BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00015809
         (2149 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       526   e-146
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   501   e-139
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              497   e-138
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s...   496   e-137
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   491   e-136
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...   491   e-136
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   476   e-131
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   461   e-127
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ...   461   e-127
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]          458   e-126
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   456   e-125
ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252...   448   e-123
ref|XP_007046992.1| Transcription regulators,zinc ion binding, p...   447   e-123
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   446   e-122
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   445   e-122
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p...   443   e-121
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5...   432   e-118
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s...   424   e-115
gb|ABU45208.1| unknown [Solanum bulbocastanum]                        424   e-115
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr...   422   e-115

>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  526 bits (1354), Expect = e-146
 Identities = 293/630 (46%), Positives = 381/630 (60%), Gaps = 8/630 (1%)
 Frame = +2

Query: 242  AVAMDVELNLSEKKIEVVDDFMETEAAXXXXXXXXXXXXXXXXXXXXXXXXYFAPSVDPE 421
            +VAMDV+  + E+  +  D+ ME+                           Y  PS+DP 
Sbjct: 76   SVAMDVDAKVEEEAEQPKDEPMESREEGEDEIVREIDV-------------YLTPSIDPN 122

Query: 422  TQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDASADPKLQMDK 601
            T+LY+ QYPLRPLWRPYELD+RC+EVRVK  SAEVEVDLA+DV+SKNYD+ ADP++ M K
Sbjct: 123  TKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDADPRVSMTK 182

Query: 602  QTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKRTDVGNNDED 781
            QTL  SWKPP   G  VGVL GNKLHLNPIHAV+QLRPSM+H   + SK+RT   +N ED
Sbjct: 183  QTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASSNLED 242

Query: 782  VMKLEEQQEGKSSGVSKKQKAP-----EPIKDSEEGWVPLKYHSVSSDMAAGYLQKMVAR 946
              K EE     ++G  KKQ  P     E  KD+ E W+PL YH   SD++  Y++KMV  
Sbjct: 243  NTKGEE----VTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEH 298

Query: 947  EGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPLHRFD 1126
            + S + FSM+  DY+N+LCPGT  ++  S GP  R LL+ PL ERF+TWLL+GPP+HRFD
Sbjct: 299  DSSHIQFSMN-HDYVNTLCPGTSNENNGSNGP-SRVLLSLPLEERFRTWLLQGPPIHRFD 356

Query: 1127 TLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLLLFSKDVI 1300
             LK+LAPD S+               GLW+P++SL+YG   GI ALAR+YVLLLFS+  I
Sbjct: 357  ALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPI 416

Query: 1301 IKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKKQQEMWER 1480
            I + QLP+   L +AM+DVL  +A  R  L DWK KE PD+ FI+LNP +V++Q++ WER
Sbjct: 417  INNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIVREQEQTWER 476

Query: 1481 VEKSIEDSVSGGRNRPGAK-TSKSSAPKNLVESKGSGKLGAGPSSGSTSQNVMPEEVREA 1657
            +EK I + + G +NRP  K +S+     N   SK   K  +   +    +  M EE REA
Sbjct: 477  LEKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREA 536

Query: 1658 IKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSIDAFPNEFQAII 1837
            + KALQKLF+S K C FQQI  RLR+MA+ E+ R KG A E +AA H ++A P E QAII
Sbjct: 537  LPKALQKLFQSHKVC-FQQICQRLREMAVSESSRPKGFAREAIAAAHGVEAPPEELQAII 595

Query: 1838 SEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVEAVNLQLKGEVV 2017
            S+VA+N+HG+ V  SS  + ++D                                     
Sbjct: 596  SQVAINIHGVYVLKSSPVHPEHDEF----------------------------------- 620

Query: 2018 TDAAYKKVLHELCVSQGSGWVLRNDDSNLK 2107
                   V+ ELCVSQGS WVL++ D N K
Sbjct: 621  -------VVQELCVSQGSAWVLKSGDGNPK 643


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Solanum tuberosum]
          Length = 669

 Score =  501 bits (1291), Expect = e-139
 Identities = 283/570 (49%), Positives = 362/570 (63%), Gaps = 6/570 (1%)
 Frame = +2

Query: 404  PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDASADP 583
            PS DP TQLY+FQYPLR +WRPYEL+ERCQEVR++P++AE+EVDLAID++SKN+D  +  
Sbjct: 104  PSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVH 163

Query: 584  KLQMDKQTLALSWKPPK--ANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKRT 757
               + KQ L+ SW P    A+G  VGVL G+KLHLNP+HAV+QLRPS R+L   E KK  
Sbjct: 164  AATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNV 223

Query: 758  DVGNNDEDVMKLEEQQEGKSSGVSKKQKAPEPI-KDSEEGWVPLKYHSVSSDMAAGYLQK 934
               NNDE  ++ E+ +E +  G SKKQ  P  I KD  E W+ LKYH   SD++A YLQK
Sbjct: 224  TT-NNDEKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDISARYLQK 282

Query: 935  MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 1114
            M   EGS V FSMSP DYLN+  PG   D+   K  LR  L   PL ER +TWLLEGPP+
Sbjct: 283  MAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLK-ILRTRLSQLPLEERVRTWLLEGPPI 341

Query: 1115 HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLLLFS 1288
            HRFD LK+LAPD+S                GLWVP++SLVYG   G+  LARN+VL  F+
Sbjct: 342  HRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFT 401

Query: 1289 KDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKKQQE 1468
            K ++IK     + P  +KA    L  LA  R  L DWKLKE PD  F  L   VV+++Q 
Sbjct: 402  KGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQA 461

Query: 1469 MWERVEKSIEDSVSGGRNRPGAKTSKSSAPKNLVESKGSGKLGAGPSSGSTSQNVMPEEV 1648
             WE + K I D + GGRNRP  K      P N      +   G  P+S S  +  M EE+
Sbjct: 462  TWECLGKQINDVLPGGRNRPTMKN-----PLNPNADIPALPSGDKPTSSSLLRTSMSEEI 516

Query: 1649 REAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKG-PATETVAAVHSIDAFPNEF 1825
            REA+ KALQ++F++ K CSFQQI   LR + + ++   KG P     A++   DA   E 
Sbjct: 517  REALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASIDVFDAPQEEI 576

Query: 1826 QAIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVEAVNLQLK 2005
            QA+I++VAVN+HG+ V  SS DN  YD +RKVVIDLF+AEGP+A+LKKA + EA  LQL 
Sbjct: 577  QAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASVTEAAKLQLN 636

Query: 2006 GEVVTDAAYKKVLHELCVSQGSGWVLRNDD 2095
             + +T+  + KV+ ELC S+ S WVLR+ D
Sbjct: 637  RD-ITNVEFLKVMKELCHSEKSAWVLRSGD 665


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  497 bits (1280), Expect = e-138
 Identities = 273/580 (47%), Positives = 363/580 (62%), Gaps = 12/580 (2%)
 Frame = +2

Query: 404  PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDASADP 583
            P  D  T++Y+ QYPLRP WRPYEL ERC EVRVKP SAEVEVDL+IDV+SKNYD  A  
Sbjct: 113  PPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPN 172

Query: 584  KLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKRTDV 763
              +M KQTL+ SWKPP+  G  VGVL GNKLHLNPIHAV+QLRPSM +L+   +K++ +V
Sbjct: 173  AQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNV 232

Query: 764  GNNDEDVMKLEEQQEGKSSGVSKKQK-----APEPIKDSEEGWVPLKYHSVSSDMAAGYL 928
              +    +KLE   E +S G  KKQ        E   D+ E WVPLKYHS  SD +A YL
Sbjct: 233  TGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYL 292

