BLASTX nr result
ID: Mentha29_contig00018253
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00018253
(760 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus... 433 e-119
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 408 e-112
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise... 408 e-112
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 392 e-107
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 392 e-107
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 390 e-106
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 390 e-106
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put... 389 e-106
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 389 e-106
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun... 386 e-105
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin... 380 e-103
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 373 e-101
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 373 e-101
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas... 369 e-100
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 368 1e-99
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 367 2e-99
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 366 4e-99
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 363 5e-98
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 363 5e-98
ref|XP_002299208.2| DNA-directed RNA polymerase alpha subunit fa... 361 2e-97
>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
Length = 2113
Score = 433 bits (1114), Expect = e-119
Identities = 217/250 (86%), Positives = 227/250 (90%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
+K+ QDTRKKLS+KGYFPQDGYILQHLPVPPNCLSVPD+SDGISTMSTDYSI+LLKKVLR
Sbjct: 186 RKLPQDTRKKLSAKGYFPQDGYILQHLPVPPNCLSVPDVSDGISTMSTDYSISLLKKVLR 245
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASST 368
QVEIIKNSRSGMPNFESQEIEAN+LQAAVA YL+FRGTGK + SST
Sbjct: 246 QVEIIKNSRSGMPNFESQEIEANELQAAVALYLQFRGTGKASRDVDSRFGVNKEINVSST 305
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHN+ FLQ
Sbjct: 306 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNILFLQ 365
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
KLVDEKLCLTYRDG S YSLREGSKGHT LRPGQVVHRRIMDGD VFINRPPTTHKHSLQ
Sbjct: 366 KLVDEKLCLTYRDGLSQYSLREGSKGHTSLRPGQVVHRRIMDGDTVFINRPPTTHKHSLQ 425
Query: 729 ALSVYIHDDH 758
ALSVY+HDDH
Sbjct: 426 ALSVYVHDDH 435
>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
subunit 1 [Solanum lycopersicum]
Length = 1632
Score = 408 bits (1048), Expect(2) = e-112
Identities = 198/250 (79%), Positives = 224/250 (89%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
++I +DTRKKLS+KGYFPQ+GYILQ+LPVPPNCLSVPDISDG + MS+D+SIT+L+KVLR
Sbjct: 186 RRIREDTRKKLSAKGYFPQEGYILQYLPVPPNCLSVPDISDGNNIMSSDHSITMLRKVLR 245
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASST 368
Q++IIK+SRSG PNFE+ E+EANDLQAAV QYL+FRGTGK + ++T
Sbjct: 246 QIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQFRGTGKASRDVDKRFGIHKEAADTTT 305
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKMKTLFIRKGSGFSSRSVITGDP+KGV EIGLP EIAQKITFEERV+QHNMA+LQ
Sbjct: 306 KAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGLPCEIAQKITFEERVSQHNMAYLQ 365
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
KLVDEKLCLTY+DG STYSLREGSKGHTFLRPGQ+VHRRIMDGD VFINRPPTTHKHSLQ
Sbjct: 366 KLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDTVFINRPPTTHKHSLQ 425
Query: 729 ALSVYIHDDH 758
ALSVY+HDDH
Sbjct: 426 ALSVYVHDDH 435
Score = 25.0 bits (53), Expect(2) = e-112
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 8 SRPLLASEVVAILKK 52
SRPLL SEV+AIL++
Sbjct: 173 SRPLLPSEVLAILRR 187
>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
Length = 1379
Score = 408 bits (1049), Expect = e-112
