BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00029131
         (1223 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352116.1| PREDICTED: DNA-directed RNA polymerase V sub...   176   1e-41
ref|XP_004247645.1| PREDICTED: DNA-directed RNA polymerase II su...   170   1e-39
ref|XP_007034969.1| DNA-directed RNA polymerase II subunit RPB7,...   166   2e-38
ref|XP_007034972.1| RNA polymerase Rpb7-like, N-terminal domain,...   163   2e-37
ref|XP_002314653.1| hypothetical protein POPTR_0010s08780g [Popu...   160   1e-36
ref|XP_007223531.1| hypothetical protein PRUPE_ppa012042mg [Prun...   157   9e-36
emb|CBI26363.3| unnamed protein product [Vitis vinifera]              144   8e-32
gb|EXB38410.1| DNA-directed RNA polymerase II subunit [Morus not...   144   1e-31
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su...   143   1e-31
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep...   141   5e-31
ref|XP_004288440.1| PREDICTED: DNA-directed RNA polymerase II su...   140   1e-30
ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su...   137   1e-29
ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II su...   134   6e-29
ref|XP_006284628.1| hypothetical protein CARUB_v10005859mg [Caps...   134   1e-28
ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-contai...   133   2e-28
ref|XP_007225942.1| hypothetical protein PRUPE_ppa012282mg [Prun...   132   3e-28
ref|XP_002868270.1| RNA polymerase Rpb7 N-terminal domain-contai...   131   7e-28
ref|XP_006282711.1| hypothetical protein CARUB_v10005692mg, part...   130   9e-28
ref|XP_004235838.1| PREDICTED: DNA-directed RNA polymerase II su...   130   9e-28
gb|EYU33001.1| hypothetical protein MIMGU_mgv1a016752mg [Mimulus...   130   1e-27

>ref|XP_006352116.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Solanum
           tuberosum]
          Length = 186

 Score =  176 bits (447), Expect = 1e-41
 Identities = 93/176 (52%), Positives = 121/176 (68%), Gaps = 1/176 (0%)
 Frame = +3

Query: 249 VVISVHRMDKNKEVLASFVIERFLKQLSSIKACE-YGYLLSVTKLISIGHGDNKSSSEHI 425
           VV+ +  + K+ E+  S VI R   QL+ ++A E  GY L VTK+ S+G G    SS++I
Sbjct: 11  VVVPMEDIKKSGELPGSIVIRRLFSQLTFLRATEDCGYFLKVTKVKSVGSGKLLDSSKYI 70

Query: 426 LFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPNYFYVLGENPI 605
           +FPV F  RTF P  GEVL GIV +V  HGVFLK GPMN +YLS +KMPNY YV GENP 
Sbjct: 71  MFPVTFHSRTFLPKTGEVLVGIVIEVCRHGVFLKCGPMNSIYLSVRKMPNYNYVSGENPF 130

Query: 606 FVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVALNGLDGVDL 773
           F+ +D S+IE  V V ++V A+RW +   R+F VLA+ID D LGPV+LNG DG++L
Sbjct: 131 FICNDQSRIENEVAVRFVVYAMRWSRTLVRKFDVLASIDGDSLGPVSLNGFDGLEL 186


>ref|XP_004247645.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Solanum lycopersicum]
          Length = 186

 Score =  170 bits (431), Expect = 1e-39
 Identities = 89/176 (50%), Positives = 121/176 (68%), Gaps = 1/176 (0%)
 Frame = +3

Query: 249 VVISVHRMDKNKEVLASFVIERFLKQLSSIKACE-YGYLLSVTKLISIGHGDNKSSSEHI 425
           VV+ +  + K+ E+  + +I R   QL+ ++A E  GY L VTK+ S+G+G    SS++I
Sbjct: 11  VVVPMEDIKKSGELPGNIIIRRLFSQLTFLRATEDCGYFLKVTKVKSVGNGKLLDSSKYI 70