Query: 929  QKMVAREGSEVHFSMSPDDYLNSLC-PGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEG 1105
            QKMVA + S + F MSP +Y+NSLC PG   D   SKG  RR LL+ PL ERFKT L EG
Sbjct: 293  QKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEG 352

Query: 1106 PPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY--GDGIAALARNYVLL 1279
            PP+HRF  LK+ APD+S+               GLWVP++SL++  G G+A LAR+Y+LL
Sbjct: 353  PPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILL 412

Query: 1280 LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1459
            LFSK  +I   Q+     L KA+K  L  LA  R   +DWK KE  D++F++L+P +V++
Sbjct: 413  LFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVRE 472

Query: 1460 QQEMWERVEKSIEDSVSGGRNRPGAKTSKSSAPKNLVESKGSGKLGAGPSSGSTS----Q 1627
            Q+ +WE +EK I D + GG  R     +K+S   ++    G+     G +  +      +
Sbjct: 473  QRRVWESLEKQITDIIHGGGRR--GPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRR 530

Query: 1628 NVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSID 1807
              M  E REA+ KAL+++F+  K CSFQ I   LRD+A+ ++   K      VAA +  D
Sbjct: 531  TAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGAD 590

Query: 1808 AFPNEFQAIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVEA 1987
            A   E  AIIS+ A  VHG+ V  +S ++ +++ +RKVV+DLF  + PNA+LK+A I+EA
Sbjct: 591  APQEELHAIISKYATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEA 649

Query: 1988 VNLQLKGEVVTDAAYKKVLHELCVSQGSGWVLRNDDSNLK 2107
              + LK E+ T   Y KV+ ELC S+GS WVL++ D   K
Sbjct: 650  AKIALKKEITTH-EYNKVVSELCESRGSLWVLKSGDGKPK 688


>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
            lycopersicum]
          Length = 669

 Score =  496 bits (1276), Expect = e-137
 Identities = 280/570 (49%), Positives = 361/570 (63%), Gaps = 6/570 (1%)
 Frame = +2

Query: 404  PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDASADP 583
            PS DP TQLY+FQYPL+ +WRPYEL+ERCQEVR++P++AE+EVDLAID++SKN+D  +  
Sbjct: 104  PSFDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVH 163

Query: 584  KLQMDKQTLALSW--KPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKRT 757
               + KQ L+ SW   P   +G  VGVL G+KLHLNP+HAV+QLRPS R+L   E KK  
Sbjct: 164  AATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNI 223

Query: 758  DVGNNDEDVMKLEEQQEGKSSGVSKKQ-KAPEPIKDSEEGWVPLKYHSVSSDMAAGYLQK 934
             + NNDE  ++ E+ +E +  G SKKQ K+P   KD  E W+ LKYH   SD++A YLQK
Sbjct: 224  -ITNNDEKSVENEDVKEKRPVGPSKKQNKSPGIEKDIGEHWLHLKYHGARSDISARYLQK 282

Query: 935  MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 1114
            M   EGS V FSMSP DYLN+ CPG   D+   K  LR  L   PL ER + WLLEGPP+
Sbjct: 283  MSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRLK-ILRTRLSQLPLEERVRIWLLEGPPI 341

Query: 1115 HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLLLFS 1288
            HRFD L +LAPD+S                GLWVP++SLVYG   G+  LARN+VL  F+
Sbjct: 342  HRFDALMHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFT 401

Query: 1289 KDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKKQQE 1468
            K ++IK     + P  +KA    L  LA  R  L DWKLKE PD  F  L   VV++QQ 
Sbjct: 402  KGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREQQA 461

Query: 1469 MWERVEKSIEDSVSGGRNRPGAKTSKSSAPKNLVESKGSGKLGAGPSSGSTSQNVMPEEV 1648
             WE + K I D + GGR RP  K      P N      +   G  P+S S  +  M EE+
Sbjct: 462  TWECLGKQINDVLPGGRTRPTMKN-----PINRNADITALPSGDKPTSSSLLRTSMSEEI 516

Query: 1649 REAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKG-PATETVAAVHSIDAFPNEF 1825
            REA+ KALQ++F++ K CSFQQI   LR + + ++   KG P     A+V   DA   E 
Sbjct: 517  REALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASVDVFDAPQEEI 576

Query: 1826 QAIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVEAVNLQLK 2005
            QA+I++VAVN+HG+ V  SS DN  YD +RK+VIDLF+AEGP+A+LKKA + EA  LQL 
Sbjct: 577  QAVINQVAVNIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAKLKKASVTEAAKLQLN 636

Query: 2006 GEVVTDAAYKKVLHELCVSQGSGWVLRNDD 2095
             + +T+  + KV+ ELC S+ S WVLR+ D
Sbjct: 637  RD-ITNVEFLKVMKELCHSEKSAWVLRSGD 665


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  491 bits (1265), Expect = e-136
 Identities = 270/575 (46%), Positives = 359/575 (62%), Gaps = 7/575 (1%)
 Frame = +2

Query: 404  PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDASADP 583
            P  D  T++Y+ QYPLRP WRPYEL ERC EVRVKP SAEVEVDL+IDV+SKNYD  A  
Sbjct: 113  PPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPN 172

Query: 584  KLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKRTDV 763
              +M KQTL+ SWKPP+  G  VGVL GNKLHLNPIHAV+QLRPSM +L+   +K++ +V
Sbjct: 173  AQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNV 232

Query: 764  GNNDEDVMKLEEQQEGKSSGVSKKQKAPEPIKDSEEGWVPLKYHSVSSDMAAGYLQKMVA 943
              +    +KLE   E +S G  KKQ            WVPLKYHS  SD +A YLQKMVA
Sbjct: 233  TGDTNSAVKLEVSNEEESVGSLKKQ-----------SWVPLKYHSSESDFSARYLQKMVA 281

Query: 944  REGSEVHFSMSPDDYLNSLC-PGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPLHR 1120
             + S + F MSP +Y+NSLC PG   D   SKG  RR LL+ PL ERFKT L EGPP+HR
Sbjct: 282  EDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHR 341

Query: 1121 FDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY--GDGIAALARNYVLLLFSKD 1294
            F  LK+ APD+S+               GLWVP++SL++  G G+A LAR+Y+LLLFSK 
Sbjct: 342  FSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKG 401

Query: 1295 VIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKKQQEMW 1474
             +I   Q+     L KA+K  L  LA  R   +DWK KE  D++F++L+P +V++Q+ +W
Sbjct: 402  PLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVW 461

Query: 1475 ERVEKSIEDSVSGGRNRPGAKTSKSSAPKNLVESKGSGKLGAGPSSGSTS----QNVMPE 1642
            E +EK I D + GG  R     +K+S   ++    G+     G +  +      +  M  
Sbjct: 462  ESLEKQITDIIHGGGRR--GPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSA 519

Query: 1643 EVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSIDAFPNE 1822
            E REA+ KAL+++F+  K CSFQ I   LRD+A+ ++   K      VAA +  DA   E
Sbjct: 520  ETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQEE 579

Query: 1823 FQAIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVEAVNLQL 2002
              AIIS+ A  VHG+ V  +S ++ +++ +RKVV+DLF  + PNA+LK+A I+EA  + L
Sbjct: 580  LHAIISKYATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIAL 638

Query: 2003 KGEVVTDAAYKKVLHELCVSQGSGWVLRNDDSNLK 2107
            K E+ T   Y KV+ ELC S+GS WVL++ D   K
Sbjct: 639  KKEITTH-EYNKVVSELCESRGSLWVLKSGDGKPK 672


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Solanum tuberosum]
          Length = 657

 Score =  491 bits (1263), Expect = e-136
 Identities = 278/569 (48%), Positives = 357/569 (62%), Gaps = 5/569 (0%)
 Frame = +2

