BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00022787
         (1910 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Mimulus...   869   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   861   0.0  
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...   860   0.0  
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/...   858   0.0  
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   856   0.0  
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   852   0.0  
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   849   0.0  
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   848   0.0  
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              845   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   845   0.0  
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   845   0.0  
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...   843   0.0  
ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   842   0.0  
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob...   840   0.0  
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   840   0.0  
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun...   839   0.0  
ref|XP_006384249.1| hypothetical protein POPTR_0004s11050g [Popu...   839   0.0  
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   837   0.0  
ref|XP_007139381.1| hypothetical protein PHAVU_008G024600g [Phas...   836   0.0  
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   834   0.0  

>gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Mimulus guttatus]
          Length = 1021

 Score =  869 bits (2246), Expect = 0.0
 Identities = 415/494 (84%), Positives = 450/494 (91%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRLGDLVDR DI LPE+PD+ED                ENSERHSQRCDTELKLAVARK+
Sbjct: 528  GRLGDLVDRDDILLPEQPDTEDESLLQKWKWKVKSIKKENSERHSQRCDTELKLAVARKM 587

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            KEEEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRGILEFSEG+PLGKSGL WLKIH+ANL
Sbjct: 588  KEEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGILEFSEGKPLGKSGLRWLKIHVANL 647

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            FANGVDKLSHEGR+ F ENH++D+FDSADRPLEG RWWLNAEDPFQCLAAC+NL EALR+
Sbjct: 648  FANGVDKLSHEGRICFIENHLDDVFDSADRPLEGKRWWLNAEDPFQCLAACINLVEALRN 707

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
            P P+ TISHIPVHQDGSCNGLQHYAALGRDKLGAA VNLVAGEKPADVYSGIAARVL+IM
Sbjct: 708  PSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM 767

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             +DAQKDP+V  +ALHAR LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER   G
Sbjct: 768  KEDAQKDPSVCPDALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAFG 827

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            D+ +IFGAACYAAK+TLTALGQMFEAARSIM+WLG+CAK++ASENEPVRWTTPLGLPVVQ
Sbjct: 828  DETQIFGAACYAAKITLTALGQMFEAARSIMNWLGDCAKIIASENEPVRWTTPLGLPVVQ 887

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRKVGRHL+KTSLQVLTLQ +T+ VMV++QRTAFPPNFVHSLDGSHMMMTA+ACR  G+
Sbjct: 888  PYRKVGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACRNGGL 947

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
             FAGVHDSYWTHACDVD M+RILREKFVELYE PILENLLE FQ+SFP L FPPLP+RGD
Sbjct: 948  TFAGVHDSYWTHACDVDEMSRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGD 1007

Query: 1443 FDLREVLESPYFFN 1484
            FDLR+VLESPYFFN
Sbjct: 1008 FDLRDVLESPYFFN 1021


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  861 bits (2225), Expect = 0.0
 Identities = 409/494 (82%), Positives = 451/494 (91%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            G L DLVDR+D+PLPE+PD+ED                 NSERHSQRCD ELKLAVARK+
Sbjct: 542  GCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKM 601

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+E+GFFYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGRPLG SGL WLKIHLANL
Sbjct: 602  KDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANL 661

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            FA GVDKLSHEGR+ FTENH++DIFDSADRPLEG RWWLNAEDPFQ LAAC+NL+EALRS
Sbjct: 662  FAGGVDKLSHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRS 721

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+ TISHIPVHQDGSCNGLQHYAALGRD+LGA  VNLVAGEKPADVYSGIAARVL+IM
Sbjct: 722  SSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIM 781

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             +DA+KDPA+F +AL AR LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I 
Sbjct: 782  KRDAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIA 841

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            DD E+FGAACYAAK+TLTALG+MF+AARSIMSWLG+CAK++ASEN+PVRWTTPLGLPVVQ
Sbjct: 842  DDVELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQ 901

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+GRHL+KTSLQVLTLQ +TET+MV++QRTAFPPNFVHSLDGSHMMMTA+AC+KAG+
Sbjct: 902  PYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGL 961

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVD MNR+LREKFV+LYETPILENLLESFQ+SFP L FPPLPERGD
Sbjct: 962  NFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGD 1021

Query: 1443 FDLREVLESPYFFN 1484
            FDLREVLESPYFFN
Sbjct: 1022 FDLREVLESPYFFN 1035


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
            gi|462411068|gb|EMJ16117.1| hypothetical protein
            PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  860 bits (2221), Expect = 0.0
 Identities = 410/494 (82%), Positives = 445/494 (90%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            G L DLVDR+D+PLPEEPD+ED                EN ERHSQRCDTELKLAVARK+
Sbjct: 531  GHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAVARKM 590

