BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00030747
         (910 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU32313.1| hypothetical protein MIMGU_mgv1a012840mg [Mimulus...   198   2e-48
emb|CBI33284.3| unnamed protein product [Vitis vinifera]              194   5e-47
ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6...   192   2e-46
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s...   191   3e-46
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s...   191   3e-46
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr...   190   6e-46
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s...   190   8e-46
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   190   8e-46
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s...   188   2e-45
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s...   188   3e-45
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s...   188   3e-45
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]                          185   2e-44
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...   185   2e-44
ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III s...   184   4e-44
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu...   183   9e-44
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor...   181   3e-43
ref|XP_006394632.1| hypothetical protein EUTSA_v10005351mg [Eutr...   181   4e-43
ref|XP_004148278.1| PREDICTED: DNA-directed RNA polymerase III s...   181   4e-43
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu...   181   5e-43
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p...   180   6e-43

>gb|EYU32313.1| hypothetical protein MIMGU_mgv1a012840mg [Mimulus guttatus]
          Length = 238

 Score =  198 bits (504), Expect = 2e-48
 Identities = 104/232 (44%), Positives = 145/232 (62%), Gaps = 3/232 (1%)
 Frame = -1

Query: 829 KRKRPGPDPAALSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSVTKAIKSLKAKNL 650
           KR+RPG D + L   E+ VLN I SK   GI  ++ K +   +  P V+K++KSL AKNL
Sbjct: 9   KRRRPGTDESGLIDSERAVLNSIKSKGNMGIWTRDIKLETN-LTDPVVSKSVKSLMAKNL 67

Query: 649 IKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLKKNKVAT 476
           IKEV +  + GKK  M   F PS +ISGG WY+ G +D E + A++  C  +L+  KV T
Sbjct: 68  IKEVVNIQNKGKKHYMSVEFEPSKEISGGEWYSNGALDKELIKAVQDMCLRFLRAQKVTT 127

Query: 475 LEAIHKFME-GKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEETCYKLP 299
           +E +H  ++  +V T    +E++  +L  MVL N ++EVKS+G G++  I +   CY++ 
Sbjct: 128 IEGVHNDLKKSRVLTFEPSREQVVDILNSMVLDNNIIEVKSSGLGDYHSIPIGTVCYRVA 187

Query: 298 NAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLDTSF 143
           + AG      P  G FASIPCG CPR  +CTPDG ISP+TCVYYTKWL+  F
Sbjct: 188 SGAGVAKGG-PKKGGFASIPCGACPRISVCTPDGPISPATCVYYTKWLNVEF 238


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  194 bits (492), Expect = 5e-47
 Identities = 110/242 (45%), Positives = 150/242 (61%), Gaps = 6/242 (2%)
 Frame = -1

Query: 859 GMSRQVAAPGKRKRPGPDPAA--LSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSV 686
           GMSR   +  KRKRP  + A+  L   E+++ ++I SKE  GI  ++ K +   +P   V
Sbjct: 61  GMSRSQGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETN-LPDNVV 119

Query: 685 TKAIKSLKAKNLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKA 512
           TK++K+L+ K LIKEV +    G+K  M   F PS +++GG WY EG +D E++  LKK 
Sbjct: 120 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKT 179

Query: 511 CSGYLKKNKVATLEAIHKFME--GKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEF 338
           C   L K KVAT E I + +   G  +TE   Q+ +A++L  +VL NE++EV+S+G GEF
Sbjct: 180 CVRVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRALVLDNEIMEVRSSGSGEF 238

Query: 337 SRIRVEETCYKLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKW 158
           S I +   CY+  N  GG     P  GA ASIPCG+CPR   CTPDG+ISP TC YYTKW
Sbjct: 239 SSIPIGAVCYRCTNK-GGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKW 297

Query: 157 LD 152
           LD
Sbjct: 298 LD 299


>ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
           [Theobroma cacao] gi|590615245|ref|XP_007023169.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao] gi|508778534|gb|EOY25790.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao] gi|508778535|gb|EOY25791.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao]
          Length = 237