Query: 404  PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDASADP 583
            PS DP TQLY+FQYPLR +WRPYEL+ERCQEVR++P++AE+EVDLAID++SKN+D  +  
Sbjct: 104  PSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVH 163

Query: 584  KLQMDKQTLALSWK--PPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKRT 757
               + KQ L+ SW   P  A+G  VGVL G+KLHLNP+HAV+QLRPS R+L   E KK  
Sbjct: 164  AATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNV 223

Query: 758  DVGNNDEDVMKLEEQQEGKSSGVSKKQKAPEPIKDSEEGWVPLKYHSVSSDMAAGYLQKM 937
               NNDE  ++ E+ +E +  G SKKQ            W+ LKYH   SD++A YLQKM
Sbjct: 224  TT-NNDEKSVENEDVKEKRPMGPSKKQH-----------WLHLKYHGARSDISARYLQKM 271

Query: 938  VAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPLH 1117
               EGS V FSMSP DYLN+  PG   D+   K  LR  L   PL ER +TWLLEGPP+H
Sbjct: 272  AMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLK-ILRTRLSQLPLEERVRTWLLEGPPIH 330

Query: 1118 RFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLLLFSK 1291
            RFD LK+LAPD+S                GLWVP++SLVYG   G+  LARN+VL  F+K
Sbjct: 331  RFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTK 390

Query: 1292 DVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKKQQEM 1471
             ++IK     + P  +KA    L  LA  R  L DWKLKE PD  F  L   VV+++Q  
Sbjct: 391  GILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQAT 450

Query: 1472 WERVEKSIEDSVSGGRNRPGAKTSKSSAPKNLVESKGSGKLGAGPSSGSTSQNVMPEEVR 1651
            WE + K I D + GGRNRP  K      P N      +   G  P+S S  +  M EE+R
Sbjct: 451  WECLGKQINDVLPGGRNRPTMKN-----PLNPNADIPALPSGDKPTSSSLLRTSMSEEIR 505

Query: 1652 EAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKG-PATETVAAVHSIDAFPNEFQ 1828
            EA+ KALQ++F++ K CSFQQI   LR + + ++   KG P     A++   DA   E Q
Sbjct: 506  EALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASIDVFDAPQEEIQ 565

Query: 1829 AIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVEAVNLQLKG 2008
            A+I++VAVN+HG+ V  SS DN  YD +RKVVIDLF+AEGP+A+LKKA + EA  LQL  
Sbjct: 566  AVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASVTEAAKLQLNR 625

Query: 2009 EVVTDAAYKKVLHELCVSQGSGWVLRNDD 2095
            + +T+  + KV+ ELC S+ S WVLR+ D
Sbjct: 626  D-ITNVEFLKVMKELCHSEKSAWVLRSGD 653


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC5-like [Citrus sinensis]
            gi|557527707|gb|ESR38957.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  476 bits (1226), Expect = e-131
 Identities = 261/574 (45%), Positives = 363/574 (63%), Gaps = 10/574 (1%)
 Frame = +2

Query: 395  YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDAS 574
            +F PS+D +++LY+ QYPLRPLWRPYELDERC+EVRVKP+++EVE+DL+IDV+S N+D+ 
Sbjct: 120  FFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSE 179

Query: 575  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKR 754
               +L M KQTL+ +W PP+A G  +GVL GNKLHLNPIHAV+QLR SM  L    SK++
Sbjct: 180  KASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKRK 239

Query: 755  TDVGNNDEDVMKLEEQQEGKSSGVSKKQK----APEPIKDSEEGWVPLKYHSVSSDMAAG 922
             +V +  E  +KLE+  + KS G SKKQ     + E   + EE WVPLKYH   SD +A 
Sbjct: 240  NNVAS--EIPVKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSKSDFSAR 297

Query: 923  YLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLE 1102
            YLQ+M+  E S +HF+M+P DY++SLCPG   ++  SKGP RR LL+ PL ERFK  L E
Sbjct: 298  YLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLCE 357

Query: 1103 GPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVLL 1279
            G P+ RF TL + AP+D++               GLW PR+ L++  D +  LAR+YVLL
Sbjct: 358  GEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDKMKCLARDYVLL 417

Query: 1280 LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1459
             FSK+ ++K + L  SP L   +K  L+  A  R   KDWK ++  DL+FI+ +P +V K
Sbjct: 418  SFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHPNIVIK 477

Query: 1460 QQEMWERVEKSIEDSVSGGRNRPGAKTSKSSAPKNLVESKGSGKLGA--GPSSGSTSQNV 1633
            Q+++W   EK I D ++  +      T ++ A K+ + +K    + +  GPS   T    
Sbjct: 478  QEQVWAAAEKQITDVIN--KLGKSGSTLRNDAGKSAMVNKHLKAINSSNGPSGALTGNKN 535

Query: 1634 MPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSIDAF 1813
            +  E REA+ KALQKLF+  K CS   I   LRD+A+ ++   K  A  TV A   +D+ 
Sbjct: 536  LSNESREALPKALQKLFQIHKVCSLPLIKQGLRDLAISQSTLPKADARMTVLAAEIVDSS 595

Query: 1814 ---PNEFQAIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVE 1984
                 EF  +IS+VA N+HG  V  SS D   +  +RKVV DL LA GP+A+LKKA +VE
Sbjct: 596  FVDTQEFAEVISQVATNIHGFYVSKSSED-PQHGPLRKVVTDLLLAGGPDAKLKKADVVE 654

Query: 1985 AVNLQLKGEVVTDAAYKKVLHELCVSQGSGWVLR 2086
            A    LK E +++A Y KV+ ++C S+GS W+L+
Sbjct: 655  AARHVLKRE-ISNAEYSKVMSDICESKGSAWILK 687


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
            gi|550334731|gb|EEE90658.2| hypothetical protein
            POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  461 bits (1186), Expect = e-127
 Identities = 261/582 (44%), Positives = 349/582 (59%), Gaps = 15/582 (2%)
 Frame = +2

Query: 395  YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDAS 574
            Y+ PSVDP TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVEVDL+ID ++KNYD  
Sbjct: 118  YYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSID-DTKNYDPD 176

Query: 575  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKR 754
               +L M KQTL+ SW PP A G  VGVL GNKLHLNPIHAV+QLRPSM +L+   SK +
Sbjct: 177  IASRLNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGK 236

Query: 755  TDVGNNDEDVMKLEEQQEGKSSGVSKKQKAP-----EPIKDSEEGWVPLKYHSVSSDMAA 919
             +  +        E+  EGK  G+ KKQ        E   D EE W+PLKYH   SD+++
Sbjct: 237  KNATSG-------EDSNEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSS 289

Query: 920  GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 1099
             YLQ MVA E S + F+M+P DY++SLCPG   +++   GP RR LL+ PL ER K   L
Sbjct: 290  RYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFL 349

Query: 1100 EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-----GDGIAALAR 1264
            EGPP+HRF  L++L P+DSI               GLWVP+TSL++      + +   AR
Sbjct: 350  EGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAAR 409

Query: 1265 NYVLLLFSKDVIIKDEQL--PKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRL 1438
            +Y+LLLFSK +++   +L  P  P ++K+  ++    A  R   KDWK KE  D  F+ L
Sbjct: 410  DYILLLFSKSLVVTPSELNVPMKPLILKSFLNI---FAVERPSFKDWKFKENVDTLFVEL 466

Query: 1439 NPAVVKKQQEMWERVEKSIEDSVSGGRNRPGAKTSKSSAPKNLVESKGSGKLGAGPSSGS 1618
             P +V+KQ++ WE + K+I    S   +R G   SK+   K                   
Sbjct: 467  YPDIVRKQEQAWEVMGKNI----SAAFDRAGKSVSKNVITK------------------- 503

