BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00016839
         (1302 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus...   394   e-107
gb|EPS60582.1| hypothetical protein M569_14220, partial [Genlise...   348   2e-93
ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr...   338   4e-90
ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prun...   337   9e-90
ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [...   336   2e-89
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   335   3e-89
ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like...   333   1e-88
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like...   330   8e-88
ref|XP_007031141.1| Pseudouridine synthase family protein isofor...   330   8e-88
ref|XP_007031140.1| Pseudouridine synthase family protein isofor...   330   8e-88
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   330   8e-88
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [...   330   8e-88
ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutr...   328   2e-87
gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]           324   6e-86
gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]           323   8e-86
ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [...   323   1e-85
ref|XP_003591214.1| Lon protease-like protein [Medicago truncatu...   316   1e-83
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...   315   3e-83
gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]       313   1e-82
ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thalian...   313   1e-82

>gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus guttatus]
          Length = 323

 Score =  394 bits (1011), Expect = e-107
 Identities = 205/326 (62%), Positives = 227/326 (69%), Gaps = 5/326 (1%)
 Frame = +2

Query: 2   MATEDRTNSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXND 181
           MA E R NS   Q ENAP +L +Y            KNVE                   D
Sbjct: 1   MAAESRLNSPNTQPENAPQSLQNYPVPLSPPPPLISKNVELNRALTASSKSSLFSLSRKD 60

Query: 182 VLFEDEWFIAVNKPCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDTSG 361
           VLFEDEW IAVNKP GIYCE++LSSV+  +++DQ         KLQELHLSNRLDRDTSG
Sbjct: 61  VLFEDEWLIAVNKPNGIYCETILSSVQILLNTDQ--------VKLQELHLSNRLDRDTSG 112

Query: 362 VTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAI 541
           V ++TKSHKVAAKLVKAFT+HMVKKTYLA CVG+ PKW  +IIKSGHGRSKHGAWRVYA 
Sbjct: 113 VILITKSHKVAAKLVKAFTNHMVKKTYLASCVGTFPKWKNMIIKSGHGRSKHGAWRVYAY 172

Query: 542 SDAGRTLPGGSFVRDMETYFEVLSVNGKGCSLGSEKN-----GXXXXXXXXXXXXXXXXX 706
           SD GR LPGGSFVRDMET F+VLSVNGK CS  S+ N                       
Sbjct: 173 SDVGRVLPGGSFVRDMETSFDVLSVNGKSCSQESDANHEEEEKIVAEEKSEVVGSCCSDE 232

Query: 707 XXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 886
              V+VRA+PRSGRTHQIRLHCQYLGIPI GDVKY+GVYEWKDR YEGHELHAE+LSFEH
Sbjct: 233 RDEVVVRAHPRSGRTHQIRLHCQYLGIPIIGDVKYEGVYEWKDRTYEGHELHAETLSFEH 292

Query: 887 PVTGQSVLIHAPLPLWASEELAKVCL 964
           P+TGQSV I APLPLWAS+ LA+  L
Sbjct: 293 PITGQSVFIQAPLPLWASQALAQAQL 318


>gb|EPS60582.1| hypothetical protein M569_14220, partial [Genlisea aurea]
          Length = 307

 Score =  348 bits (894), Expect = 2e-93
 Identities = 180/301 (59%), Positives = 211/301 (70%), Gaps = 1/301 (0%)
 Frame = +2

Query: 44  ENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWFIAVNKP 223
           ++A  TLG+Y            K+VE                  NDVLFEDEW IAVNKP
Sbjct: 15  KSAAETLGNYPAPLSPPPPPISKDVELSRALTASSSSALFSLSENDVLFEDEWLIAVNKP 74

Query: 224 CGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAKL 403
            GIYCES+LSSVRTF++S     +P   A+ QELHLSNRLDRDTSGVT+VTKSHKVAAKL
Sbjct: 75  PGIYCESILSSVRTFLNS-----VP---ARTQELHLSNRLDRDTSGVTLVTKSHKVAAKL 126

Query: 404 VKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFVR 583
           VK FTDH V+KTY+A C+G+ P+   I++KSGHGRSKHGAWRVYA SD  R LPGGS +R
Sbjct: 127 VKTFTDHKVQKTYIASCIGTPPETHSILVKSGHGRSKHGAWRVYAFSDIARKLPGGSLIR 186

Query: 584 DMETYFEVLSVNGKGCSLGS-EKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGRTHQI 760
           +MET F+V++VNG+  S  S + +                     V+VRAYP+SGRTHQI
Sbjct: 187 EMETLFQVIAVNGEKISSPSPDSDHQHIVVEAKSRISSDSDKASEVIVRAYPKSGRTHQI 246