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF EGRPLGKSGL WLKIHLANL
Sbjct: 591  KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANL 650

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            +A GVDKLS EGR+AFTENH++DIFDS D+PLEG RWWL AEDPFQCLA C+NLAEALRS
Sbjct: 651  YAGGVDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLAEALRS 710

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+  ISHIPVHQDGSCNGLQHYAALGRDKLGAA+VNLV GEKPADVYSGIA RVLEIM
Sbjct: 711  SSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIM 770

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             +DAQKDP VF EAL A+ LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I 
Sbjct: 771  RRDAQKDPVVFPEALRAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSIS 830

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            DDAEIFG ACYAAK+TLTALG+MFEAAR IMSWLGECAK++ASEN+PVRWTTPLGLPVVQ
Sbjct: 831  DDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQ 890

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK GRHL+KTSLQVLTLQ +TE VMV++QRTAFPPNFVHSLD SHMMMTA+AC+KAG+
Sbjct: 891  PYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAIACKKAGL 950

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            +FAGVHDSYWTHACDVD MN+ILREKFV+LYETPILENLLESFQ+SFP L FPPLPERGD
Sbjct: 951  SFAGVHDSYWTHACDVDEMNKILREKFVQLYETPILENLLESFQQSFPALTFPPLPERGD 1010

Query: 1443 FDLREVLESPYFFN 1484
            FDLR+VLESPYFFN
Sbjct: 1011 FDLRDVLESPYFFN 1024


>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223526524|gb|EEF28786.1|
            DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 589

 Score =  858 bits (2216), Expect = 0.0
 Identities = 408/494 (82%), Positives = 450/494 (91%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRLGDLVDR+D+PLPE+P++ED                EN ERHSQRCDTELKLAVARK+
Sbjct: 96   GRLGDLVDRNDVPLPEKPETEDEALVRKWKWKLRAAKKENRERHSQRCDTELKLAVARKM 155

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGRPLGKSGL WLKIHLANL
Sbjct: 156  KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL 215

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            FA GVDKLS++GR+AFTENH++DIFDSADRPLEG RWWLNAEDPFQCLA C++L EALRS
Sbjct: 216  FAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCIDLTEALRS 275

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+  ISH+P+HQDGSCNGLQHYAALGRDKLGAA VNLVAGEKPADVYSGIA RVL+IM
Sbjct: 276  SSPETFISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAVRVLDIM 335

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             KDAQKDP VF +ALHA+ LI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I 
Sbjct: 336  RKDAQKDPKVFPDALHAKILISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIA 395

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            DD EIF A+CYAAKVTLTALG+MFEAARSIMSWLGECAK++ASENEPVRWTTPLGLPVVQ
Sbjct: 396  DDTEIFVASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIASENEPVRWTTPLGLPVVQ 455

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYR  GRHL+KTSLQVLTLQ +TE VMV++QRTAFPPNFVHSLDGSHMMMTA+ C++AG+
Sbjct: 456  PYRNFGRHLIKTSLQVLTLQQETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVTCKRAGL 515

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVD MNRILREKFVELYETP+LENLLESFQ+SFP L FPPLPERGD
Sbjct: 516  NFAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQQSFPTLSFPPLPERGD 575

Query: 1443 FDLREVLESPYFFN 1484
            FDL++VL+SPYFFN
Sbjct: 576  FDLQDVLKSPYFFN 589


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
            RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  856 bits (2212), Expect = 0.0
 Identities = 407/494 (82%), Positives = 449/494 (90%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR D PLPEEPD+ED                EN ERHSQRCD ELKLAVARK+
Sbjct: 528  GRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKM 587

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+L F+EGRPLG+SGL WLKIHLANL
Sbjct: 588  KDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLKIHLANL 647

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            FA GV+KLS EGR+AFTENHM+DIFDSAD+PLEG RWWLNAEDPFQCLA C+NL+EA+RS
Sbjct: 648  FAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRS 707

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+ +ISHIPVHQDGSCNGLQHYAALGRD+LGAA VNLVAGEKPADVYSGIAARVL+IM
Sbjct: 708  SSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIM 767

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             +DAQ+DPA F +A+ AR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I 
Sbjct: 768  KRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIA 827

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLGECAK++ASENEPVRWTTPLGLPVVQ
Sbjct: 828  DDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQ 887

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+GRHL+KTSLQ+LTLQ +TE VMV++QRTAFPPNF+HSLDGSHMMMTA+ACR+AG+
Sbjct: 888  PYRKIGRHLIKTSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGL 947

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVD +NRILREKFVELYETPILE LLESFQ S+P L FPPLPERGD
Sbjct: 948  NFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGD 1007