Query: 1619 TSQNVMPEEVREAIKKALQKLFKSTKTC--SFQQIIPRLRDMALLETVRSKGPATETVAA 1792
              +  M +E REA++KAL K+ ++ K C   FQ I   LR +A+ ++   K      VAA
Sbjct: 504  -PKKTMTDETREALRKALPKVLQTHKVCRYGFQMICQGLRQLAISQSTLPKADPRIAVAA 562

Query: 1793 VHSIDAFPNEFQAIISEVAVNVHGICVPISSHDNKDYDNI-RKVVIDLFLAEGPNARLKK 1969
                +A P E Q +ISEVA N+HG  V  SS ++ D+D + RKVVI LFLA GPNA +KK
Sbjct: 563  ASGAEAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPLSRKVVIGLFLARGPNANIKK 622

Query: 1970 AHIVEAVNLQLKGEVVTDAAYKKVLHELCVSQGSGWVLRNDD 2095
            + +  A  L+LK E  +++ Y KV+ +LC S+GS WVL++ D
Sbjct: 623  SEVQAAARLELKRE-PSNSEYIKVMTDLCESKGSAWVLKSGD 663


>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
            gi|508699252|gb|EOX91148.1| SIN-like family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  461 bits (1185), Expect = e-127
 Identities = 262/578 (45%), Positives = 357/578 (61%), Gaps = 11/578 (1%)
 Frame = +2

Query: 395  YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDAS 574
            +F PS+D  TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVE+DLA+DV+S NYD+ 
Sbjct: 128  FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 187

Query: 575  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKR 754
               +L+M KQTL+ SW PP+  G  VGVL G+KLHLNPIHAV+QLRPSM HL    SK++
Sbjct: 188  RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 247

Query: 755  TDVGNNDEDVMKLEEQQEGKSSGVSKK-----QKAPEPIKDSEEGWVPLKYHSVSSDMAA 919
                 + E  +K+EE  +GK++G S K     Q + E   D +E WVPLKYHS  +D +A
Sbjct: 248  NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 307

Query: 920  GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 1099
             YLQ+M+A E   + F+MSP DY++SLCPG   ++  ++GP RR LL+ PL ER K  L 
Sbjct: 308  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 366

Query: 1100 EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVL 1276
            EGPP HRF  LK+ APD SI               GLWVP++SL++  D   +LAR+YVL
Sbjct: 367  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVL 426

Query: 1277 LLFSKDVIIKDEQL-PKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVV 1453
            LLFSK+ II   Q+   SP   + +K  L  LA  R   KDWKLKE  D  F +L P +V
Sbjct: 427  LLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 486

Query: 1454 KKQQEMWERVEKSIEDSVSGGRNRPGAKTSKSSA---PKNLVESKGSGKLGAGPSSGSTS 1624
            K Q+++W   E ++ + +  G     ++T   +     K +   KG  ++     +G T 
Sbjct: 487  KNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRT- 545

Query: 1625 QNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSI 1804
               M +E REAI KAL+K+F++ K CS Q I   LRD+AL ++   K  A   V A +  
Sbjct: 546  ---MSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAYGA 602

Query: 1805 DAFPNEFQAIISEVAVNVH-GICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIV 1981
            DA  +E Q ++SEVAV +H G+ V  SS ++ +YD +R+VVI+L   +G   +LKKA + 
Sbjct: 603  DAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVKG---KLKKADVS 659

Query: 1982 EAVNLQLKGEVVTDAAYKKVLHELCVSQGSGWVLRNDD 2095
             A  L LK E +++  Y KV+ + C  + S WVL++ D
Sbjct: 660  AAALLSLKRE-ISNNEYNKVMSDFCEYKSSWWVLKSGD 696


>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 666

 Score =  458 bits (1179), Expect = e-126
 Identities = 268/565 (47%), Positives = 346/565 (61%), Gaps = 16/565 (2%)
 Frame = +2

Query: 395  YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDAS 574
            YF PS+DP TQLY+ Q P+RP+WRPYEL+ERC+EVR++PT+A++EVDLAID +SKN+D  
Sbjct: 103  YFTPSLDPNTQLYVLQSPMRPVWRPYELEERCKEVRLRPTTAQMEVDLAIDFDSKNFDRD 162

Query: 575  ADPKLQMDKQTLALSW--KPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESK 748
            +    +M+KQT++ SW   P   +G  VGVL G+KLHLNPIH V+QLRPS +HL   E K
Sbjct: 163  SIYAEKMEKQTVSTSWIPVPTGTSGYAVGVLIGDKLHLNPIHTVVQLRPSKQHLKESELK 222

Query: 749  KRTDVGNNDEDVMKLEEQQEGKSSGVSKKQ-KAPEPIKDSEEGWVPLKYHSVSSDMAAGY 925
            K     +NDE  ++ EE +E K    SKKQ K P   KD EE WV LKYH   S+++A Y
Sbjct: 223  KNI-ATSNDEKTVENEEIKENKPVAPSKKQNKPPGNDKDIEEHWVHLKYHGARSEISARY 281

Query: 926  LQKMVAREGSEVHFSMS----------PDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLN 1075
            LQ+M   EGS + FSMS            DYL +LCPG   D+   K  LR  +   PL+
Sbjct: 282  LQRMAMEEGSPIPFSMSLAFFSVNLIHRVDYLRTLCPGRPNDTDKYK-DLRIRVSQLPLD 340

Query: 1076 ERFKTWLLEGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGI 1249
            ERF+TWL EGPP+HRF  LK+LA D+ +               GLWVP++SLVYG  DG 
Sbjct: 341  ERFRTWLHEGPPIHRFGALKHLALDNPVEEILEVLQRYAQVVQGLWVPKSSLVYGRNDGH 400

Query: 1250 AALARNYVLLLFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNF 1429
              LAR++VL  FSK   IK     + P   KA    L  LA  R  L DWKLKE PD  F
Sbjct: 401  EVLARDFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPDLNDWKLKEHPDKEF 460

Query: 1430 IRLNPAVVKKQQEMWERVEKSIEDSVSGGRNRPGAKTSKSSAPKNLVESKGSGKLGAGPS 1609
              L   +VK+QQ  WER+ K I   ++GGRNRP  K      P N      +   G  P+
Sbjct: 461  ENLYGDLVKEQQVTWERLGKQIYGLLAGGRNRPTMKN-----PSNPSAGIPALPSGGKPT 515

Query: 1610 SGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVA 1789
              S ++  M E  REA++KALQK+F++ K CSFQQI  RLR+ A+ E  R KG A   VA
Sbjct: 516  PRSVTRTSMSERTREALQKALQKVFRTHKVCSFQQIRLRLREAAVSENDRPKGNAKGAVA 575

Query: 1790 AVHSI-DAFPNEFQAIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLK 1966
            A   + DA P E QA+I +VA N+HG  V  SS DN  YD +RKVV++L + EGP+A+LK
Sbjct: 576  AASFVDDAPPEELQAVIDQVAFNIHGDYVLKSSPDNPQYDALRKVVVELLIGEGPSAKLK 635

Query: 1967 KAHIVEAVNLQLKGEVVTDAAYKKV 2041
            KA I++A   +L  + +  A ++KV
Sbjct: 636  KATIMKAAKSELNRD-IPPAEFQKV 659


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  456 bits (1172), Expect = e-125
 Identities = 257/557 (46%), Positives = 338/557 (60%), Gaps = 8/557 (1%)
 Frame = +2

Query: 395  YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDAS 574
            +F PS+D  TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVEVDL ID +S N+D +
Sbjct: 124  FFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTID-DSSNWDPA 182

Query: 575  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKR 754
               K    KQTL+ S+ PP+  G  VGVL GNKLHLNPIHAV+QLRPS+ H+   +SK++
Sbjct: 183  QASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRK 242

