BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00021607
         (1145 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]        187   7e-45
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   185   3e-44
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         184   6e-44
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...   184   6e-44
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-...   184   6e-44
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]        184   8e-44
emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group] gi...   183   1e-43
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624...   179   2e-42
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   179   2e-42
ref|XP_004977878.1| PREDICTED: uncharacterized protein LOC101763...   175   4e-41
ref|XP_006491717.1| PREDICTED: uncharacterized protein LOC102620...   171   4e-40
gb|ABA96215.1| retrotransposon protein, putative, Ty3-gypsy subc...   171   4e-40
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]   171   4e-40
ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669...   170   1e-39
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  169   2e-39
gb|ABA91262.1| retrotransposon protein, putative, Ty3-gypsy subc...   169   2e-39
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  168   4e-39
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   167   8e-39
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   165   4e-38
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   164   8e-38

>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
          Length = 1431

 Score =  187 bits (475), Expect = 7e-45
 Identities = 119/366 (32%), Positives = 190/366 (51%), Gaps = 3/366 (0%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+ A+ +F  +A+ WW  +  ++  +  P   +W  +K VMR  F+P +Y R+   +L +
Sbjct: 191  VRAATSEFTDFASVWWI-EHGKKNPNNMP--QTWDALKRVMRARFVPSYYARDLLNRLQQ 247

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG +S+EEY++EL+  +     EET  A +  ++ G+N +I   V+ +D+T++  + H
Sbjct: 248  LRQGAKSVEEYYQELQMGLLRCNLEETEDAAMARFLGGLNREIYDIVDYKDYTNMTRLFH 307

Query: 738  YASIIERQLRDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRRTD 559
             A   ER+++   R++S         TS  +T  T P G++T P      S P++SR   
Sbjct: 308  LACKAEREVQG--RRASAKANFSAGKTSSWQTRTTPPAGRTTSP-----SSTPTTSRAAP 360

Query: 558  YSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQNE 379
                                      GR RDVQCH+CKG+G+ Q  CP++RVL++ +  E
Sbjct: 361  --PPSGDKSAIKAAQPAPSASSMASTGRMRDVQCHRCKGFGHVQRDCPSKRVLVVKNDGE 418

Query: 378  LESASE--DELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNLFQEE 205
              SAS+  D+    + A+ A+    +  EE IG    D      Y SL+  R L+   E+
Sbjct: 419  YSSASDFDDDTLALLAADHADN---EPPEEHIGAAFADH-----YESLIVQRVLSAQMEK 470

Query: 204  -QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLSD 28
             + NQR  +F T C V ++ C MIID GS  N  S   V KL L  + HP PY +QWL++
Sbjct: 471  AEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNN 530

Query: 27   RGEIKV 10
             G+ KV
Sbjct: 531  SGKAKV 536


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  185 bits (470), Expect = 3e-44
 Identities = 118/366 (32%), Positives = 189/366 (51%), Gaps = 3/366 (0%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+ A+ +F  +A+ WW  +  ++  +  P   +W  +K VMR  F+P +Y R+   +L +
Sbjct: 191  VRAATSEFTDFASVWWI-EHGKKNPNNMP--QTWDALKRVMRARFVPSYYARDLLNRLQQ 247

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG +S+EEY++EL+  +     EET  A +  ++ G+N +I   V+ +D+T++  + H
Sbjct: 248  LRQGAKSVEEYYQELQMGLLRCNLEETEDAAMARFLGGLNREIYDIVDYKDYTNMTRLFH 307

Query: 738  YASIIERQLRDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRRTD 559
             A   ER+++   R++S         TS  +T  T P G++  P      S P++SR   
Sbjct: 308  LACKAEREVQG--RRASAKANFSAGKTSSWQTRTTPPAGRTASP-----SSTPTTSRAAP 360

Query: 558  YSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQNE 379
                                      GR RDVQCH+CKG+G+ Q  CP++RVL++ +  E
Sbjct: 361  --PPSSDKSATKAAQPAPSASSMASTGRMRDVQCHRCKGFGHVQRDCPSKRVLVVKNDGE 418

Query: 378  LESASE--DELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNLFQEE 205
              SAS+  D+    + A+ A+    +  EE IG    D      Y SL+  R L+   E+
Sbjct: 419  YSSASDFDDDTLALLAADHADN---EPPEEHIGAAFADH-----YESLIVQRVLSAQMEK 470

Query: 204  -QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLSD 28
             + NQR  +F T C V ++ C MIID GS  N  S   V KL L  + HP PY +QWL++
Sbjct: 471  AEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNN 530

Query: 27   RGEIKV 10
             G+ KV
Sbjct: 531  SGKAKV 536


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  184 bits (467), Expect = 6e-44
 Identities = 116/367 (31%), Positives = 188/367 (51%), Gaps = 4/367 (1%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+ A+ +F  +A+ WW  +  ++  +  P   +W  +K VMR  F+P +Y R+   KL +
Sbjct: 185  VRAATSEFTEFASVWWI-EHGKKNPNNMP--QTWDALKRVMRARFVPSYYARDMLNKLQQ 241

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QGT+S+EEY++EL+  M     EE   + +  ++ G+N +I   +  +D+ ++  + H
Sbjct: 242  LRQGTKSVEEYYQELQMGMLRCNIEEGEESAMARFLGGLNREIQDILAYKDYANVTRLFH 301