Query: 426 LFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPNYFYVLGENPI 605
           +FPV F   TF P  GEVL GIV +V  HGVFLK GPMN +YLS +KMPNY YV GENP 
Sbjct: 71  MFPVTFHSLTFLPKIGEVLVGIVVEVCRHGVFLKCGPMNSIYLSVRKMPNYNYVPGENPF 130

Query: 606 FVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVALNGLDGVDL 773
           F+ +D S+IE  V V ++V A+RW +   R+F VLA+I+ D LGPV+LNG DG++L
Sbjct: 131 FICNDQSRIENEVAVRFVVYAMRWSRTLVRKFDVLASIEGDCLGPVSLNGFDGLEL 186


>ref|XP_007034969.1| DNA-directed RNA polymerase II subunit RPB7, putative isoform 1
           [Theobroma cacao] gi|590658861|ref|XP_007034970.1|
           DNA-directed RNA polymerase II subunit RPB7, putative
           isoform 1 [Theobroma cacao]
           gi|590658864|ref|XP_007034971.1| DNA-directed RNA
           polymerase II subunit RPB7, putative isoform 1
           [Theobroma cacao] gi|508713998|gb|EOY05895.1|
           DNA-directed RNA polymerase II subunit RPB7, putative
           isoform 1 [Theobroma cacao] gi|508713999|gb|EOY05896.1|
           DNA-directed RNA polymerase II subunit RPB7, putative
           isoform 1 [Theobroma cacao] gi|508714000|gb|EOY05897.1|
           DNA-directed RNA polymerase II subunit RPB7, putative
           isoform 1 [Theobroma cacao]
          Length = 190

 Score =  166 bits (419), Expect = 2e-38
 Identities = 92/189 (48%), Positives = 119/189 (62%), Gaps = 1/189 (0%)
 Frame = +3

Query: 210 IIDMLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKACE-YGYLLSVTKLIS 386
           I DM  EV L   V +    +DK   V    ++   L+ L   +A E +GY LSVT L S
Sbjct: 3   IQDMFSEVELQRDVKVHAGNLDKRGLVSQRSILVLLLEDLFKERASEDHGYFLSVTSLKS 62

Query: 387 IGHGDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQK 566
           IG GD    S +++F V F CRTF P  GEVL G+VH + H GVFL+ GP+ + YLSA K
Sbjct: 63  IGKGDVVDESGNMVFTVVFTCRTFKPFKGEVLQGVVHHICHRGVFLRCGPVRIAYLSAWK 122

Query: 567 MPNYFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVA 746
           MPNY YV G  P+F+ DDLSKIE  VVV ++VLAVRW     R+F +LA++++D LGP++
Sbjct: 123 MPNYHYVPGAKPVFISDDLSKIEKDVVVCFLVLAVRWISAS-RDFELLASLNADSLGPIS 181

Query: 747 LNGLDGVDL 773
           L   D VDL
Sbjct: 182 LPWSDEVDL 190


>ref|XP_007034972.1| RNA polymerase Rpb7-like, N-terminal domain, putative isoform 4
           [Theobroma cacao] gi|590658871|ref|XP_007034973.1| RNA
           polymerase Rpb7-like, N-terminal domain, putative
           isoform 4 [Theobroma cacao] gi|508714001|gb|EOY05898.1|
           RNA polymerase Rpb7-like, N-terminal domain, putative
           isoform 4 [Theobroma cacao] gi|508714002|gb|EOY05899.1|
           RNA polymerase Rpb7-like, N-terminal domain, putative
           isoform 4 [Theobroma cacao]
          Length = 185

 Score =  163 bits (412), Expect = 2e-37
 Identities = 90/186 (48%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKACE-YGYLLSVTKLISIGH 395
           M  EV L   V +    +DK   V    ++   L+ L   +A E +GY LSVT L SIG 
Sbjct: 1   MFSEVELQRDVKVHAGNLDKRGLVSQRSILVLLLEDLFKERASEDHGYFLSVTSLKSIGK 60

