BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00023979
         (1307 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007033139.1| Retrotransposon protein, putative [Theobroma...   197   8e-48
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   182   2e-43
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   178   4e-42
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     175   4e-41
ref|XP_006587404.1| PREDICTED: uncharacterized protein LOC102662...   173   2e-40
ref|XP_006603285.1| PREDICTED: uncharacterized protein LOC102668...   172   2e-40
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   172   4e-40
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   171   8e-40
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   170   1e-39
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        169   3e-39
ref|XP_004977683.1| PREDICTED: uncharacterized protein LOC101759...   164   8e-38
emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]        164   8e-38
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   163   1e-37
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     163   1e-37
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   147   2e-37
ref|XP_007010461.1| Retrotransposon protein, putative [Theobroma...   162   2e-37
ref|XP_006436321.1| hypothetical protein CICLE_v10033628mg, part...   162   3e-37
gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-...   160   1e-36
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     158   4e-36
gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Jap...   154   1e-34

>ref|XP_007033139.1| Retrotransposon protein, putative [Theobroma cacao]
           gi|508712168|gb|EOY04065.1| Retrotransposon protein,
           putative [Theobroma cacao]
          Length = 289

 Score =  197 bits (501), Expect = 8e-48
 Identities = 114/276 (41%), Positives = 157/276 (56%), Gaps = 3/276 (1%)
 Frame = -2

Query: 970 SLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPVMPXXXXXXXXXXXXXX 791
           +L LR +LD  KL G NFLD  RNL++VL+ EK  Y+ D  IP +P              
Sbjct: 4   NLLLRSILDANKLIGPNFLDSFRNLKIVLKQEKKSYIFDTSIPPVPTTDANVEDKE---- 59

Query: 790 XETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNLEF 611
                  AHQ+H+DD   A C+M+ASM +ELQ+Q EHM    MI HL +L+    +   +
Sbjct: 60  -------AHQRHKDDDDQAACVMLASMTLELQKQDEHMDVQSMILHLRELFDKEGRTERY 112

Query: 610 DMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENFIL 431
           ++ KELF  K+ EG SV  HVLKMIG IE+L  +GL +   L +N +L SLP SF  F+L
Sbjct: 113 EISKELFRCKMAEGSSVKPHVLKMIGPIERLGQLGLAMYHELSINLVLQSLPDSFSQFVL 172

Query: 430 NYNMNKTKESLTDLHNMLKNYESTVSKGK-AVLMVSSSAA--PNSXXXXXXXXXKPASNV 260
           N++MN+ + +L  L NML   E ++ K K ++L++SSS A                + N 
Sbjct: 173 NFHMNRLEATLPKLLNMLDTAEKSIRKHKGSLLLISSSKAHTKQHKKKAQKEKKVKSQNE 232

Query: 259 VALKPKGGTHKKPDISKDQCVFCRQKGHWKRDCPKF 152
            ALKPKGG   K D  KD C  C + GHW+R+C ++
Sbjct: 233 KALKPKGGV--KKDKEKDICDHCGKLGHWRRNCKEY 266


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  182 bits (463), Expect = 2e-43
 Identities = 103/278 (37%), Positives = 157/278 (56%), Gaps = 4/278 (1%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPVMPXXXXXXXXXXXXX 794
           +S +LR +L+  KL G+NF DW RNLR+VLR +K E+VL+EPIP +P             
Sbjct: 11  SSFALRSILEKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPTENAAAAIKT--- 67

Query: 793 XXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNLE 614
                   A++K  D++    C+M+A+M  +LQ+Q E++  Y+MI  L+ ++ + ++   
Sbjct: 68  --------AYKKACDESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTER 119

Query: 613 FDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENFI 434
           F++ K LFG KL EG  VS HV+KM+G  + L  +G  L + L  + IL SLP S+  FI
Sbjct: 120 FEISKNLFGCKLAEGGPVSPHVIKMVGYTQSLEKLGFPLSQELATDLILASLPESYGQFI 179