Query: 761 RLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPLWAS 940
           RLHCQYLGIPIRGDVKYDGVYEW  R YE H+LHAESLSFEHPVTG S++I APLPLWA 
Sbjct: 247 RLHCQYLGIPIRGDVKYDGVYEWGGRKYECHQLHAESLSFEHPVTGHSLVIQAPLPLWAQ 306

Query: 941 E 943
           +
Sbjct: 307 Q 307


>ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
           gi|567881937|ref|XP_006433527.1| hypothetical protein
           CICLE_v10001637mg [Citrus clementina]
           gi|557535648|gb|ESR46766.1| hypothetical protein
           CICLE_v10001637mg [Citrus clementina]
           gi|557535649|gb|ESR46767.1| hypothetical protein
           CICLE_v10001637mg [Citrus clementina]
          Length = 357

 Score =  338 bits (866), Expect = 4e-90
 Identities = 175/317 (55%), Positives = 207/317 (65%), Gaps = 8/317 (2%)
 Frame = +2

Query: 23  NSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEW 202
           N +    ENAP    +Y            K++E                  +DVL+EDEW
Sbjct: 36  NPTEPTCENAPQIQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEW 95

Query: 203 FIAVNKPCGIYCESVLSSVRTFMSSDQ-----GSVIPEEQAKLQELHLSNRLDRDTSGVT 367
           F+AVNKP G+YCESVL+SV  F++ D      G +    +  L ELHL+NRLDRDTSGV 
Sbjct: 96  FVAVNKPQGVYCESVLASVPCFLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVM 155

Query: 368 VVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISD 547
           V+TKSHKVA+KLVKAFTDH V KTY+ALC+G  PKW +I I SGHGRSK GAWRVYA SD
Sbjct: 156 VITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASD 215

Query: 548 AGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXXXXXXXV 718
            GR LPGGS VRDM T FEVLSVNG+G        +++                     +
Sbjct: 216 VGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEHEENNIVVEKKAVLDADAKKNEI 275

Query: 719 LVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTG 898
           LVRA+PRSGRTHQIRLHCQYLGI IRGDVKY+GVYEW  + Y+GHELHAESLSF+HPVTG
Sbjct: 276 LVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTG 335

Query: 899 QSVLIHAPLPLWASEEL 949
             V++ APLPLW +E L
Sbjct: 336 CPVMVQAPLPLWGTEAL 352


>ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
           gi|462401230|gb|EMJ06787.1| hypothetical protein
           PRUPE_ppa008866mg [Prunus persica]
          Length = 316

 Score =  337 bits (863), Expect = 9e-90
 Identities = 174/307 (56%), Positives = 204/307 (66%), Gaps = 4/307 (1%)
 Frame = +2

Query: 41  SENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWFIAVNK 220
           S+NA  T  +Y            K++E                  +DV+FED+W I VNK
Sbjct: 12  SQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFEDQWLIVVNK 71

Query: 221 PCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 400
           P G+YCESVL SV   +     S  P  Q    ELHL+NRLDRDTSG+ V+TKSHKVA+K
Sbjct: 72  PQGVYCESVLESVPQLLCDSAESGTPANQL---ELHLANRLDRDTSGLMVITKSHKVASK 128

Query: 401 LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 580
           LVKAFTDH + KTY+A C+GS PKW++I +KSGHGRSK GAWRVYA SD GRTLPGGS V
Sbjct: 129 LVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMV 188

Query: 581 RDMETYFEVLSVNGKGCSLGS----EKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGR 748
           RDMET FEVLS+NG+G SL      +K+                     +LVRA PRSGR
Sbjct: 189 RDMETSFEVLSINGQG-SLKEPSEFKKDEANTIVVQEKAVIDKDTKKDEILVRARPRSGR 247

Query: 749 THQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLP 928
           THQIRLHCQYLGI IRGDVKY+GVYEWK R Y+GHELHAESLSFEHP+TG  V+  AP+P
Sbjct: 248 THQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGLPVMFQAPVP 307

Query: 929 LWASEEL 949
            WAS+ L
Sbjct: 308 SWASQAL 314


>ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum]
          Length = 308

 Score =  336 bits (861), Expect = 2e-89
 Identities = 168/258 (65%), Positives = 192/258 (74%), Gaps = 2/258 (0%)
 Frame = +2

Query: 182 VLFEDEWFIAVNKPCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDTSG 361
           V+FEDEW IAVNKP GIYCESVLSS+   ++ D G       A + ELHL+NRLDRDTSG
Sbjct: 54  VIFEDEWIIAVNKPQGIYCESVLSSLPDLLN-DTG-------ANVSELHLANRLDRDTSG 105