Query: 1443 FDLREVLESPYFFN 1484
            FDLR+VLESPYFFN
Sbjct: 1008 FDLRDVLESPYFFN 1021


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  852 bits (2200), Expect = 0.0
 Identities = 403/494 (81%), Positives = 447/494 (90%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR D PLPEEPD+ED                EN ERHSQRCD ELKLAVARK+
Sbjct: 527  GRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKM 586

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EE FFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+EGRPLG+SGL WLKIHLANL
Sbjct: 587  KDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANL 646

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            FA GV+KLS EGR+ FTENHM+DIFDS+D+PLEG RWWLNAEDPFQCLA C+NL+EA+RS
Sbjct: 647  FAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRS 706

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+ ++SHIPVHQDGSCNGLQHYAALGRDKLGAA VNLVAGEKPADVYSGIAARVL+IM
Sbjct: 707  SSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM 766

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             +DAQ+DPA F +A+ AR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I 
Sbjct: 767  KRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIA 826

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLGECAK++ASENEPVRWTTPLGLPVVQ
Sbjct: 827  DDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQ 886

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+GRHL+KTSLQ+LTLQ +TE VMV++QRTAFPPNF+HSLDGSHMMMTA+ACR+AG+
Sbjct: 887  PYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGL 946

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVD +NRILREKFVELYE PILE LLESFQ S+P L FPPLPERGD
Sbjct: 947  NFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGD 1006

Query: 1443 FDLREVLESPYFFN 1484
            FD+R+VLESPYFFN
Sbjct: 1007 FDMRDVLESPYFFN 1020


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score =  849 bits (2193), Expect = 0.0
 Identities = 401/494 (81%), Positives = 445/494 (90%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR D+PLPEEPD+ED                EN ERHSQRCD ELKLAVA ++
Sbjct: 529  GRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRM 588

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+ GRPLGKSGL WLKIHLANL
Sbjct: 589  KDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGKSGLRWLKIHLANL 648

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            FA GVDKLS +GR+AFTE+H++DIFDSAD+PLEG  WWLNAEDPFQCLA C+NL+EA+RS
Sbjct: 649  FAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRCWWLNAEDPFQCLAVCINLSEAVRS 708

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+  ISH+PVHQDGSCNGLQHYAALGRDKLGAA VNLVAGEKPADVYSGIAARVL+IM
Sbjct: 709  SSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM 768

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
            N+DAQ+DPA F +A+ AR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I 
Sbjct: 769  NRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIA 828

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            DD E+FGAACYAAKVTLTALG+MFEAARSIM+WLGECAK++ASENEPVRWTTPLGLPVVQ
Sbjct: 829  DDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQ 888

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+GRH +KTSLQ+LTLQ +TE VMV++QRTAFPPNF+HSLDGSHMMMTA+ACR+AG+
Sbjct: 889  PYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGL 948

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVD +NRILREKFVELYETPILE LLE FQ S+P L FPPLPERGD
Sbjct: 949  NFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLEGFQVSYPTLSFPPLPERGD 1008

Query: 1443 FDLREVLESPYFFN 1484
            FDLR+V+ESPYFFN
Sbjct: 1009 FDLRDVIESPYFFN 1022


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] gi|17221595|dbj|BAB78465.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  848 bits (2192), Expect = 0.0
 Identities = 401/494 (81%), Positives = 446/494 (90%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR D PLPEEPD+ED                EN ERHSQRCD ELKLAVARK+
Sbjct: 527  GRLADLVDRDDAPLPEEPDTEDEALLPKWRWKVKSVKKENRERHSQRCDIELKLAVARKM 586

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EE FFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+EGRPLG+SGL WLKIHLANL
Sbjct: 587  KDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANL 646

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            FA GV+KLS EGR+ FTENHM+DIFDS+D+PLEG RWWLNAEDPFQCLA C+NL+EA+RS
Sbjct: 647  FAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRS 706

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+ ++SHIPVHQDGSCNGLQHYAALGRDKLGAA VNLVAGEKPA+ YSGIAARVL+IM
Sbjct: 707  SSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIAARVLDIM 766

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             +DAQ+DPA F +A+ AR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I 
Sbjct: 767  KRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIA 826

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLGECAK++ASENEPVRWTTPLGLPVVQ
Sbjct: 827  DDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQ 886

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+GRHL+KTSLQ+LTLQ +TE VMV++QRTAFPPNF+HSLDGSHMMMTA+ACR+AG+
Sbjct: 887  PYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGL 946

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVD +NRILREKFVELYE PILE LLESFQ S+P L FPPLPERGD
Sbjct: 947  NFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGD 1006