Query: 433 LNYNMNKTKESLTDLHNMLKNYESTVSK-GKAVLMVSSSAAPNSXXXXXXXXXKPA---S 266
           LN++MN   ++LT+LH MLK  E +V K    V+MV  S +              A    
Sbjct: 180 LNFHMNGLDKNLTELHMMLKTAEGSVKKCNNHVIMVQKSTSFKKKAKTWIKKKGKAKVSD 239

Query: 265 NVVALKPKGGTHKKPDISKDQCVFCRQKGHWKRDCPKF 152
            +   KPK  T   P   +++C +C++ GHWKR+C K+
Sbjct: 240 KIQTDKPKTKTKSGP-TQENECFYCKELGHWKRNCKKY 276


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  178 bits (452), Expect = 4e-42
 Identities = 100/277 (36%), Positives = 157/277 (56%), Gaps = 3/277 (1%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPVMPXXXXXXXXXXXXX 794
           +S +LR +L   KL G+NF DW RNLR+VLR +K E+VL+EPIP +P             
Sbjct: 94  SSFALRSILKKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPADNAAATLKS--- 150

Query: 793 XXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNLE 614
                   A++K  D++    C+M+A+M  +LQ+Q E++  Y+MI  L+ ++ + ++   
Sbjct: 151 --------AYKKACDESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTKR 202

Query: 613 FDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENFI 434
           F++ K LF  KL EG  VS H++KM+G  + L  +G  L + L  + IL SLP S+  FI
Sbjct: 203 FEISKNLFSCKLAEGSPVSPHMIKMVGYTQSLEKLGFPLSQELATDLILASLPASYGQFI 262

Query: 433 LNYNMNKTKESLTDLHNMLKNYESTVSK-GKAVLMV--SSSAAPNSXXXXXXXXXKPASN 263
           LN++MN   ++LT+LH +LK  E ++ K    V+MV  S+S    +         K    
Sbjct: 263 LNFHMNGLDKNLTELHMLLKTAEDSIKKINSHVMMVQKSTSFKKKARTWVKGKGKKVLDG 322

Query: 262 VVALKPKGGTHKKPDISKDQCVFCRQKGHWKRDCPKF 152
           +   KPK  T   P   +++C +C++ GHWKR+C K+
Sbjct: 323 IQTNKPKLKTKSGP-TQENECFYCKEPGHWKRNCKKY 358


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  175 bits (443), Expect = 4e-41
 Identities = 99/276 (35%), Positives = 148/276 (53%), Gaps = 2/276 (0%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPV-MPXXXXXXXXXXXX 797
           ++ +LR +L+  KL G+NF+DW RNLR+VL+ E+ EYVL+ P P  +P            
Sbjct: 8   STFNLRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYPEELPNNATATARR--- 64

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                      +KH +DA    C+M+A+M  ELQ+Q+E    +  I+ L  ++ + +++ 
Sbjct: 65  ---------GFEKHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFENQARDE 115

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
            F+  K LF  +L EG  VS HV+KMIG IE L  +G  L + L  + IL SLP SFE F
Sbjct: 116 RFNTSKSLFACRLVEGNPVSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPF 175

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASNVV 257
           ILNY+MN    +L +LH MLK  E ++ K    +M+  +A             K   + +
Sbjct: 176 ILNYHMNNMDRTLAELHGMLKTVEESIQKNGHHVMMMQNAKRKPPVKKLCTKRKLTPDEI 235

Query: 256 ALKPKGGTHKKPDISKDQ-CVFCRQKGHWKRDCPKF 152
           A        KK   + D  C +C++ GHWKR+C K+
Sbjct: 236 ASASNAKKGKKGSAASDAVCFYCKETGHWKRNCKKY 271


>ref|XP_006587404.1| PREDICTED: uncharacterized protein LOC102662010, partial [Glycine
           max]
          Length = 277

 Score =  173 bits (438), Expect = 2e-40
 Identities = 105/283 (37%), Positives = 153/283 (54%), Gaps = 8/283 (2%)
 Frame = -2

Query: 976 MASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPVMPXXXXXXXXXXXX 797
           M+SLSLR +L+  KL  +N+ DW RNLR+VL  EK+   +D+P    P            
Sbjct: 1   MSSLSLRGILEPGKLVRANYDDWYRNLRIVLMHEKLIDTIDKPPMEAPDLSDAEATK--- 57