Query: 362 VTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAI 541
           V ++TK HKVAAK VKAFTDH V+KTYLA CVG  PKW+KI +KSGHGRSK+GAWRVYA 
Sbjct: 106 VMLITKLHKVAAKFVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAA 165

Query: 542 SDAGRTLPGGSFVRDMETYFEVLSVNGKGC--SLGSEKNGXXXXXXXXXXXXXXXXXXXX 715
           SDAGR LPGGS V+DMET FEVLSVNG GC   +                          
Sbjct: 166 SDAGRKLPGGSLVKDMETSFEVLSVNGLGCFKEVSDLHKDEDIVIVQEKSVIGCDLKKDE 225

Query: 716 VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 895
           +LVRA PRSGRTHQIRLHCQYLGIPIRGDV+Y+GVYEWK  +Y+ HELHAESLSFEHP+T
Sbjct: 226 ILVRASPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYEWKGNIYDSHELHAESLSFEHPIT 285

Query: 896 GQSVLIHAPLPLWASEEL 949
           G+S+L+ APLP WA + L
Sbjct: 286 GKSMLLQAPLPSWAIQPL 303


>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 321

 Score =  335 bits (859), Expect = 3e-89
 Identities = 170/303 (56%), Positives = 203/303 (66%), Gaps = 4/303 (1%)
 Frame = +2

Query: 41  SENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWFIAVNK 220
           S+N P TL +Y            K +E                  +DVL+ED+W IAVNK
Sbjct: 12  SQNDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVNK 71

Query: 221 PCGIYCESVLSSVRTFMSSDQGSVIPEEQAK--LQELHLSNRLDRDTSGVTVVTKSHKVA 394
           P G+YCE+VL SV   +++      P E A+    E HL+NRLDRDTSGV V+TKSHKVA
Sbjct: 72  PQGVYCETVLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSHKVA 131

Query: 395 AKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGS 574
           +KLVKAFTDH +KKTY+ALC+G  PKW+KI IKSGHGRSK G WRVYA SD G+TLPGGS
Sbjct: 132 SKLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGS 191

Query: 575 FVRDMETYFEVLSVNGKGC--SLGSEKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGR 748
            V+DMET FE+LSVNG+G    L   +                      +LVRA+P+SGR
Sbjct: 192 TVKDMETSFELLSVNGQGSFKELSEFEKDENILVVEEKAAKNADVKKVEILVRAFPQSGR 251

Query: 749 THQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLP 928
           THQIRLHCQYLGI IRGDVKY+GVYEW+ R Y+GHELHAE+LSFEHPVTG  V++ APLP
Sbjct: 252 THQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVMLRAPLP 311

Query: 929 LWA 937
            WA
Sbjct: 312 SWA 314


>ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis]
          Length = 324

 Score =  333 bits (853), Expect = 1e-88
 Identities = 171/316 (54%), Positives = 206/316 (65%), Gaps = 8/316 (2%)
 Frame = +2

Query: 20  TNSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDE 199
           +N +   S+NAP T  +Y            K++E                  +DVL+EDE
Sbjct: 2   SNPTEPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDE 61

Query: 200 WFIAVNKPCGIYCESVLSSVRTFMSSDQ-----GSVIPEEQAKLQELHLSNRLDRDTSGV 364
           W +AVNKP G+YCESVL+SV   ++ D      G +    +  L ELHL+NRLDRDTSGV
Sbjct: 62  WLVAVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGV 121

Query: 365 TVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAIS 544
            V+TKSHKVA+KLVKAFTDH V KTY+ALC+G  PKW +I I SGHGRSK GAWRVYA S
Sbjct: 122 MVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAAS 181

Query: 545 DAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXXXXXXX 715
           D GR LPGGS VRDM T FEVLSVNG+G        +++                     
Sbjct: 182 DVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEDEENNIVVEKKAVLDADAKKNE 241

Query: 716 VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 895
           +LVR +PRSGRTHQIRLHCQYLGI IRGDVKY+GVYEW  + Y+GHELHAESLS EHP+T
Sbjct: 242 ILVRVFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSLEHPIT 301

Query: 896 GQSVLIHAPLPLWASE 943
           G  V++ APLPLWA++
Sbjct: 302 GCPVMVQAPLPLWATQ 317


>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
          Length = 332

 Score =  330 bits (846), Expect = 8e-88
 Identities = 166/254 (65%), Positives = 188/254 (74%), Gaps = 2/254 (0%)
 Frame = +2

Query: 182 VLFEDEWFIAVNKPCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDTSG 361
           V+FEDEW IAVNKP GIYCESVLSS+   ++ D G       A + ELHL+NRLDRDTSG
Sbjct: 84  VIFEDEWIIAVNKPQGIYCESVLSSLPDLLN-DTG-------ANVSELHLANRLDRDTSG 135

Query: 362 VTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAI 541
           V ++TK HKVAAK VKAFTDH V+KTYLA CVG  PKW+KI +KSGHGRSK+GAWRVYA 
Sbjct: 136 VMLITKLHKVAAKFVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAA 195

Query: 542 SDAGRTLPGGSFVRDMETYFEVLSVNGKGC--SLGSEKNGXXXXXXXXXXXXXXXXXXXX 715
           SDAGR LPGGS V+DMET FEVLSVNG GC   +                          
Sbjct: 196 SDAGRKLPGGSLVKDMETSFEVLSVNGLGCFKEVSDFHKDEDVVIVQEKSVIGCDLKKDE 255

Query: 716 VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 895
           +LVRA PRSGRTHQIRLHCQYLGIPIRGDV+Y+GVYEWK   Y+ HELHAESLSFEHP+T
Sbjct: 256 ILVRASPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYEWKGSRYDSHELHAESLSFEHPIT 315

Query: 896 GQSVLIHAPLPLWA 937
           G+ +L+ APLP WA
Sbjct: 316 GKPMLLQAPLPSWA 329


>ref|XP_007031141.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
           gi|508719746|gb|EOY11643.1| Pseudouridine synthase
           family protein isoform 2 [Theobroma cacao]
          Length = 313

 Score =  330 bits (846), Expect = 8e-88
 Identities = 168/263 (63%), Positives = 194/263 (73%), Gaps = 5/263 (1%)
 Frame = +2

Query: 176 NDVLFEDEWFIAVNKPCGIYCESVLSSVRTFMSSDQGS--VIPEEQAKLQELHLSNRLDR 349
           +D+L+EDEW IAVNKP GIYC+SVL+S+  F+S    S  +    QA   ELHL+NRLDR
Sbjct: 46  SDILYEDEWLIAVNKPQGIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDR 105

Query: 350 DTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWR 529
           DTSG+ V+TKSHKVAA LVKAFT+HMV KTY+A C+GS PK ++I IKSGHGRSK GAWR
Sbjct: 106 DTSGIMVITKSHKVAAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWR 165

Query: 530 VYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXX 700
           VYA  D GR LPGGS VRDM T FEVLS+NG+        S K+                
Sbjct: 166 VYAAGDVGRKLPGGSIVRDMGTTFEVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVD 225

Query: 701 XXXXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSF 880
                +LVRA+PRSGRTHQIRLHCQYLGIPIRGDVKY+GVYEWK R Y+ HELHAESLSF
Sbjct: 226 AQKDEILVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSF 285

Query: 881 EHPVTGQSVLIHAPLPLWASEEL 949
           +HPVTG  V+I APLPLWAS+ L
Sbjct: 286 QHPVTGFPVMIQAPLPLWASQAL 308


>ref|XP_007031140.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
           gi|508719745|gb|EOY11642.1| Pseudouridine synthase
           family protein isoform 1 [Theobroma cacao]
          Length = 345

 Score =  330 bits (846), Expect = 8e-88
 Identities = 168/263 (63%), Positives = 194/263 (73%), Gaps = 5/263 (1%)
 Frame = +2

Query: 176 NDVLFEDEWFIAVNKPCGIYCESVLSSVRTFMSSDQGS--VIPEEQAKLQELHLSNRLDR 349
           +D+L+EDEW IAVNKP GIYC+SVL+S+  F+S    S  +    QA   ELHL+NRLDR
Sbjct: 78  SDILYEDEWLIAVNKPQGIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDR 137

Query: 350 DTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWR 529
           DTSG+ V+TKSHKVAA LVKAFT+HMV KTY+A C+GS PK ++I IKSGHGRSK GAWR
Sbjct: 138 DTSGIMVITKSHKVAAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWR 197

Query: 530 VYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXX 700
           VYA  D GR LPGGS VRDM T FEVLS+NG+        S K+                
Sbjct: 198 VYAAGDVGRKLPGGSIVRDMGTTFEVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVD 257

Query: 701 XXXXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSF 880
                +LVRA+PRSGRTHQIRLHCQYLGIPIRGDVKY+GVYEWK R Y+ HELHAESLSF
Sbjct: 258 AQKDEILVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSF 317

Query: 881 EHPVTGQSVLIHAPLPLWASEEL 949
           +HPVTG  V+I APLPLWAS+ L
Sbjct: 318 QHPVTGFPVMIQAPLPLWASQAL 340


>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
           [Cucumis sativus]
          Length = 366