Query: 755  TDVGNNDEDVMKLEEQQEGKSSGVSKKQKAPEPIKDSEEGWVPLKYHSVSSDMAAGYLQK 934
                 N E  +KLE+  EGK  G SKKQ            W+ LKYH   SD ++ YL+K
Sbjct: 243  NSATLNPE--VKLEDSNEGKPIGSSKKQC-----------WISLKYHGSKSDFSSRYLEK 289

Query: 935  MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 1114
            M+A+E S + F+M+P DY++SLCP    +   SKGP RR LL+ PL ER K  +LEGPP+
Sbjct: 290  MIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPV 349

Query: 1115 HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYGDGIAALA-RNYVLLLFSK 1291
             RF  LK+ APDDS+               GLW P++SL++ D  +    R+YVLLLFSK
Sbjct: 350  QRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLFPDANSKQGIRDYVLLLFSK 409

Query: 1292 DVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKKQQEM 1471
            +++I   Q+     + + +K  L+  A  R   KDWK KE  D  FI+L P +VKKQ+E 
Sbjct: 410  NLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEA 469

Query: 1472 WERVEKSIEDSVSGGRNRPGAKTSKSSAPK-----NLVESKGSGKLGAGPSSG--STSQN 1630
            W+  EK +    S   +R G  + K++ PK     N V+   S K     +SG    ++ 
Sbjct: 470  WDNTEKRL----SKVFDRSGKASMKNAIPKPPMVHNTVKHLDSEKSMPKIASGMRRLTKT 525

Query: 1631 VMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSIDA 1810
             +  E REA+ KAL K+F+S K CSFQ I   LRD+A+ ++   K      VAA    DA
Sbjct: 526  TITVETREALLKALPKVFQSHKVCSFQLICQGLRDLAVSQSTLPKADPRIAVAAASGADA 585

Query: 1811 FPNEFQAIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVEAV 1990
             P E Q IIS+VA N+HG  V  SS ++  YD +RKV+IDL LA GPNA+LKKA + EA 
Sbjct: 586  PPEELQEIISQVATNIHGFYVLKSSPEHPQYDELRKVIIDLLLARGPNAKLKKAEVFEAA 645

Query: 1991 NLQLKGEVVTDAAYKKV 2041
             L  K + VT+  Y K+
Sbjct: 646  RLAFKRD-VTNIEYNKL 661


>ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252245 [Solanum
            lycopersicum]
          Length = 659

 Score =  448 bits (1153), Expect = e-123
 Identities = 256/564 (45%), Positives = 339/564 (60%), Gaps = 5/564 (0%)
 Frame = +2

Query: 425  QLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDASADPKLQMDKQ 604
            + Y+ QYPLR  WRPY LDERCQ+VR++P+SAE+EVDLAID +SKN+D  +     + KQ
Sbjct: 112  EFYVLQYPLRSEWRPYGLDERCQDVRLRPSSAEMEVDLAIDFDSKNFDRDSVHAATIKKQ 171

Query: 605  TLALSWKPPKANG-CTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKRTDVGNNDED 781
             ++  W P        VG+  G+K HLNP+HA++QLRPS++H   KES+ +    +NDE 
Sbjct: 172  IVSTKWVPSSTCADFAVGIFIGDKFHLNPVHAIVQLRPSLQHR--KESELKNLTTSNDEK 229

Query: 782  VMKLEEQQEGKSSGVSKKQ-KAPEPIKDSEEGWVPLKYHSVSSDMAAGYLQKMVAREGSE 958
              + E+ +E K  G+SKKQ K P   KD  E W+ LKYH   SD++A +LQKM    GS 
Sbjct: 230  SCENEDVKEKKPVGLSKKQNKLPGNYKDIGEHWLHLKYHGTRSDISARHLQKMAMEGGSP 289

Query: 959  VHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPLHRFDTLKY 1138
            V FSM P DYLN++CP    D +     LR  L  KP  ER +TWLLEGPP+HRFDTLK+
Sbjct: 290  VPFSMIPSDYLNAICPARPTD-IDRLRNLRTRLSQKPFEERVRTWLLEGPPIHRFDTLKH 348

Query: 1139 LAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY--GDGIAALARNYVLLLFSKDVIIKDE 1312
            LAPD+ +               GLWV ++SLVY   +G+  LARN+VL  F+K  +IK  
Sbjct: 349  LAPDNPVDEILEVLKSCAQLVQGLWVAKSSLVYDTNNGVEVLARNFVLYEFTKSTLIKKS 408

Query: 1313 QLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKS 1492
               + P  +KA   VL  LA  R  L DWKLKELPD  F  L   VV++Q+ +WE + K 
Sbjct: 409  VFGRRPEFLKAATPVLKSLAVERPDLDDWKLKELPDKKFENLYGDVVREQEAIWESMGKQ 468

Query: 1493 IEDSVSGGRNRPGAKTSKSSAPK-NLVESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKA 1669
            I D + GGRNRP  K   +  PK N+     S K    P+  +  +  + EE+R A+ KA
Sbjct: 469  INDIMHGGRNRPTLKNPLN--PKANIPALSSSDK----PTPTTFLRTSLSEEIRGALPKA 522

Query: 1670 LQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSIDAFPNEFQAIISEVA 1849
            LQ +F+  K CS  QI          E +  + P    ++     DA   E +A+++++A
Sbjct: 523  LQNVFRIHKVCSLLQI---------CELMEKEDPMKAIISPAGISDALRKEIEAVVNQIA 573

Query: 1850 VNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVEAVNLQLKGEVVTDAA 2029
            VN+HG+ V  SS DN  YD +RKVVIDLF+AEG NA+LKKA IVEA  LQL G  VT   
Sbjct: 574  VNIHGVYVLKSSPDNPQYDALRKVVIDLFMAEGSNAKLKKASIVEAAKLQL-GRDVTTVE 632

Query: 2030 YKKVLHELCVSQGSGWVLRNDDSN 2101
            ++KV+ ELC S+ S WVL   DSN
Sbjct: 633  FQKVMKELCRSENSAWVLGISDSN 656


>ref|XP_007046992.1| Transcription regulators,zinc ion binding, putative isoform 2
            [Theobroma cacao] gi|508699253|gb|EOX91149.1|
            Transcription regulators,zinc ion binding, putative
            isoform 2 [Theobroma cacao]
          Length = 588

 Score =  447 bits (1150), Expect = e-123
 Identities = 256/567 (45%), Positives = 349/567 (61%), Gaps = 11/567 (1%)
 Frame = +2

Query: 395  YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDAS 574
            +F PS+D  TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVE+DLA+DV+S NYD+ 
Sbjct: 31   FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 90

Query: 575  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKR 754
               +L+M KQTL+ SW PP+  G  VGVL G+KLHLNPIHAV+QLRPSM HL    SK++
Sbjct: 91   RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 150

Query: 755  TDVGNNDEDVMKLEEQQEGKSSGVSKK-----QKAPEPIKDSEEGWVPLKYHSVSSDMAA 919
                 + E  +K+EE  +GK++G S K     Q + E   D +E WVPLKYHS  +D +A
Sbjct: 151  NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 210

Query: 920  GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 1099
             YLQ+M+A E   + F+MSP DY++SLCPG   ++  ++GP RR LL+ PL ER K  L 
Sbjct: 211  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 269

Query: 1100 EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVL 1276
            EGPP HRF  LK+ APD SI               GLWVP++SL++  D   +LAR+YVL
Sbjct: 270  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVL 329

Query: 1277 LLFSKDVIIKDEQL-PKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVV 1453
            LLFSK+ II   Q+   SP   + +K  L  LA  R   KDWKLKE  D  F +L P +V
Sbjct: 330  LLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 389

