BLASTX nr result

ID: Mentha29_contig00029771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00029771
         (297 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ELR55547.1| Neurofilament heavy polypeptide, partial [Bos mutus]    60   2e-07
ref|WP_002108302.1| hypothetical protein, partial [Bacillus cere...    59   9e-07

>gb|ELR55547.1| Neurofilament heavy polypeptide, partial [Bos mutus]
          Length = 249

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
 Frame = -1

Query: 297 LLLGSPAVLGAPGLIAAPGLIGSRTIVSS-GIVGASPLIASPGLIGARTVLS-PGLVGAS 124
           +L+ +P ++ APGLI  PGLI +  ++S+ G++ A  LI  PGLI A  ++S PGL+ A 
Sbjct: 10  VLISAPGLISAPGLIPPPGLISAPVLISAPGLISAPGLIPPPGLISAPVLISAPGLISAP 69

Query: 123 PLISSHGLVGSPLVSS 76
            LI   GL+ +P++ S
Sbjct: 70  GLIPPPGLISAPVLIS 85



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
 Frame = -1

Query: 297 LLLGSPAVLGAPGLIAAPGLIGSRTIVSS-GIVGASPLIASPGLIGARTVLS-PGLVGAS 124
           +L+ +P ++ APGLI  PGLI +  ++S+ G++ A  LI  PGLI A  ++S PGL+ A 
Sbjct: 34  VLISAPGLISAPGLIPPPGLISAPVLISAPGLISAPGLIPPPGLISAPVLISAPGLISAP 93

Query: 123 PLISSHGLVGSPLV 82
            LI   GL+ +P++
Sbjct: 94  GLIPPPGLISAPVL 107



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 8/78 (10%)
 Frame = -1

Query: 297 LLLGSPAVLGAPGLIAAPGLIGSRTIVSS-GIVGASPLIASPGLIGARTVL-------SP 142
           +L+ +P ++ APGLI  PGLI +  ++S+ G++ A  LI  PGLI A  ++       +P
Sbjct: 58  VLISAPGLISAPGLIPPPGLISAPVLISAPGLISAPGLIPPPGLISAPVLIFVPGLISAP 117

Query: 141 GLVGASPLISSHGLVGSP 88
           GL+    LIS+ GL+ +P
Sbjct: 118 GLIPVPVLISAPGLISAP 135


>ref|WP_002108302.1| hypothetical protein, partial [Bacillus cereus]
           gi|401143460|gb|EJQ50995.1| hypothetical protein
           IEI_02679, partial [Bacillus cereus BAG5X2-1]
          Length = 248

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = -1

Query: 294 LLGSPAVLGAPGLIAAPGLIGSRTIVSS-GIVGASPLIASPGLIGARTVL-SPGLVGASP 121
           L GSP V GA GL  +PG+ G+  +  S G++GA+ L  SPG+ G   +  SPG+ GA+ 
Sbjct: 19  LTGSPGVTGATGLTGSPGVTGATGLTGSPGVIGATGLTGSPGVTGPTGLTGSPGVTGATG 78

Query: 120 LISSHGLVGSP 88
           L  S G+ GSP
Sbjct: 79  LTGSPGVTGSP 89



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
 Frame = -1

Query: 294 LLGSPAVLGAPGLIAAPGLIGSRTIVSS-GIVGASPLIASPGLIGARTVL-------SPG 139
           L GSP V GA GL  +PG+IG+  +  S G+ G + L  SPG+ GA  +        SPG
Sbjct: 31  LTGSPGVTGATGLTGSPGVIGATGLTGSPGVTGPTGLTGSPGVTGATGLTGSPGVTGSPG 90

Query: 138 LVGASPLISSHGLVGSPLVS 79
           L G+  +  + GL GSP V+
Sbjct: 91  LTGSPGVTGATGLTGSPGVT 110


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