 Score =  330 bits (846), Expect = 8e-88
 Identities = 171/313 (54%), Positives = 203/313 (64%), Gaps = 3/313 (0%)
 Frame = +2

Query: 20  TNSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDE 199
           T+SS   + N P T  +Y            KN+E                  NDV++EDE
Sbjct: 40  TDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDE 99

Query: 200 WFIAVNKPCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTK 379
           W IAVNKP GIYCE+VL++V   +     + I   +  L ELHL+NRLDRDTSGV V+TK
Sbjct: 100 WLIAVNKPQGIYCENVLAAVPRLLGDSANAGI---KTSLPELHLANRLDRDTSGVMVITK 156

Query: 380 SHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRT 559
           SHKVA+KLVKAFTDH V K+Y+A CVG+ PKW KI +KSGHGRSK G WRVYA +D GR+
Sbjct: 157 SHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWXKINVKSGHGRSKFGVWRVYAAADVGRS 216

Query: 560 LPGGSFVRDMETYFEVLSVNGKGCSLGSEK---NGXXXXXXXXXXXXXXXXXXXXVLVRA 730
           LPGGS VRDMETYFEVLSVNGK      +K                         +L+RA
Sbjct: 217 LPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRA 276

Query: 731 YPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVL 910
            PRSGRTHQIRLHCQYLGIPIRGDVKY+GV EW +++Y+ HELHAESL F HPVTG  + 
Sbjct: 277 RPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLK 336

Query: 911 IHAPLPLWASEEL 949
           + APLP WAS+ L
Sbjct: 337 LQAPLPSWASQAL 349


>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
          Length = 366

 Score =  330 bits (846), Expect = 8e-88
 Identities = 171/313 (54%), Positives = 203/313 (64%), Gaps = 3/313 (0%)
 Frame = +2

Query: 20  TNSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDE 199
           T+SS   + N P T  +Y            KN+E                  NDV++EDE
Sbjct: 40  TDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDE 99

Query: 200 WFIAVNKPCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTK 379
           W IAVNKP GIYCE+VL++V   +     + I   +  L ELHL+NRLDRDTSGV V+TK
Sbjct: 100 WLIAVNKPQGIYCENVLAAVPRLLGDSANAGI---KTSLPELHLANRLDRDTSGVMVITK 156

Query: 380 SHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRT 559
           SHKVA+KLVKAFTDH V K+Y+A CVG+ PKW KI +KSGHGRSK G WRVYA +D GR+
Sbjct: 157 SHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRS 216

Query: 560 LPGGSFVRDMETYFEVLSVNGKGCSLGSEK---NGXXXXXXXXXXXXXXXXXXXXVLVRA 730
           LPGGS VRDMETYFEVLSVNGK      +K                         +L+RA
Sbjct: 217 LPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRA 276

Query: 731 YPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVL 910
            PRSGRTHQIRLHCQYLGIPIRGDVKY+GV EW +++Y+ HELHAESL F HPVTG  + 
Sbjct: 277 RPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLK 336

Query: 911 IHAPLPLWASEEL 949
           + APLP WAS+ L
Sbjct: 337 LQAPLPSWASQAL 349


>ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutrema salsugineum]
           gi|557088941|gb|ESQ29721.1| hypothetical protein
           EUTSA_v10023586mg [Eutrema salsugineum]
          Length = 333

 Score =  328 bits (842), Expect = 2e-87
 Identities = 160/255 (62%), Positives = 189/255 (74%)
 Frame = +2

Query: 176 NDVLFEDEWFIAVNKPCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDT 355
           NDVL+EDEW +AVNKP GIYCESVLSS           VI +  +   E HL+NRLDRDT
Sbjct: 84  NDVLYEDEWLMAVNKPKGIYCESVLSSAP--------KVIVDSSSTANEFHLANRLDRDT 135

Query: 356 SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 535
           SGV ++TKSHKVAAKLVKAFT+H ++K+Y+ALC+GS P W KI ++SGHGRSKHGAWRVY
Sbjct: 136 SGVMLITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWSKITVRSGHGRSKHGAWRVY 195

Query: 536 AISDAGRTLPGGSFVRDMETYFEVLSVNGKGCSLGSEKNGXXXXXXXXXXXXXXXXXXXX 715
           A  D GR LPGGSFVRDMET FEV+SVNG+     +E                       
Sbjct: 196 AALDVGRVLPGGSFVRDMETTFEVVSVNGE----KTEPLEVESVIVVEGEPGLSCVGDDV 251

