BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00015782
         (719 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     269   2e-80
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   275   2e-79
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   275   2e-79
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]   271   2e-79
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]   268   3e-79
emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]   279   2e-78
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  267   3e-78
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]        266   7e-78
dbj|BAH80072.1| putative unclassified retrotransposon protein [O...   265   1e-77
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   265   1e-77
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]        264   2e-77
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]        267   2e-77
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]                264   2e-77
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]        264   2e-77
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-...   267   2e-77
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...   267   2e-77
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   271   4e-77
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  265   7e-77
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc...   261   9e-77
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   261   2e-76

>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  269 bits (688), Expect(3) = 2e-80
 Identities = 126/188 (67%), Positives = 151/188 (80%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++LRS + Q+RM  GDEWKT FKTK GLYEWLVMPFGLTNAPSTFMRLMNHVLR  IG
Sbjct: 808  SKIDLRSGFHQIRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIG 867

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K+VVVYFDDILIYS  + EHV H++ V ++LR  +LYANL KC+FC D+V+F GFVVS  
Sbjct: 868  KFVVVYFDDILIYSKTLEEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGL 927

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD +KV+AI++WPTP++ S V+SF GLAGFYRRFVR FS+IAAPL EL++K   F+W
Sbjct: 928  GIQVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQW 987

Query: 138  GRAQRACF 115
            G  Q   F
Sbjct: 988  GEPQEKAF 995



 Score = 45.1 bits (105), Expect(3) = 2e-80
 Identities = 23/44 (52%), Positives = 27/44 (61%)
 Frame = -1

Query: 134  EPKEHAFXXXXXXXXXXXXXXXPNFSKTFEIECDASGIGIGAVL 3
            EP+E AF               P+F+KTFE+ECDASGIGIG VL
Sbjct: 989  EPQEKAFQELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVL 1032



 Score = 33.5 bits (75), Expect(3) = 2e-80
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML ELSG
Sbjct: 787 YRHPIPRLDDMLDELSG 803


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  275 bits (703), Expect(3) = 2e-79
 Identities = 125/188 (66%), Positives = 156/188 (82%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++L+S Y Q+R++ GDEWKT FKTK+GLYEWLVMPFGLTNAPSTFMRLMNHV +D  G
Sbjct: 788  SKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFKDFHG 847

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K++VVYFDDILI+S  + EH+ HL+ VFE+LR+ +L+ANL KC+FC+D V+F GFVVSS 
Sbjct: 848  KFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTFCVDRVVFLGFVVSSM 907

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            G+ VD  K++AI+EWP P S ++VRSFHGLA FYRRFVRDFS+IAAPLTE+ +KDK F W
Sbjct: 908  GVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDKVFTW 967

Query: 138  GRAQRACF 115
            G+ Q   F
Sbjct: 968  GKEQDDAF 975



 Score = 39.3 bits (90), Expect(3) = 2e-79
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = -1

Query: 65   NFSKTFEIECDASGIGIGAVL 3
            +FSK+FE+ECDASG GIGAVL
Sbjct: 992  DFSKSFEVECDASGKGIGAVL 1012



 Score = 30.4 bits (67), Expect(3) = 2e-79
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML +L G
Sbjct: 767 YRHPIPRLDDMLDQLCG 783


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  275 bits (703), Expect(3) = 2e-79
 Identities = 125/188 (66%), Positives = 156/188 (82%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++L+S Y Q+R++ GDEWKT FKTK+GLYEWLVMPFGLTNAPSTFMRLMNHV +D  G
Sbjct: 788  SKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFKDFHG 847

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K++VVYFDDILI+S  + EH+ HL+ VFE+LR+ +L+ANL KC+FC+D V+F GFVVSS 
Sbjct: 848  KFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTFCVDRVVFLGFVVSSM 907

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            G+ VD  K++AI+EWP P S ++VRSFHGLA FYRRFVRDFS+IAAPLTE+ +KDK F W
Sbjct: 908  GVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDKVFTW 967

Query: 138  GRAQRACF 115
            G+ Q   F
Sbjct: 968  GKEQDDAF 975



 Score = 39.3 bits (90), Expect(3) = 2e-79
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = -1

Query: 65   NFSKTFEIECDASGIGIGAVL 3
            +FSK+FE+ECDASG GIGAVL
Sbjct: 992  DFSKSFEVECDASGKGIGAVL 1012



 Score = 30.4 bits (67), Expect(3) = 2e-79
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML +L G
Sbjct: 767 YRHPIPRLDDMLDQLCG 783


