct: 1 MVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTK 60
Query: 210 RD-GSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
+D S+QIYVFF +E ++G+K +K N+M NVYRAI+V LT
Sbjct: 61 KDKPSDQIYVFFPEEA---KVGVKTMKTYTNRMNSENVYRAILVCQTSLT 107
>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Medicago truncatula] gi|355511987|gb|AES93610.1|
DNA-directed RNA polymerases I, II, and III subunit
RPABC1 [Medicago truncatula]
Length = 410
Score = 113 bits (283), Expect = 2e-23
Identities = 58/110 (52%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
MVFSEEE RLY+IRKT++++L+DR Y+V D E++M+ F +K+ ENMKREDL+I K+K
Sbjct: 205 MVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTK 264
Query: 210 RD-GSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
+D S+QIYVFF +E ++G+K +K N+M NVYRAI+V LT
Sbjct: 265 KDKPSDQIYVFFPEEA---KVGVKTMKTYTNRMNSENVYRAILVCQTSLT 311
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 113 bits (283), Expect = 2e-23
Identities = 58/110 (52%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
M +EEE KRL +IRKT++++L+DRGY V D E+ MT +QF K+ NMKREDL+I K+K
Sbjct: 1 MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60
Query: 210 R-DGSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
R D S+QIYVFF +E ++G+K +K N+MK NV+RAI+V + LT
Sbjct: 61 RNDSSDQIYVFFPEEA---KVGVKTMKTYTNRMKSENVFRAILVVQQNLT 107
>ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 206
Score = 113 bits (282), Expect = 3e-23
Identities = 60/110 (54%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
MVF EEE RLY+IRKT++ +LRDR Y+V D EV+M+ +F EK+ ENMKREDL+I K+K
Sbjct: 1 MVFPEEEITRLYRIRKTVMVMLRDRNYLVGDFEVNMSKHEFKEKYGENMKREDLVINKTK 60
Query: 210 RD-GSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
+D S+QIYVFF +E ++G+K +K N+M NVYRAI+V LT
Sbjct: 61 KDKPSDQIYVFFPEE---VKVGVKTMKTYTNRMNSENVYRAILVCQTSLT 107
>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 112 bits (281), Expect = 4e-23
Identities = 57/110 (51%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
MV SE+E RL++IR+T++++LRDR Y+V D E++MT +QF K+ ENMKREDL+I KS+
Sbjct: 1 MVLSEDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSR 60
Query: 210 R-DGSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
R D +QIYVFF +E ++G+K +K IN+MK NV RA++V + LT
Sbjct: 61 RNDSPDQIYVFFPEE---QKVGVKTMKTYINRMKSENVLRAVLVVQQNLT 107
>ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Capsella rubella]
gi|482567281|gb|EOA31470.1| hypothetical protein
CARUB_v10014656mg [Capsella rubella]
Length = 205
Score = 112 bits (280), Expect = 5e-23
Identities = 55/109 (50%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Frame = +3
Query: 33 VFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSKR 212
+ +EEE KRLY+I KTL+++L+DRGY + D E+ +T +QF K+ +NMKREDL+ K+KR
Sbjct: 1 MLTEEEIKRLYRIHKTLMQMLKDRGYFIADSEITITKQQFIRKYGDNMKREDLVTLKAKR 60
Query: 213 -DGSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
D S+Q+Y+FF DE ++G+K +K N+MK NVYRAI+V + LT
Sbjct: 61 NDNSDQLYIFFPDEA---KVGVKTMKMYTNRMKSENVYRAILVVQQNLT 106
>ref|XP_004143184.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
gi|449524595|ref|XP_004169307.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
[Cucumis sativus]
Length = 207
Score = 112 bits (280), Expect = 5e-23
Identities = 57/104 (54%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
MVF EEE +L+++RKT+L++L+DRGY V D E+DM+ QF KF ENMKREDL+I KSK
Sbjct: 1 MVFPEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKVQFKNKFGENMKREDLVINKSK 60
Query: 210 R-DGSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIV 338
R + S+QIYVFF +E ++GIK ++ + +MK NV+RAI V
Sbjct: 61 RNNSSDQIYVFFPEE---PKVGIKIVETYVGRMKSENVFRAIFV 101
>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
gi|255627545|gb|ACU14117.1| unknown [Glycine max]
Length = 206
Score = 112 bits (280), Expect = 5e-23
Identities = 58/110 (52%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
MV SEEE RLY+IRKT++++LRDR ++V D E++M+ +F K+ E+MKREDL+I KSK
Sbjct: 1 MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 210 RDGS-EQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
+D S +QIYVFF DE ++G+K +K N+M NVYRAI+V LT
Sbjct: 61 KDNSGDQIYVFFPDE---PKVGVKTMKTYTNRMNSENVYRAILVTQTNLT 107
>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
Full=DNA-directed RNA polymerases II and IV subunit 5A;
Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
II subunit E; AltName: Full=RNA polymerase I, II and III
24.3 kDa subunit; Short=AtRPB24.3
gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
[Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
NRPB5 [Arabidopsis thaliana]
Length = 205
Score = 112 bits (279), Expect = 7e-23
Identities = 56/109 (51%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Frame = +3
Query: 33 VFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSKR 212
+ +EEE KRLY+I+KTL+++LRDRGY + D E+ MT +QF K +NMKREDL+ K+KR
Sbjct: 1 MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKR 60
Query: 213 -DGSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
D S+Q+Y+FF DE ++G+K +K N+MK NV+RAI+V + LT
Sbjct: 61 NDNSDQLYIFFPDEA---KVGVKTMKMYTNRMKSENVFRAILVVQQNLT 106
>ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutrema salsugineum]
gi|557107329|gb|ESQ47636.1| hypothetical protein
EUTSA_v10021534mg [Eutrema salsugineum]
Length = 206
Score = 111 bits (278), Expect = 9e-23
Identities = 55/110 (50%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
M +EEE KRLY+I+KTL+++L+DRGY + D E+ MT QF K +NMKREDL+ K+K
Sbjct: 1 MTLTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMTLGQFIRKHGDNMKREDLVTLKAK 60
Query: 210 R-DGSEQIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRAIIVGTKVLT 356
R D ++Q+Y+FF DE ++G+K +K N+MK NV+RAI+V + LT
Sbjct: 61 RNDNNDQLYIFFPDEA---KVGVKTMKMYTNRMKSENVFRAILVVQQNLT 107
>ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223546721|gb|EEF48219.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 225
Score = 111 bits (277), Expect = 1e-22
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 20/129 (15%)
Frame = +3
Query: 30 MVFSEEERKRLYKIRKTLLEILRDRGYIVTDVEVDMTFKQFTEKFSENMKREDLMITKSK 209
M SE+E KRL++IR+T++++L+DR Y+VTD E+++T QFT K+ +NMKREDL+I KSK
Sbjct: 1 MTLSEDEIKRLFRIRRTVMQMLKDRTYLVTDSEINITKHQFTSKYGDNMKREDLVIHKSK 60
Query: 210 RDGSE--------------------QIYVFFSDEGDKDRIGIKPIKNIINQMKESNVYRA 329
RDGS+ QIYVFF +E ++G+K +K N+MK NV+RA
Sbjct: 61 RDGSDSFYPTKLLFLNQLEAWLPLYQIYVFFPEE---QKVGVKTMKTYTNRMKSENVFRA 117
Query: 330 IIVGTKVLT 356
I+V + LT
Sbjct: 118 ILVVQQSLT 126