Query: 1454 KKQQEMWERVEKSIEDSVSGGRNRPGAKTSKSSA---PKNLVESKGSGKLGAGPSSGSTS 1624
            K Q+++W   E ++ + +  G     ++T   +     K +   KG  ++     +G T 
Sbjct: 390  KNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRT- 448

Query: 1625 QNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSI 1804
               M +E REAI KAL+K+F++ K CS Q I   LRD+AL ++   K  A   V A +  
Sbjct: 449  ---MSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAYGA 505

Query: 1805 DAFPNEFQAIISEVAVNVH-GICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIV 1981
            DA  +E Q ++SEVAV +H G+ V  SS ++ +YD +R+VVI+L   +G   +LKKA + 
Sbjct: 506  DAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVKG---KLKKADVS 562

Query: 1982 EAVNLQLKGEVVTDAAYKKVLHELCVS 2062
             A  L LK E +++  Y K L  + ++
Sbjct: 563  AAALLSLKRE-ISNNEYNKALRNMDIA 588


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
            sativus]
          Length = 702

 Score =  446 bits (1146), Expect = e-122
 Identities = 250/578 (43%), Positives = 337/578 (58%), Gaps = 10/578 (1%)
 Frame = +2

Query: 398  FAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDASA 577
            F PSVD  ++LY+ QYPLRP WRPYE + RC EVRVKP++ EVEVDL +D+ S NYD  A
Sbjct: 128  FTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIESNNYDNKA 187

Query: 578  DPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKRT 757
            D   QM KQTL  SW+PP A    VG+L GNKLHLNP+HAV+QLRPS  HL     K++ 
Sbjct: 188  DGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNSGGPKRKN 247

Query: 758  DVGNNDEDVMKLEEQQEGKSSGVSKKQK-----APEPIKDSEEGWVPLKYHSVSSDMAAG 922
            +V   D DV K EE  +  S+G S+KQK     + E     EE W+PLKY+ + SD++  
Sbjct: 248  NV-RADSDV-KSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLESDLSTR 305

Query: 923  YLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLE 1102
            +LQ MV++  S + FSMSP DY++SLCPGT       KGP ++ LL+  L ER K  L E
Sbjct: 306  HLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIKKLLTE 365

Query: 1103 GPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRT-SLVYGDGIAALARNYVLL 1279
            GPP+ RF  LK+ APD                  GLWVP++  L+  DG    AR++VL 
Sbjct: 366  GPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCARDFVLF 425

Query: 1280 LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1459
            LFSK+ ++   Q+     L   +K  L+     R   KDWK KE  D  F+  +  + +K
Sbjct: 426  LFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHVRIAEK 485

Query: 1460 QQEMWERVEKSIE--DSVSGGRNRPGAKTSKSSAPKNLVESKGSGKLGAGPSSGS--TSQ 1627
            Q+E+W  VEK      S+    +   A       PK  +E + S       SS +    +
Sbjct: 486  QEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPK--LEKQVSSDQTTTKSSNAPLNRK 543

Query: 1628 NVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSID 1807
              M +E REA+ KALQKLF++ K CSFQ I   LRD+A+ ++   K  A   VAA + +D
Sbjct: 544  GAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGVD 603

Query: 1808 AFPNEFQAIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVEA 1987
            A P+E + IIS+VA  +HG+ V  SS ++ +YD +RKVVI L    GP A LKKA ++EA
Sbjct: 604  APPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEA 663

Query: 1988 VNLQLKGEVVTDAAYKKVLHELCVSQGSGWVLRNDDSN 2101
               +L G  +    Y KV++E+C+S GS W L++ D N
Sbjct: 664  SKHEL-GRAINSNEYSKVMNEICISHGSSWTLKSGDGN 700


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  445 bits (1144), Expect = e-122
 Identities = 250/578 (43%), Positives = 336/578 (58%), Gaps = 10/578 (1%)
 Frame = +2

Query: 398  FAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDASA 577
            F PSVD  ++LY+ QYPLRP WRPYE + RC EVRVKP++ EVEVDL +D+ S NYD  A
Sbjct: 128  FTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIESNNYDNKA 187

Query: 578  DPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKRT 757
            D   QM KQTL  SW+PP A    VG+L GNKLHLNP+HAV+QLRPS  HL     K++ 
Sbjct: 188  DGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNSGGPKRKN 247

Query: 758  DVGNNDEDVMKLEEQQEGKSSGVSKKQK-----APEPIKDSEEGWVPLKYHSVSSDMAAG 922
            +V   D DV K EE  +  S+G S+KQK     + E     EE W+PLKY+ + SD++  
Sbjct: 248  NV-RADSDV-KSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLESDLSTR 305

Query: 923  YLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLE 1102
            +LQ MV++  S + FSMSP DY++SLCPGT       KGP ++ LL+  L ER K  L E
Sbjct: 306  HLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIKKLLTE 365

Query: 1103 GPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRT-SLVYGDGIAALARNYVLL 1279
            GPP+ RF  LK+ APD                  GLWVP++  L+  DG    AR++VL 
Sbjct: 366  GPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCARDFVLF 425

Query: 1280 LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1459
            LFSK+ ++   Q+     L   +K  L+     R   KDWK KE  D  F+  +  + +K
Sbjct: 426  LFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHVRIAEK 485

Query: 1460 QQEMWERVEKSIE--DSVSGGRNRPGAKTSKSSAPKNLVESKGSGKLGAGPSSGS--TSQ 1627
            Q+E+W  VEK      S+    +   A       PK  +E + S       SS +    +
Sbjct: 486  QEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPK--LEKQVSSDQTTTKSSNAPLNRK 543

Query: 1628 NVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSID 1807
              M +E REA+ KALQKLF++ K CSFQ I   LRD+A+ ++   K  A   VAA + +D
Sbjct: 544  GAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGVD 603

Query: 1808 AFPNEFQAIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVEA 1987
            A P+E   IIS+VA  +HG+ V  SS ++ +YD +RKVVI L    GP A LKKA ++EA
Sbjct: 604  APPDELXKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEA 663

Query: 1988 VNLQLKGEVVTDAAYKKVLHELCVSQGSGWVLRNDDSN 2101
               +L G  +    Y KV++E+C+S GS W L++ D N
Sbjct: 664  SKHEL-GRAINSNEYSKVMNEICISHGSSWTLKSGDGN 700


>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao] gi|508699254|gb|EOX91150.1|
            Transcription regulators,zinc ion binding, putative
            isoform 3 [Theobroma cacao]
          Length = 736

 Score =  443 bits (1140), Expect = e-121
 Identities = 259/611 (42%), Positives = 356/611 (58%), Gaps = 44/611 (7%)
 Frame = +2

Query: 395  YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDAS 574
            +F PS+D  TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVE+DLA+DV+S NYD+ 
Sbjct: 128  FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 187

Query: 575  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKR 754
               +L+M KQTL+ SW PP+  G  VGVL G+KLHLNPIHAV+QLRPSM HL    SK++
Sbjct: 188  RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 247

Query: 755  TDVGNNDEDVMKLEEQQEGKSSGVSKK-----QKAPEPIKDSEEGWVPLKYHSVSSDMAA 919
                 + E  +K+EE  +GK++G S K     Q + E   D +E WVPLKYHS  +D +A
Sbjct: 248  NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 307

Query: 920  GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 1099
             YLQ+M+A E   + F+MSP DY++SLCPG   ++  ++GP RR LL+ PL ER K  L 
Sbjct: 308  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 366

Query: 1100 EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVL 1276
            EGPP HRF  LK+ APD SI               GLWVP++SL++  D   +LAR+YVL
Sbjct: 367  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVL 426

Query: 1277 LLFSKDVIIKDEQL-PKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVV 1453
            LLFSK+ II   Q+   SP   + +K  L  LA  R   KDWKLKE  D  F +L P +V
Sbjct: 427  LLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 486