Query: 396 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 575
           GD    S +++F V F CRTF P  GEVL G+VH + H GVFL+ GP+ + YLSA KMPN
Sbjct: 61  GDVVDESGNMVFTVVFTCRTFKPFKGEVLQGVVHHICHRGVFLRCGPVRIAYLSAWKMPN 120

Query: 576 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVALNG 755
           Y YV G  P+F+ DDLSKIE  VVV ++VLAVRW     R+F +LA++++D LGP++L  
Sbjct: 121 YHYVPGAKPVFISDDLSKIEKDVVVCFLVLAVRWISAS-RDFELLASLNADSLGPISLPW 179

Query: 756 LDGVDL 773
            D VDL
Sbjct: 180 SDEVDL 185


>ref|XP_002314653.1| hypothetical protein POPTR_0010s08780g [Populus trichocarpa]
           gi|222863693|gb|EEF00824.1| hypothetical protein
           POPTR_0010s08780g [Populus trichocarpa]
          Length = 189

 Score =  160 bits (405), Expect = 1e-36
 Identities = 84/189 (44%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKAC-EYGYLLSVTKLISIGH 395
           M  EV +   V I    +D+N  V    ++   LK L S+KA  ++GY L+VT L SIG 
Sbjct: 1   MFGEVEVCSTVRIIAENLDRNGLVPQRSIVTHLLKDLLSMKASKDHGYFLAVTNLKSIGK 60

Query: 396 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 575
           G+  + S  +LF V+F CRTF P+ GE+L G+VH+   HGV L+ GP+  ++LSA+KMPN
Sbjct: 61  GEVVNKSGDVLFHVEFKCRTFMPMKGEILQGVVHRTFRHGVLLRCGPVKYIFLSARKMPN 120

Query: 576 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKW---REFRVLATIDSDGLGPVA 746
           Y Y   ENP+F+ D+L++IE  V+V + VL VRW +  W   R+F +LA++  D LGP++
Sbjct: 121 YQYTSEENPVFLNDELARIENNVLVRFSVLDVRWIEKMWDMRRDFMMLASLVGDSLGPIS 180

Query: 747 LNGLDGVDL 773
           L G D +DL
Sbjct: 181 LCGSDELDL 189


>ref|XP_007223531.1| hypothetical protein PRUPE_ppa012042mg [Prunus persica]
           gi|462420467|gb|EMJ24730.1| hypothetical protein
           PRUPE_ppa012042mg [Prunus persica]
          Length = 186

 Score =  157 bits (397), Expect = 9e-36
 Identities = 89/188 (47%), Positives = 120/188 (63%), Gaps = 3/188 (1%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKACE-YGYLLSVTKLISIGH 395
           M  EV L  +V +    +D++K V + F++ R L+ L S KA E  GY L+VT +  IG 
Sbjct: 1   MFYEVELLREVAVLAENLDRDKLVSSRFIVTRLLEGLLSEKADEDLGYFLAVTGIKRIGK 60

Query: 396 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 575
           G+   +S  + FPV F CR F P  GE+L G+V  V   GVFL+ GP+  V+LSA+KMPN
Sbjct: 61  GEVVHNSGDVFFPVVFNCRMFLPRKGEILEGVVDHVHRLGVFLRCGPVKYVFLSARKMPN 120

Query: 576 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRW--RQDKWREFRVLATIDSDGLGPVAL 749
           Y YV+GE P+F+ DDL++IE  VVV + V  VRW  R+D  +EF +LAT+  D LGPV  
Sbjct: 121 YRYVVGEKPVFLHDDLARIEKDVVVRFEVFGVRWMRREDITKEFMMLATLQGDLLGPV-- 178

Query: 750 NGLDGVDL 773
            G DG+DL
Sbjct: 179 TGPDGLDL 186


>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  144 bits (363), Expect = 8e-32
 Identities = 79/178 (44%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
 Frame = +3

Query: 216 DMLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKAC-EYGYLLSVTKLISIG 392
           +M  +V L   V+I    +D    +L   +I R L   S+ KA  E GY L+VT L +IG
Sbjct: 65  EMFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIG 124