Identities = 199/250 (79%), Positives = 222/250 (88%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
KK+ ++T+K L S+GYFPQ+GY+L+ LPVPPNCL VPDISDG+STMS DYSITLLKKVLR
Sbjct: 186 KKLPKETKKSLLSRGYFPQEGYVLRFLPVPPNCLCVPDISDGVSTMSKDYSITLLKKVLR 245
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASST 368
QVE+IKNSRSGMPNFES EIEAN+LQA+V+QYL+FRGTGK ++SST
Sbjct: 246 QVEVIKNSRSGMPNFESHEIEANELQASVSQYLQFRGTGKAARDVDSRFGVHKEINSSST 305
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKMKTLFIRKGSGFSSRSV+TGD FKGVSEIGLP+EIAQKITFEERVN HN+ FLQ
Sbjct: 306 KAWLEKMKTLFIRKGSGFSSRSVVTGDAFKGVSEIGLPYEIAQKITFEERVNVHNIDFLQ 365
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
KLVDEKLCLTYRDG STYSLREGSKGHTFL+PGQ+VHRRIMDGD+ FINRPPTTHKHSLQ
Sbjct: 366 KLVDEKLCLTYRDGSSTYSLREGSKGHTFLKPGQIVHRRIMDGDLAFINRPPTTHKHSLQ 425
Query: 729 ALSVYIHDDH 758
ALSVY+HD H
Sbjct: 426 ALSVYVHDGH 435
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 392 bits (1007), Expect = e-107
Identities = 193/250 (77%), Positives = 216/250 (86%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
++I +DTRKKL KGYFPQDGYILQ+LPVPPNCLSVPDISDG+S MS+D S+++LKKVL+
Sbjct: 245 RRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSMLKKVLK 304
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVESA-------------SST 368
Q+E+IK SRSG PNFES +IEAN+LQ+++ QYLE RGT K + SST
Sbjct: 305 QIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDTRFGSSKEPNESST 364
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIGLPFEIAQ+ITFEERVN HNM LQ
Sbjct: 365 KAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNVHNMKHLQ 424
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
LVDEKLCLTYRDG STYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ
Sbjct: 425 NLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 484
Query: 729 ALSVYIHDDH 758
ALSVY+HDDH
Sbjct: 485 ALSVYVHDDH 494
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 392 bits (1007), Expect = e-107
Identities = 193/250 (77%), Positives = 216/250 (86%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
++I +DTRKKL KGYFPQDGYILQ+LPVPPNCLSVPDISDG+S MS+D S+++LKKVL+
Sbjct: 185 RRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSMLKKVLK 244
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVESA-------------SST 368
Q+E+IK SRSG PNFES +IEAN+LQ+++ QYLE RGT K + SST
Sbjct: 245 QIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDTRFGSSKEPNESST 304
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIGLPFEIAQ+ITFEERVN HNM LQ
Sbjct: 305 KAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNVHNMKHLQ 364
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
LVDEKLCLTYRDG STYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ
Sbjct: 365 NLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 424
Query: 729 ALSVYIHDDH 758
ALSVY+HDDH
Sbjct: 425 ALSVYVHDDH 434
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 390 bits (1001), Expect = e-106
Identities = 191/249 (76%), Positives = 217/249 (87%), Gaps = 12/249 (4%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
K+I ++TRKKL+ KGYFPQDGYIL++LPVPPNCLSVPDISDG+STMS+D SI +LKKVL+
Sbjct: 188 KRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSIAMLKKVLK 247
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKV------------ESASSTK 371
QVEII++SRSG PNFESQE+E+NDLQ AV QYLE RGT K + S+TK
Sbjct: 248 QVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGVSQDPNSTTK 307
Query: 372 AWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQK 551
AWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+PFEIAQ+ITFEERVN HN+ +LQ+
Sbjct: 308 AWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVNVHNINYLQE 367
Query: 552 LVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQA 731
LVD KLCLTY DG S+YSLREGSKGHTFLRPGQVVHRRIMDGD VFINRPPTTHKHSLQA