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                      QK+ D+  TA+CI++ASM  ELQRQH+ M PYE++ HL+K+Y   S+  
Sbjct: 58  ---------VFQKYLDECLTAKCIILASMSSELQRQHQDMDPYEIVEHLKKMYGGQSRMT 108

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
            F + K LF + L   ++V  HVLKMI +IE+L  +G  L + L  + I+ SL  SF  F
Sbjct: 109 RFQLSKALFRSSLAANENVGPHVLKMIDLIEQLEKLGCTLGKELSQDLIMQSLSDSFSQF 168

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVS--KGKAVLMVSSSAAPNSXXXXXXXXXKPASN 263
           I+N+NMNK    L ++ N+L +YE+ ++  K K  +MV  + +                 
Sbjct: 169 IVNFNMNKISCDLHEMLNLLIDYENQIASKKKKGTVMVVGNNSKKKGKVPKRKN------ 222

Query: 262 VVALKPKGGTHK------KPDISKDQCVFCRQKGHWKRDCPKF 152
              L PKGG  K      K D +  +C F ++KGHWKR+C K+
Sbjct: 223 ---LGPKGGMTKPMNKRNKIDQTDAECFFYKEKGHWKRNCKKY 262


>ref|XP_006603285.1| PREDICTED: uncharacterized protein LOC102668699 [Glycine max]
          Length = 291

 Score =  172 bits (437), Expect = 2e-40
 Identities = 101/273 (36%), Positives = 147/273 (53%), Gaps = 2/273 (0%)
 Frame = -2

Query: 976 MASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPVMPXXXXXXXXXXXX 797
           M+SLSL  +L++ KL  +N+ DW RNLR+VL  EK+   +D+P    P            
Sbjct: 34  MSSLSLHGILESGKLVRANYDDWYRNLRIVLMHEKLIDTIDKPPMEAPDLSDAEATK--- 90

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                      QK+ D+  TA+CI++A M  ELQRQH+ M PYE++ HL+K+Y   S+  
Sbjct: 91  ---------VFQKYLDECLTAKCIILALMSSELQRQHQDMDPYEIVEHLKKMYGGQSRMA 141

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
            F + K LF + L   + V  HVLKMI +IE+L  +G  L + L  + IL SL  SF  F
Sbjct: 142 RFQLSKALFRSSLTTNEKVGPHVLKMIDLIEQLEKLGCTLGKKLSQDLILQSLSDSFSQF 201

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVS--KGKAVLMVSSSAAPNSXXXXXXXXXKPASN 263
           I+N+NMNK    L ++ N+L +YE+ +S  K K  +MV   ++             P   
Sbjct: 202 IVNFNMNKMSCDLHEMLNLLIDYENQISSEKNKGTVMVVGKSSKKKDTVPKRKNLGPKGG 261

Query: 262 VVALKPKGGTHKKPDISKDQCVFCRQKGHWKRD 164
           +   K K     K D +  +C FC++KGHWKR+
Sbjct: 262 MTKTKNK---RNKIDQTDVECFFCKEKGHWKRN 291


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score =  172 bits (435), Expect = 4e-40
 Identities = 97/271 (35%), Positives = 137/271 (50%), Gaps = 1/271 (0%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPV-MPXXXXXXXXXXXX 797
           ++ +LR +L+  KLTG+NF+DW RNLR+VLR E  E+VL EP P  +P            
Sbjct: 74  SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRRE-- 131

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                     H+K  +D     C+M+A+M  ELQRQ+E +  + +I  L  ++   ++  
Sbjct: 132 ----------HEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAE 181

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
            F+  K LF  +L EG  VS HV+KMIG  E L  +G  L   L  + IL SLP SFE F
Sbjct: 182 RFNTSKSLFACRLAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPF 241

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASNVV 257
           I+N+NMN    +L +LH MLK  E ++ K    +MV     PN+                
Sbjct: 242 IMNFNMNNLNRTLAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITS 301

Query: 256 ALKPKGGTHKKPDISKDQCVFCRQKGHWKRD 164
               K    K       +C FC++ GHWKR+
Sbjct: 302 TSNSKTKVQKTGSAKDAECFFCKETGHWKRN 332