 Score =  192 bits (488), Expect = 2e-46
 Identities = 105/229 (45%), Positives = 148/229 (64%), Gaps = 3/229 (1%)
 Frame = -1

Query: 829 KRKRPGPDPAALSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSVTKAIKSLKAKNL 650
           KRKRPG    +L+  E+IV +VI  K+  GI+ ++ K +I  +P   VTK +KSL AKNL
Sbjct: 11  KRKRPGATSDSLTEHERIVHDVIQGKQDMGISQRDMKREIN-LPDNLVTKCLKSLLAKNL 69

Query: 649 IKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLKKNKVAT 476
           IKEVK+  + G+K  + A F PS +I+GG WY EG +D E+++ LK+ C   +   KVAT
Sbjct: 70  IKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCWRKIYGLKVAT 129

Query: 475 LEAIHKFME-GKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEETCYKLP 299
           LE +   ++   VS   + ++++ ++++ +VL NEV+EVKS+G GEF+ I V + CYK  
Sbjct: 130 LEGVTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVKSSGTGEFASIPVGKVCYKCI 189

Query: 298 NAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLD 152
              G      P  G  ASIPCG+CP+   CTPDG+ISP TCVYY KWLD
Sbjct: 190 GKRGY--GGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWLD 236


>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  191 bits (486), Expect = 3e-46
 Identities = 109/241 (45%), Positives = 149/241 (61%), Gaps = 6/241 (2%)
 Frame = -1

Query: 856 MSRQVAAPGKRKRPGPDPAA--LSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSVT 683
           MSR   +  KRKRP  + A+  L   E+++ ++I SKE  GI  ++ K +   +P   VT
Sbjct: 1   MSRSQGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETN-LPDNVVT 59

Query: 682 KAIKSLKAKNLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKAC 509
           K++K+L+ K LIKEV +    G+K  M   F PS +++GG WY EG +D E++  LKK C
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 119

Query: 508 SGYLKKNKVATLEAIHKFME--GKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEFS 335
              L K KVAT E I + +   G  +TE   Q+ +A++L  +VL NE++EV+S+G GEFS
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRALVLDNEIMEVRSSGSGEFS 178

Query: 334 RIRVEETCYKLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWL 155
            I +   CY+  N  GG     P  GA ASIPCG+CPR   CTPDG+ISP TC YYTKWL
Sbjct: 179 SIPIGAVCYRCTNK-GGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237

Query: 154 D 152
           D
Sbjct: 238 D 238


>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           isoform 1 [Solanum lycopersicum]
           gi|460400960|ref|XP_004245998.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc6-like isoform 2 [Solanum
           lycopersicum]
          Length = 237

 Score =  191 bits (485), Expect = 3e-46
 Identities = 100/235 (42%), Positives = 139/235 (59%), Gaps = 2/235 (0%)
 Frame = -1

Query: 841 AAPGKRKRPGPDPAALSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSVTKAIKSLK 662
           AA  KRKRP      L   E +VLNV+ SK+  G+   + K +    P   V K + SL 
Sbjct: 7   AAALKRKRPDSSTQGLVDAELVVLNVVKSKKNQGVWVADVKKEANIAPA-LVDKCLTSLV 65

Query: 661 AKNLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLKKN 488
            KNLIK+V S  +  KK  M   + PS +++GG WY+EGK+D EF+  L++ C   +   
Sbjct: 66  KKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCLKVIGMM 125

Query: 487 KVATLEAIHKFMEGKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEETCY 308
           KVAT+E IH F++ +   E    +++ ++L  MVL + ++EVKSTG GE+  I +   CY
Sbjct: 126 KVATVEGIHDFLKKRKVVECCTSQQVGEILNSMVLDDSIIEVKSTGLGEYHSIPIGSVCY 185

Query: 307 KLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLDTSF 143
           ++   A G  +     G  ASIPCG CPR  +CTPDG+ISP TCVY+TKWLD  F
Sbjct: 186 RI---AVGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFTKWLDIEF 237