Sbjct: 368 LVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPPTTHKHSLQA 427
Query: 732 LSVYIHDDH 758
LSVY+HDDH
Sbjct: 428 LSVYVHDDH 436
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 390 bits (1001), Expect = e-106
Identities = 191/249 (76%), Positives = 217/249 (87%), Gaps = 12/249 (4%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
K+I ++TRKKL+ KGYFPQDGYIL++LPVPPNCLSVPDISDG+STMS+D SI +LKKVL+
Sbjct: 188 KRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSIAMLKKVLK 247
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKV------------ESASSTK 371
QVEII++SRSG PNFESQE+E+NDLQ AV QYLE RGT K + S+TK
Sbjct: 248 QVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGVSQDPNSTTK 307
Query: 372 AWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQK 551
AWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+PFEIAQ+ITFEERVN HN+ +LQ+
Sbjct: 308 AWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVNVHNINYLQE 367
Query: 552 LVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQA 731
LVD KLCLTY DG S+YSLREGSKGHTFLRPGQVVHRRIMDGD VFINRPPTTHKHSLQA
Sbjct: 368 LVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPPTTHKHSLQA 427
Query: 732 LSVYIHDDH 758
LSVY+HDDH
Sbjct: 428 LSVYVHDDH 436
>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
[Theobroma cacao] gi|508727914|gb|EOY19811.1|
DNA-directed RNA polymerase E subunit 1, putative
isoform 3 [Theobroma cacao]
Length = 1675
Score = 389 bits (999), Expect = e-106
Identities = 192/250 (76%), Positives = 214/250 (85%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
K+I +TR+KLS KG+FPQ+GYIL++LPVPPNCLSVPDISDG+S MS+D S +LKKVL+
Sbjct: 186 KRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTAMLKKVLK 245
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASST 368
QVEIIK+SRSG PNFES E+EANDLQ+AV QYL+ RGT K S SST
Sbjct: 246 QVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISKDASDSST 305
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSR VITGDP+K V+EIG+P EIAQ+ITFEERVN HNM +LQ
Sbjct: 306 KAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNMHNMRYLQ 365
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
LVD KLCLTYRDG STYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ
Sbjct: 366 NLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 425
Query: 729 ALSVYIHDDH 758
ALSVY+HDDH
Sbjct: 426 ALSVYVHDDH 435
>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|590569189|ref|XP_007011000.1|
DNA-directed RNA polymerase E subunit 1, putative
isoform 1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
DNA-directed RNA polymerase E subunit 1, putative
isoform 1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative
isoform 1 [Theobroma cacao]
Length = 1788
Score = 389 bits (999), Expect = e-106
Identities = 192/250 (76%), Positives = 214/250 (85%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
K+I +TR+KLS KG+FPQ+GYIL++LPVPPNCLSVPDISDG+S MS+D S +LKKVL+
Sbjct: 186 KRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTAMLKKVLK 245
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASST 368
QVEIIK+SRSG PNFES E+EANDLQ+AV QYL+ RGT K S SST
Sbjct: 246 QVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISKDASDSST 305
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSR VITGDP+K V+EIG+P EIAQ+ITFEERVN HNM +LQ
Sbjct: 306 KAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNMHNMRYLQ 365
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
LVD KLCLTYRDG STYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ
Sbjct: 366 NLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 425
Query: 729 ALSVYIHDDH 758
ALSVY+HDDH
Sbjct: 426 ALSVYVHDDH 435
>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
gi|462415343|gb|EMJ20080.1| hypothetical protein
PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 386 bits (991), Expect = e-105
Identities = 185/250 (74%), Positives = 218/250 (87%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
K+I Q+TRKKL++KGYFPQDGYIL +PVPPNCLSVP+ISDG+S MS D SI++LKKVL+
Sbjct: 188 KRIPQETRKKLAAKGYFPQDGYILSQIPVPPNCLSVPEISDGVSVMSADPSISMLKKVLK 247
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASST 368
QVEII++SRSG+PNFESQ +EAN+LQA + QYL+ RGTGK +ASST
Sbjct: 248 QVEIIRSSRSGIPNFESQIVEANELQAIIDQYLQVRGTGKPSRDIDARFGVNKELNASST 307
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSRSVITGD F+ V+E+G+P+EIAQ+ITFEE+VN HN+ +LQ
Sbjct: 308 KAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRITFEEKVNDHNIRYLQ 367
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
+LVD KLCLTY+DG STYSLREGSKGHTFLRPGQVVHRRIMDGD+VF+NRPPTTHKHSLQ
Sbjct: 368 ELVDSKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDLVFVNRPPTTHKHSLQ 427
Query: 729 ALSVYIHDDH 758
AL VY+HDDH
Sbjct: 428 ALQVYVHDDH 437
>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 991
Score = 380 bits (977), Expect = e-103
Identities = 188/250 (75%), Positives = 215/250 (86%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
++I QDTRKKL+ KGYFPQDGYI++++PVPPNCLSVPDISDG+S MS+D SI++LKKVL+
Sbjct: 187 RRIPQDTRKKLAKKGYFPQDGYIMRYVPVPPNCLSVPDISDGVSVMSSDLSISMLKKVLK 246
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKV-------------ESASST 368
QVEIIK+SRSG PNFES E+EA DLQ+AV QYL+ RGT K + SST
Sbjct: 247 QVEIIKSSRSGEPNFESHEVEAVDLQSAVDQYLQVRGTAKSARDVGERFGVHKESNDSST 306
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+P EIAQ+ITFEERVN HNM +LQ
Sbjct: 307 KAWLEKMRTLFIRKGSGFSSRSVITGDAYKCVNEIGIPSEIAQRITFEERVNAHNMQYLQ 366
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
+LVD KLCLTYRDG STYSLREGSKGHTFLR GQ+VHRRIMDGD+VFINRPPTTHKHSLQ
Sbjct: 367 ELVDNKLCLTYRDGSSTYSLREGSKGHTFLRLGQIVHRRIMDGDMVFINRPPTTHKHSLQ 426
Query: 729 ALSVYIHDDH 758
ALSVY+HD H
Sbjct: 427 ALSVYVHDGH 436
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 373 bits (957), Expect = e-101
Identities = 180/250 (72%), Positives = 212/250 (84%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
KKI +TRKKL+ +GY+PQDGYILQ+LPVPPNCLSVP+ISDG++ MS+D ++++LKK+L+
Sbjct: 185 KKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILK 244
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVESA-------------SST 368
QVEIIK SRSG PNFES E+EANDLQ AV QYL+ RGT K ST
Sbjct: 245 QVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPST 304
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+PFE+AQ+ITFEERV+ HN+ +LQ
Sbjct: 305 KAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQ 364
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
+LVD+KLCLTYRDG S YSLREGS GHT+L+PGQ+VHRRIMDGDIVFINRPPTTHKHSLQ
Sbjct: 365 ELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQ 424
Query: 729 ALSVYIHDDH 758
AL VY+HDDH
Sbjct: 425 ALRVYLHDDH 434
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
subunit 1-like [Cucumis sativus]
Length = 2019
Score = 373 bits (957), Expect = e-101
Identities = 180/250 (72%), Positives = 212/250 (84%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
KKI +TRKKL+ +GY+PQDGYILQ+LPVPPNCLSVP+ISDG++ MS+D ++++LKK+L+
Sbjct: 215 KKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILK 274
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVESA-------------SST 368
QVEIIK SRSG PNFES E+EANDLQ AV QYL+ RGT K ST
Sbjct: 275 QVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPST 334
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+PFE+AQ+ITFEERV+ HN+ +LQ
Sbjct: 335 KAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQ 394
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
+LVD+KLCLTYRDG S YSLREGS GHT+L+PGQ+VHRRIMDGDIVFINRPPTTHKHSLQ