Query: 393 HGDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMP 572
            G  +  S  +LFPV F C TF    GE+L G+VHKV  HGV L+ GP+  +YLS QKMP
Sbjct: 125 EGKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMP 184

Query: 573 NYFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVA 746
           +Y YV GENP+F+ + LSKIE  VVV ++V+  +W + + REF+ L +++ D LGP++
Sbjct: 185 DYRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAE-REFQALVSLEGDYLGPLS 241


>gb|EXB38410.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 202

 Score =  144 bits (362), Expect = 1e-31
 Identities = 87/203 (42%), Positives = 116/203 (57%), Gaps = 18/203 (8%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLA--SFVIERFLKQLSSIKAC-EYGYLLSVTKLISI 389
           M  EV L   V +    +  +  V    SF++ R L+ L   KA  ++GY L+VT L  I
Sbjct: 1   MFSEVELIRDVTVDAENIKSDGLVSRPQSFIMTRLLEDLVREKASKDHGYFLAVTSLKKI 60

Query: 390 GHGDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKM 569
           G       S  + FPV F CRTF P  GE+L GIVH +  HGVFL+ GP+   YLSA+KM
Sbjct: 61  GKMKAVEESGDVFFPVVFNCRTFLPYEGEILQGIVHCIYRHGVFLRCGPIKYAYLSARKM 120

Query: 570 PNYFYVLGE-----------NPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKW----REFR 704
           P Y YV G+            P+FV ++ +KIE GVVV +MVL VRW ++ W     EF 
Sbjct: 121 PGYQYVYGQKMACQKCGHDRKPLFVSNEFAKIENGVVVCFMVLGVRWFEN-WGNVKNEFG 179

Query: 705 VLATIDSDGLGPVALNGLDGVDL 773
           VLAT++ D LGP++L+G   +DL
Sbjct: 180 VLATLEGDSLGPISLSGSGELDL 202


>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147822056|emb|CAN61549.1| hypothetical
           protein VITISV_043525 [Vitis vinifera]
          Length = 177

 Score =  143 bits (361), Expect = 1e-31
 Identities = 79/177 (44%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKAC-EYGYLLSVTKLISIGH 395
           M  +V L   V+I    +D    +L   +I R L   S+ KA  E GY L+VT L +IG 
Sbjct: 1   MFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGE 60

Query: 396 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 575
           G  +  S  +LFPV F C TF    GE+L G+VHKV  HGV L+ GP+  +YLS QKMP+
Sbjct: 61  GKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPD 120

Query: 576 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVA 746
           Y YV GENP+F+ + LSKIE  VVV ++V+  +W + + REF+ L +++ D LGP++
Sbjct: 121 YRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAE-REFQALVSLEGDYLGPLS 176


>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223538083|gb|EEF39694.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score =  141 bits (356), Expect = 5e-31
 Identities = 78/177 (44%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKAC-EYGYLLSVTKLISIGH 395
           M  +V L   V+IS   +D    +L   +I R L+  +S KA  + GY L+VT L SIG 
Sbjct: 1   MYLKVQLPWNVIISAEHLDAKGLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGE 60

Query: 396 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 575
           G  +  +  +LFPV F   TF    GE+L G+VHKV  HGVF++ GP+  +YLS  KMP+
Sbjct: 61  GKVREHTGDVLFPVVFNGITFKIFRGEILEGVVHKVLKHGVFIRCGPIENIYLSCMKMPD 120

Query: 576 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVA 746
           Y YV GENP+F+ D  SKIE  VVV ++V+  +W + + REF+ L +++ D LGPV+
Sbjct: 121 YHYVPGENPVFLNDKTSKIEKDVVVRFIVIGTKWLEAE-REFQALVSLEGDYLGPVS 176


>ref|XP_004288440.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb7-like
           [Fragaria vesca subsp. vesca]
          Length = 188