>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
           gi|557529238|gb|ESR40488.1| hypothetical protein
           CICLE_v10026399mg [Citrus clementina]
          Length = 233

 Score =  190 bits (483), Expect = 6e-46
 Identities = 103/232 (44%), Positives = 152/232 (65%), Gaps = 6/232 (2%)
 Frame = -1

Query: 829 KRKRPGPDPAA--LSSDEQIVLNVIMSKEGSGITDKEAKWQIKT-IPMPSVTKAIKSLKA 659
           KRKRP  +  +  L+  E+++ +VI SK+  GI  ++ K +++  +P   VTK+IKSL+ 
Sbjct: 3   KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62

Query: 658 KNLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLKKNK 485
           K+LIKEV +    GKK +M   F PS +ISGG WY+EG +D EF+  +K  C   + K K
Sbjct: 63  KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122

Query: 484 VATLEAIHKFMEGKVSTE-PVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEETCY 308
           VATLE I   ++   + +  + ++++ +++  +VL N+++EVKS G GEF+ I V + CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182

Query: 307 KLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLD 152
           K  N + G     P TG+ ASIPCG+CP+ ++C PDGVISP TCVYYTKWLD
Sbjct: 183 K--NVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWLD 232


>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Citrus sinensis]
          Length = 233

 Score =  190 bits (482), Expect = 8e-46
 Identities = 103/232 (44%), Positives = 152/232 (65%), Gaps = 6/232 (2%)
 Frame = -1

Query: 829 KRKRPGPDPAA--LSSDEQIVLNVIMSKEGSGITDKEAKWQIKT-IPMPSVTKAIKSLKA 659
           KRKRP  +  +  L+  E+++ +VI SK+  GI  ++ K +++  +P   VTK+IKSL+ 
Sbjct: 3   KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62

Query: 658 KNLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLKKNK 485
           K+LIKEV +    GKK +M   F PS +ISGG WY+EG +D EF+  +K  C   + K K
Sbjct: 63  KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122

Query: 484 VATLEAIHKFMEGKVSTE-PVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEETCY 308
           VATLE I   ++   + +  + ++++ +++  +VL N+++EVKS G GEF+ I V + CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182

Query: 307 KLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLD 152
           K  N + G     P TG+ ASIPCG+CP+ ++CTPDGVISP TCVYYT WLD
Sbjct: 183 K--NVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWLD 232


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  190 bits (482), Expect = 8e-46
 Identities = 108/241 (44%), Positives = 149/241 (61%), Gaps = 6/241 (2%)
 Frame = -1

Query: 856 MSRQVAAPGKRKRPGPDPAA--LSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSVT 683
           MSR   +  KRKRP  + A+  L   E+++ ++I SKE  GI  ++ K +   +P   VT
Sbjct: 1   MSRSQGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETN-LPDNVVT 59

Query: 682 KAIKSLKAKNLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKAC 509
           K++K+L+ K LIKEV +    G+K  M   F PS +++GG WY EG +D E++  LK+ C
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119

Query: 508 SGYLKKNKVATLEAIHKFME--GKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEFS 335
              L K KVAT E I + +   G  +TE   Q+ +A++L  +VL NE++EV+S+G GEFS
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRALVLDNEIMEVRSSGSGEFS 178

Query: 334 RIRVEETCYKLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWL 155
            I +   CY+  N  GG     P  GA ASIPCG+CPR   CTPDG+ISP TC YYTKWL
Sbjct: 179 SIPIGAVCYRCTNK-GGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237

Query: 154 D 152
           D
Sbjct: 238 D 238


>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X1 [Citrus sinensis]
          Length = 252

 Score =  188 bits (478), Expect = 2e-45
 Identities = 108/244 (44%), Positives = 157/244 (64%), Gaps = 7/244 (2%)
 Frame = -1

Query: 862 SGMSRQVAAPGKRKRPGPDPAA--LSSDEQIVLNVIMS-KEGSGITDKEAKWQIKT-IPM 695
           SGMS       KRKRP  +  +  L+  E+++ +VI S K+  GI  ++ K ++K  +P 
Sbjct: 17  SGMS-------KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPD 69

Query: 694 PSVTKAIKSLKAKNLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDAL 521
             VTK+IKSL+ K+LIKEV +  + GKK +M   F PS +ISGG WY+EG +D EF+  +
Sbjct: 70  NIVTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVV 129

Query: 520 KKACSGYLKKNKVATLEAIHKFMEGKVSTE-PVPQEELAKLLEMMVLSNEVVEVKSTGFG 344
           K  C   + K KVATLE I   ++   + +  + ++++ +++  +VL N+++EVKS G G
Sbjct: 130 KSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSG 189

Query: 343 EFSRIRVEETCYKLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYT 164
           EF+ I V + CYK  N + G     P TG+ AS+PCG+CP+ + CTPDGVISP TCVYYT
Sbjct: 190 EFTNIPVGKVCYK--NVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYT 247

Query: 163 KWLD 152
           KWLD
Sbjct: 248 KWLD 251


>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X2 [Citrus sinensis]
          Length = 234

 Score =  188 bits (477), Expect = 3e-45
 Identities = 104/233 (44%), Positives = 153/233 (65%), Gaps = 7/233 (3%)
 Frame = -1

Query: 829 KRKRPGPDPAA--LSSDEQIVLNVIMS-KEGSGITDKEAKWQIKT-IPMPSVTKAIKSLK 662
           KRKRP  +  +  L+  E+++ +VI S K+  GI  ++ K ++K  +P   VTK+IKSL+
Sbjct: 3   KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62

Query: 661 AKNLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLKKN 488
            K+LIKEV +  + GKK +M   F PS +ISGG WY+EG +D EF+  +K  C   + K 
Sbjct: 63  NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122

Query: 487 KVATLEAIHKFMEGKVSTE-PVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEETC 311
           KVATLE I   ++   + +  + ++++ +++  +VL N+++EVKS G GEF+ I V + C
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182

Query: 310 YKLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLD 152
           YK  N + G     P TG+ AS+PCG+CP+ + CTPDGVISP TCVYYTKWLD
Sbjct: 183 YK--NVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLD 233


>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 239

 Score =  188 bits (477), Expect = 3e-45
 Identities = 95/219 (43%), Positives = 145/219 (66%), Gaps = 3/219 (1%)
 Frame = -1

Query: 799 ALSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSVTKAIKSLKAKNLIKEVKS--HG 626
           +L+  E+++ N+I SK+  GI   + K +   +P   V K++K L++KNLIKEV +  + 
Sbjct: 23  SLTDGERVLYNLIHSKKDMGIWTGDMKRETN-LPDSIVKKSLKLLQSKNLIKEVVNIQNK 81

Query: 625 GKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLKKNKVATLEAIHKFM-E 449
           G+K  M A F PS +I+GG+WYN+G++D +F++ +K  C  Y+ + KVAT + + ++  +
Sbjct: 82  GRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKYIFRQKVATRDGVMEWSRK 141

Query: 448 GKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEETCYKLPNAAGGRDART 269
             V    V  +++ ++L  +VL +E+VEVKSTGFG+FS + V   CY+  +  G R  + 
Sbjct: 142 SGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPVGRICYRCKSKGGNRGEQK 201

Query: 268 PITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLD 152
           P  GA ASIPCG+CPR + CTPDG+ISP TCVYY KWLD
Sbjct: 202 P--GAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLD 238


>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
          Length = 235

 Score =  185 bits (470), Expect = 2e-44
 Identities = 103/231 (44%), Positives = 146/231 (63%), Gaps = 5/231 (2%)
 Frame = -1

Query: 829 KRKRPGPDPAA--LSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSVTKAIKSLKAK 656
           KRK+P  + +A  L+  EQ + N I SK+  GI  ++ K +   +P   V K++K L+AK
Sbjct: 8   KRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETN-LPDTVVNKSLKVLQAK 66

Query: 655 NLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLKKNKV 482
           NLIKEV +  + G+K  M   F PS +I+GG WY EG +D  F+  LK  C   ++K KV
Sbjct: 67  NLIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKV 126

