BLASTX nr result
ID: Mentha29_contig00021766
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00021766
(534 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus... 279 3e-73
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise... 268 8e-70
gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh... 263 2e-68
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode... 263 2e-68
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a... 260 1e-67
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub... 260 1e-67
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum... 260 1e-67
gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu... 258 8e-67
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a... 256 3e-66
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub... 254 7e-66
emb|CBI21137.3| unnamed protein product [Vitis vinifera] 254 7e-66
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 254 7e-66
ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theob... 251 1e-64
ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theob... 251 1e-64
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob... 251 1e-64
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr... 246 3e-63
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub... 245 5e-63
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun... 242 3e-62
ref|XP_004157128.1| PREDICTED: DNA-directed RNA polymerase D sub... 241 8e-62
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub... 241 8e-62
>gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus guttatus]
Length = 1211
Score = 279 bits (714), Expect = 3e-73
Identities = 132/177 (74%), Positives = 148/177 (83%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
+LI YLFPHL +P QKA FL YMVKC+LEA+KGRRKV+NRDD RNK
Sbjct: 379 DLIKNYLFPHLKTPIQKACFLGYMVKCLLEAYKGRRKVENRDDFRNKRLELAGELLEREL 438
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
RVHIKH ER M KAMQRDLY+DREVQSID YLDASI+TNGLSRAF TGAW HP+KRME
Sbjct: 439 RVHIKHAERRMTKAMQRDLYRDREVQSIDQYLDASIVTNGLSRAFSTGAWCHPFKRMERT 498
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA++R+TNPLQA+ D+R+TRQQVSYTGRVGDARYP+PSHWGKVCFLSTPDGENC
Sbjct: 499 SGVVATIRRTNPLQAIADMRKTRQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENC 555
>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
Length = 1205
Score = 268 bits (684), Expect = 8e-70
Identities = 126/177 (71%), Positives = 146/177 (82%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E +LFPHL S QKA FLAYMVKC+LE +KGRRKVDNRDD+RNK
Sbjct: 375 EYFQIHLFPHLKSSVQKACFLAYMVKCLLECYKGRRKVDNRDDLRNKRLELAGELLEREL 434
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
R+ IKH ER M+++MQRDL K R++Q+IDHYLDASIITNGLSRAF TGAW HPYKRME I
Sbjct: 435 RIQIKHAERRMMRSMQRDLDKGRDLQTIDHYLDASIITNGLSRAFSTGAWSHPYKRMERI 494
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+G+VA+LR+TNPLQA+ D+R+TRQQVSYTGRVGDARYP+PSHWGK+CFLSTPDGENC
Sbjct: 495 SGIVATLRRTNPLQAIADMRKTRQQVSYTGRVGDARYPHPSHWGKICFLSTPDGENC 551
>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
Length = 821
Score = 263 bits (672), Expect = 2e-68
Identities = 126/168 (75%), Positives = 140/168 (83%)
Frame = -3
Query: 505 HLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHVER 326
+L S GQKA L YMVKC+LEA++GRRKVDNRDD RNK RVHIKH ER
Sbjct: 1 NLKSFGQKARLLGYMVKCLLEAYRGRRKVDNRDDFRNKRLELAGELLERELRVHIKHAER 60
Query: 325 SMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMIAGVVASLRQ 146
M KAMQRDLY+DRE+QSID YLDASIITNGLSRAF TGAW HPYKRME I+GVVA+LR+
Sbjct: 61 RMTKAMQRDLYRDREIQSIDSYLDASIITNGLSRAFSTGAWSHPYKRMERISGVVATLRR 120
Query: 145 TNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
TNPLQ + D+R+TRQQVSYTGRVGDARYP+PSHWGK+CFLSTPDGENC
Sbjct: 121 TNPLQTMADMRKTRQQVSYTGRVGDARYPHPSHWGKICFLSTPDGENC 168
>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron
macrophyllum]
Length = 1019
Score = 263 bits (672), Expect = 2e-68
Identities = 122/175 (69%), Positives = 144/175 (82%)
Frame = -3
Query: 526 ISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXXRV 347
+S YLFP+L+ QKA FL YMVKC+L+A+ GRRK+DNRDD RNK RV
Sbjct: 193 LSNYLFPNLSGFRQKARFLGYMVKCLLQAYTGRRKIDNRDDFRNKRLELAGELLERELRV 252