 Score =  140 bits (353), Expect = 1e-30
 Identities = 81/180 (45%), Positives = 108/180 (60%), Gaps = 5/180 (2%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLASFVIE-RFLKQLSSIKAC-EYGYLLSVTKLISIG 392
           M  EV L   VV+   ++DK+    +  VI  + LK L   KA  ++GY L VT L  +G
Sbjct: 1   MYSEVELVRGVVVLAEKLDKDSPFSSKSVITTQLLKDLLKEKASKDHGYFLKVTALKKVG 60

Query: 393 HGDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMP 572
            G     S  +LF V F CRTF P+ GE+L G+V+KV + GVF++ GP+N  YLSA+KMP
Sbjct: 61  TGQILDHSRKMLFHVAFSCRTFIPLQGEILEGVVYKVHNLGVFIRCGPLNYAYLSARKMP 120

Query: 573 NYFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRW---RQDKWREFRVLATIDSDGLGPV 743
           NY YV G  P F++ DL+KIE  VVV + VL  RW    ++   EF VL ++  D LGPV
Sbjct: 121 NYHYVAGTKPFFLKGDLAKIEKKVVVRFRVLHARWTAKSREIRNEFVVLGSMVGDSLGPV 180


>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449522228|ref|XP_004168129.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 175

 Score =  137 bits (344), Expect = 1e-29
 Identities = 77/177 (43%), Positives = 111/177 (62%), Gaps = 1/177 (0%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKAC-EYGYLLSVTKLISIGH 395
           M  +V L   V+I    +D    +L   +I R L + ++ KA  + GY L+VT L +IG 
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGE 60

Query: 396 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 575
           G  + + + +LFPV F   TF    GE+L G+VHKV  HGVFL+ GP+  +YLS  KMP+
Sbjct: 61  GKVRQTGD-VLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPD 119

Query: 576 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVA 746
           Y YV GENP+F+ D LSKIE  VVV ++V+  +W + + REF+ L +++ D LGPV+
Sbjct: 120 YRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAE-REFQALVSLEGDYLGPVS 175


>ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449432630|ref|XP_004134102.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
           gi|449504102|ref|XP_004162253.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like [Cucumis sativus]
           gi|449504105|ref|XP_004162254.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like [Cucumis sativus]
          Length = 190

 Score =  134 bits (338), Expect = 6e-29
 Identities = 78/190 (41%), Positives = 114/190 (60%), Gaps = 5/190 (2%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKAC-EYGYLLSVTKLISIGH 395
           M  EV L   V I+V +  ++      ++I   L+ L   KA  ++GY LSVT L SIG 
Sbjct: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLSVTSLRSIGK 60

Query: 396 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 575
           G  K+ S+ + FP+ F CRTF P  GE+L G+V  +   G+ LK GP+  V+LSA+KMP 
Sbjct: 61  GIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYVFLSARKMPT 120

Query: 576 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKW---REFRVLATID-SDGLGPV 743
           Y YV GENP+F   + + I   VVV + VL VRW + +    +EF +LA+++ ++ LGP+
Sbjct: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180

Query: 744 ALNGLDGVDL 773
           +L+  D  DL
Sbjct: 181 SLSDSDEFDL 190


>ref|XP_006284628.1| hypothetical protein CARUB_v10005859mg [Capsella rubella]
           gi|482553333|gb|EOA17526.1| hypothetical protein
           CARUB_v10005859mg [Capsella rubella]
          Length = 178

 Score =  134 bits (336), Expect = 1e-28
 Identities = 72/177 (40%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKAC-EYGYLLSVTKLISIGH 395
           M  +V L   V+I    MD    +L   ++   L   +S KA  E GY ++VT L  IG 
Sbjct: 1   MFLKVKLPWNVMIPAENMDAKGLMLKRAILVELLNAFASKKATKELGYYVAVTTLDKIGE 60

Query: 396 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 575
           G  +  +  +LFPV F   TF    GE++ G+VHKV  HGVF++ GP+  VYLS  KMP+
Sbjct: 61  GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYMKMPD 120