Query: 1443 FDLREVLESPYFFN 1484
            FD+R+VLESPYFFN
Sbjct: 1007 FDMRDVLESPYFFN 1020


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  845 bits (2184), Expect = 0.0
 Identities = 406/494 (82%), Positives = 444/494 (89%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR D+PLPEEPD+ED                ENSERHSQRCD ELKLAVARK+
Sbjct: 317  GRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKM 376

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+E+GFFYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGRPLGKSGL WLKIHLAN+
Sbjct: 377  KDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANV 436

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            +A GVDKLS+EGR+AFTENH+EDIFDSADRPLEG RWWL+AEDPFQCLA C+NL+EALRS
Sbjct: 437  YAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRS 496

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+ TISH+PVHQDGSCNGLQHYAALGRDKLGAA VNLVAGEKPADVYSGIAARVL+IM
Sbjct: 497  SSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM 556

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             +DAQKDPA    AL AR LI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I 
Sbjct: 557  QRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIA 616

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            D+ E+F A+CYAAK TLTALG+MFEAARSIMSWLG+CAKV+ASEN PVRW TPLGLPVVQ
Sbjct: 617  DEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQ 676

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+GRHL+KTSLQVL+LQ +T+ VMV++QRTAFPPNFVHSLDGSHMMMTA+AC+KAG+
Sbjct: 677  PYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGL 736

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVD MNRILREKFVELY  PILENLLE FQ+SFP L FPPLPERGD
Sbjct: 737  NFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGD 796

Query: 1443 FDLREVLESPYFFN 1484
            FDLREVLESPYFFN
Sbjct: 797  FDLREVLESPYFFN 810


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  845 bits (2184), Expect = 0.0
 Identities = 406/494 (82%), Positives = 444/494 (89%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR D+PLPEEPD+ED                ENSERHSQRCD ELKLAVARK+
Sbjct: 485  GRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKM 544

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+E+GFFYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGRPLGKSGL WLKIHLAN+
Sbjct: 545  KDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANV 604

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            +A GVDKLS+EGR+AFTENH+EDIFDSADRPLEG RWWL+AEDPFQCLA C+NL+EALRS
Sbjct: 605  YAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRS 664

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+ TISH+PVHQDGSCNGLQHYAALGRDKLGAA VNLVAGEKPADVYSGIAARVL+IM
Sbjct: 665  SSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM 724

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             +DAQKDPA    AL AR LI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I 
Sbjct: 725  QRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIA 784

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            D+ E+F A+CYAAK TLTALG+MFEAARSIMSWLG+CAKV+ASEN PVRW TPLGLPVVQ
Sbjct: 785  DEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQ 844

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+GRHL+KTSLQVL+LQ +T+ VMV++QRTAFPPNFVHSLDGSHMMMTA+AC+KAG+
Sbjct: 845  PYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGL 904

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVD MNRILREKFVELY  PILENLLE FQ+SFP L FPPLPERGD
Sbjct: 905  NFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGD 964

Query: 1443 FDLREVLESPYFFN 1484
            FDLREVLESPYFFN
Sbjct: 965  FDLREVLESPYFFN 978


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score =  845 bits (2183), Expect = 0.0
 Identities = 401/494 (81%), Positives = 445/494 (90%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR D PLPEEPD+ED                EN ERHSQRCD ELKLAVA ++
Sbjct: 526  GRLADLVDRDDAPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRM 585

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+ GRPLG+SGL WLKIHLANL
Sbjct: 586  KDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLANL 645

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            FA GVDKLS +GR+AFTE+H++DIFDSAD+PLEG RWWLNAEDPFQCLA C+NL+EA+RS
Sbjct: 646  FAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRS 705

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+  ISHIPVHQDGSCNGLQHYAALGRDKLGAA VNLVAGEKPADVYSGIAARVL+IM
Sbjct: 706  SSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM 765

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
            N+DAQ+DPA F +A+ AR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I 
Sbjct: 766  NRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIA 825

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            DD+E+FGAA YAAKVTLTALG+MFEAARSIM+WL ECAK++ASENEPVRWTTPLGLPVVQ
Sbjct: 826  DDSELFGAASYAAKVTLTALGEMFEAARSIMTWLAECAKIIASENEPVRWTTPLGLPVVQ 885

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+GRH +KTSLQ+LTLQ +TE VMV++QRTAFPPNF+HSLDGSHMMMTA+ACR+AG+
Sbjct: 886  PYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGL 945

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVD +NRILREKFVELYETPILE LLESFQ S+P L FPPLPERGD
Sbjct: 946  NFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQVSYPTLSFPPLPERGD 1005

Query: 1443 FDLREVLESPYFFN 1484
            FDLR+V+ESPYFFN
Sbjct: 1006 FDLRDVIESPYFFN 1019


>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score =  843 bits (2177), Expect = 0.0
 Identities = 397/494 (80%), Positives = 446/494 (90%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR+D+PLPE+PD+ED                ENSERHSQRCD ELKLAVARK+
Sbjct: 483  GRLADLVDRTDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKM 542