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  171 bits (432), Expect = 8e-40
 Identities = 101/276 (36%), Positives = 142/276 (51%), Gaps = 2/276 (0%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPV-MPXXXXXXXXXXXX 797
           +S +LR +L+  KLTG+N +DW RNLR+VLR E  E+VL +P P  +P            
Sbjct: 7   SSFNLRSILEKEKLTGTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRRE-- 64

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                     H+K  +D     C+M+A+M  ELQRQ+E +  + +I  L  ++   ++  
Sbjct: 65  ----------HEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAK 114

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
            F+  K LF  +L EG  VS HV+KMIG  E L  +G  L + L  + IL SLP SFE F
Sbjct: 115 RFNTSKSLFACRLAEGNPVSPHVIKMIGYNETLEKLGFPLSQELATDLILQSLPPSFEPF 174

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASNVV 257
           ILN+NMN    +LT L  MLK  E ++ K    +MV     PN                 
Sbjct: 175 ILNFNMNNMNRTLTKLPGMLKTAEESIKKNSNHVMVMHKRKPN----------------- 217

Query: 256 ALKPKGGTHKKPDISKD-QCVFCRQKGHWKRDCPKF 152
                   +KK   +KD +C FC++ GHWKR+C K+
Sbjct: 218 --------NKKSGPAKDAECFFCKEAGHWKRNCKKY 245


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  170 bits (431), Expect = 1e-39
 Identities = 97/275 (35%), Positives = 138/275 (50%), Gaps = 1/275 (0%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPV-MPXXXXXXXXXXXX 797
           +S +LR +L+  KLTG+NF+DW RNLR+VLR E  E+VL E  P  +P            
Sbjct: 86  SSFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTESFPANLPNNALAAQRRE-- 143

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                     H+K  +D     C+M+A+M  ELQRQ+E +  + +I  L  ++   ++  
Sbjct: 144 ----------HEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAE 193

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
            F+  K LF  +L EG  VS HV+K+IG  E L  +G  L   L  + IL SLP SFE F
Sbjct: 194 RFNTSKSLFACRLAEGNPVSPHVIKIIGYTESLDKLGFPLSRELATDLILQSLPPSFEPF 253

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASNVV 257
           I+N+NMN    +L +LH MLK  E ++ K    +MV     PN+                
Sbjct: 254 IMNFNMNNLNRTLAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITS 313

Query: 256 ALKPKGGTHKKPDISKDQCVFCRQKGHWKRDCPKF 152
               K    K       +C F ++ GHWKR+C K+
Sbjct: 314 TSNSKTKVQKTGPAKDAECFFYKETGHWKRNCKKY 348


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  169 bits (427), Expect = 3e-39
 Identities = 94/275 (34%), Positives = 139/275 (50%), Gaps = 1/275 (0%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPV-MPXXXXXXXXXXXX 797
           ++ +LR +L+  KLTG+NF+DW RNLR+VLR E  E++L +P P  +P            
Sbjct: 84  SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFLLIQPFPADLPNNAPAAQRRK-- 141

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                     H++  +D     C+M+A+M  ELQ Q+E +  + +I  L  ++   ++  
Sbjct: 142 ----------HERRCNDYLDISCLMLATMSPELQSQYEALDAHTIITGLRNMFEDQARAE 191

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
            F+  K LF  +L +G  VS HV+KMIG  E L  +G  L   L  + IL SLP SFE F
Sbjct: 192 RFNTSKFLFAYRLAQGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPF 251

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASNVV 257
           I+N+NMN    +L +LH MLK  E ++ K    +MV     PN+                
Sbjct: 252 IMNFNMNNLNRTLAELHGMLKTAEESIKKNSNYVMVMHKLKPNNKKSGQKRKLNSDEITS 311

Query: 256 ALKPKGGTHKKPDISKDQCVFCRQKGHWKRDCPKF 152
               K    K       +C FC++ GHWKR+C K+
Sbjct: 312 TSNCKTKVQKTGPAKDAECFFCKETGHWKRNCKKY 346


>ref|XP_004977683.1| PREDICTED: uncharacterized protein LOC101759138 [Setaria italica]
          Length = 272