Query: 576 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVA 746
           Y Y+ GENPIF+ D +S+I++   V  +VL  +W + + REF+ LA+++ D LGP++
Sbjct: 121 YKYIPGENPIFMNDKMSRIQVEATVRVVVLGTKWMEAE-REFQALASLEGDYLGPIS 176


>ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-containing family protein
           [Populus trichocarpa] gi|222852388|gb|EEE89935.1| RNA
           polymerase Rpb7 N-terminal domain-containing family
           protein [Populus trichocarpa]
          Length = 176

 Score =  133 bits (334), Expect = 2e-28
 Identities = 75/177 (42%), Positives = 105/177 (59%), Gaps = 1/177 (0%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKAC-EYGYLLSVTKLISIGH 395
           M  +V L   V+I    +D    +L   ++ R L   +   A  + GY L+V+ L SIG 
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIVVRLLDDFAKKGATKDLGYYLAVSTLESIGE 60

Query: 396 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 575
           G  +  +  +LFPV F   TF    GE+L GIVHKV  HGV L+ GP+  +YLS  KMP+
Sbjct: 61  GKVRQHTGDVLFPVVFSGITFKIFRGEILDGIVHKVLKHGVLLRCGPIENIYLSCMKMPD 120

Query: 576 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVA 746
           Y YV GENP+F+ D  SKIE  VVV ++VL  +W + + REF+ L +++ D LGPV+
Sbjct: 121 YRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAE-REFQALVSLEGDYLGPVS 176


>ref|XP_007225942.1| hypothetical protein PRUPE_ppa012282mg [Prunus persica]
           gi|462422878|gb|EMJ27141.1| hypothetical protein
           PRUPE_ppa012282mg [Prunus persica]
          Length = 176

 Score =  132 bits (332), Expect = 3e-28
 Identities = 74/177 (41%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKAC-EYGYLLSVTKLISIGH 395
           M  +V L   VVI    +D    +L   ++ + L + +S KA  + GYLL++T L SIG 
Sbjct: 1   MFLKVQLPWNVVIPAESLDIKGLMLQKSIVVQLLDEFASRKATKDLGYLLALTTLESIGE 60

Query: 396 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 575
           G  +  +  +LFPV F   TF    GE+  G+VHKV  HGVFL  GP+  +YLS  KMP+
Sbjct: 61  GRVREHTGDVLFPVVFSGVTFKLFRGEIAEGVVHKVLKHGVFLSCGPVENIYLSKLKMPD 120

Query: 576 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVA 746
           Y YV GENP+F+   +SKIE G  V ++V+  +W + + REF+ L  + +D LGPV+
Sbjct: 121 YDYVPGENPVFMNSKMSKIEKGFTVRFIVIGTKWLESE-REFQALVGLHADYLGPVS 176


>ref|XP_002868270.1| RNA polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297314106|gb|EFH44529.1| RNA polymerase Rpb7
           N-terminal domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 178

 Score =  131 bits (329), Expect = 7e-28
 Identities = 71/177 (40%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
 Frame = +3

Query: 219 MLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKAC-EYGYLLSVTKLISIGH 395
           M  +V L   V+I    MD    +L   ++   L   +S KA  E GY ++VT L  IG 
Sbjct: 1   MFLKVQLPWNVMIPAENMDAKGLILKRAILVELLDAFASKKATKELGYYVAVTTLDKIGE 60

Query: 396 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 575
           G  +  +  +LFPV F   TF    GE++ G+VHKV  HGVF++ GP+  VYLS  KMP+
Sbjct: 61  GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYTKMPD 120

Query: 576 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVA 746
           Y YV GENPIF+ +  S+I++   V  +V+ ++W + + REF+ LA+++ D LGP++
Sbjct: 121 YKYVPGENPIFMNEKTSRIQVETTVRVVVIGIKWMEAE-REFQALASLEGDYLGPLS 176