Sbjct: 395 ELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQ 454
Query: 729 ALSVYIHDDH 758
AL VY+HDDH
Sbjct: 455 ALRVYLHDDH 464
>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
gi|561006762|gb|ESW05756.1| hypothetical protein
PHAVU_011G206900g [Phaseolus vulgaris]
Length = 2052
Score = 369 bits (948), Expect = e-100
Identities = 176/250 (70%), Positives = 213/250 (85%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
K+I +T+KKL+ KGYFPQDGY+ +HLPVPPNCLSVP++SDGIS MS+D S+T+L+K+LR
Sbjct: 189 KRIPIETKKKLAGKGYFPQDGYVFKHLPVPPNCLSVPEVSDGISVMSSDPSMTILRKLLR 248
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASST 368
+VEIIK+SRSG PNFES +EANDLQ+ V QY + RGT K +ASST
Sbjct: 249 KVEIIKSSRSGEPNFESHHVEANDLQSVVEQYFQIRGTSKAARDTETRFGVNKELNASST 308
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSR+VITGD +K ++E+G+P E+AQ+ITFEERVN HN+++LQ
Sbjct: 309 KAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNISYLQ 368
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
KLVDE LCLTY++G ST+SLREGSKGH +L+PGQ+VHRRIMDGDIVFINRPPTTHKHSLQ
Sbjct: 369 KLVDENLCLTYKEGVSTFSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQ 428
Query: 729 ALSVYIHDDH 758
AL VYIHDDH
Sbjct: 429 ALFVYIHDDH 438
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 368 bits (944), Expect = 1e-99
Identities = 180/250 (72%), Positives = 210/250 (84%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
K+I +TRKKLS KGYFPQDGYILQ LPVPPNCLSVP +SDGI+ MS+D SI++LKKVL+
Sbjct: 191 KRIPAETRKKLSGKGYFPQDGYILQQLPVPPNCLSVPVVSDGITVMSSDLSISMLKKVLK 250
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASST 368
Q E+I++SRSG PNF++ + EA LQ+ V QYL+ RGT K S S+T
Sbjct: 251 QAEVIRSSRSGAPNFDAHKDEATSLQSMVDQYLQVRGTTKTSRDVDTRYGVKKESSESTT 310
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSRSVITGD + V+++G+P+EIAQ+ITFEERV+ HNM +LQ
Sbjct: 311 KAWLEKMRTLFIRKGSGFSSRSVITGDAYTLVNQVGIPYEIAQRITFEERVSVHNMRYLQ 370
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
+LVD KLCLTY+DG STYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ
Sbjct: 371 ELVDNKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 430
Query: 729 ALSVYIHDDH 758
ALSVY+HDDH
Sbjct: 431 ALSVYVHDDH 440
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
max]
Length = 2082
Score = 367 bits (942), Expect = 2e-99
Identities = 176/250 (70%), Positives = 213/250 (85%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
K+I +T+KKL+ KGYFPQDGY+L++LPVPPNCLSVP++SDG+S MS+D SIT+L+K+LR
Sbjct: 189 KRIPIETKKKLAGKGYFPQDGYVLKYLPVPPNCLSVPEVSDGVSVMSSDPSITILRKLLR 248
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASST 368
+VEIIK+SRSG PNFES +EANDLQ+ V QY + RGT K +ASST
Sbjct: 249 KVEIIKSSRSGEPNFESHHVEANDLQSVVDQYFQIRGTSKPARDIETHFGVNKELTASST 308
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSR+VITGD +K ++E+G+P E+AQ+ITFEERVN HN+ +LQ
Sbjct: 309 KAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNIRYLQ 368
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
KLVDE LCLTY++G STYSLREGSKGH +L+PGQ+VHRRIMDGDIVFINRPPTTHKHSLQ
Sbjct: 369 KLVDEHLCLTYKEGGSTYSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQ 428
Query: 729 ALSVYIHDDH 758
AL VYIH+DH
Sbjct: 429 ALYVYIHEDH 438
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 366 bits (940), Expect = 4e-99
Identities = 173/250 (69%), Positives = 214/250 (85%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
K++ Q+T+KKL+ KGYFPQDGYIL++LPVPPNCLSVP +SDG+S MS+D ++T+L+K+LR
Sbjct: 271 KRLPQETKKKLAGKGYFPQDGYILKYLPVPPNCLSVPVVSDGVSIMSSDPALTILRKLLR 330
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASST 368
+VE+I++SRSG PNFES ++EANDLQ+ V QYL+ RGT K + SST
Sbjct: 331 KVEVIRSSRSGEPNFESHQVEANDLQSVVDQYLQIRGTSKAARDIETHYGVNKELNDSST 390
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSR+VITGD +K ++E+G+P E+AQ+ITFEERV+ HN+ +LQ