 Score =  164 bits (415), Expect = 8e-38
 Identities = 100/275 (36%), Positives = 148/275 (53%), Gaps = 8/275 (2%)
 Frame = -2

Query: 952 LLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPVMPXXXXXXXXXXXXXXXETLGV 773
           +L+  KL G+NF+DW  NLR+V R EK EYVL++P P  P                    
Sbjct: 1   MLEKEKLNGTNFIDWYCNLRIVFRQEKTEYVLEQPYPDDPLVDANAAARR---------- 50

Query: 772 FAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNLEFDMCKEL 593
            A+QKH DDA    C+M+A+M ++LQ+Q+EH+  + MI  L  ++ +  +   +++ K L
Sbjct: 51  -AYQKHCDDALN--CLMLATMFLDLQKQYEHVDAHTMIEGLRGIFENQVRAERYNISKSL 107

Query: 592 FGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENFILNYNMNK 413
           F  KL EG SVS +V+K+IG IE L  +G +L + L ++ IL  L  S++ FILNY MN 
Sbjct: 108 FACKLAEGSSVSPYVIKIIGYIETLDKLGFELKDHLAIDIILQLLTMSYKPFILNYQMNG 167

Query: 412 TKESLTDLHNMLKNYESTVSKGKA-VLMVSSS-------AAPNSXXXXXXXXXKPASNVV 257
            +++L +LH MLK  + ++ K    V+MV            P           +P S+  
Sbjct: 168 MEKTLLELHGMLKIAKESIKKNPTHVMMVQKENKKRKRWTPPKGKGKGKVVPNEPPSS-- 225

Query: 256 ALKPKGGTHKKPDISKDQCVFCRQKGHWKRDCPKF 152
             K KG +   PD   D+C  C  KGHW R+C K+
Sbjct: 226 KPKRKGKSSPSPD---DECFHCHLKGHWSRNCKKY 257


>emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]
          Length = 276

 Score =  164 bits (415), Expect = 8e-38
 Identities = 92/275 (33%), Positives = 142/275 (51%), Gaps = 1/275 (0%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPV-MPXXXXXXXXXXXX 797
           +S +LR +L+  KL G+NF+DW RNLR+VLR E  E+VL+EP P  +P            
Sbjct: 9   SSFNLRSILEKEKLNGTNFVDWYRNLRIVLRQEHKEFVLEEPFPTDLPNNATAARRRE-- 66

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                     H+K  ++     C+M+ ++  E QRQ++ +  + +I  L  ++   ++  
Sbjct: 67  ----------HEKRCNEYLDISCLMLVTISPEFQRQYQTLDAHTIITRLCNMFEYQARAE 116

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
            F+  K LF  +L EG +VS +V+KMIG  E L  +G  L + L ++ IL SLP SF+ F
Sbjct: 117 RFNTSKSLFACRLAEGNAVSPNVIKMIGYTESLEKLGFPLSKELAIDLILQSLPPSFKPF 176

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASNVV 257
           I+N+NM++T   L +LH MLK  E ++ K    +MV     PN+                
Sbjct: 177 IMNFNMDRT---LAELHGMLKTAEESIKKNSNYVMVMHKCKPNNKKSGQKRKLNSDEITS 233

Query: 256 ALKPKGGTHKKPDISKDQCVFCRQKGHWKRDCPKF 152
               K    K       +C FC++ GHWKR+C K+
Sbjct: 234 TSNSKTKVQKTGPAKDAECFFCKETGHWKRNCKKY 268


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score =  163 bits (413), Expect = 1e-37
 Identities = 93/275 (33%), Positives = 136/275 (49%), Gaps = 1/275 (0%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPV-MPXXXXXXXXXXXX 797
           ++ +LR +L+  KLT +N +DW RNLR+VLR E  E+VL +P P  +P            
Sbjct: 99  SNFNLRYILEKEKLTRTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRRE-- 156

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                     H++   +     C+M+A+M  ELQRQ+E +  + +I  L  ++   ++  
Sbjct: 157 ----------HERRCKEYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAE 206

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
            F+  K LF  +L EG  VS HV+KMIG  E L  +G  L   L  + IL SLP SFE F
Sbjct: 207 RFNTSKSLFACRLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPF 266

