BLASTX nr result
ID: Mentha29_contig00031146
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00031146
(258 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris] 72 5e-11
gb|AAP52706.2| retrotransposon protein, putative, Ty3-gypsy subc... 62 5e-11
gb|AAL86511.1|AC099040_15 putative polyprotein [Oryza sativa Jap... 62 5e-11
gb|ABB47013.1| retrotransposon protein, putative, Ty3-gypsy subc... 61 5e-11
gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subc... 61 1e-10
emb|CAD39384.2| OSJNBb0016B03.14 [Oryza sativa Japonica Group] 62 1e-10
emb|CAH66249.1| OSIGBa0101A01.5 [Oryza sativa Indica Group] 61 2e-10
gb|AAO73257.1| putative polyprotein [Oryza sativa Japonica Group... 62 2e-10
emb|CAH67763.1| H0124E07.10 [Oryza sativa Indica Group] 61 2e-10
gb|AAO37471.1| putative polyprotein [Oryza sativa Japonica Group... 61 2e-10
gb|AAO23092.1| putative polyprotein [Oryza sativa Japonica Group... 61 2e-10
gb|AAO37464.1| putative polyprotein [Oryza sativa Japonica Group] 62 2e-10
gb|ABF96986.1| retrotransposon protein, putative, Ty3-gypsy subc... 62 2e-10
gb|AAM74390.1|AC119149_5 Putative retroelement [Oryza sativa Jap... 61 3e-10
gb|ABB47124.1| retrotransposon protein, putative, Ty3-gypsy subc... 61 3e-10
emb|CAD40450.2| OSJNBa0041M21.8 [Oryza sativa Japonica Group] gi... 60 3e-10
gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subc... 61 4e-10
gb|AAP44597.1| putative polyprotein [Oryza sativa Japonica Group] 61 4e-10
emb|CAE03827.1| OSJNBb0013J13.4 [Oryza sativa Japonica Group] 60 5e-10
gb|AAK92597.1|AC078944_8 Putative retroelement [Oryza sativa Jap... 59 5e-10
>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1859
Score = 72.0 bits (175), Expect(2) = 5e-11
Identities = 28/49 (57%), Positives = 39/49 (79%)
Frame = -3
Query: 217 LTFWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQFVD 71
+ ++ KW+EAEPL IT++N +FVWKNIVCRFG+P I+++DN QF D
Sbjct: 1603 IDYFTKWIEAEPLTAITARNVQSFVWKNIVCRFGLPQIIITDNGRQFTD 1651
Score = 20.8 bits (42), Expect(2) = 5e-11
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 48 HIQQKFTSVAHPQAN 4
HI+ +SV HPQ N
Sbjct: 1662 HIKHITSSVEHPQTN 1676
>gb|AAP52706.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1735
Score = 62.0 bits (149), Expect(2) = 5e-11
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQFVDN 68
++ +W+EAEPL ITS FVWKNIVCRFG+P ++DN QF N
Sbjct: 1484 YFSRWIEAEPLGAITSAAVQKFVWKNIVCRFGVPKEFITDNGKQFDSN 1531
Score = 30.8 bits (68), Expect(2) = 5e-11
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ KF SVAHPQ+N
Sbjct: 1533 FREMCEGLNLEIKFVSVAHPQSN 1555
>gb|AAL86511.1|AC099040_15 putative polyprotein [Oryza sativa Japonica Group]
Length = 1722
Score = 62.0 bits (149), Expect(2) = 5e-11
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQFVDN 68
++ +W+EAEPL ITS FVWKNIVCRFG+P ++DN QF N
Sbjct: 1471 YFSRWIEAEPLGAITSAAVQKFVWKNIVCRFGVPKEFITDNGKQFDSN 1518
Score = 30.8 bits (68), Expect(2) = 5e-11
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ KF SVAHPQ+N
Sbjct: 1520 FREMCEGLNLEIKFVSVAHPQSN 1542
>gb|ABB47013.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1475
Score = 61.2 bits (147), Expect(2) = 5e-11
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +W+EAEPL ITS FVWKNI+CRFG+P +++DN QF
Sbjct: 1224 YFSRWIEAEPLGAITSAAVQKFVWKNIICRFGVPKEIITDNGKQF 1268
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ +FTSVAHPQ+N
Sbjct: 1273 FREMCEGLNLEIRFTSVAHPQSN 1295
>gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1412
Score = 61.2 bits (147), Expect(2) = 1e-10
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = -3
Query: 217 LTFWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
+ ++ +W+EAEPL ITS FVWKNIVCRFG+P ++DN QF