Sbjct: 391 KAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINEVGIPLEVAQRITFEERVSIHNIHYLQ 450
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
KLVDE LCLTY++G STYSLREGSKGHT+L+PGQ+VHRRIMDGD VFINRPPTTHKHSLQ
Sbjct: 451 KLVDENLCLTYKEGMSTYSLREGSKGHTYLKPGQIVHRRIMDGDTVFINRPPTTHKHSLQ 510
Query: 729 ALSVYIHDDH 758
AL VYIHDDH
Sbjct: 511 ALVVYIHDDH 520
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 363 bits (931), Expect = 5e-98
Identities = 171/250 (68%), Positives = 213/250 (85%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
K+ Q+T +KL+ KGYFPQDGY+L++LPVPPNCLSVP +SDG+S MS+D ++T+L+K+LR
Sbjct: 189 KRFPQETNRKLAIKGYFPQDGYVLKYLPVPPNCLSVPVVSDGVSVMSSDPAMTILRKLLR 248
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASST 368
+VEII++SRSG PNFES ++EANDLQ+ V QYL+ RGT K + SST
Sbjct: 249 KVEIIRSSRSGEPNFESHQVEANDLQSVVDQYLQVRGTSKATRDIETRYGVNKELNDSST 308
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSR+VITGD +K ++E+G+P E+AQ+ITFEERV+ HN+ +LQ
Sbjct: 309 KAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINEVGIPLEVAQRITFEERVSIHNIRYLQ 368
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
KLVDE +CLTY++G STYSLREGSKGHT+L+PGQ+VHRRIMDGD+VFINRPPTTHKHSLQ
Sbjct: 369 KLVDENMCLTYKEGVSTYSLREGSKGHTYLKPGQIVHRRIMDGDVVFINRPPTTHKHSLQ 428
Query: 729 ALSVYIHDDH 758
AL VYIHDDH
Sbjct: 429 ALVVYIHDDH 438
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
max]
Length = 2020
Score = 363 bits (931), Expect = 5e-98
Identities = 174/250 (69%), Positives = 212/250 (84%), Gaps = 13/250 (5%)
Frame = +3
Query: 48 KKISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLR 227
K+I +T+KKL+ KG+FPQDGY+L++LPVPPNCLSVP++SDG S MS+D S+T+L+K+LR
Sbjct: 189 KRIPIETKKKLAGKGFFPQDGYVLKYLPVPPNCLSVPEVSDGASVMSSDPSMTILRKLLR 248
Query: 228 QVEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASST 368
+VEIIK+SRSG PNFES +EANDLQ+ V QY + RGT K +ASST
Sbjct: 249 KVEIIKSSRSGEPNFESHHVEANDLQSVVDQYFQIRGTSKPARDIETHFGVNKELTASST 308
Query: 369 KAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQ 548
KAWLEKM+TLFIRKGSGFSSR+VITGD +K ++E+G+P E+AQ+ITFEERVN HN+ +LQ
Sbjct: 309 KAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNIRYLQ 368
Query: 549 KLVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQ 728
KLVDE LCLTY++G STYSLREGSKGH +L+PGQ+VHRRIMDGDIVFINRPPTTHKHSLQ
Sbjct: 369 KLVDEHLCLTYKEGVSTYSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQ 428
Query: 729 ALSVYIHDDH 758
AL VYIH+DH
Sbjct: 429 ALYVYIHEDH 438
>ref|XP_002299208.2| DNA-directed RNA polymerase alpha subunit family protein [Populus
trichocarpa] gi|550346661|gb|EEE84013.2| DNA-directed
RNA polymerase alpha subunit family protein [Populus
trichocarpa]
Length = 842
Score = 361 bits (926), Expect = 2e-97
Identities = 177/249 (71%), Positives = 207/249 (83%), Gaps = 13/249 (5%)
Frame = +3
Query: 51 KISQDTRKKLSSKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLRQ 230
K+ +R + KGYFPQDGYILQ LPVPPNCLSVP +SDGIS MS+D SI++LKKVL+Q
Sbjct: 106 KLPSRSRLRDGGKGYFPQDGYILQQLPVPPNCLSVPAVSDGISIMSSDLSISILKKVLKQ 165
Query: 231 VEIIKNSRSGMPNFESQEIEANDLQAAVAQYLEFRGTGKVE-------------SASSTK 371
VE+IK+SRSG PNF++ + EAN LQ+ V +YL+ RGT K S SSTK
Sbjct: 166 VEVIKSSRSGAPNFDAHKDEANSLQSMVDRYLQVRGTTKTSRDVDVRYGVKKDSSESSTK 225
Query: 372 AWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMAFLQK 551
AWLEKM+TLFIRKGSGFSSRSVITGD + V+++G+P+EIAQ+ITFEERV+ HNM +LQ+
Sbjct: 226 AWLEKMRTLFIRKGSGFSSRSVITGDAYTKVNQVGIPYEIAQRITFEERVSVHNMRYLQE 285
Query: 552 LVDEKLCLTYRDGQSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQA 731
LVD KLCLTYRDG STYSLREGSKGHTFLRPGQVVHRRI+DGD+VFINRPPTTHKHSLQA
Sbjct: 286 LVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIIDGDVVFINRPPTTHKHSLQA 345
Query: 732 LSVYIHDDH 758
LSVY+HDDH
Sbjct: 346 LSVYVHDDH 354