Query: 1454 KKQQEMWERVEKSIEDSVSGGRNRPGAKTSKSSA---PKNLVESKGSGKLGAGPSSGSTS 1624
            K Q+++W   E ++ + +  G     ++T   +     K +   KG  ++     +G T 
Sbjct: 487  KNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRT- 545

Query: 1625 QNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSI 1804
               M +E REAI KAL+K+F++ K CS Q I   LRD+AL ++   K  A   V A +  
Sbjct: 546  ---MSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAYGA 602

Query: 1805 DAFPNEFQAIISEVAVNVH-GICVPISSHDNKDYDNIR-------------KVVIDLFLA 1942
            DA  +E Q ++SEVAV +H G+ V  SS ++ +YD +R               ++ +F  
Sbjct: 603  DAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLRLHKYVQLVFKWEEMFMVSMFFL 662

Query: 1943 EGPN--------------------ARLKKAHIVEAVNLQLKGEVVTDAAYKKVLHELCVS 2062
            + P+                     +LKKA +  A  L LK E +++  Y KV+ + C  
Sbjct: 663  QNPSFSSELFFPCREVVINLLRVKGKLKKADVSAAALLSLKRE-ISNNEYNKVMSDFCEY 721

Query: 2063 QGSGWVLRNDD 2095
            + S WVL++ D
Sbjct: 722  KSSWWVLKSGD 732


>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
            gi|358344405|ref|XP_003636280.1| DNA-directed RNA
            polymerase III subunit RPC5 [Medicago truncatula]
            gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
            III subunit RPC5 [Medicago truncatula]
            gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
            III subunit RPC5 [Medicago truncatula]
          Length = 683

 Score =  432 bits (1110), Expect = e-118
 Identities = 241/578 (41%), Positives = 349/578 (60%), Gaps = 9/578 (1%)
 Frame = +2

Query: 395  YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDAS 574
            YF+PS+D +T+LY+ QYPLRP WRPY+LDE+C+EVR+KP ++EVEVDL+ID+ S N + +
Sbjct: 115  YFSPSIDNDTKLYVMQYPLRPSWRPYDLDEQCEEVRLKPGTSEVEVDLSIDLESYNVEKA 174

Query: 575  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKR 754
               KL+  KQTL+ +WKPP ANGC VG+L G+KLHL+PIHAV+QLRPS  +L    S+K+
Sbjct: 175  TADKLKYTKQTLSTTWKPPPANGCAVGLLMGDKLHLHPIHAVVQLRPSRHYLDSGGSEKK 234

Query: 755  TDVGNNDEDVMKLEEQQEGKSSGVSKKQKAPEPIKDSEEGWVPLKYHSVSSDMAAGYLQK 934
                +N+++       ++      S +QK+     DS + WVPL+YH   SD+++ Y Q+
Sbjct: 235  NVATSNNQNKQTTPSMEQKSDGAPSIEQKS-----DSNQCWVPLEYHGCKSDISSRYFQQ 289

Query: 935  MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 1114
            MV  E S ++F MS  DY+ +LCPG   ++L +KGP +R LL+ P+ +R +T L+EGPPL
Sbjct: 290  MVTHESSPINFEMSTYDYIATLCPGVSSNTL-AKGPSKRYLLSLPVEKRLQTLLIEGPPL 348

Query: 1115 HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVLLLFSK 1291
            HRF  +K+ AP+ S                G WVPR+SL++   GI +LARNY+L+ F K
Sbjct: 349  HRFSAIKHFAPECSDDELLSVLEKQAQLLRGYWVPRSSLLFPTGGIESLARNYILVRFHK 408

Query: 1292 DVIIKDEQLPK--SPPLVKAMKDVLHGLATYRNKLKD----WKLKELPDLNFIRLNPAVV 1453
             + +K ++L +     L   MK  +   A  +  LK     WK KELPD +FI+  P VV
Sbjct: 409  SLTVKSDELRRLGGGELGNRMKHFVMQFALEKFDLKSKENYWKFKELPDESFIKEFPIVV 468

Query: 1454 KKQQEMWERVEKSIEDSVS--GGRNRPGAKTSKSSAPKNLVESKGSGKLGAGPSSGSTSQ 1627
            KKQ+E+++ +E  +   +   GG+ +  +  + S     L  S  S              
Sbjct: 469  KKQEEIFKILENEVNSIIGTLGGKRKLKSAITNSGVNNALFTSTNSDPRATSLGEDPPRS 528

Query: 1628 NVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSID 1807
              M  E R A+  AL+KLF++ K CSFQ I   LR +AL +T+  KG +  +V A +S+D
Sbjct: 529  MTMSSETRHALPIALKKLFQTHKVCSFQLICQELRGLALAQTMLPKGGSKMSVDAANSLD 588

Query: 1808 AFPNEFQAIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVEA 1987
               +E +AI+ EVA ++HG C  + S  N   D  R VVID+    GPN +LKKA I+EA
Sbjct: 589  VPQDELKAILGEVACDIHG-CYVLKSAQN---DPFRDVVIDMLRGSGPNGKLKKAEILEA 644

Query: 1988 VNLQLKGEVVTDAAYKKVLHELCVSQGSGWVLRNDDSN 2101
               +L G  V +  Y K + ELCVS+GS WVL++ D +
Sbjct: 645  ARRKL-GRDVPNNEYIKAVSELCVSKGSFWVLKSGDGS 681


>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Glycine
            max]
          Length = 697

 Score =  424 bits (1089), Expect = e-115
 Identities = 247/591 (41%), Positives = 352/591 (59%), Gaps = 22/591 (3%)
 Frame = +2

Query: 395  YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDAS 574
            +F+PSVD +TQLY+FQYPLRP WRPY+LDE+C+EVR+K  ++EVE+DL+ID++S + D  
Sbjct: 117  FFSPSVDAQTQLYVFQYPLRPSWRPYDLDEQCEEVRLKTKTSEVEIDLSIDLDSDHIDKE 176

Query: 575  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKR 754
               K  + KQTL+ +WKP  ANGC VG+L G+KLHL+P+HAV+QLRP+++HL    SK++
Sbjct: 177  FATKYNITKQTLSTTWKPSHANGCAVGLLMGDKLHLHPVHAVVQLRPTLQHLNSGGSKRK 236

Query: 755  TDVGNNDEDVMKLEEQQEGKSSGVSKKQKAP------EPIKDSEEGWVPLKYHSVSSDMA 916
                      +K+E   E KS   SKKQ         E   D +E WVPLKYHS  SD++
Sbjct: 237  NAASTGANATVKIEGSNEEKSVATSKKQNKQTGPSIIEQKSDGDECWVPLKYHSCKSDIS 296

Query: 917  AGYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWL 1096
            + YLQ+MV +E S ++F+M   DY+ +LCPG   ++L  KG  +R LL+ P+ ER K  +
Sbjct: 297  SRYLQQMVTQESSPINFTMRAYDYVTALCPGGSSNNL-PKGLSKRYLLSLPVEERLKK-M 354

Query: 1097 LEGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYGD-GIAALARNYV 1273
            LE  PLHRF  +K+ AP+ S                GLW  ++SL+Y D G+  LAR+Y 
Sbjct: 355  LEDRPLHRFSAIKHFAPEYSENELLGFLQQHAILVWGLWTAKSSLLYPDGGVETLARDYS 414

Query: 1274 LLLFSKDVIIKDEQLP-KSPPLVKAMKDVLHGLATYRNKLKD--------WKLKELPDLN 1426
            LLLFSK + ++   +  +   LV  +++ L      RN L          WK +ELPD +
Sbjct: 415  LLLFSKSLKVQFSDVSIRGGELVNRVRNCLKIFGVERNDLDKSTGKPNPYWKFRELPDES 474