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASNVV 257
           I+N+NMN    +L +LH MLK  E ++ K    +MV     PN+                
Sbjct: 267 IMNFNMNNLNRTLAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITS 326

Query: 256 ALKPKGGTHKKPDISKDQCVFCRQKGHWKRDCPKF 152
               K    K       +C F ++ GHWKR+C K+
Sbjct: 327 TSNSKTKVQKTGPAKDAECFFYKETGHWKRNCKKY 361


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  163 bits (413), Expect = 1e-37
 Identities = 93/275 (33%), Positives = 136/275 (49%), Gaps = 1/275 (0%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPV-MPXXXXXXXXXXXX 797
           ++ +LR +L+  KLT +N +DW RNLR+VLR E  E+VL +P P  +P            
Sbjct: 99  SNFNLRYILEKEKLTRTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRRE-- 156

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                     H++   +     C+M+A+M  ELQRQ+E +  + +I  L  ++   ++  
Sbjct: 157 ----------HERRCKEYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAE 206

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
            F+  K LF  +L EG  VS HV+KMIG  E L  +G  L   L  + IL SLP SFE F
Sbjct: 207 RFNTSKSLFACRLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPF 266

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASNVV 257
           I+N+NMN    +L +LH MLK  E ++ K    +MV     PN+                
Sbjct: 267 IMNFNMNNLNRTLAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITS 326

Query: 256 ALKPKGGTHKKPDISKDQCVFCRQKGHWKRDCPKF 152
               K    K       +C F ++ GHWKR+C K+
Sbjct: 327 TSNSKTKVQKTGPAKDAECFFYKETGHWKRNCKKY 361


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1050

 Score =  147 bits (371), Expect(2) = 2e-37
 Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 1/271 (0%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEP-IPVMPXXXXXXXXXXXX 797
           ++ +LR +L+  KLTG NF+DW RNLR+VLR E  E+VL +P +  +P            
Sbjct: 70  SNFNLRSILEKEKLTGINFMDWYRNLRIVLRQEHKEFVLTQPFLADLPNNARAAQRRE-- 127

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                     H+   ++ +   C+M+A+M  ELQRQ+E +  + +I  L  ++   ++  
Sbjct: 128 ----------HEMRCNEYFDISCLMLATMSPELQRQYEALDAHTIITGLCNMFEDQAR-- 175

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
                      +L EG  VS H++KMIG  E L  +G  L + L  + IL SLP SFE F
Sbjct: 176 ---------AERLAEGNPVSPHMIKMIGYTESLDKLGFPLSQELATDLILQSLPPSFEPF 226

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASNVV 257
           I+N+NMN   ++L +LH MLK  + ++ K    +MV   + PN+                
Sbjct: 227 IMNFNMNNLNKTLAELHGMLKTAKESIKKNSNHVMVMHKSKPNNKKSGQKRKLNSDEITS 286

Query: 256 ALKPKGGTHKKPDISKDQCVFCRQKGHWKRD 164
               K    K       +C FC++ GHWKR+
Sbjct: 287 TSNSKTKVQKTGPAKDAECFFCKETGHWKRN 317



 Score = 37.4 bits (85), Expect(2) = 2e-37
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = -3

Query: 138 LLRQAQGLSDSRKVRPEEVDLRVGNGARVAA 46
           + +  QGL  SR +   EVD+RVGNGARVAA
Sbjct: 321 ICKSLQGLKRSRSLARGEVDIRVGNGARVAA 351


>ref|XP_007010461.1| Retrotransposon protein, putative [Theobroma cacao]
           gi|508727374|gb|EOY19271.1| Retrotransposon protein,
           putative [Theobroma cacao]
          Length = 277

 Score =  162 bits (411), Expect = 2e-37
 Identities = 93/245 (37%), Positives = 134/245 (54%), Gaps = 3/245 (1%)
 Frame = -2

Query: 877 EKIEYVLDEPIPVMPXXXXXXXXXXXXXXXETLGVFAHQKHQDDAYTAQCIMIASMEVEL 698
           EK  YV+D PIP +P                     A+Q H+DD   A C+M+ASM +EL
Sbjct: 23  EKKSYVIDTPIPPVPVADASAEDKE-----------AYQCHKDDDDQAACMMLASMTLEL 71