Query: 716 VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 895
           V+VRA+PRSGRTHQIRLHC+YLGIPIRGDVKY G+YEW+ R +EGHELHAESLSF+HPVT
Sbjct: 252 VVVRAFPRSGRTHQIRLHCRYLGIPIRGDVKYHGMYEWRGRTFEGHELHAESLSFDHPVT 311

Query: 896 GQSVLIHAPLPLWAS 940
           G+ ++I APLP W +
Sbjct: 312 GEPIVIRAPLPCWVA 326


>gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score =  324 bits (830), Expect = 6e-86
 Identities = 169/304 (55%), Positives = 197/304 (64%), Gaps = 3/304 (0%)
 Frame = +2

Query: 41  SENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWFIAVNK 220
           S+NA  T  +Y            K+VE                  ND +FEDE  +AVNK
Sbjct: 12  SQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNK 71

Query: 221 PCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 400
           P GIYCESV  SVR  +S        E +A   ELHL+NRLDRDTSG+ ++TKSHKVA+K
Sbjct: 72  PQGIYCESVFDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASK 131

Query: 401 LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 580
           LVKAFT H V KTY+A CVGS PKW+ I IKSGHGRSK GAWRVYA SD GRTLPGGS V
Sbjct: 132 LVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVV 191

Query: 581 RDMETYFEVLSVNGKGCSLGS---EKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGRT 751
           RDMET FEVLSVNG+  S       K+G                    +LVRA P+SGR+
Sbjct: 192 RDMETSFEVLSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDGKKDEILVRARPKSGRS 251

Query: 752 HQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPL 931
           HQIRLHCQYLGI +RGDVKY+GV +WK + Y GHELHAESLSFEHP+T   V++  PLP+
Sbjct: 252 HQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSLPVVLSTPLPM 311

Query: 932 WASE 943
           WAS+
Sbjct: 312 WASQ 315


>gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score =  323 bits (829), Expect = 8e-86
 Identities = 169/304 (55%), Positives = 197/304 (64%), Gaps = 3/304 (0%)
 Frame = +2

Query: 41  SENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWFIAVNK 220
           S+NA  T  +Y            K+VE                  ND +FEDE  +AVNK
Sbjct: 12  SQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNK 71

Query: 221 PCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 400
           P GIYCESV  SVR  +S        E +A   ELHL+NRLDRDTSG+ ++TKSHKVA+K
Sbjct: 72  PQGIYCESVFDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASK 131

Query: 401 LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 580
           LVKAFT H V KTY+A CVGS PKW+ I IKSGHGRSK GAWRVYA SD GRTLPGGS V
Sbjct: 132 LVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVV 191

Query: 581 RDMETYFEVLSVNGKGCSLGS---EKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGRT 751
           RDMET FEVLSVNG+  S       K+G                    +LVRA P+SGR+
Sbjct: 192 RDMETSFEVLSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDGKKDEILVRARPKSGRS 251

Query: 752 HQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPL 931
           HQIRLHCQYLGI +RGDVKY+GV +WK + Y GHELHAESLSFEHP+T   V++  PLP+
Sbjct: 252 HQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSLLVVLSTPLPM 311

Query: 932 WASE 943
           WAS+
Sbjct: 312 WASQ 315


>ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [Fragaria vesca subsp.
           vesca]
          Length = 347

 Score =  323 bits (827), Expect = 1e-85
 Identities = 165/312 (52%), Positives = 197/312 (63%), Gaps = 4/312 (1%)
 Frame = +2

Query: 20  TNSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDE 199
           T S    S+NA     +Y            KN+E                  NDV++ED+
Sbjct: 35  TMSDQPSSQNALQISQNYPVPLSPPLPLISKNMELARAMSASSKSSLFTLSRNDVVYEDQ 94

Query: 200 WFIAVNKPCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTK 379
           W I VNKP GIYCE+VL SV   ++          + K  E+HL+NRLDRDTSGV ++TK
Sbjct: 95  WLIVVNKPQGIYCETVLESVPKLLAESG------LEGKAPEIHLANRLDRDTSGVMIITK 148

Query: 380 SHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRT 559
           SHKVAAKLVKAFTDH V KTY+A C+GS PKW++I +KSGHGRSK GAWRVYA SD GR 
Sbjct: 149 SHKVAAKLVKAFTDHKVSKTYIACCIGSAPKWERITVKSGHGRSKFGAWRVYAASDVGRP 208

Query: 560 LPGGSFVRDMETYFEVLSVNGKGCSLGSEK----NGXXXXXXXXXXXXXXXXXXXXVLVR 727
           LPGGS VRDMET FE+LS+NG+GC     +    +                     +LV 
Sbjct: 209 LPGGSVVRDMETSFEILSINGQGCFREPSEFRIDDDKILVVEEKAVIIDGDAKKDEILVI 268