Query: 346 HIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMIAG 167
H+KH ER MVKAMQRDLY +R + +I+HYLDASIITNGLSRAF TGAW HPYK+ME I+G
Sbjct: 253 HVKHAERRMVKAMQRDLYGERVIHAIEHYLDASIITNGLSRAFSTGAWSHPYKKMERISG 312
Query: 166 VVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
VVA+LR+TNPLQ + D+R+TRQQVSYTG+VGDARYP+PSHWGK+CFLSTPDGENC
Sbjct: 313 VVATLRRTNPLQTIADMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENC 367
>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1217
Score = 260 bits (665), Expect = 1e-67
Identities = 124/177 (70%), Positives = 142/177 (80%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E I+ YLFP+L+ QKA FL YMVKC+L +F GRRKVDNRDD RNK
Sbjct: 390 ECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLEREL 449
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
R HIKH ER MVKAMQRDLY DR+VQ I+HYLDASIITNGLSRAF TG W HPYKRME +
Sbjct: 450 RAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERV 509
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+LR+TNPLQ D+R++RQQV+YTG+VGDARYP+PSHWGK+CFLSTPDGENC
Sbjct: 510 SGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENC 566
>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
lycopersicum]
Length = 1217
Score = 260 bits (665), Expect = 1e-67
Identities = 124/177 (70%), Positives = 142/177 (80%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E I+ YLFP+L+ QKA FL YMVKC+L +F GRRKVDNRDD RNK
Sbjct: 390 ECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLEREL 449
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
R HIKH ER MVKAMQRDLY DR+VQ I+HYLDASIITNGLSRAF TG W HPYKRME +
Sbjct: 450 RAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERV 509
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+LR+TNPLQ D+R++RQQV+YTG+VGDARYP+PSHWGK+CFLSTPDGENC
Sbjct: 510 SGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENC 566
>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
Length = 1123
Score = 260 bits (665), Expect = 1e-67
Identities = 124/177 (70%), Positives = 142/177 (80%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E I+ YLFP+L+ QKA FL YMVKC+L +F GRRKVDNRDD RNK
Sbjct: 384 ECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLEREL 443
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
R HIKH ER MVKAMQRDLY DR+VQ I+HYLDASIITNGLSRAF TG W HPYKRME +
Sbjct: 444 RAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERV 503
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+LR+TNPLQ D+R++RQQV+YTG+VGDARYP+PSHWGK+CFLSTPDGENC
Sbjct: 504 SGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENC 560
>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
Length = 1018
Score = 258 bits (658), Expect = 8e-67
Identities = 124/177 (70%), Positives = 141/177 (79%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E I YLFP+L+ QKA FL YMVKC+L ++ GRRKVDNRDD RNK
Sbjct: 390 ECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAGELLEREL 449
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
RVH+KH ER MVKA+QRDL DR+VQ I+HYLDASIITNGLSRAF TG W HPYKRME +
Sbjct: 450 RVHVKHAERRMVKALQRDLCGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERV 509
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+LR+TNPLQ DLR+TRQQV+YTG+VGDARYP+PSHWGKVCFLSTPDGENC
Sbjct: 510 SGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENC 566
>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1219
Score = 256 bits (653), Expect = 3e-66
Identities = 123/177 (69%), Positives = 140/177 (79%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E I YLFP+L+ QKA FL YMVKC+L ++ GRRKVDNRDD RNK
Sbjct: 388 ECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAGELLEREL 447
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
R HIKH ER MVKA+QRDL DR+VQ ++HYLDASIITNGLSRAF TG W HPYKRME +
Sbjct: 448 RAHIKHAERRMVKALQRDLCGDRQVQPLEHYLDASIITNGLSRAFSTGHWCHPYKRMERV 507
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+LR+TNPLQ DLR+TRQQV+YTG+VGDARYP+PSHWGKVCFLSTPDGENC
Sbjct: 508 SGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENC 564
>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
lycopersicum]
Length = 1219
Score = 254 bits (650), Expect = 7e-66