Query: 738  YASIIERQL--RDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRR 565
             A   ER++  R    +S+ S    TPW     T+ T   G++  P     + AP  S  
Sbjct: 302  LACKAEREVQGRRASARSNVSAGKSTPWQQRTTTSMT---GRTLAPTPSPSRPAPPPSSS 358

Query: 564  TDYSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQ 385
                                        GR RDV C++CKG+G+ Q  CPN+RVL++ D 
Sbjct: 359  DKPRASSTNSATKSAQKPAGSASSVASTGRTRDVLCYRCKGYGHVQRDCPNQRVLVVKDD 418

Query: 384  NELESASE-DELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNLFQE 208
                SAS+ DE    + A D +   ++  EE IG   +DA+    Y SL+  R L+   E
Sbjct: 419  GGYSSASDLDEATLALLAAD-DAGTKEPPEEQIG--ADDAE---HYESLIVQRVLSAQME 472

Query: 207  E-QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLS 31
            + + NQR  +F T C + +++C +IID GS  N  S   V KL L  + HP PY +QWL+
Sbjct: 473  KAEQNQRHTLFQTKCVIKERSCRLIIDGGSCNNLASSDMVEKLALTTKPHPHPYHIQWLN 532

Query: 30   DRGEIKV 10
            + G++KV
Sbjct: 533  NSGKVKV 539


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score =  184 bits (467), Expect = 6e-44
 Identities = 116/366 (31%), Positives = 189/366 (51%), Gaps = 3/366 (0%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+ A+ +F  +A+ WW  +  ++  +  P   +W  +K VMR  F+P +Y R+   +L +
Sbjct: 549  VRAATSEFTDFASVWWI-EHGKKNPNNMP--QTWDALKRVMRARFVPSYYARDLLNRLQQ 605

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG +S+EEY++EL+  +     EET    +  ++ G+N +I   V+ +D+T++  + H
Sbjct: 606  LRQGAKSVEEYYQELQMGLLRCNLEETEDTAMARFLGGLNREIYDIVDYKDYTNMTRLFH 665

Query: 738  YASIIERQLRDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRRTD 559
             A   ER+++   R++S         TS  +T  T P G++  P      S P++SR   
Sbjct: 666  LACKAEREVQG--RRASAKANFSAGKTSSWQTRTTPPAGRTASP-----SSTPTTSRAAP 718

Query: 558  YSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQNE 379
                                      GR RDVQCH+CKG+G+ Q  CP++RVL++ +  E
Sbjct: 719  --PPSSDKSVTKAAQPAPSASSMVSTGRMRDVQCHRCKGFGHVQRDCPSKRVLVVKNDGE 776

Query: 378  LESASE--DELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNLFQEE 205
              SAS+  D+    + A+ A+    +  EE IG    D      Y SL+  R L+   E+
Sbjct: 777  YSSASDFDDDTLALLAADHADN---EPPEEHIGAAFADH-----YESLIVQRVLSAQMEK 828

Query: 204  -QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLSD 28
             + NQR  +F T C + ++ C MIID GS  N  S   V KL L  + HP PY +QWL++
Sbjct: 829  AEQNQRHTLFQTKCVLKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNN 888

Query: 27   RGEIKV 10
             G++KV
Sbjct: 889  SGKVKV 894


>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108864301|gb|ABA93040.2|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1748

 Score =  184 bits (467), Expect = 6e-44
 Identities = 116/366 (31%), Positives = 189/366 (51%), Gaps = 3/366 (0%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+ A+ +F  +A+ WW  +  ++  +  P   +W  +K VMR  F+P +Y R+   +L +
Sbjct: 558  VRAATSEFTDFASVWWI-EHGKKNPNNMP--QTWDALKRVMRARFVPSYYARDLLNRLQQ 614

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG +S+EEY++EL+  +     EET    +  ++ G+N +I   V+ +D+T++  + H
Sbjct: 615  LRQGAKSVEEYYQELQMGLLRCNLEETEDTAMARFLGGLNREIYDIVDYKDYTNMTRLFH 674

Query: 738  YASIIERQLRDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRRTD 559
             A   ER+++   R++S         TS  +T  T P G++  P      S P++SR   
Sbjct: 675  LACKAEREVQG--RRASAKANFSAGKTSSWQTRTTPPAGRTASP-----SSTPTTSRAAP 727

Query: 558  YSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQNE 379
                                      GR RDVQCH+CKG+G+ Q  CP++RVL++ +  E
Sbjct: 728  --PPSSDKSVTKAAQPAPSASSMVSTGRMRDVQCHRCKGFGHVQRDCPSKRVLVVKNDGE 785

Query: 378  LESASE--DELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNLFQEE 205
              SAS+  D+    + A+ A+    +  EE IG    D      Y SL+  R L+   E+
Sbjct: 786  YSSASDFDDDTLALLAADHADN---EPPEEHIGAAFADH-----YESLIVQRVLSAQMEK 837

Query: 204  -QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLSD 28
             + NQR  +F T C + ++ C MIID GS  N  S   V KL L  + HP PY +QWL++
Sbjct: 838  AEQNQRHTLFQTKCVLKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNN 897