Query: 697 QRQHEHMLPYEMIRHLEKLYASPSQNLEFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKL 518
           Q+QHEHM    MI HL +L+    +   +++ KELF  K+ EG SV  HVLKMIG+IE+L
Sbjct: 72  QKQHEHMDVQSMILHLRELFDREGRIERYEISKELFRCKMAEGSSVRPHVLKMIGLIERL 131

Query: 517 ASIGLKLPETLVVNSILYSLPGSFENFILNYNMNKTKESLTDLHNMLKNYESTVSKGKAV 338
             +GL +   L ++ +L SLP SF  F+LN++MN+ + +L +L NML   + ++ K K  
Sbjct: 132 RQLGLAMDHELSIDLVLQSLPDSFSQFMLNFHMNRLEATLPELLNMLDTAKRSIRKDKGS 191

Query: 337 LMV---SSSAAPNSXXXXXXXXXKPASNVVALKPKGGTHKKPDISKDQCVFCRQKGHWKR 167
           L++   S +                + N  ALKPKGG   K D   D C  C + GHW+R
Sbjct: 192 LLLLSFSKAHTKQQKKKAQKGKKVKSQNEKALKPKGGV--KKDKETDICHHCGKLGHWRR 249

Query: 166 DCPKF 152
           +C ++
Sbjct: 250 NCKEY 254


>ref|XP_006436321.1| hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
           gi|557538517|gb|ESR49561.1| hypothetical protein
           CICLE_v10033628mg, partial [Citrus clementina]
          Length = 263

 Score =  162 bits (410), Expect = 3e-37
 Identities = 101/281 (35%), Positives = 148/281 (52%), Gaps = 4/281 (1%)
 Frame = -2

Query: 982 FIMASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPVMPXXXXXXXXXX 803
           +++ +  L  +L+  +LTG N++DW RNLR++L  EKI YVLD P P             
Sbjct: 2   YLIMNNPLARILENYRLTGPNYVDWFRNLRIILNYEKISYVLDTPKP-----------NE 50

Query: 802 XXXXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQ 623
                       +QK QDD  +A+  ++ASM  ELQRQHE+M           LY+  S+
Sbjct: 51  IPEGTSEAERVTYQKWQDDDLSAKSYILASMSNELQRQHENM---------PNLYSEQSR 101

Query: 622 NLEFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFE 443
            + +++ K+LF  ++ EG SV+EHVLKMI  IE+L ++   +   L ++ IL SLP SF 
Sbjct: 102 TVRYEISKKLFRMRMTEG-SVNEHVLKMIDYIEQLEALNFSMDGELAIDLILQSLPDSFS 160

Query: 442 NFILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASN 263
            FI+N+NMNK + SL +L  ML   E+ + K K V+ +  S+A                 
Sbjct: 161 QFIMNFNMNKMECSLAELLKMLNTAETCIKKPKDVMAIEGSSAKKGKKKKFQP------- 213

Query: 262 VVALKPKGGTHK----KPDISKDQCVFCRQKGHWKRDCPKF 152
               K KGG  K    KP+  K +C  C + GHWKR+C  +
Sbjct: 214 ----KAKGGIKKGKANKPN-DKGKCFHCGKDGHWKRNCKAY 249


>gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550176|gb|ABA92973.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 591

 Score =  160 bits (404), Expect = 1e-36
 Identities = 90/275 (32%), Positives = 137/275 (49%), Gaps = 1/275 (0%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEP-IPVMPXXXXXXXXXXXX 797
           ++ +LR +L+  KLTG+NF+DW  NLR+VLR E  E+VL +P +  +P            
Sbjct: 29  SNFNLRSILEKEKLTGTNFMDWYHNLRIVLRQEHKEFVLTQPFLADLPNNAPATQRRE-- 86

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                     H++  ++     C+M+A+M ++LQRQ+E +  + +I  L  ++   ++  
Sbjct: 87  ----------HERRCNEYLDISCLMLATMSLKLQRQYEALDAHTIITGLRNMFEDQARAE 136

