BLASTX nr result

ID: Mentha29_contig00027450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00027450
         (274 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42101.1| hypothetical protein MIMGU_mgv1a000307mg [Mimulus...    61   2e-07
ref|XP_004310060.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    59   7e-07

>gb|EYU42101.1| hypothetical protein MIMGU_mgv1a000307mg [Mimulus guttatus]
          Length = 1272

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +3

Query: 165 TDTLAPEESGVGGLLTSGKDKVVFRPQRKPVLGLDV 272
           TDTL P++S +GGLL  GKDKVVFRPQRK +LGLDV
Sbjct: 3   TDTLVPDDSSIGGLLVPGKDKVVFRPQRKSILGLDV 38


>ref|XP_004310060.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Fragaria vesca subsp. vesca]
          Length = 1307

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = +3

Query: 120 MEGSGNSHKFDLDKITDTLAPEESGVGGLLTSGKDKVVFR-PQRKPVLGLDV 272
           ME  GN+    LDK T TL PE+S  GGL   GKD+VV+R P+RK +LGLDV
Sbjct: 1   MENKGNTEAIKLDKTTATLEPEKSSGGGLFVPGKDRVVYRPPERKSLLGLDV 52


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