Query: 27   RGEIKV 10
             G++KV
Sbjct: 898  SGKVKV 903


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score =  184 bits (466), Expect = 8e-44
 Identities = 118/366 (32%), Positives = 189/366 (51%), Gaps = 3/366 (0%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+ A+ +F  +A+ WW  +  ++  +  P   +W  +K VMR  F+P +Y R+   +L +
Sbjct: 285  VRAATSEFTDFASVWWI-EHGKKNPNNMP--QTWDALKRVMRARFVPSYYARDLLNRLQQ 341

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG +S+EEY++EL+  +     EET  A +  ++ G+N +I   V+ + +T++  + H
Sbjct: 342  LRQGVKSVEEYYQELQMGLLRCNLEETEDAAMARFLGGLNREIYDIVDYKVYTNMTRLFH 401

Query: 738  YASIIERQLRDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRRTD 559
             A   ER+++   R++S         TS  +T  T P G++T P      S P++SR   
Sbjct: 402  LACKAEREVQG--RRASAKANFSAGKTSSWQTRTTPPAGRTTSP-----SSTPTTSRAAP 454

Query: 558  YSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQNE 379
                                      GR RDVQCH+CKG+G+ Q  CP++RVL++ +  E
Sbjct: 455  --PPSGDKSAIKAAQPAPSASSMASTGRMRDVQCHRCKGFGHVQRDCPSKRVLVVKNDGE 512

Query: 378  LESASE--DELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNLFQEE 205
              SAS+  D+    + A+ A+    +  EE IG    D      Y SL+  R L+   E+
Sbjct: 513  YSSASDFDDDTLALLAADHADN---EPPEEHIGAAFADH-----YESLIVQRVLSAQMEK 564

Query: 204  -QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLSD 28
             + NQR  +F T C V ++ C MIID GS  N  S   V KL L  + HP PY +QWL++
Sbjct: 565  AEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYCIQWLNN 624

Query: 27   RGEIKV 10
             G+ KV
Sbjct: 625  SGKAKV 630


>emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group]
            gi|38345441|emb|CAE03293.2| OSJNBb0046P18.9 [Oryza sativa
            Japonica Group]
          Length = 1134

 Score =  183 bits (464), Expect = 1e-43
 Identities = 117/366 (31%), Positives = 187/366 (51%), Gaps = 3/366 (0%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+ A+ +F  +A+ WW    E  +++      +W  +K VMR  F+P +Y R+   +L +
Sbjct: 374  VRAATSEFTDFASVWWI---EHGKKNPNNMSQTWDALKRVMRARFVPSYYARDLLNRLQQ 430

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG +S+EEY++EL+  +     EET  A +  ++ G+N +I   V+ +D+T++  + H
Sbjct: 431  LRQGAKSVEEYYQELQMGLLHCTLEETEDAAMARFLGGLNREIYDIVDYKDYTNMTRLFH 490

Query: 738  YASIIERQLRDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRRTD 559
             A   ER+++   R++S         TS  +T  T P G++  P      S P++SR   
Sbjct: 491  LACKAEREVQG--RRASAKANFSAGKTSSWQTRTTPPAGRTASP-----SSTPTTSRAAP 543

Query: 558  YSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQNE 379
                                      GR RDVQCH+CKG+G+ Q  CP++RVL++    +
Sbjct: 544  --PLSSDKSVTKAAQPAPSASSMASTGRTRDVQCHRCKGFGHVQRDCPSKRVLVVKKDGK 601

Query: 378  LESASE--DELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNLFQEE 205
              SAS+  D+    + A+ A+    +  EE IG    D      Y SL+  R L+   E+
Sbjct: 602  YSSASDFDDDTLALLAADHADN---EPPEEHIGAAFADH-----YESLIVQRVLSTQMEK 653

Query: 204  -QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLSD 28
             + NQR  +F T C V ++ C MIID GS  N  S   V KL L  + HP PY +QWL++
Sbjct: 654  AEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNN 713

Query: 27   RGEIKV 10
             G+ KV
Sbjct: 714  SGKAKV 719


>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
          Length = 1083

 Score =  179 bits (454), Expect = 2e-42
 Identities = 111/333 (33%), Positives = 165/333 (49%), Gaps = 3/333 (0%)
 Frame = -3

Query: 990 MKDVMRGHFIPVHYEREFEKKLNRIKQGTRSIEEYHKELETAMNWVGKEETLVATINLYI 811
           MK +MR  F+P HY RE  ++L  + QG+RS+E+YHKE+E  M     EE   AT+  ++
Sbjct: 1   MKAIMRRRFVPSHYYRELHQRLQSLTQGSRSVEDYHKEMEIIMIRANIEEEREATMARFL 60

Query: 810 EGVNPDITCEVELRDFTSIEAMIHYASIIERQLRDGCRKSSQST--PAQTPWTSMPRTAP 637
            G+N DI   V L+ +  ++ M+H A  +ERQL+   +K S  T   + + W S      
Sbjct: 61  HGLNQDIANVVYLQHYVELKDMVHMAMKVERQLK---KKGSTRTNLGSSSSWKSKWSKDE 117

Query: 636 TRPQGQSTQPICQFEQSAPSSSRRTDYSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQC 457
                   +PI   ++    S  ++D                           R RD++C
Sbjct: 118 KVVSKPKIEPIKDHKEGGNQSKGKSD-----------------------SQHSRNRDIKC 154