Query: 1427 FIRLNPAVVKKQQEMWERVEKSIEDSVSG------GRNRPGAKTSKSSAPKNLVESKGSG 1588
            F +L P +V+KQ+E+++ +EK +    S       G+N    +   +   K+    +   
Sbjct: 475  FKKLYPDIVEKQEELFKGLEKQLSGFSSNVGKRKIGKNAVANQGVNTEVHKSESSDQRVT 534

Query: 1589 KLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKG 1768
             LG  P +  T  N    E R A+  AL+KLF++ K CSF+ I   LR+MA+ + + SKG
Sbjct: 535  SLGRVPPAKMTMSN----ETRHALPIALKKLFQTHKVCSFKLICEGLREMAVSKAMLSKG 590

Query: 1769 PATETVAAVHSIDAFPNEFQAIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEG 1948
             +   V A HS+D   NE  A+ISEVA  ++G  V  SS D    D  R VVID+    G
Sbjct: 591  DSKMAVDAAHSLDGPHNELMAVISEVACEINGSYVLKSSPD----DPFRDVVIDMLCGSG 646

Query: 1949 PNARLKKAHIVEAVNLQLKGEVVTDAAYKKVLHELCVSQGSGWVLRNDDSN 2101
            PNA+LKKA I+EA   +L  EV ++  Y KV+ ELCVS+GS WVL++ D +
Sbjct: 647  PNAKLKKAEILEAARRKLGREVASN-EYTKVMSELCVSKGSVWVLKSGDGS 696


>gb|ABU45208.1| unknown [Solanum bulbocastanum]
          Length = 654

 Score =  424 bits (1089), Expect = e-115
 Identities = 248/553 (44%), Positives = 329/553 (59%), Gaps = 14/553 (2%)
 Frame = +2

Query: 425  QLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDASADPKLQMDKQ 604
            + Y+ QYPLR  WRPY LDE+CQ+VR++P++AE+EVDLAID +SKN+D  +     + KQ
Sbjct: 112  EFYVLQYPLRSEWRPYGLDEKCQDVRLRPSTAEMEVDLAIDFDSKNFDRDSVHAATIKKQ 171

Query: 605  TLALSWKP-PKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKRTDVGNNDED 781
             ++  W P        VG+L G+KLHLNP+HAV+QLRPS++H   KES+ +    +NDE 
Sbjct: 172  IVSTKWVPLSTCADFAVGILIGDKLHLNPVHAVVQLRPSLQHR--KESELKNLTTSNDEK 229

Query: 782  VMKLEEQQEGKSSGVSKKQ-KAPEPIKDSEEGWVPLKYHSVSSDMAAGYLQKMVAREGSE 958
              + E+ +E K  G SKKQ K P   KD  E W+ LKYH   SD++A +LQKM    GS 
Sbjct: 230  TCENEDVKEKKPVGPSKKQNKPPGNYKDIGEHWLHLKYHGTRSDISARHLQKMAIEGGSP 289

Query: 959  VHFSMSP---------DDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPP 1111
            V FSM P          DYLN++CP    D +     LR  L  KP  ER +TWLL+GPP
Sbjct: 290  VPFSMIPFFRANLMHRGDYLNAICPARPTD-IDRLRNLRTRLSQKPFEERVRTWLLQGPP 348

Query: 1112 LHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY--GDGIAALARNYVLLLF 1285
            +HRFD LK+LAPD+ +               GLWVP++SLVY   +G+  LARN+VL  F
Sbjct: 349  IHRFDALKHLAPDNPVDEILEVLKSCAQLVQGLWVPKSSLVYDTNNGVEVLARNFVLYEF 408

Query: 1286 SKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKKQQ 1465
            +K+ +IK     + P  +KA   VL  LA  R  L DWKLKELPD  F  L   VV++QQ
Sbjct: 409  TKNTLIKKSVFGRRPEFLKAATPVLKSLAVERPDLDDWKLKELPDKKFENLYGDVVREQQ 468

Query: 1466 EMWERVEKSIEDSVSGGRNRPGAKTSKSSAPK-NLVESKGSGKLGAGPSSGSTSQNVMPE 1642
             +W+ + K I D + GGRNRP   T K+  PK NL     S K    P+  +  +  M E
Sbjct: 469  AIWDSMGKQINDILHGGRNRP---TMKNPLPKANLPALSSSDK----PTPTTFLRTSMSE 521

Query: 1643 EVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSIDAFPNE 1822
            E+R A+ KALQ +F+  K CS  QI          E +  + P    +A     DA   E
Sbjct: 522  EIRGALPKALQNIFRIHKVCSLLQI---------CEMMEKEDPKKAIIAPTGVSDALRKE 572

Query: 1823 FQAIISEVAVNVHGICVPISSHDNKDYDNIRKVVIDLFLAEGPNARLKKAHIVEAVNLQL 2002
             +A+++++AVN+HG+ V  SS DN  YD +RKVVIDLF+AEG +A+LKKA IVEA  LQL
Sbjct: 573  IEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVVIDLFMAEGSSAKLKKASIVEAAKLQL 632

Query: 2003 KGEVVTDAAYKKV 2041
             G  VT   ++KV
Sbjct: 633  -GRDVTTVEFQKV 644


>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|557527706|gb|ESR38956.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 637

 Score =  422 bits (1086), Expect = e-115
 Identities = 230/509 (45%), Positives = 318/509 (62%), Gaps = 10/509 (1%)
 Frame = +2

Query: 395  YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVNSKNYDAS 574
            +F PS+D +++LY+ QYPLRPLWRPYELDERC+EVRVKP+++EVE+DL+IDV+S N+D+ 
Sbjct: 120  FFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSE 179

Query: 575  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVIQLRPSMRHLALKESKKR 754
               +L M KQTL+ +W PP+A G  +GVL GNKLHLNPIHAV+QLR SM  L    SK++
Sbjct: 180  KASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKRK 239

Query: 755  TDVGNNDEDVMKLEEQQEGKSSGVSKKQK----APEPIKDSEEGWVPLKYHSVSSDMAAG 922
             +V +  E  +KLE+  + KS G SKKQ     + E   + EE WVPLKYH   SD +A 
Sbjct: 240  NNVAS--EIPVKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSKSDFSAR 297

Query: 923  YLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLE 1102
            YLQ+M+  E S +HF+M+P DY++SLCPG   ++  SKGP RR LL+ PL ERFK  L E
Sbjct: 298  YLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLCE 357

Query: 1103 GPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVLL 1279
            G P+ RF TL + AP+D++               GLW PR+ L++  D +  LAR+YVLL
Sbjct: 358  GEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDKMKCLARDYVLL 417

Query: 1280 LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1459
             FSK+ ++K + L  SP L   +K  L+  A  R   KDWK ++  DL+FI+ +P +V K
Sbjct: 418  SFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHPNIVIK 477

Query: 1460 QQEMWERVEKSIEDSVSGGRNRPGAKTSKSSAPKNLVESKGSGKLGA--GPSSGSTSQNV 1633
            Q+++W   EK I D ++  +      T ++ A K+ + +K    + +  GPS   T    
Sbjct: 478  QEQVWAAAEKQITDVIN--KLGKSGSTLRNDAGKSAMVNKHLKAINSSNGPSGALTGNKN 535

Query: 1634 MPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRDMALLETVRSKGPATETVAAVHSIDAF 1813
            +  E REA+ KALQKLF+  K CS   I   LRD+A+ ++   K  A  TV A   +D+ 
Sbjct: 536  LSNESREALPKALQKLFQIHKVCSLPLIKQGLRDLAISQSTLPKADARMTVLAAEIVDSS 595

Query: 1814 ---PNEFQAIISEVAVNVHGICVPISSHD 1891
                 EF  +IS+VA N+HG  V  SS D
Sbjct: 596  FVDTQEFAEVISQVATNIHGFYVSKSSED 624