>ref|XP_006282711.1| hypothetical protein CARUB_v10005692mg, partial [Capsella rubella]
           gi|482551416|gb|EOA15609.1| hypothetical protein
           CARUB_v10005692mg, partial [Capsella rubella]
          Length = 221

 Score =  130 bits (328), Expect = 9e-28
 Identities = 79/202 (39%), Positives = 118/202 (58%), Gaps = 19/202 (9%)
 Frame = +3

Query: 213 IDMLREVILTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKAC-EYGYLLSVTKLISI 389
           ++M R+V +  K +I  H   +        ++ R L+ L+  KAC ++G+ L +T + SI
Sbjct: 24  VEMSRDVAICAKHLIG-HTFHQE-------ILTRLLQVLTHEKACRKHGFYLGITSVKSI 75

Query: 390 GHGDNK-----------SSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGP 536
           G   NK             ++ + FPV F CRTF P  G+VL G+V  V  +GVF+ SGP
Sbjct: 76  GKNKNKIININNNNEDNHQAQILTFPVSFTCRTFLPARGDVLQGVVKMVLSNGVFISSGP 135

Query: 537 MNMVYLSAQKMPNYFYVLGEN----PIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWR--- 695
           +   YLS  KMP+Y YV  E+    P F +DDLSKI +GVVV ++VLAVR+++   +   
Sbjct: 136 LRYAYLSPLKMPDYHYVQSESDDEKPYFQKDDLSKIAVGVVVQFVVLAVRFKERPHKIRN 195

Query: 696 EFRVLATIDSDGLGPVALNGLD 761
           ++ VLAT++ D LGP++L G D
Sbjct: 196 DYYVLATLEGDTLGPISLAGSD 217


>ref|XP_004235838.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Solanum lycopersicum]
          Length = 180

 Score =  130 bits (328), Expect = 9e-28
 Identities = 69/175 (39%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
 Frame = +3

Query: 237 LTHKVVISVHRMDKNKEVLASFVIERFLKQLSSIKACE-YGYLLSVTKLISIGHGDNKSS 413
           L+  V+I    +D    +L   ++ R L   +S KA +  GY ++VT L  IG G  +  
Sbjct: 7   LSWNVIIPAENLDVEGLMLQKAIVIRLLDDFASKKASKSLGYFMAVTTLERIGEGKVREH 66

Query: 414 SEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPNYFYVLG 593
           +  +LFPV+F C TF    GE+L G+V K+  HGVFL+ GP + VYLS QKM +Y YV G
Sbjct: 67  TGDVLFPVEFSCITFKIFRGEILDGVVEKILKHGVFLRCGPTDKVYLSHQKMADYKYVPG 126

Query: 594 ENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWREFRVLATIDSDGLGPVALNGL 758
           ENPIF+ + +S+IE   VV ++V+  R+ + + +EF+ + +++ D LGP++ N +
Sbjct: 127 ENPIFMNEKMSRIEKDTVVRFIVVGARYVEAE-KEFQAVVSLEGDYLGPISQNAV 180


>gb|EYU33001.1| hypothetical protein MIMGU_mgv1a016752mg [Mimulus guttatus]
          Length = 108

 Score =  130 bits (327), Expect = 1e-27
 Identities = 64/99 (64%), Positives = 81/99 (81%), Gaps = 2/99 (2%)
 Frame = +3

Query: 480 LTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPNYFYVLGEN--PIFVRDDLSKIEIGVVVS 653
           + G+V++V   GVF+KSGPM+ VYLS +KMPNY YVLGEN  P +V  DLS+IEIGV+V 
Sbjct: 1   MDGVVYRVIGGGVFIKSGPMSYVYLSDRKMPNYNYVLGENRNPRYVGVDLSRIEIGVLVR 60

Query: 654 YMVLAVRWRQDKWREFRVLATIDSDGLGPVALNGLDGVD 770
           + VLA +W +DK+REFRVLA+ID DGLGPV++NG DGVD
Sbjct: 61  FRVLAAKWVEDKYREFRVLASIDGDGLGPVSMNGFDGVD 99