Query: 456 HKCKGWGYFQAQCPNRRVLIITDQNELESASEDELKNPVEAEDAEQSLEQTLEESIGVEV 277
            KC G  +  +QCPN+R +I+ D  ++E+ SE +       EDA   +E +++  +    
Sbjct: 155 FKCLGTCHIASQCPNKRAMILRDDGDVETESESDDDPMPPLEDANDGVEYSIDGKL---- 210

Query: 276 EDAKPNLTYPSLVSIRALNL-FQEEQNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQ 100
                      +V+ RALN   +E+   QR+NIF+T C + DK CSMIID GS  N    
Sbjct: 211 -----------MVARRALNTQVKEDAEVQRDNIFHTRCHIKDKVCSMIIDGGSCTNVAIT 259

Query: 99  YAVGKLNLIPQKHPKPYPLQWLSDRGEIKVGYQ 1
             V KLNL   KH + Y LQWL+D GE+KV  Q
Sbjct: 260 SLVEKLNLKTLKHSRLYKLQWLNDYGEVKVNKQ 292


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  179 bits (454), Expect = 2e-42
 Identities = 116/368 (31%), Positives = 181/368 (49%), Gaps = 4/368 (1%)
 Frame = -3

Query: 1092 LASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNRIK 913
            +ASLK   +A  WW+    RR  D+  PI++W E+K  MR  F+P ++ R+  +KL  +K
Sbjct: 127  IASLK--DFAKLWWKQLSRRRLEDQDEPIETWGELKREMRRKFVPSNFYRDMRRKLQELK 184

Query: 912  QGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIHYA 733
            QG++S+ E++KE+E        +E    TI   +EG N DI  E+  ++F  ++ ++  A
Sbjct: 185  QGSKSVREFYKEMERLKARANIQEDDETTIARILEGFNRDIRRELRNQEFDDVDKLVRVA 244

Query: 732  SIIERQLRDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRRTDYS 553
            S +E +LR   R S  S  +Q  W       P R    S Q   Q E S PS ++    +
Sbjct: 245  SKVEDELRSE-RGSKPSLSSQ--WDQ-----PRRATNNSYQSRTQKEYSRPSHTQEEKKN 296

Query: 552  XXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQNELE 373
                                     +   V C++C+G G++  +CPN + ++ T ++E E
Sbjct: 297  NQREKEKFQEGSKQ-----------KVSTVTCYRCQGRGHYARECPNTKKILTTGKDERE 345

Query: 372  ----SASEDELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNLFQEE 205
                + S+DE   P+     +   E+ ++E      +DA   L +  +V      L   +
Sbjct: 346  YMSANESDDEELEPIGERQKDDHSEEEVQE------DDA---LHFNCVVHKALSTLVVLD 396

Query: 204  QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLSDR 25
            Q  QRENIFY  C +   TCS IID GS  N IS+  V  + +   +HP+PY LQWL+D 
Sbjct: 397  QEEQRENIFYGKCKIPGATCSFIIDGGSCTNVISEDVVNAMKIPTIQHPQPYKLQWLNDD 456

Query: 24   GEIKVGYQ 1
            GE+KV  Q
Sbjct: 457  GELKVHKQ 464


>ref|XP_004977878.1| PREDICTED: uncharacterized protein LOC101763064 [Setaria italica]
          Length = 1131

 Score =  175 bits (443), Expect = 4e-41
 Identities = 115/369 (31%), Positives = 181/369 (49%), Gaps = 6/369 (1%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            ++ A+ +F  +A+ WW ++  R   +  P   +W  MK VMR  F+P ++ R+   KL  
Sbjct: 192  IRAATSEFTDFASIWW-SEYVRSHPNNTP--QTWDAMKRVMRARFVPSYHARDLLHKLQL 248

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG +S+EEY++EL+T M   G  E   A +  ++ G+N +I   +  +++ SI  + H
Sbjct: 249  LRQGNKSVEEYYQELQTGMLRCGLVENEDAAMARFMGGLNREIQDILAYKEYNSITRLFH 308

Query: 738  YASIIERQL--RDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRR 565
             A   ER++  R    +++ S    T WT      P+ P  Q  +       S+      
Sbjct: 309  LACKAEREVQGRRASTRTNISAGRATSWT------PSNPAAQLYRVAAPSSSSSKPRPLT 362

Query: 564  TDYSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQ 385
            T+ S                        GR RD+QC +CKG+G+ +  CP+ RVL++   
Sbjct: 363  TNSSPCPPEPTKGAAAAPTKSSSSIASSGRMRDIQCLRCKGYGHVRKDCPSARVLVVCPN 422

Query: 384  NELESASE-DELKNPVEAED--AEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNLF 214
             E  SAS+ DE    + A +   E       EE IG E  +      Y SLV  R L+  
Sbjct: 423  GEYSSASDLDEETYALLAANNVGEDEEHNKNEEHIGTEHAE-----NYESLVVQRVLSAQ 477

Query: 213  QEE-QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQW 37
             E+ + NQR  +F T C + +++C +IID GS  N  S   V KL L  Q HP+PY +QW
Sbjct: 478  MEKAEQNQRHTLFQTKCVIKERSCRVIIDGGSCNNLASAEMVEKLALCTQPHPQPYYIQW 537

Query: 36   LSDRGEIKV 10
            L+  G++KV
Sbjct: 538  LNSSGKVKV 546


>ref|XP_006491717.1| PREDICTED: uncharacterized protein LOC102620238 [Citrus sinensis]
          Length = 567