>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
          Length = 960

 Score =  271 bits (693), Expect(3) = 2e-79
 Identities = 128/202 (63%), Positives = 159/202 (78%)
 Frame = -3

Query: 690 TC*LSYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLR 511
           +C    ++L+S Y Q+RM EGDEWKT FKTK+GLYEWLVMPFGLTNA STFMRLMNHVLR
Sbjct: 281 SCVFIKIDLKSGYHQIRMKEGDEWKTAFKTKYGLYEWLVMPFGLTNALSTFMRLMNHVLR 340

Query: 510 DVIGKYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFV 331
             IG++VVVYFDDIL+YS  + EH+ HL  V  +LR  KLYANL KCSFCMD+V+F G+V
Sbjct: 341 AFIGRFVVVYFDDILVYSKNLDEHINHLHCVLAILRKEKLYANLKKCSFCMDKVVFLGYV 400

Query: 330 VSSRGIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDK 151
           VS++GI VD  K++AI+EWPTPKS ++VRSFHGLA FY RFV+DFS++AAPLTE+ +K  
Sbjct: 401 VSAKGIEVDEEKLKAIKEWPTPKSITEVRSFHGLASFYFRFVKDFSTLAAPLTEIVKKSV 460

Query: 150 KFEWGRAQRACF*FVEVEVM*C 85
            F+WG  Q     F+E++   C
Sbjct: 461 GFKWGSEQDRA--FIEIKERLC 480



 Score = 42.0 bits (97), Expect(3) = 2e-79
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = -1

Query: 65  NFSKTFEIECDASGIGIGAVL 3
           NFSKTFEIECDASGIGI  VL
Sbjct: 489 NFSKTFEIECDASGIGIATVL 509



 Score = 31.6 bits (70), Expect(3) = 2e-79
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML EL G
Sbjct: 264 YRHPIPRLDDMLDELHG 280


>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
          Length = 1323

 Score =  268 bits (686), Expect(3) = 3e-79
 Identities = 127/202 (62%), Positives = 156/202 (77%)
 Frame = -3

Query: 690  TC*LSYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLR 511
            +C  + ++L+S Y Q+RM EGDEWKT FKTK+GLYEWLVMPFGLTNAPSTFMRLMNH L 
Sbjct: 598  SCVFTKIDLKSGYHQIRMKEGDEWKTXFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALH 657

Query: 510  DVIGKYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFV 331
              IG++VVVYFDDIL+YS  + EH+ HL  V   LR  KLYANL K SFCMD+V+F G+V
Sbjct: 658  XFIGRFVVVYFDDILVYSKNLDEHINHLHCVLAXLRKEKLYANLKKFSFCMDKVVFLGYV 717

Query: 330  VSSRGIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDK 151
            VS +GI VD  KV+AI+EWPTP S ++VRSFHGLA FYRRFV+DFS++AAPLTE+ +K  
Sbjct: 718  VSXKGIEVDEEKVKAIKEWPTPXSITEVRSFHGLASFYRRFVKDFSTLAAPLTEIVKKSV 777

Query: 150  KFEWGRAQRACF*FVEVEVM*C 85
             F+WG  Q     F+E++   C
Sbjct: 778  GFKWGSEQDRA--FIEIKERLC 797



 Score = 43.9 bits (102), Expect(3) = 3e-79
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -1

Query: 65  NFSKTFEIECDASGIGIGAVL 3
           +FSKTFEIECDASGIGIGAVL
Sbjct: 806 DFSKTFEIECDASGIGIGAVL 826



 Score = 31.6 bits (70), Expect(3) = 3e-79
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML EL G
Sbjct: 581 YRHPIPRLDDMLDELHG 597


>emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]
          Length = 771

 Score =  279 bits (713), Expect(3) = 2e-78
 Identities = 130/202 (64%), Positives = 161/202 (79%)
 Frame = -3

Query: 690 TC*LSYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLR 511
           +C  + ++L+S Y Q+RM EGDEWKTTFKTK+GLYEWLVMPFGLTNAPSTFMRLMNH LR
Sbjct: 188 SCVFTKIDLKSGYHQIRMKEGDEWKTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALR 247

Query: 510 DVIGKYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFV 331
             IG++VVVYFDDIL+YS  + EH+ HL  V ++LR  KLYANL KCSFCMD+V+F G+V
Sbjct: 248 SFIGRFVVVYFDDILVYSKNLDEHINHLHCVLDVLRKXKLYANLKKCSFCMDKVVFLGYV 307