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGRPLGKSGL WLKIHLANL
Sbjct: 543  KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANL 602

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            +A GVDKLS++GR+AFTENH+E+IFDSADRPLEG RWWL AEDPFQCLA CMNL EALRS
Sbjct: 603  YAGGVDKLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRS 662

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+ TISHIPVHQDGSCNGLQHYAALGRDKLGA  VNLVAGEKPADVY+GIA RVLEIM
Sbjct: 663  SSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIM 722

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
              DAQKDP++  +   AR +++QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKERG I 
Sbjct: 723  RMDAQKDPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIP 782

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            D+AE+FGA+CYAAKVTLTALG+MF+AAR IM+WLG+CAKV+A ENEPVRWTTPLGLPVVQ
Sbjct: 783  DEAELFGASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQ 842

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+GRHL+KTSLQVLTLQ +T+ VMV++QRTAFPPNFVHSLDGSHMMMTA+AC++ G+
Sbjct: 843  PYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGL 902

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVD MN+ILREKFVELY+TPILENLLESF++SFP L FPPLPERGD
Sbjct: 903  NFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGD 962

Query: 1443 FDLREVLESPYFFN 1484
            FD++EVLESPYFFN
Sbjct: 963  FDMKEVLESPYFFN 976


>ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 1262

 Score =  842 bits (2174), Expect = 0.0
 Identities = 406/494 (82%), Positives = 442/494 (89%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDRSD+PL E+PD+ED                EN ERHSQRCD ELKLAVARK+
Sbjct: 770  GRLADLVDRSDVPLLEKPDTEDETLLKKWKWKVNNVKKENRERHSQRCDIELKLAVARKM 829

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EEGF++PHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGRPLGKSGL WLKIHLANL
Sbjct: 830  KDEEGFYFPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL 889

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            +A GVDKLS EGRLAFTENH++DIFDS DRPLEG RWWL AEDPFQCLA C+NL EALRS
Sbjct: 890  YAGGVDKLSLEGRLAFTENHLDDIFDSMDRPLEGRRWWLKAEDPFQCLAVCINLTEALRS 949

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+  ISHIPVHQDGSCNGLQHYAALGRDKLGAA VNLVAGEKPADVYSGIAARVL IM
Sbjct: 950  SSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLNIM 1009

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
              DAQKDP VF +AL AR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I 
Sbjct: 1010 QSDAQKDPEVFPDALRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIS 1069

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            +D ++FG ACYAAKVTL ALGQMFEAARSIMSWLG+CAK++ASENE VRWTTPLGLPVVQ
Sbjct: 1070 ED-DVFGCACYAAKVTLAALGQMFEAARSIMSWLGDCAKIIASENETVRWTTPLGLPVVQ 1128

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK GRHL+KTSLQ+LTLQ +TE +MV++QRTAFPPNFVHSLDGSHMMMTA+AC++AG+
Sbjct: 1129 PYRKYGRHLIKTSLQILTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGL 1188

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILE LLESFQ+SFP L FPPLPERGD
Sbjct: 1189 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILERLLESFQQSFPTLTFPPLPERGD 1248

Query: 1443 FDLREVLESPYFFN 1484
            F+LR+VLESPYFFN
Sbjct: 1249 FELRDVLESPYFFN 1262


>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|590698457|ref|XP_007045722.1| DNA-directed RNA
            polymerase isoform 1 [Theobroma cacao]
            gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
            DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 996

 Score =  840 bits (2171), Expect = 0.0
 Identities = 397/494 (80%), Positives = 448/494 (90%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GR+  LVDR D+PLPE+PD+ED                +N+ERHS RCD ELKLAVARK+
Sbjct: 503  GRVASLVDREDVPLPEKPDTEDEAEIQKWKWKVKAANKQNNERHSLRCDVELKLAVARKM 562

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            ++E+GF+YPHNLDFRGRAYPMHP+LNHLGSD+CRG+LEF+EGRPLGKSGL WLKIHLANL
Sbjct: 563  RDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANL 622

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            +A GVDKLS+EGR+AFTENH++DIFDSADRPLEG RWWL+AEDPFQCLAAC+NL+EALRS
Sbjct: 623  YAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRS 682

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+ TISH+PVHQDGSCNGLQHYAALGRDKLGAA+VNLVAGEKPADVYSGIAARV++IM
Sbjct: 683  SSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIM 742

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             +DA+KDPA+   ALHAR LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I 
Sbjct: 743  RRDAEKDPAINPHALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIA 802