Identities = 124/177 (70%), Positives = 139/177 (78%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E I YLFP+L+ QKA FL YMVKC+L ++ GRRKVDNRDD RNK
Sbjct: 388 ECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAGELLEREL 447
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
RVHIKH ER MVKA+QRDL DR+V I+HYLDASIITNGLSRAF TG W HPYKRME +
Sbjct: 448 RVHIKHAERRMVKALQRDLCGDRQVHPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERV 507
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+LR+TNPLQ DLR+TRQQV+YTG+VGDARYP PSHWGKVCFLSTPDGENC
Sbjct: 508 SGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDARYPNPSHWGKVCFLSTPDGENC 564
>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
Length = 1220
Score = 254 bits (650), Expect = 7e-66
Identities = 121/177 (68%), Positives = 141/177 (79%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E IS YLFP+ + QKA FL YMVKC+L+A+ GRRK DNRDD RNK
Sbjct: 407 ECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLEREL 466
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
RVHI+H ER MVKAMQR+LY DR+++ I++YLDASIITNGLSRAF TG W HP+KRME I
Sbjct: 467 RVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERI 526
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+LR+TNPLQ D+R+TRQQV YTG+VGDARYP+PSHWGKVCFLSTPDGENC
Sbjct: 527 SGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENC 583
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
vinifera]
Length = 1198
Score = 254 bits (650), Expect = 7e-66
Identities = 121/177 (68%), Positives = 141/177 (79%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E IS YLFP+ + QKA FL YMVKC+L+A+ GRRK DNRDD RNK
Sbjct: 371 ECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLEREL 430
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
RVHI+H ER MVKAMQR+LY DR+++ I++YLDASIITNGLSRAF TG W HP+KRME I
Sbjct: 431 RVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERI 490
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+LR+TNPLQ D+R+TRQQV YTG+VGDARYP+PSHWGKVCFLSTPDGENC
Sbjct: 491 SGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENC 547
>ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
gi|508782082|gb|EOY29338.1| DNA-directed RNA polymerase
isoform 3 [Theobroma cacao]
Length = 1073
Score = 251 bits (640), Expect = 1e-64
Identities = 120/177 (67%), Positives = 136/177 (76%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E +STYLFP L S QKA FL YMVKC+L+A+ GR K DNRDD RNK
Sbjct: 356 ECLSTYLFPTLRSFKQKARFLGYMVKCLLQAYTGRLKCDNRDDFRNKRLELAGELLEREL 415
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
+VHI H R M K +QRDLY DR V+ I+HYLDASI+TNGLSRAF TGAW HPYKRME I
Sbjct: 416 KVHIAHARRRMAKTLQRDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERI 475
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+L + NPLQ + DLR+TRQQV YTG+VGDARYP+PSHWGKVCFLSTPDGENC
Sbjct: 476 SGVVANLGRANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENC 532
>ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
gi|508782081|gb|EOY29337.1| DNA-directed RNA polymerase
isoform 2 [Theobroma cacao]
Length = 961
Score = 251 bits (640), Expect = 1e-64
Identities = 120/177 (67%), Positives = 136/177 (76%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E +STYLFP L S QKA FL YMVKC+L+A+ GR K DNRDD RNK
Sbjct: 129 ECLSTYLFPTLRSFKQKARFLGYMVKCLLQAYTGRLKCDNRDDFRNKRLELAGELLEREL 188
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
+VHI H R M K +QRDLY DR V+ I+HYLDASI+TNGLSRAF TGAW HPYKRME I
Sbjct: 189 KVHIAHARRRMAKTLQRDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERI 248
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+L + NPLQ + DLR+TRQQV YTG+VGDARYP+PSHWGKVCFLSTPDGENC
Sbjct: 249 SGVVANLGRANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENC 305
>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 1184
Score = 251 bits (640), Expect = 1e-64
Identities = 120/177 (67%), Positives = 136/177 (76%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E +STYLFP L S QKA FL YMVKC+L+A+ GR K DNRDD RNK
Sbjct: 356 ECLSTYLFPTLRSFKQKARFLGYMVKCLLQAYTGRLKCDNRDDFRNKRLELAGELLEREL 415
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
+VHI H R M K +QRDLY DR V+ I+HYLDASI+TNGLSRAF TGAW HPYKRME I
Sbjct: 416 KVHIAHARRRMAKTLQRDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERI 475