Query: 481 ATLEAIHKFMEGK-VSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEETCYK 305
           AT+EA+  F+    VST  + ++++ ++L+ +VL N+V EVKS G GEF+ I V + CYK
Sbjct: 127 ATVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYK 186

Query: 304 LPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLD 152
              + G   +  P  GA ASIPCG+CPR   CTP+G+ISP TCVYY KWL+
Sbjct: 187 ---SIGKGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWLE 234


>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  185 bits (469), Expect = 2e-44
 Identities = 106/241 (43%), Positives = 147/241 (60%), Gaps = 6/241 (2%)
 Frame = -1

Query: 856 MSRQVAAPGKRKRPGPDPAA--LSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSVT 683
           MSR      KRKRP  + A+  L   E+++ ++I SKE  GI  ++ K +   +P   VT
Sbjct: 1   MSRSQGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETN-LPDNVVT 59

Query: 682 KAIKSLKAKNLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKAC 509
           K++K+L+ K LIKEV +    G+K  M   F PS +++GG WY EG +D E++  LK+ C
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119

Query: 508 SGYLKKNKVATLEAIHKFME--GKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEFS 335
              L K KVAT E I + +   G  +TE   Q+ +A++L  +VL NE++EV+S+G GEFS
Sbjct: 120 VKVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRALVLDNEIMEVRSSGSGEFS 178

Query: 334 RIRVEETCYKLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWL 155
            I +   CY+  N  GG     P  GA ASIPCG+CPR   CTPDG+ISP +C YY KWL
Sbjct: 179 SIPIGAVCYRCTNK-GGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWL 237

Query: 154 D 152
           D
Sbjct: 238 D 238


>ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           [Solanum tuberosum]
          Length = 237

 Score =  184 bits (467), Expect = 4e-44
 Identities = 98/235 (41%), Positives = 138/235 (58%), Gaps = 2/235 (0%)
 Frame = -1

Query: 841 AAPGKRKRPGPDPAALSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSVTKAIKSLK 662
           AA  KRKR       L   E +VLNV+ SK+  G+   + K +    P   V K + SL 
Sbjct: 7   AAAMKRKRLDSSTQGLVDAEFVVLNVVKSKKNLGVWVADVKKEANIAPA-LVDKCLTSLV 65

Query: 661 AKNLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLKKN 488
            KNLIK+V +  +  KK  M   + PS +++GG WY+EGK+D EF+  L++ C   +   
Sbjct: 66  KKNLIKKVPTIQNKAKKHYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCLKVIGMM 125

Query: 487 KVATLEAIHKFMEGKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEETCY 308
           KVAT+E IH F++ +   E    +++ ++L  MVL + ++EVKSTG GE+  I +   CY
Sbjct: 126 KVATVEGIHDFLKKRKVVECCTSQQVGEILNSMVLDDAIIEVKSTGLGEYHSIPIGSACY 185

Query: 307 KLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLDTSF 143
           ++   A G  +     G  ASIPCG CPR  +CTPDG+ISP TCVYYTKWL+  F
Sbjct: 186 RI---AVGDTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYYTKWLNIEF 237


>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
           gi|550346475|gb|EEE82426.2| hypothetical protein
           POPTR_0001s04090g [Populus trichocarpa]
          Length = 291

 Score =  183 bits (464), Expect = 9e-44
 Identities = 104/245 (42%), Positives = 149/245 (60%), Gaps = 9/245 (3%)
 Frame = -1

Query: 859 GMSRQVAAPGKRKRPGPD----PAALSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMP 692
           GMSR V  P   KR  P+      +L+  E+I+ +VI SK+  GI  ++ K + K +P  
Sbjct: 52  GMSR-VQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEAK-LPDN 109

Query: 691 SVTKAIKSLKAKNLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALK 518
            V K++K+L+ KNLIKEV +  + G+K  M   F PS +ISGG WY EG +D EF+++L+
Sbjct: 110 VVNKSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLR 169