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            DD E+F A+CYAA+ TLTALG+MF+AARSIM+WLGECAKV++SEN+PVRW TPLGLPVVQ
Sbjct: 803  DDTEMFVASCYAARTTLTALGEMFQAARSIMNWLGECAKVISSENQPVRWVTPLGLPVVQ 862

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYR++GRHL+KTSLQVLTLQ +T+ VM ++QRTAFPPNFVHSLDGSHMMMTA+AC+KAG+
Sbjct: 863  PYRQLGRHLIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL 922

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVD MNRILREKFVELYE PILENLLESFQ+SFP L FPPLPERGD
Sbjct: 923  NFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPSLNFPPLPERGD 982

Query: 1443 FDLREVLESPYFFN 1484
            FDLREVLESPYFFN
Sbjct: 983  FDLREVLESPYFFN 996


>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Setaria italica]
          Length = 1005

 Score =  840 bits (2170), Expect = 0.0
 Identities = 394/494 (79%), Positives = 447/494 (90%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR+D+PLPE+PD+ED                 NSERHSQRCD ELKLAVARK+
Sbjct: 512  GRLADLVDRTDVPLPEKPDTEDETVLKKWRWHTRSVKKGNSERHSQRCDVELKLAVARKM 571

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRG+LEF+EGRPLG+SGL WLKIHLANL
Sbjct: 572  KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGESGLRWLKIHLANL 631

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            +A GVDKLS+ GR+AF ENH+E+IFDSADRPLEG RWWL AEDPFQCLA CMNL EALRS
Sbjct: 632  YAGGVDKLSYAGRIAFAENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRS 691

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
            P P+ATISHIPVHQDGSCNGLQHYAALGRDKLGA  VNLVAGEKPADVYSGIA RV+EIM
Sbjct: 692  PSPEATISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYSGIATRVVEIM 751

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             +D+QKDP+   +A  AR +++QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKERG I 
Sbjct: 752  RRDSQKDPSTDPDAARARLILDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIA 811

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            DDAE+FGA+CYAAKVTLTALG+MF+AARSIM+WLG+CAKV+A ENEPV+WTTPLGLPVVQ
Sbjct: 812  DDAELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVKWTTPLGLPVVQ 871

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+GRHL+KTSLQVLTLQ +T+ VMV++QRTAFPPNFVHSLDGSHMMMTA+AC++ G+
Sbjct: 872  PYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGL 931

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACDVD MN+ILREKFVELY+TPILENLLESF++SFP L FPPLPERGD
Sbjct: 932  NFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGD 991

Query: 1443 FDLREVLESPYFFN 1484
            FD+++VLESPYFFN
Sbjct: 992  FDMKDVLESPYFFN 1005


>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
            gi|462422319|gb|EMJ26582.1| hypothetical protein
            PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score =  839 bits (2168), Expect = 0.0
 Identities = 400/494 (80%), Positives = 440/494 (89%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR D+PLPEEPD+ED                ENSERHSQRCD ELKLA +RK+
Sbjct: 513  GRLADLVDREDVPLPEEPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKM 572

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFSEGR LGKSGL WLKIHLANL
Sbjct: 573  KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANL 632

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            +A GVDKLS + R AFTENH+++IFDSADRPLEG RWWL AEDPFQCLAAC+NL EALRS
Sbjct: 633  YAGGVDKLSFDDRAAFTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRS 692

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
            P P+ TIS++PVHQDGSCNGLQHYAALGRDKLGAA VNLV G+KPADVYSGIAARVL+IM
Sbjct: 693  PSPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIM 752

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
              DA+KDPA    ALHAR LINQVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKERG I 
Sbjct: 753  RNDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIA 812

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            DD  +F AACYAA+ TLTALG+MFEAARSIMSWLGECAKV+ASEN+PVRW TPLGLPVVQ
Sbjct: 813  DDTALFAAACYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQ 872

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYR++GRHL+KTSLQVLTLQ +T+ VMV++QRTAFPPNFVHSLDGSHMMMTA+AC+KAG+
Sbjct: 873  PYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL 932

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            NFAGVHDSYWTHACD+D MNRILREKFVELYE PILENLLE FQ+SFP L FPPLP+RGD
Sbjct: 933  NFAGVHDSYWTHACDIDEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGD 992

Query: 1443 FDLREVLESPYFFN 1484
            FDLR+VLESPYFFN
Sbjct: 993  FDLRDVLESPYFFN 1006


>ref|XP_006384249.1| hypothetical protein POPTR_0004s11050g [Populus trichocarpa]
            gi|550340795|gb|ERP62046.1| hypothetical protein
            POPTR_0004s11050g [Populus trichocarpa]
          Length = 546