Sbjct: 1159 IEYFSRWIEAEPLGAITSAAVQKFVWKNIVCRFGVPKEFITDNGKQF 1205
Score = 30.0 bits (66), Expect(2) = 1e-10
Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE C+ +++ +FTSVAHPQ+N
Sbjct: 1210 FREMCKGLNLEIRFTSVAHPQSN 1232
>emb|CAD39384.2| OSJNBb0016B03.14 [Oryza sativa Japonica Group]
Length = 1323
Score = 61.6 bits (148), Expect(2) = 1e-10
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +W+EAEPL ITS FVWKNIVCRFG+P ++DN QF
Sbjct: 1099 YFSRWIEAEPLGAITSATVQKFVWKNIVCRFGVPKEFITDNGKQF 1143
Score = 29.6 bits (65), Expect(2) = 1e-10
Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ +F SVAHPQ+N
Sbjct: 1148 FREMCEGLNLEIRFASVAHPQSN 1170
>emb|CAH66249.1| OSIGBa0101A01.5 [Oryza sativa Indica Group]
Length = 1321
Score = 61.2 bits (147), Expect(2) = 2e-10
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +W+EAEPL ITS FVWKNI+CRFG+P ++DN QF
Sbjct: 1070 YFSRWIEAEPLGAITSATVQKFVWKNIICRFGVPKEFITDNGKQF 1114
Score = 29.6 bits (65), Expect(2) = 2e-10
Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ +F SVAHPQ+N
Sbjct: 1119 FREMCEGLNLEIRFASVAHPQSN 1141
>gb|AAO73257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108709211|gb|ABF97006.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 388
Score = 62.0 bits (149), Expect(2) = 2e-10
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 241 NSSFSS*PLTFWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
N F+ + ++ +WVEAEPL IT+ FVWKNIVCRFG+P ++DN QF
Sbjct: 303 NYKFAIEAIEYFSRWVEAEPLGTITAAAVQKFVWKNIVCRFGVPKEFITDNGKQF 357
Score = 28.9 bits (63), Expect(2) = 2e-10
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
F+E CE ++Q +F SVAHPQ N
Sbjct: 362 FKEMCEGLNLQIRFASVAHPQLN 384
>emb|CAH67763.1| H0124E07.10 [Oryza sativa Indica Group]
Length = 1761
Score = 61.2 bits (147), Expect(2) = 2e-10
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +W+EAEPL ITS FVWKNIVCRFG+P ++DN QF
Sbjct: 1510 YFSRWIEAEPLGTITSAAVQKFVWKNIVCRFGVPKEFITDNAKQF 1554
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ +F SVAHPQ+N
Sbjct: 1559 FREMCEGLNMEIRFASVAHPQSN 1581
>gb|AAO37471.1| putative polyprotein [Oryza sativa Japonica Group]
gi|41393196|gb|AAS01919.1| putative polyprotein [Oryza
sativa Japonica Group] gi|108709171|gb|ABF96966.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1535
Score = 60.8 bits (146), Expect(2) = 2e-10
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +W+EAEPL ITS FVWKNIVCRFG+P ++DN QF
Sbjct: 1351 YFSRWIEAEPLGAITSAAVQKFVWKNIVCRFGVPKEFITDNGKQF 1395
Score = 29.6 bits (65), Expect(2) = 2e-10
Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ +F SVAHPQ+N
Sbjct: 1400 FREMCEGLNLEIRFVSVAHPQSN 1422
>gb|AAO23092.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108709049|gb|ABF96844.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 658
Score = 60.8 bits (146), Expect(2) = 2e-10
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -3
Query: 217 LTFWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
+ ++ +W+EAEPL ITS FVWKNI+CRFG+P ++DN QF
Sbjct: 405 IEYFSRWIEAEPLGAITSAAVQKFVWKNIICRFGVPKEFITDNGKQF 451
Score = 29.6 bits (65), Expect(2) = 2e-10
Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ +F SVAHPQ+N
Sbjct: 456 FREMCEGLNLEIRFASVAHPQSN 478
>gb|AAO37464.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 311
Score = 62.4 bits (150), Expect(2) = 2e-10
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +W+EAEPLA ITS FVWKNIVCRFG+P ++DN QF
Sbjct: 65 YFSRWIEAEPLAAITSAAVQKFVWKNIVCRFGVPKEFITDNGKQF 109
Score = 28.1 bits (61), Expect(2) = 2e-10
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE C+ +++ +F SVAHPQ+N
Sbjct: 114 FREMCKGLNLEIRFASVAHPQSN 136
>gb|ABF96986.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 231