Query: 517 KACSGYLKKNKVATLEAIHKFMEGKVSTE-PVPQEELAKLLEMMVLSNEVVEVKSTGFGE 341
           + C   ++K  VATLE +   +    +    V ++++ ++L  ++L N ++EVKS G GE
Sbjct: 170 QLCKRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNGMGE 229

Query: 340 FSRIRVEETCYKL--PNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYY 167
           F+ I   + CY+     A GG     P  GA ASIPCG+CPR   CTPDG+ISP TCVYY
Sbjct: 230 FASIPFGKVCYRYISKGALGGE----PKAGALASIPCGVCPRISHCTPDGIISPKTCVYY 285

Query: 166 TKWLD 152
            KWLD
Sbjct: 286 QKWLD 290


>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
          Length = 238

 Score =  181 bits (460), Expect = 3e-43
 Identities = 104/242 (42%), Positives = 144/242 (59%), Gaps = 7/242 (2%)
 Frame = -1

Query: 856 MSRQVAAPGKRKRPGPDPAA----LSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPS 689
           MSR +  P   KR  PD  +    L+  E+I+ NVI SK+  GI  ++ K ++  +P   
Sbjct: 1   MSR-LQEPSSLKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMK-RVAKVPDNV 58

Query: 688 VTKAIKSLKAKNLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKK 515
             KA+KSL+ K LIKEV +    GKK  + A F P+ +I+GG WY+ GKMD+  ++ LK 
Sbjct: 59  ANKALKSLETKKLIKEVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKD 118

Query: 514 ACSGYLKKNKVATLEAI-HKFMEGKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEF 338
            C  ++ K +VATLE I     +  +S   +   ++ +L+  +VL NEVVEVKS G GEF
Sbjct: 119 QCLKWIYKQRVATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEF 178

Query: 337 SRIRVEETCYKLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKW 158
             I V + CYK  +     D   P  GA +SIPCG+CPR   CTPDG+ISP TC YY++W
Sbjct: 179 DSIPVGKVCYKSTSKGSRGD---PKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQW 235

Query: 157 LD 152
           LD
Sbjct: 236 LD 237


>ref|XP_006394632.1| hypothetical protein EUTSA_v10005351mg [Eutrema salsugineum]
           gi|557091271|gb|ESQ31918.1| hypothetical protein
           EUTSA_v10005351mg [Eutrema salsugineum]
          Length = 234

 Score =  181 bits (459), Expect = 4e-43
 Identities = 101/236 (42%), Positives = 149/236 (63%), Gaps = 10/236 (4%)
 Frame = -1

Query: 829 KRKRPGPDPAA----LSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPS-VTKAIKSL 665
           KRKRP P  ++    ++ DE+ +L +I SKEG G T  E K  + T   P+ +T+AI SL
Sbjct: 3   KRKRPEPKSSSSMGGINEDEKKLLTLIRSKEGMGATTFEMK--VGTSIQPTLITRAIASL 60

Query: 664 KAKNLIKEVKSHGGKKI--IMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLK- 494
           K  +LIKEV +   K I   +G  F P  +++GG WY +G +D + ++ LK+ C   L+ 
Sbjct: 61  KRNHLIKEVPNMNNKGIKHFLGVEFEPCKELTGGDWYIDGALDVDKIEGLKEICVKILER 120

Query: 493 -KNKVATLEAIHKFMEGKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEE 317
            KN+V TL+ I  + E  +  + + +E+  ++L+ +VL N ++EVKS+G  EFS  R+ E
Sbjct: 121 HKNRVVTLDVICSYFEKVMDKDKLTKEQTKEILKNLVLDNVIMEVKSSGLSEFSSTRIGE 180

Query: 316 TCYKLPNA-AGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLD 152
            CYKL    +GG +AR    GAFAS+PCG+CP   +C+P GVISP+TCVY+ KWLD
Sbjct: 181 VCYKLTGKKSGGGEARA---GAFASVPCGVCPHVALCSPGGVISPTTCVYFQKWLD 233


>ref|XP_004148278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Cucumis sativus] gi|449506569|ref|XP_004162785.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           RPC6-like [Cucumis sativus]
          Length = 243