 Score =  839 bits (2167), Expect = 0.0
 Identities = 399/494 (80%), Positives = 448/494 (90%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDRSD+PLPE+P++ED                EN ERHS+RCDTELK+AVARK+
Sbjct: 54   GRLADLVDRSDVPLPEKPETEDEALLKKWKWKVKSVKKENRERHSRRCDTELKIAVARKM 113

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGRPLGKSGL WLKIHLANL
Sbjct: 114  KNEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL 173

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            FA GVDKLSHEGR+AFTENH++DIFDSAD+PLEG RWWL+AEDPFQCLA C+NL EALRS
Sbjct: 174  FACGVDKLSHEGRIAFTENHLDDIFDSADKPLEGKRWWLHAEDPFQCLAVCINLTEALRS 233

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+  +SHIP+HQDGSCNGLQHYAALGRDKLGAA VNLVAGEKP DVYSGIAARVL+IM
Sbjct: 234  SSPETCLSHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPTDVYSGIAARVLDIM 293

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
              DAQ+DP VF +AL ARRLI+QVDRKLVKQTVMTSVYGVTYIGARDQI+RRLKERG + 
Sbjct: 294  RSDAQEDPEVFPDALRARRLISQVDRKLVKQTVMTSVYGVTYIGARDQIERRLKERG-LT 352

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            D++EIFG +CYAAKVTLTALG+MFEAARSIM+WLGECAK++ASENEPVRWTTPLGLPVVQ
Sbjct: 353  DNSEIFGCSCYAAKVTLTALGEMFEAARSIMNWLGECAKIIASENEPVRWTTPLGLPVVQ 412

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+G+H++KTSLQ LTLQ +T+ VMV++QRTAFPPNFVHSLDGSHMMMTA+AC++AG+
Sbjct: 413  PYRKLGKHVIKTSLQFLTLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGL 472

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
             FAGVHDSYWTHACDVD MNRILREKFVELYETPIL+NLLESFQ+SFP L FPPLPE GD
Sbjct: 473  KFAGVHDSYWTHACDVDEMNRILREKFVELYETPILKNLLESFQKSFPTLSFPPLPEWGD 532

Query: 1443 FDLREVLESPYFFN 1484
            F+LR+VLESPYFFN
Sbjct: 533  FELRQVLESPYFFN 546


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score =  837 bits (2163), Expect = 0.0
 Identities = 397/494 (80%), Positives = 441/494 (89%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR D+PLPEEPD+ED                EN ERHSQRCD ELKLAVARK+
Sbjct: 500  GRLADLVDREDVPLPEEPDTEDEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKM 559

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFSEGRPLGKSGL WLKIHLAN+
Sbjct: 560  KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANV 619

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            +  GVDKLS+EGR AF+ENH+EDIFDSADRPLEG RWWL AEDPFQCLA C+N++EALRS
Sbjct: 620  YGGGVDKLSYEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEALRS 679

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
            P P+ +ISH+P+HQDGSCNGLQHYAALGRDKLGAA VNLVAG+KPADVYSGIAARVL+IM
Sbjct: 680  PSPETSISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIM 739

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             +DA KDPA     + AR LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I 
Sbjct: 740  KRDADKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIE 799

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            DD E+F AACYAAK TLTALG+MFEAARSIMSWLG+CAK++A EN+PVRWTTPLGLPVVQ
Sbjct: 800  DDNELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQ 859

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+GRHL+KTSLQ+LTLQ +T+ VMV++QRTAFPPNFVHSLDGSHMMMTA+ C++AG+
Sbjct: 860  PYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAITCKEAGL 919

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            +FAGVHDSYWTHA DVD MN+ILREKFVELY+ PILENLLESFQ+SFP L FPPLPERGD
Sbjct: 920  SFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGD 979

Query: 1443 FDLREVLESPYFFN 1484
            FDLREVLESPYFFN
Sbjct: 980  FDLREVLESPYFFN 993


>ref|XP_007139381.1| hypothetical protein PHAVU_008G024600g [Phaseolus vulgaris]
            gi|561012514|gb|ESW11375.1| hypothetical protein
            PHAVU_008G024600g [Phaseolus vulgaris]
          Length = 1068

 Score =  836 bits (2160), Expect = 0.0
 Identities = 393/494 (79%), Positives = 441/494 (89%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR D+PLP+EPD++D                EN ER+S RCD ELKLAVARK+
Sbjct: 575  GRLADLVDRDDVPLPDEPDTDDEAKIKKWKWKVKSVQKENRERYSLRCDIELKLAVARKM 634

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EEGF+YPHN+DFRGRAYPMHPHLNHLGSD+CRGILEF++GRPLGKSGL WLKIHLANL
Sbjct: 635  KDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGKSGLQWLKIHLANL 694

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            +A GVDKLSHEGRLAF+ENH EDIFDSAD+PLEG RWWL AEDP QCLA C+ L EALRS
Sbjct: 695  YAGGVDKLSHEGRLAFSENHFEDIFDSADKPLEGRRWWLKAEDPLQCLAVCITLTEALRS 754

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
            P P+  ISHIPVHQDGSCNGLQHYAALGRDKLGA  VNLVAGEKPADVYSGIAARV  IM
Sbjct: 755  PSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVAGEKPADVYSGIAARVSNIM 814

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
            ++DAQKDPA+F +A+HAR L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER  I 
Sbjct: 815  HRDAQKDPAIFPDAVHARNLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERNAIS 874

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            +DAE+FGA+CYAAKVTLTAL +MF+ AR IM+WLG+CAK++ASEN+PVRW+TPLGLPVVQ
Sbjct: 875  EDAELFGASCYAAKVTLTALEEMFQGARGIMTWLGDCAKIIASENQPVRWSTPLGLPVVQ 934

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+G H++KTSLQ+LTLQ +T+ VMVR+QRTAFPPNFVHSLDGSHMMMTA+AC+K G+
Sbjct: 935  PYRKLGTHIIKTSLQMLTLQRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACKKEGL 994

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
            +FAGVHDSYWTHACDVD MNR+LREKFVELYETP+LENLLESFQ SFP L FPPLPERGD
Sbjct: 995  DFAGVHDSYWTHACDVDKMNRLLREKFVELYETPVLENLLESFQSSFPSLSFPPLPERGD 1054

Query: 1443 FDLREVLESPYFFN 1484
            FDLREVLESPYFFN
Sbjct: 1055 FDLREVLESPYFFN 1068


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score =  834 bits (2154), Expect = 0.0
 Identities = 399/494 (80%), Positives = 443/494 (89%)
 Frame = +3

Query: 3    GRLGDLVDRSDIPLPEEPDSEDGXXXXXXXXXXXXXXXENSERHSQRCDTELKLAVARKL 182
            GRL DLVDR+D+PLPE+P++ED                EN ERHSQRCD ELKL+VARK+
Sbjct: 533  GRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKM 592

Query: 183  KEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLGWLKIHLANL 362
            K+EEGF+YPHN+DFRGRAYPMHP+LNHLGSD+CRGILEF+EGR LGKSGL WLKIHLANL
Sbjct: 593  KDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANL 652

Query: 363  FANGVDKLSHEGRLAFTENHMEDIFDSADRPLEGNRWWLNAEDPFQCLAACMNLAEALRS 542
            +A GVDKLSHEGRLAFTENH++DIFDSAD+PLEG RWWL AEDPFQCLA C+NL EALRS
Sbjct: 653  YAGGVDKLSHEGRLAFTENHLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLTEALRS 712

Query: 543  PFPDATISHIPVHQDGSCNGLQHYAALGRDKLGAATVNLVAGEKPADVYSGIAARVLEIM 722
              P+  ISHIPVHQDGSCNGLQHYAALGRD LGAA VNLVA EKPADVYSGIAARVL I+
Sbjct: 713  SSPETFISHIPVHQDGSCNGLQHYAALGRDTLGAAAVNLVAREKPADVYSGIAARVLVII 772

Query: 723  NKDAQKDPAVFTEALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGDIG 902
             +DAQ+DPAVF +AL A+ L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG   
Sbjct: 773  QRDAQRDPAVFPDALRAKLLLSQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAPM 832

Query: 903  DDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGECAKVVASENEPVRWTTPLGLPVVQ 1082
            ++AE+FGA+CYAAKVTLTALG+MF+AAR IMSWLGECAK++ASEN+PVRWTTPLGLPVVQ
Sbjct: 833  EEAELFGASCYAAKVTLTALGEMFQAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQ 892

Query: 1083 PYRKVGRHLVKTSLQVLTLQHDTETVMVRKQRTAFPPNFVHSLDGSHMMMTALACRKAGM 1262
            PYRK+GRH VKTSLQ+LTLQ +TE VMV++QRTAFPPNFVHSLDGSHMMMTA+ACRKAG+
Sbjct: 893  PYRKLGRHTVKTSLQILTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGL 952

Query: 1263 NFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQRSFPGLPFPPLPERGD 1442
             FAGVHDSYWTHACDVD MNRILREKFVELYE PILENLL+SFQ+SFP L FPPLPERGD
Sbjct: 953  TFAGVHDSYWTHACDVDEMNRILREKFVELYEMPILENLLDSFQKSFPKLVFPPLPERGD 1012

Query: 1443 FDLREVLESPYFFN 1484
            FDLREVL SPYFFN
Sbjct: 1013 FDLREVLGSPYFFN 1026