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
            F+  K LF  +L EG  VS HV+KMIG  E L  +G  L   L  + IL SLP SFE F
Sbjct: 137 RFNTSKSLFACRLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPF 196

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASNVV 257
           I+N+NMN    +L +LH  LK  E ++ K    +M      PN+                
Sbjct: 197 IMNFNMNNLNRTLAELHVTLKTAEESIKKNSNHVMGMHKRKPNNKKSGQKRKLNSDEITT 256

Query: 256 ALKPKGGTHKKPDISKDQCVFCRQKGHWKRDCPKF 152
               K    K       +C  C++ GHWKR+C K+
Sbjct: 257 TSNSKTKVQKTGPAKDAECFICKEIGHWKRNCKKY 291


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  158 bits (400), Expect = 4e-36
 Identities = 92/264 (34%), Positives = 131/264 (49%), Gaps = 1/264 (0%)
 Frame = -2

Query: 973 ASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPV-MPXXXXXXXXXXXX 797
           ++ +LR +L+  KLTG+NF+DW RNLR+VLR E  E+VL EP P  +P            
Sbjct: 7   SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRRE-- 64

Query: 796 XXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQNL 617
                     H+K  +D     C+M+A+M  ELQRQ+E +  + +I  L  ++   ++  
Sbjct: 65  ----------HEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAE 114

Query: 616 EFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFENF 437
            F+  K LF  +L EG  VS HV+KMIG  E L  +G  L   L  + IL SLP SFE F
Sbjct: 115 RFNTSKSLFACRLAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPF 174

Query: 436 ILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASNVV 257
           I+N+NMN    +L +LH MLK  E ++ K    +MV     PN+                
Sbjct: 175 IMNFNMNNLNRTLAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITS 234

Query: 256 ALKPKGGTHKKPDISKDQCVFCRQ 185
               K    K       +C FC++
Sbjct: 235 TSNSKTKVQKTGSAKDAECFFCKE 258


>gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Japonica Group]
           gi|108709282|gb|ABF97077.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 262

 Score =  154 bits (388), Expect = 1e-34
 Identities = 90/269 (33%), Positives = 131/269 (48%), Gaps = 1/269 (0%)
 Frame = -2

Query: 976 MASLSLRCLLDTMKLTGSNFLDWQRNLRLVLRLEKIEYVLDEPIPV-MPXXXXXXXXXXX 800
           ++S +LR +L+  +LTG+NF+DW  NL +VLR E  E+VL +P P  +P           
Sbjct: 6   LSSFNLRSILEKEELTGTNFMDWYCNLGIVLRQEHKEFVLTQPFPADLPNNAPVAQRSE- 64

Query: 799 XXXXETLGVFAHQKHQDDAYTAQCIMIASMEVELQRQHEHMLPYEMIRHLEKLYASPSQN 620
                      H+K  +D     C+M+A+M  E QRQ+E +  + +I  L  ++   ++ 
Sbjct: 65  -----------HEKRCNDYLDISCLMLATMSPEFQRQYEALDAHTIITGLRNMFEDQARA 113

Query: 619 LEFDMCKELFGTKLPEGKSVSEHVLKMIGMIEKLASIGLKLPETLVVNSILYSLPGSFEN 440
             F+  K LF  +L EG  VS HV+KMIG  E L  +G  L   L  + IL SLP SFE 
Sbjct: 114 ERFNTLKSLFACRLAEGNPVSLHVIKMIGYTESLDKLGCPLSRELATDLILQSLPPSFEP 173

Query: 439 FILNYNMNKTKESLTDLHNMLKNYESTVSKGKAVLMVSSSAAPNSXXXXXXXXXKPASNV 260
           FI+N+NMN    SL +LH MLK  E ++ K    +MV     PN+              +
Sbjct: 174 FIMNFNMNNLNSSLAELHGMLKTAEESIKKNSNHVMVMHKCKPNNKKSGQKRKLNSDEIM 233

Query: 259 VALKPKGGTHKKPDISKDQCVFCRQKGHW 173
                K    K       +C F ++  HW
Sbjct: 234 STSNSKTKVEKTGPAKDTECFFYKETDHW 262