BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00029995
         (318 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM55238.1| integrase [Beta vulgaris]                               62   8e-08
gb|ABH08430.1| putative integrase [Beta vulgaris]                      62   8e-08
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                       57   3e-06
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                       56   4e-06
gb|AAO73523.1| gag-pol polyprotein [Glycine max]                       56   4e-06
gb|AAO73527.1| gag-pol polyprotein [Glycine max]                       56   4e-06
ref|XP_007037251.1| Integrase, catalytic region, Zinc finger, CC...    56   6e-06
gb|AAC64917.1| gag-pol polyprotein [Glycine max]                       55   8e-06
gb|AAO73525.1| gag-pol polyprotein [Glycine max]                       55   8e-06

>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 37/93 (39%), Positives = 48/93 (51%)
 Frame = +2

Query: 14  NT*YVDRACSKHMTGNKDFLKILLKVPTTM*LLETGYRLNSLDPVH*ILLVCLHLKVFDG 193
           NT Y+D  CSKHMTG+K     L              + N          +    KV +G
Sbjct: 569 NTWYLDSGCSKHMTGDKTKFLSLTTYEGGSVTFGDNKKGN----------IVAMGKVVEG 618

Query: 194 LKVNLISISQLCDKGLNVKFDKDRCVILKYRVK 292
           LK NL+SISQ CDKG  VKFDK++C+I+  + K
Sbjct: 619 LKHNLLSISQFCDKGNTVKFDKEKCLIINIKTK 651


>gb|ABH08430.1| putative integrase [Beta vulgaris]
          Length = 1516

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 37/93 (39%), Positives = 48/93 (51%)
 Frame = +2

Query: 14  NT*YVDRACSKHMTGNKDFLKILLKVPTTM*LLETGYRLNSLDPVH*ILLVCLHLKVFDG 193
           NT Y+D  CSKHMTG+K     L              + N          +    KV +G
Sbjct: 569 NTWYLDSGCSKHMTGDKTKFLSLTTYEGGSVTFGDNKKGN----------IVAMGKVVEG 618

Query: 194 LKVNLISISQLCDKGLNVKFDKDRCVILKYRVK 292
           LK NL+SISQ CDKG  VKFDK++C+I+  + K
Sbjct: 619 LKHNLLSISQFCDKGNTVKFDKEKCLIINIKTK 651


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
 Frame = +2

Query: 23  YVDRACSKHMTGNKDFLKILLKVPTTM*LLETGYR-----LNSLDPVH*ILLVCLHLKVF 187
           Y+D  CS+HMTG K+FL  +    T+      G +     +  L  VH  L     + + 
Sbjct: 564 YLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKL--VHEGLPSLNKVLLV 621

Query: 188 DGLKVNLISISQLCDKGLNVKFDKDRCVI 274
            GL VNLISISQLCD+G NV F K  C++
Sbjct: 622 KGLTVNLISISQLCDEGFNVNFTKSECLV 650


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
 Frame = +2

Query: 23  YVDRACSKHMTGNKDFLKILLKVPTTM*LLETGYRLNSLDP---VH*ILLVCLHLKVFDG 193
           Y+D  CS+HMTG K+FL  +    T+      G +   +     VH  L     + +  G
Sbjct: 561 YLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKG 620

Query: 194 LKVNLISISQLCDKGLNVKFDKDRCVI 274
           L  NLISISQLCD+G NV F K  C++
Sbjct: 621 LTANLISISQLCDEGFNVNFTKSECLV 647


>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
 Frame = +2

Query: 23  YVDRACSKHMTGNKDFLKILLKVPTTM*LLETGYRLNSLDP---VH*ILLVCLHLKVFDG 193
           Y+D  CS+HMTG K+FL  +    T+      G +   +     VH  L     + +  G
Sbjct: 563 YLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKG 622

Query: 194 LKVNLISISQLCDKGLNVKFDKDRCVI 274
           L  NLISISQLCD+G NV F K  C++
Sbjct: 623 LTANLISISQLCDEGFNVNFTKSECLV 649


>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
 Frame = +2

Query: 23  YVDRACSKHMTGNKDFLKILLKVPTTM*LLETGYRLNSLDP---VH*ILLVCLHLKVFDG 193
           Y+D  CS+HMTG K+FL  +    T+      G +   +     VH  L     + +  G
Sbjct: 563 YLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKG 622

Query: 194 LKVNLISISQLCDKGLNVKFDKDRCVI 274
           L  NLISISQLCD+G NV F K  C++
Sbjct: 623 LTANLISISQLCDEGFNVNFTKSECLV 649


>ref|XP_007037251.1| Integrase, catalytic region, Zinc finger, CCHC-type, Peptidase
           aspartic, catalytic, putative [Theobroma cacao]
           gi|508774496|gb|EOY21752.1| Integrase, catalytic region,
           Zinc finger, CCHC-type, Peptidase aspartic, catalytic,
           putative [Theobroma cacao]
          Length = 1037

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
 Frame = +2

Query: 23  YVDRACSKHMTGNKDFLKILLKVPTTM*LLETGYRLNSLDPVH*ILLV-------CLHLK 181
           Y+D  CS+HMTG++     L K           +R NS   +H I  V         H+ 
Sbjct: 105 YLDSGCSRHMTGHEMLFAQLDKRKGGT----VSFRDNSKGRIHGISTVGKNFHTQISHVS 160

Query: 182 VFDGLKVNLISISQLCDKGLNVKFDKDRCVIL 277
           +  GLK NL+SISQLCDKG  V FD  +C ++
Sbjct: 161 LVKGLKHNLLSISQLCDKGFKVCFDSTKCEVI 192


>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
          Length = 1550

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
 Frame = +2

Query: 23  YVDRACSKHMTGNKDFLKILLKVPTTM*LLETGYR----------LNSLDPVH*ILLVCL 172
           Y+D  CS+HMTG K+FL  +    T+      G +           + L  ++ +LLV  
Sbjct: 537 YLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHDGLPSLNKVLLV-- 594

Query: 173 HLKVFDGLKVNLISISQLCDKGLNVKFDKDRCVI 274
                 GL  NLISISQLCD+G NV F K  C++
Sbjct: 595 -----KGLTANLISISQLCDEGFNVNFTKSECLV 623


>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
 Frame = +2

Query: 23  YVDRACSKHMTGNKDFLKILLKVPTTM*LLETGYR----------LNSLDPVH*ILLVCL 172
           Y+D  CS+HMTG K+FL  +    T+      G +           + L  ++ +LLV  
Sbjct: 563 YLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHDGLPSLNKVLLV-- 620

Query: 173 HLKVFDGLKVNLISISQLCDKGLNVKFDKDRCVI 274
                 GL  NLISISQLCD+G NV F K  C++
Sbjct: 621 -----KGLTANLISISQLCDEGFNVNFTKSECLV 649