 Score =  171 bits (434), Expect = 4e-40
 Identities = 109/346 (31%), Positives = 173/346 (50%), Gaps = 4/346 (1%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+LA+++F  YA  WW+     RRR+   PI++W+EMK +MR  F+P HY RE  ++L  
Sbjct: 140  VKLAAVEFTDYAIIWWDQLVLSRRRNLERPINTWEEMKAIMRRRFVPSHYYRELHQRLQS 199

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            + QG+RS+E+YHKE+E  M     EE   AT+  ++ G+N DI   V+L+ +  +E M+H
Sbjct: 200  LTQGSRSVEDYHKEMEIIMIRANIEEEREATMARFLHGLNQDIANVVDLQHYVELEDMVH 259

Query: 738  YASIIERQLRDGCRKSSQST--PAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRR 565
             A  +ERQL+   +K S  T   + + W S              +PI   ++    S  +
Sbjct: 260  MAMKVERQLK---KKGSTRTNLGSSSSWKSKWSKDEKVVSKPKIEPIKDHKEGGNQSKGK 316

Query: 564  TDYSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQ 385
            +D                           R RD++C KC G G+  +QCPN+RV+I+ D 
Sbjct: 317  SD-----------------------SQHSRNRDIKCFKCLGTGHIASQCPNKRVMILRDN 353

Query: 384  NELESASEDELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNL-FQE 208
             ++E+ SE +       EDA   +E  ++  +               +V+ RALN+  +E
Sbjct: 354  GDVETESESDDDPMPPLEDANDGVEYPVDGKL---------------MVARRALNMQVKE 398

Query: 207  EQNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQY-AVGKLNLI 73
            +   QR+NIF+T C + DK  +  + S S  N +     VG +N I
Sbjct: 399  DAEVQRDNIFHTRCHIKDKILTYWLRSLSNRNLLQLLEEVGWINAI 444


>gb|ABA96215.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 767

 Score =  171 bits (434), Expect = 4e-40
 Identities = 115/378 (30%), Positives = 178/378 (47%), Gaps = 15/378 (3%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+ AS +F  +A+ WW +   R  R R     +W +MK  MR  F+P +Y R+   KL  
Sbjct: 181  VKAASSEFTSFASLWWNDICGRGLRPR-----TWDDMKRTMRSRFVPSYYARDMLNKLQL 235

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG+ S+E Y++E+  A++    +ET  A I+ +  G+N +I   +E +++ ++  + H
Sbjct: 236  LRQGSNSVETYYQEMMIALSRCNLQETEDARISRFYGGLNREIRDILEYKEYNTMNRLFH 295

Query: 738  YASIIERQLRD---------GCRKSSQSTPAQT-----PWTSMPRTAPTRPQGQSTQPIC 601
            +A   ER+++          G   + QSTP Q+     P TSMP  A    +  S Q   
Sbjct: 296  FACKAEREVQGRNKHRSSLAGATSTRQSTPRQSTTVVRPPTSMPSHAQETSKNASVQTPA 355

Query: 600  QFEQSAPSSSRRTDYSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQ 421
            +   S  S+                               GR RD+ CH+C G G+    
Sbjct: 356  KSATSVDST-------------------------------GRTRDITCHRCHGIGHIARD 384

Query: 420  CPNRRVLIITDQNELESASEDELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSL 241
            CPNRR L +    E  SAS+ + +  + A D     +    E + +  E       YPSL
Sbjct: 385  CPNRRALFVNADGEYTSASDCDDEYALAATDHAGGQDDEDIEEVHLHPESLDQ---YPSL 441

Query: 240  VSIRALNLFQE-EQNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQK 64
            +   AL+  ++ E+ NQR N+F +   V   T  MIIDSGS  N  S+  V KL L    
Sbjct: 442  IVKLALSAKEKCEEQNQRHNLFQSKVLVKGHTVKMIIDSGSCNNLASEEMVKKLGLTTHP 501

Query: 63   HPKPYPLQWLSDRGEIKV 10
            HP PY +QW +  G++KV
Sbjct: 502  HPHPYHIQWFNTCGKMKV 519


>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
          Length = 1173

 Score =  171 bits (434), Expect = 4e-40
 Identities = 115/364 (31%), Positives = 173/364 (47%), Gaps = 2/364 (0%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+L  ++F   A  WW+     RRR+    I++W+EMK  MR                  
Sbjct: 99   VKLVVIEFTDCAIIWWDQLVMNRRRNYERLIETWEEMKATMR------------------ 140

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
                 R++++YHKE+E AM     EE    T+  ++ G+N DI   VEL+ +  +E M+H
Sbjct: 141  ----RRNVDDYHKEMEIAMIRANVEEDRETTMARFLNGLNRDIANVVELQHYVELENMVH 196

Query: 738  YASIIERQLRDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRRTD 559
             A  +ERQL+     S Q+  +   W         RP G+  + +  F+       RR +
Sbjct: 197  MAIKVERQLKRKGTLSFQNPGSSASW---------RPNGRKDEGVV-FKSKTKPPKRRDE 246

Query: 558  YSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQNE 379
                                       R  D++C    G G+  +QCPN+R +I     E
Sbjct: 247  APNVNKGKNESQT--------------RNHDIKCFHYLGVGHIASQCPNKRTMIAHVDGE 292