Query: 728 AYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSV 907
           A PRSGRTHQIRLHCQYLGI IRGDVKY+GVYEWK   Y GHELHAES+S +HP+TG  +
Sbjct: 269 ARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGLPI 328

Query: 908 LIHAPLPLWASE 943
           L  APLP WA++
Sbjct: 329 LFRAPLPSWANQ 340


>ref|XP_003591214.1| Lon protease-like protein [Medicago truncatula]
           gi|355480262|gb|AES61465.1| Lon protease-like protein
           [Medicago truncatula]
          Length = 1262

 Score =  316 bits (810), Expect = 1e-83
 Identities = 167/316 (52%), Positives = 201/316 (63%), Gaps = 5/316 (1%)
 Frame = +2

Query: 23  NSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEW 202
           +S P  SEN P  L +Y            K +E                    +++EDE+
Sbjct: 2   SSPPHLSENTPTVLSNYPIPLSPQLPAISKQIELNRATIATSNSELFSLAQTHIIYEDEY 61

Query: 203 FIAVNKPCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKS 382
            +AVNKP GIYC++VL+S+++   S  GS          ELHL+NRLDRDTSGV ++TKS
Sbjct: 62  LLAVNKPQGIYCDNVLTSLQS--QSTVGS----------ELHLANRLDRDTSGVMLITKS 109

Query: 383 HKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTL 562
           HK+A+KLVKAFTD  VKKTY+A C G VP W  I +KSGHGRSK GAWRVY  SD+GR L
Sbjct: 110 HKIASKLVKAFTDREVKKTYIAFCTGRVPDWKTITVKSGHGRSKFGAWRVYGFSDSGRGL 169

Query: 563 PGGSFVRDMETYFEVLSVNGKG-----CSLGSEKNGXXXXXXXXXXXXXXXXXXXXVLVR 727
           PGGS VR+MET FE LSVNGKG       LG E+                      ++VR
Sbjct: 170 PGGSVVREMETSFEFLSVNGKGGFREVTELGFEEGN--VVVVEEKAVKMEGDDENEIVVR 227

Query: 728 AYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSV 907
           AYPRSGRTHQIRLHCQYLGI I GDVKY+GVYEWK RVY+GH LHAE+LSF+HPVTG  V
Sbjct: 228 AYPRSGRTHQIRLHCQYLGISIIGDVKYEGVYEWKGRVYDGHHLHAETLSFDHPVTGVRV 287

Query: 908 LIHAPLPLWASEELAK 955
           +  APLP WA++ L +
Sbjct: 288 MFRAPLPQWANQALLR 303



 Score =  101 bits (252), Expect = 6e-19
 Identities = 71/210 (33%), Positives = 97/210 (46%)
 Frame = +2

Query: 329  LSNRLDRDTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGR 508
            L + + R T  V ++ KSHKVA+KLVKAFTDH V+KTY++LC G  P W+ I ++S +GR
Sbjct: 927  LQSTIPRQTY-VMLIIKSHKVASKLVKAFTDHKVQKTYISLCTGQTPNWETITVRSCYGR 985

Query: 509  SKHGAWRVYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGCSLGSEKNGXXXXXXXXXXX 688
            SK G  RVY             F+   E  FEV              +G           
Sbjct: 986  SKFGTRRVYV------------FLEVAELGFEV-------------SDG----------- 1009

Query: 689  XXXXXXXXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAE 868
                       V    ++ +   I+ HCQYLGI I GDVKY+G                 
Sbjct: 1010 -----------VVVEEKAVKMEGIQFHCQYLGISIIGDVKYEG----------------- 1041

Query: 869  SLSFEHPVTGQSVLIHAPLPLWASEELAKV 958
               F+H VTG  V++ A LP W ++ L+ +
Sbjct: 1042 ---FDHLVTGVRVMLCASLPQWVNQVLSNM 1068


>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score =  315 bits (807), Expect = 3e-83
 Identities = 162/306 (52%), Positives = 195/306 (63%), Gaps = 3/306 (0%)
 Frame = +2

Query: 41  SENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWFIAVNK 220
           S++AP  L +Y            K++E                  +D+LFED+W +AVNK
Sbjct: 44  SKDAPQILTNYPKPISPPLPAISKHIEQSRAMSASSRSSLFSLCRSDILFEDQWLMAVNK 103

Query: 221 PCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 400
           P G+YCE++L SV   +    G          + LHL+NRLDRDTSGV V+TKSH+VAAK
Sbjct: 104 PQGVYCETILLSVSRMLDDSDG------HDSCRSLHLANRLDRDTSGVMVITKSHQVAAK 157