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+L + NPLQ + DLR+TRQQV YTG+VGDARYP+PSHWGKVCFLSTPDGENC
Sbjct: 476 SGVVANLGRANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENC 532
>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Citrus
sinensis] gi|557545145|gb|ESR56123.1| hypothetical
protein CICLE_v10018562mg [Citrus clementina]
Length = 1198
Score = 246 bits (627), Expect = 3e-63
Identities = 115/177 (64%), Positives = 136/177 (76%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E ++TYLFP L QKA FL YMVKC+L+A+ GRRK DNRDD RNK
Sbjct: 366 ECMNTYLFPSLHGTKQKARFLGYMVKCLLQAYSGRRKCDNRDDFRNKRLELAGELLEREL 425
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
+VHI H + M KA+QRDLY DR V+ I++YLDASI+TNGLSRAF TGAW HP+KR E I
Sbjct: 426 KVHIAHARKRMAKALQRDLYGDRTVRPIEYYLDASILTNGLSRAFSTGAWSHPFKRTERI 485
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+G+VA+L + NPLQ + DLRRTRQQV YTG+VGDARYP+PSHWGK+CFLSTPDGENC
Sbjct: 486 SGIVANLGRANPLQTLVDLRRTRQQVQYTGKVGDARYPHPSHWGKICFLSTPDGENC 542
>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
arietinum]
Length = 1199
Score = 245 bits (625), Expect = 5e-63
Identities = 115/177 (64%), Positives = 136/177 (76%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E ++ Y+FP++ +KA +LAYMVK +L A+ GRRK DNRDD RNK
Sbjct: 373 ECLNMYVFPNIKGLNRKARYLAYMVKVLLLAYTGRRKTDNRDDFRNKRLELAGELLEREL 432
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
+VHI H + M KA+QRDLY DR+V I+HYLDASIITNGL RAF TGAW HPYKRME I
Sbjct: 433 KVHIAHARKRMAKALQRDLYGDRDVHQIEHYLDASIITNGLQRAFSTGAWTHPYKRMERI 492
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+L +TNPLQ + +LRRTRQQV YTG+VGDARYP+PSHWGKVCFLSTPDGENC
Sbjct: 493 SGVVATLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENC 549
>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
gi|462422378|gb|EMJ26641.1| hypothetical protein
PRUPE_ppa000410mg [Prunus persica]
Length = 1200
Score = 242 bits (618), Expect = 3e-62
Identities = 114/177 (64%), Positives = 135/177 (76%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
E IS YLFP+L QKA FL YMVK +L+A+ GRRK DNRDD RNK
Sbjct: 375 ECISLYLFPNLKGLKQKARFLGYMVKSLLQAYAGRRKCDNRDDFRNKRLDLAGELLEREL 434
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
+ HI H R M KA+QRDLY DR V+ I+HYLDASI+TNG+SRAF TGAW HP+KRME +
Sbjct: 435 KAHIGHARRRMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFSTGAWCHPFKRMERM 494
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA++ + NPLQ + D+R+TRQQV YTG+VGDARYP+PSHWGKVCFLSTPDGENC
Sbjct: 495 SGVVATVGRANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENC 551
>ref|XP_004157128.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
sativus]
Length = 1031
Score = 241 bits (615), Expect = 8e-62
Identities = 114/177 (64%), Positives = 134/177 (75%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
+ ++ YLF L QK FL YMVKC+L+A+ GRRK DNRDD RNK
Sbjct: 372 DCLNLYLFASLKGSKQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAAELLEREL 431
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
+VHI H R M KA+QRDLY DR+V I+HYLDASIITNGLSRAF TGAW H +KRME I
Sbjct: 432 KVHIAHARRRMEKALQRDLYGDRQVHPIEHYLDASIITNGLSRAFSTGAWAHAFKRMERI 491
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+L + NPLQ + +LRRTRQQV+YTG+VGDARYP+PSHWG+VCFLSTPDGENC
Sbjct: 492 SGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENC 548
>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
sativus]
Length = 1197
Score = 241 bits (615), Expect = 8e-62
Identities = 114/177 (64%), Positives = 134/177 (75%)
Frame = -3
Query: 532 ELISTYLFPHLTSPGQKASFLAYMVKCMLEAFKGRRKVDNRDDMRNKXXXXXXXXXXXXX 353
+ ++ YLF L QK FL YMVKC+L+A+ GRRK DNRDD RNK
Sbjct: 372 DCLNLYLFASLKGSKQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAAELLEREL 431
Query: 352 RVHIKHVERSMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAFYTGAWVHPYKRMEMI 173
+VHI H R M KA+QRDLY DR+V I+HYLDASIITNGLSRAF TGAW H +KRME I
Sbjct: 432 KVHIAHARRRMEKALQRDLYGDRQVHPIEHYLDASIITNGLSRAFSTGAWAHAFKRMERI 491
Query: 172 AGVVASLRQTNPLQAVCDLRRTRQQVSYTGRVGDARYPYPSHWGKVCFLSTPDGENC 2
+GVVA+L + NPLQ + +LRRTRQQV+YTG+VGDARYP+PSHWG+VCFLSTPDGENC
Sbjct: 492 SGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENC 548