 Score =  181 bits (459), Expect = 4e-43
 Identities = 95/234 (40%), Positives = 145/234 (61%), Gaps = 8/234 (3%)
 Frame = -1

Query: 829 KRKRP-----GPDPAALSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSVTKAIKSL 665
           KRKRP          AL   E+++ ++I SK+  GI   + K + K      VTK++KSL
Sbjct: 11  KRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETK-FAESVVTKSLKSL 69

Query: 664 KAKNLIKEVKSHG--GKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLKK 491
           + K LIK V+ +   GKK  +   F P+ +++GG WY +G++D ++++ LK+ C+  +++
Sbjct: 70  QTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR 129

Query: 490 NKVATLEAI-HKFMEGKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEET 314
            K+ T+E I   F +       + +E++ +++  +VL N+V+EVKS+GFGEF  I + + 
Sbjct: 130 KKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKI 189

Query: 313 CYKLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLD 152
           CYK     GG     P TGA ASIPCG+CPR   CTP+G+ISP+TCVYYTKWLD
Sbjct: 190 CYKYCTQGGGLKGE-PKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLD 242


>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
           gi|222866141|gb|EEF03272.1| hypothetical protein
           POPTR_0018s04220g [Populus trichocarpa]
          Length = 239

 Score =  181 bits (458), Expect = 5e-43
 Identities = 99/231 (42%), Positives = 143/231 (61%), Gaps = 5/231 (2%)
 Frame = -1

Query: 829 KRKRPGPDPAA--LSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSVTKAIKSLKAK 656
           KRKRP  +  A  L+  E+++ +VI SK+  GI  ++ K + K +P   V K++K+L+ K
Sbjct: 11  KRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAK-LPDNVVNKSLKALQVK 69

Query: 655 NLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLKKNKV 482
            LIKEV +  + G+K  M   F PS +ISGG WY EG +D EF+++LK+ C   +++  V
Sbjct: 70  KLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLCKRQIERRGV 129

Query: 481 ATLEAIHKFMEGKVSTE-PVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEETCYK 305
           ATLE +   +    +    V ++++ ++L  ++L N ++EVKS G GEF+ I   E CYK
Sbjct: 130 ATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFASIPFGEVCYK 189

Query: 304 LPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLD 152
             +  G      P  GA ASIPCG+CPR   CTPDG+ISP TCVYY KWLD
Sbjct: 190 YISKVGL--GGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLD 238


>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
           communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
           polymerase III subunit F, putative [Ricinus communis]
          Length = 236

 Score =  180 bits (457), Expect = 6e-43
 Identities = 105/232 (45%), Positives = 147/232 (63%), Gaps = 6/232 (2%)
 Frame = -1

Query: 829 KRKRP-GPDPA-ALSSDEQIVLNVIMSKEGSGITDKEAKWQIKTIPMPSVTKAIKSLKAK 656
           KRK+P    PA +L+  E  + NVI SK+  GI  ++ K +   +P   V K++K L+AK
Sbjct: 8   KRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETN-LPDNVVNKSLKVLQAK 66

Query: 655 NLIKEVKS--HGGKKIIMGASFTPSVQISGGIWYNEGKMDYEFVDALKKACSGYLKKNKV 482
           NLIKEV +  + G+K  M   F PS +I+GG WY EG +D EF+  LK+ C+  + K KV
Sbjct: 67  NLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLKV 126

Query: 481 ATLEAIHKFME--GKVSTEPVPQEELAKLLEMMVLSNEVVEVKSTGFGEFSRIRVEETCY 308
           ATLE I   ++  G  +TE + ++++ ++++ +VL N ++EVKS G  EFS I + + CY
Sbjct: 127 ATLEGITDSIKRSGIFNTE-LTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKVCY 185

Query: 307 KLPNAAGGRDARTPITGAFASIPCGMCPRRDMCTPDGVISPSTCVYYTKWLD 152
           K      G  A  P  GA ASIPCG+CPR   CTPDG+ISP TCVYY+KWLD
Sbjct: 186 KC--VGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLD 235