Query: 378  LESASEDELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALN--LFQEE 205
            +E+ SE++       +D   SLE + ++++   VE         SLV+ RAL+  + +++
Sbjct: 293  VETESEED-------DDQMPSLEDSCDDNVEYPVEGE-------SLVARRALSAQVKKDD 338

Query: 204  QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLSDR 25
               QRENIF+T C + +K CSMIID GS  N  S   V KLNL   KHP+PY LQWL+D 
Sbjct: 339  MEQQRENIFHTRCHINNKVCSMIIDGGSCANVASTTLVEKLNLPTLKHPRPYKLQWLNDC 398

Query: 24   GEIK 13
            GE+K
Sbjct: 399  GEVK 402


>ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669237, partial [Glycine
            max]
          Length = 1520

 Score =  170 bits (430), Expect = 1e-39
 Identities = 110/355 (30%), Positives = 174/355 (49%), Gaps = 3/355 (0%)
 Frame = -3

Query: 1056 WWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNRIKQGTRSIEEYHKE 877
            WW +  + RR    PP++ W ++K  +R   IP +YERE   KL R++QG+ S+EEY ++
Sbjct: 572  WWTSLVKERRIHGDPPVEYWNDLKSALRKRHIPSYYERELMDKLQRLRQGSMSVEEYRQQ 631

Query: 876  LETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIHYASIIERQL-RDGC 700
            +E  +   G  E    +I  ++  +N ++  +VEL  +  ++ ++     +E+QL R   
Sbjct: 632  MELLLLRAGLREEERTSIARFLSWLNMEVRDKVELLPYRDLDELVQLCIKVEQQLKRKPS 691

Query: 699  RKS--SQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRRTDYSXXXXXXXXX 526
             KS  S S P +     +   AP++P+    + I   E+  P +S +             
Sbjct: 692  SKSYGSHSYPRKDQAHGILGAAPSKPKEDKGKTI---EKYTPKTSSQE------------ 736

Query: 525  XXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQNELESASEDELKN 346
                            R   ++C KC G G+  +QCP ++ +I+  Q+   S  E     
Sbjct: 737  ----------------RTSKIKCFKCLGRGHIASQCPTKKTMIMRGQDIYSSQEETTSCP 780

Query: 345  PVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNLFQEEQNNQRENIFYTHC 166
                 + E   E++ EE    E  D    L    L+  ++ +L Q    +QRENIF+T C
Sbjct: 781  SSSGSEDEVRGEESSEEVYPHEEGDL---LMVRRLLGGQSCDLSQ----SQRENIFHTRC 833

Query: 165  SVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLSDRGEIKVGYQ 1
             +LDKTCS+I+DSGS  N  S   V KLNL    HPKPY LQWL+++GE+ V  Q
Sbjct: 834  KILDKTCSLIVDSGSCCNCCSTRLVSKLNLTIIPHPKPYKLQWLNEQGEMIVNQQ 888


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  169 bits (429), Expect = 2e-39
 Identities = 110/367 (29%), Positives = 186/367 (50%), Gaps = 4/367 (1%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V  A   F  +A  WW ++  R      P   +W  +K  MR  ++P +Y+R+  + L R
Sbjct: 226  VAAAVCSFTSFACXWW-SEYCRIHHANIPA--TWAALKTAMRTRWVPPYYQRDLLQNLQR 282

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG +S+EEY++EL+T M   G  E   A +  ++ G+N DI   +E +D+ +I  + H
Sbjct: 283  LRQGKKSVEEYYQELQTGMIRCGIVEDNEAMLARFMGGLNRDIQTILEYKDYXTITRLFH 342

Query: 738  YASIIERQLRD--GCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRR 565
             A   ER+++D     +++ S    + WT    +  TRP   S  P+     SA SS+R 
Sbjct: 343  LACKAEREVQDRQALARTNFSAGRTSSWTPRTTSTSTRPPA-SAPPV-----SAASSTRD 396

Query: 564  T-DYSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITD 388
            T   +                        G+  +V C +CKG G++  +CP++RV+IIT+
Sbjct: 397  TRKQAPAPSFAKSTPSGPAQSSSSSTASTGQTHEVICRRCKGGGHYARECPSKRVMIITE 456

Query: 387  QNELESASEDELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNL-FQ 211
                +SAS+ + +        E+ +  T +E+  +  + A     Y SLV+ R L++   
Sbjct: 457  DGGYDSASDYDEETLALIASEERGVADTAQETQYMAADYAD---RYESLVAQRVLSVQVT 513

Query: 210  EEQNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLS 31
            + + NQR N+F+T   V +++  +IID GS  N  S   V KL+L  + HP PY +QW +
Sbjct: 514  QVEQNQRHNLFHTKGVVKERSVRVIIDGGSCNNLASMEMVEKLSLTTRPHPHPYYIQWFN 573

Query: 30   DRGEIKV 10
            + G++KV
Sbjct: 574  NSGKVKV 580


>gb|ABA91262.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 767

 Score =  169 bits (428), Expect = 2e-39
 Identities = 113/374 (30%), Positives = 176/374 (47%), Gaps = 11/374 (2%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+ AS +F  +A+ WW +   R  R R     +W +MK  MR  F+P +Y R+   KL  
Sbjct: 181  VKAASSEFTSFASLWWNDICGRGLRPR-----TWDDMKRTMRSRFVPSYYARDMLNKLQL 235