Query: 401 LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 580
           L+KAF+D  V KTYLALC+G+ P W+KI IKSGHGRSK GAWRVYA SD GR LP    +
Sbjct: 158 LMKAFSDRKVTKTYLALCIGAAPTWEKITIKSGHGRSKFGAWRVYAASDVGRALPNAPAI 217

Query: 581 RDMETYFEVLSVNGKGCSL---GSEKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGRT 751
           +DM T FEVLSVNG+G       S K                      +LVRA+PRSGRT
Sbjct: 218 KDMVTSFEVLSVNGQGNVKELPESRKADETVLVVEERSVIDSNARQDEILVRAFPRSGRT 277

Query: 752 HQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPL 931
           HQIRLHCQYLGI IRGDVKY+GV+EWK ++Y+GHELHAESLSFEHPVTG  V   APLP 
Sbjct: 278 HQIRLHCQYLGISIRGDVKYEGVHEWKGKIYDGHELHAESLSFEHPVTGVDVAFRAPLPS 337

Query: 932 WASEEL 949
           WA + L
Sbjct: 338 WAVQAL 343


>gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]
          Length = 293

 Score =  313 bits (802), Expect = 1e-82
 Identities = 153/258 (59%), Positives = 183/258 (70%), Gaps = 3/258 (1%)
 Frame = +2

Query: 176 NDVLFEDEWFIAVNKPCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDT 355
           +D+L+EDE+ +AVNKP G+YCE+VL S    +                E HL+NRLDRDT
Sbjct: 46  DDILYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSSS-----------EYHLANRLDRDT 94

Query: 356 SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 535
           SGV ++TKSHKVAAKLVKAFT+H ++K+Y+ALC+GS P W ++ + SGHGRSKHGAWRVY
Sbjct: 95  SGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVY 154

Query: 536 AISDAGRTLPGGSFVRDMETYFEVLSVN---GKGCSLGSEKNGXXXXXXXXXXXXXXXXX 706
           A  D GR LPGGSFVRDMET FEV+SVN    + C L  + N                  
Sbjct: 155 AALDVGRVLPGGSFVRDMETTFEVVSVNSVKNESCEL-EDVNHVIVAEGERELSCGGDDD 213

Query: 707 XXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 886
              V+VRA+PRSGRTHQIRLHCQYLGIPIRGDVKY GVYEW  R +EGHELHAE LS +H
Sbjct: 214 DVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDH 273

Query: 887 PVTGQSVLIHAPLPLWAS 940
           PVTG S++I APLP WA+
Sbjct: 274 PVTGDSIVIRAPLPYWAA 291


>ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thaliana]
           gi|75140931|sp|Q7XA65.1|PUS1_ARATH RecName: Full=RNA
           pseudouridine synthase 1; AltName: Full=RNA
           pseudouridylate synthase 1; AltName: Full=RNA-uridine
           isomerase 1 gi|33589806|gb|AAQ22669.1| At1g56345
           [Arabidopsis thaliana] gi|110736414|dbj|BAF00174.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332195260|gb|AEE33381.1| RNA pseudourine synthase 1
           [Arabidopsis thaliana]
          Length = 322

 Score =  313 bits (802), Expect = 1e-82
 Identities = 153/258 (59%), Positives = 183/258 (70%), Gaps = 3/258 (1%)
 Frame = +2

Query: 176 NDVLFEDEWFIAVNKPCGIYCESVLSSVRTFMSSDQGSVIPEEQAKLQELHLSNRLDRDT 355
           +D+L+EDE+ +AVNKP G+YCE+VL S    +                E HL+NRLDRDT
Sbjct: 75  DDILYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSSS-----------EYHLANRLDRDT 123

Query: 356 SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 535
           SGV ++TKSHKVAAKLVKAFT+H ++K+Y+ALC+GS P W ++ + SGHGRSKHGAWRVY
Sbjct: 124 SGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVY 183

Query: 536 AISDAGRTLPGGSFVRDMETYFEVLSVN---GKGCSLGSEKNGXXXXXXXXXXXXXXXXX 706
           A  D GR LPGGSFVRDMET FEV+SVN    + C L  + N                  
Sbjct: 184 AALDVGRVLPGGSFVRDMETTFEVVSVNSVKNESCEL-EDVNHVIVAEGERELSCGGDDD 242

Query: 707 XXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 886
              V+VRA+PRSGRTHQIRLHCQYLGIPIRGDVKY GVYEW  R +EGHELHAE LS +H
Sbjct: 243 DVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDH 302

Query: 887 PVTGQSVLIHAPLPLWAS 940
           PVTG S++I APLP WA+
Sbjct: 303 PVTGDSIVIRAPLPYWAA 320