Score = 62.4 bits (150), Expect(2) = 2e-10
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +W+EAEPLA ITS FVWKNIVCRFG+P ++DN QF
Sbjct: 65 YFSRWIEAEPLAAITSAAVQKFVWKNIVCRFGVPKEFITDNGKQF 109
Score = 28.1 bits (61), Expect(2) = 2e-10
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE C+ +++ +F SVAHPQ+N
Sbjct: 114 FREMCKGLNLEIRFASVAHPQSN 136
>gb|AAM74390.1|AC119149_5 Putative retroelement [Oryza sativa Japonica Group]
Length = 1123
Score = 61.2 bits (147), Expect(2) = 3e-10
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +WVEAEPL ITS FVWKNI+CRFG+P ++DN QF
Sbjct: 872 YFSRWVEAEPLGAITSATIQKFVWKNIICRFGVPKEFITDNGKQF 916
Score = 28.9 bits (63), Expect(2) = 3e-10
Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ +FTS AHPQ+N
Sbjct: 921 FREMCEGRNLEIRFTSDAHPQSN 943
>gb|ABB47124.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 999
Score = 61.2 bits (147), Expect(2) = 3e-10
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +WVEAEPL ITS FVWKNI+CRFG+P ++DN QF
Sbjct: 748 YFSRWVEAEPLGAITSATIQKFVWKNIICRFGVPKEFITDNGKQF 792
Score = 28.9 bits (63), Expect(2) = 3e-10
Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ +FTS AHPQ+N
Sbjct: 797 FREMCEGRNLEIRFTSDAHPQSN 819
>emb|CAD40450.2| OSJNBa0041M21.8 [Oryza sativa Japonica Group]
gi|38343992|emb|CAD40357.2| OSJNBa0093P23.3 [Oryza
sativa Japonica Group] gi|116309168|emb|CAH66266.1|
OSIGBa0136B09.2 [Oryza sativa Indica Group]
Length = 598
Score = 60.5 bits (145), Expect(2) = 3e-10
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +W+EAEPL ITS FVWKNIVCRFG+P ++DN QF
Sbjct: 347 YFSRWIEAEPLGAITSAVVQKFVWKNIVCRFGVPKEFITDNGKQF 391
Score = 29.6 bits (65), Expect(2) = 3e-10
Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ +F SVAHPQ+N
Sbjct: 396 FREMCEGLNLEIRFASVAHPQSN 418
>gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1908
Score = 60.8 bits (146), Expect(2) = 4e-10
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +W+EAEPL ITS FVWKNIVCRFG+P ++DN QF
Sbjct: 1658 YFSRWIEAEPLGAITSAAVQKFVWKNIVCRFGVPKEFITDNGKQF 1702
Score = 28.9 bits (63), Expect(2) = 4e-10
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ F SVAHPQ+N
Sbjct: 1707 FREMCEGLNLEINFASVAHPQSN 1729
>gb|AAP44597.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1862
Score = 60.8 bits (146), Expect(2) = 4e-10
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +W+EAEPL ITS FVWKNIVCRFG+P ++DN QF
Sbjct: 1612 YFSRWIEAEPLGAITSAAVQKFVWKNIVCRFGVPKEFITDNGKQF 1656
Score = 28.9 bits (63), Expect(2) = 4e-10
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ F SVAHPQ+N
Sbjct: 1661 FREMCEGLNLEINFASVAHPQSN 1683
>emb|CAE03827.1| OSJNBb0013J13.4 [Oryza sativa Japonica Group]
Length = 1291
Score = 60.1 bits (144), Expect(2) = 5e-10
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -3
Query: 211 FWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
++ +W+EAEPL ITS FVWKNIVCRFG+P ++DN QF
Sbjct: 1039 YFSRWIEAEPLGAITSAAVQKFVWKNIVCRFGMPKEFITDNGKQF 1083
Score = 29.3 bits (64), Expect(2) = 5e-10
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
FRE CE +++ +F S+AHPQ+N
Sbjct: 1088 FREMCEGLNLEIRFASIAHPQSN 1110
>gb|AAK92597.1|AC078944_8 Putative retroelement [Oryza sativa Japonica Group]
Length = 698
Score = 59.3 bits (142), Expect(2) = 5e-10
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = -3
Query: 217 LTFWLKWVEAEPLAKITSKNALNFVWKNIVCRFGIPHILVSDNRTQF 77
+ ++ +W+EAEPL ITS FVWKN VCRFG+P ++DN QF
Sbjct: 552 IQYFSRWIEAEPLKAITSAAVQKFVWKNFVCRFGVPKKFITDNGKQF 598
Score = 30.0 bits (66), Expect(2) = 5e-10
Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = -1
Query: 66 FREWCE--HIQQKFTSVAHPQAN 4
F+E CE +++ +FTSVAHPQ+N
Sbjct: 603 FKELCEGLNLEIRFTSVAHPQSN 625