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG+ S+E Y++E+  A++    +ET  A I+ +  G+N +I   +E +++ ++  + H
Sbjct: 236  LRQGSNSVETYYQEMMIALSRCNLQETEDARISRFYGGLNREIRDILEYKEYNTMNRLFH 295

Query: 738  YASIIERQLRD---------GCRKSSQSTPAQTPWTSMPRTA-PTRPQGQSTQPICQFEQ 589
            +A   ER+++          G   + QSTP Q+     P T+ P+  Q  S     Q   
Sbjct: 296  FACKAEREVQGRNKHRSSLAGATSTRQSTPRQSTTVVRPPTSTPSHAQETSKNASVQTPA 355

Query: 588  SAPSSSRRTDYSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNR 409
             + +S   T                           GR RD+ CH+C G G+    CPNR
Sbjct: 356  KSATSVDST---------------------------GRTRDITCHRCHGIGHIARDCPNR 388

Query: 408  RVLIITDQNELESASEDELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIR 229
            R L +    E  SAS+ + +  + A D     +    E + +  E       YPSL+   
Sbjct: 389  RALFVNADGEYTSASDCDDEYALAATDHAGGQDDEDIEEVHLHPESLDQ---YPSLIVKL 445

Query: 228  ALNLFQE-EQNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKP 52
            AL+  ++ E+ NQR N+F +   V   T  MIIDSGS  N  S+  V KL L    HP P
Sbjct: 446  ALSAKEKCEEQNQRHNLFQSKVLVKGHTVKMIIDSGSCNNLASEEMVKKLGLTTHPHPHP 505

Query: 51   YPLQWLSDRGEIKV 10
            Y +QW    G++KV
Sbjct: 506  YHIQWFHTCGKMKV 519


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  168 bits (425), Expect = 4e-39
 Identities = 109/367 (29%), Positives = 186/367 (50%), Gaps = 4/367 (1%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V  A   F  +A  WW ++  R      P   +W  +K  MR  ++P +Y+R+  + L R
Sbjct: 223  VAAAVCSFTSFACIWW-SEYCRIHHANIPA--TWAALKTAMRTRWVPPYYQRDLLQNLQR 279

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG +S+EEY++EL+T M   G  E   A +  ++ G+N DI   +E +D+ +I  + H
Sbjct: 280  LRQGKKSVEEYYQELQTGMIRCGIVEDNEAMLARFMGGLNRDIQTILEYKDYNTITRLFH 339

Query: 738  YASIIERQLRD--GCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRR 565
             A   ER+++D     +++ S    + WT    +  TRP   S  P+     SA +S+R 
Sbjct: 340  LACKAEREVQDRQALARTNFSAGRTSSWTPRTTSTSTRPPA-SAPPV-----SAANSTRD 393

Query: 564  T-DYSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITD 388
            T   +                        G+  +V C +CKG G++  +CP++RV+IIT+
Sbjct: 394  TRKQAPAPSFAKSTPSGPAQSSSSSTASTGQTHEVICRRCKGGGHYARECPSKRVMIITE 453

Query: 387  QNELESASEDELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNL-FQ 211
                +SAS+ + +        E+ +  T +E+  +  + A     Y SLV+ R L++   
Sbjct: 454  DGGYDSASDYDEETLALIASEERGVXDTAQETQYMAADYAD---RYESLVAQRVLSVQVT 510

Query: 210  EEQNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLS 31
            + + NQR N+F+T   V +++  +IID GS  N  S   V KL+L  + HP PY +QW +
Sbjct: 511  QVEQNQRHNLFHTKGVVKERSVRVIIDGGSCNNLASMEMVEKLSLTTRPHPHPYYIQWFN 570

Query: 30   DRGEIKV 10
            + G++KV
Sbjct: 571  NSGKVKV 577


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  167 bits (423), Expect = 8e-39
 Identities = 107/365 (29%), Positives = 181/365 (49%), Gaps = 2/365 (0%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V  A   F  +A  WW           YP   +W  +K  MR  ++P +Y+ E  +KL R
Sbjct: 213  VPAAVCAFTSFACVWWSEHCRL-----YPIPATWAALKTAMRTRWVPPYYQHELLQKLQR 267

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG  S+EEY++EL+T M   G  E   A +  ++ G+N +I   +E +D+T+I  + H
Sbjct: 268  LRQGKNSVEEYYQELQTGMIRCGIVEENEAMLARFMGGLNREIQTILEYKDYTNITRLFH 327

Query: 738  YASIIERQLRDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRRT- 562
             A   ER+++D    +  +  A  P +  PR + T  +  +  P      SA +S+R T 
Sbjct: 328  LACKAEREVQDRQALARTNFSAGRPSSWTPRASSTSTRSATPAP-----PSAATSNRDTI 382

Query: 561  DYSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQN 382
              +                        G+  D+ C +CKG G++  +CP++RV+I+++  
Sbjct: 383  KQAQSPLSAKSTPSGPAKSSSSSMASTGQTHDIICRRCKGGGHYARECPSKRVMIVSEDG 442

Query: 381  ELESASEDELKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNL-FQEE 205
              ESAS+ + +        +   + +  E+  +  EDA     Y  LV+ R L++   + 
Sbjct: 443  GYESASDYDEETLALITRDKHGGDDSDHETQYMAPEDAD---RYECLVAQRVLSVQVTQA 499

Query: 204  QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQWLSDR 25
            + NQR N+F+T   V +++  +IID GS  N  S   V KL+LI + HP PY +QW ++ 
Sbjct: 500  EQNQRHNLFHTKGVVKERSVRVIIDGGSCNNLASMEMVEKLSLITRPHPHPYYIQWFNNS 559

Query: 24   GEIKV 10
            G++KV
Sbjct: 560  GKVKV 564


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  165 bits (417), Expect = 4e-38
 Identities = 113/374 (30%), Positives = 182/374 (48%), Gaps = 11/374 (2%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+ A+ +F  +A+ WW ++  R   +  P   +W  MK VMR  F+P ++ R+   KL +
Sbjct: 193  VRAATSEFTDFASIWW-SEFVRSNPNNTP--QTWDAMKRVMRARFVPSYHARDLLHKLQQ 249

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG +S+EEY++ L+T M   G  E   A +  ++ G+N +I   +  +++ SI  + H
Sbjct: 250  LRQGNKSVEEYYQALQTGMLRCGLVENDDAGMARFMGGLNREIQDILTYKEYNSINHLFH 309

Query: 738  YASIIERQL--RDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRR 565
             A   ER++  R    +++ S    + WTS    AP+    ++  P     +  PS+   
Sbjct: 310  LACKAEREVQGRRASFRTNISAGRASSWTSSNAAAPST---RAAAPSSSSNKLRPST--- 363

Query: 564  TDYSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQ 385
            T+ +                        GR RD+QC +CKG+G+ +  CP+ RV+I+   
Sbjct: 364  TNSTPCPSEPTRGVAATPSKTSSSVASSGRTRDIQCLRCKGYGHVRKDCPSTRVMIVRAD 423

Query: 384  NELESASEDE--------LKNPVEAEDAEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIR 229
                SAS+ +          N  E +   Q      EE IG E  +      Y SLV  R
Sbjct: 424  GGYSSASDLDGETYALLATNNAREGDAPHQD-----EEHIGAEAAE-----HYESLVVQR 473

Query: 228  ALNLFQEE-QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKP 52
             L+   E  + NQR  +F T C + +++C +IID GS  N  S   V KL L  Q HP+P
Sbjct: 474  VLSAQMERAEQNQRHTLFQTKCVIKERSCRVIIDGGSCNNLASAEMVEKLALSTQPHPQP 533

Query: 51   YPLQWLSDRGEIKV 10
            Y +QWL+  G++KV
Sbjct: 534  YYIQWLNSSGKVKV 547


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  164 bits (414), Expect = 8e-38
 Identities = 113/369 (30%), Positives = 183/369 (49%), Gaps = 6/369 (1%)
 Frame = -3

Query: 1098 VQLASLKFRGYAAPWWENQQERRRRDRYPPIDSWQEMKDVMRGHFIPVHYEREFEKKLNR 919
            V+ A+ +F  +A+ WW ++  R   +  P   +W  MK VMR  F+P ++ R+   KL +
Sbjct: 193  VRAATSEFTDFASIWW-SEFVRSNPNNTP--QTWDAMKRVMRARFVPSYHARDLLHKLQQ 249

Query: 918  IKQGTRSIEEYHKELETAMNWVGKEETLVATINLYIEGVNPDITCEVELRDFTSIEAMIH 739
            ++QG +S+EEY++ L+T M   G  E   A +  ++ G+N +I   +  +++ SI  + H
Sbjct: 250  LRQGNKSVEEYYQALQTGMLRCGLVENDDAGMARFMGGLNREIQDILAYKEYNSINRLFH 309

Query: 738  YASIIERQL--RDGCRKSSQSTPAQTPWTSMPRTAPTRPQGQSTQPICQFEQSAPSSSRR 565
             A   ER++  R    +++ S    + WTS    AP+    ++  P     +  PS+   
Sbjct: 310  LACKAEREVQGRRASFRTNISAGRASSWTSSNVAAPST---RAAAPSSSNNKLRPST--- 363

Query: 564  TDYSXXXXXXXXXXXXXXXXXXXXXXXPGRARDVQCHKCKGWGYFQAQCPNRRVLIITDQ 385
            T+ +                        GR RD+QC +CKG+G+ +  CP+ RV+I+   
Sbjct: 364  TNSTPCPSEPTRGVAATPSKSSSSVASSGRTRDIQCLRCKGYGHVRKDCPSTRVMIVRAD 423

Query: 384  NELESASE-DELKNPVEAED--AEQSLEQTLEESIGVEVEDAKPNLTYPSLVSIRALNLF 214
                SAS+ DE    + A +   +       EE IG E  +      Y SLV  R L+  
Sbjct: 424  GGYSSASDLDEETYALLATNNAGKGDAPHQDEEHIGAEAAE-----HYESLVVQRVLSAQ 478

Query: 213  QEE-QNNQRENIFYTHCSVLDKTCSMIIDSGSVVNAISQYAVGKLNLIPQKHPKPYPLQW 37
             E  + NQR  +F T C + +++C +IID GS  N  S   V KL L  Q HP+PY +QW
Sbjct: 479  MERAEQNQRHTLFQTKCVIKERSCRVIIDRGSCNNLASAEMVEKLALSTQPHPQPYYIQW 538

Query: 36   LSDRGEIKV 10
            L+  G++KV
Sbjct: 539  LNSSGKVKV 547