Query: 330 VSSRGIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDK 151
           VS++GI VD  KV+AI+EWPTPK  ++VRSFHGLA FYRRFV+DFS +AAPLTE+ +K  
Sbjct: 308 VSAKGIEVDEEKVKAIKEWPTPKLITEVRSFHGLASFYRRFVKDFSILAAPLTEIVKKSV 367

Query: 150 KFEWGRAQRACF*FVEVEVM*C 85
            F+WG  Q     F+E++   C
Sbjct: 368 GFKWGSEQDRA--FIEIKEKLC 387



 Score = 31.6 bits (70), Expect(3) = 2e-78
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML EL G
Sbjct: 171 YRHPIPRLDDMLDELHG 187



 Score = 30.4 bits (67), Expect(3) = 2e-78
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -1

Query: 65  NFSKTFEIECDASGIG 18
           +FSKT EIECDA GIG
Sbjct: 396 DFSKTVEIECDALGIG 411


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  267 bits (683), Expect(3) = 3e-78
 Identities = 127/188 (67%), Positives = 149/188 (79%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++LRS Y Q+RM  GDEWKT FKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR  IG
Sbjct: 861  SKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIG 920

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            ++VVVYFDDILIYS  + +H+ HLR VF  LRDA+L+ NL KC+FC D V F G+VV+ +
Sbjct: 921  RFVVVYFDDILIYSRSLEDHLDHLRAVFTALRDARLFGNLGKCTFCTDRVSFLGYVVTPQ 980

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD+AK+ AIE WP PK+ + VRSF GLAGFYRRFVRDFS+IAAPL EL++KD  + W
Sbjct: 981  GIEVDKAKIEAIESWPQPKTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNELTKKDVPYSW 1040

Query: 138  GRAQRACF 115
            G AQ   F
Sbjct: 1041 GTAQEEAF 1048



 Score = 39.7 bits (91), Expect(3) = 3e-78
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = -1

Query: 65   NFSKTFEIECDASGIGIGAVL 3
            +F+KTFE+ECDASGIG+G VL
Sbjct: 1065 DFNKTFELECDASGIGLGGVL 1085



 Score = 33.5 bits (75), Expect(3) = 3e-78
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML ELSG
Sbjct: 840 YRHPIPRLDDMLDELSG 856


>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
          Length = 1431

 Score =  266 bits (679), Expect(3) = 7e-78
 Identities = 128/188 (68%), Positives = 148/188 (78%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++LRS Y Q+RM  GDEWKT FKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR  IG
Sbjct: 750  SKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIG 809

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K+VVVYFDDILIYS  + EH +HLR VF  LRDA+L+ NL KC+FC D V F G+VV+ +
Sbjct: 810  KFVVVYFDDILIYSKSMGEHFKHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 869

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD+AKV AI+ WPTPK+ S VRSF GLAGFYRRFV+DFS+IAAPL  L++K   F W
Sbjct: 870  GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 929

Query: 138  GRAQRACF 115
            G +Q   F
Sbjct: 930  GTSQENAF 937



 Score = 40.0 bits (92), Expect(3) = 7e-78
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = -1

Query: 128  KEHAFXXXXXXXXXXXXXXXPNFSKTFEIECDASGIGIGAVL 3
            +E+AF               P+F+KTFE+ECDASGIG+G VL
Sbjct: 933  QENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVL 974



 Score = 33.5 bits (75), Expect(3) = 7e-78
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML ELSG
Sbjct: 729 YRHPIPRLDDMLDELSG 745


>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
           Group]
          Length = 848

 Score =  265 bits (677), Expect(3) = 1e-77
 Identities = 128/188 (68%), Positives = 147/188 (78%)
 Frame = -3

Query: 678 SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
           S ++LRS Y Q+RM  GDEWKT FKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR  IG
Sbjct: 169 SKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIG 228

Query: 498 KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
           K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KC+FC D V F G+VV+ +
Sbjct: 229 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 288

Query: 318 GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
           GI VD+AKV AI+ WPTPK+ S VRSF GLAGFYRRFV+DFS+IAAPL  L++K   F W
Sbjct: 289 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 348

Query: 138 GRAQRACF 115
           G +Q   F
Sbjct: 349 GTSQENAF 356



 Score = 40.0 bits (92), Expect(3) = 1e-77
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = -1

Query: 128 KEHAFXXXXXXXXXXXXXXXPNFSKTFEIECDASGIGIGAVL 3
           +E+AF               P+F+KTFE+ECDASGIG+G VL
Sbjct: 352 QENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVL 393



 Score = 33.5 bits (75), Expect(3) = 1e-77
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML ELSG
Sbjct: 148 YRHPIPRLDDMLDELSG 164


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  265 bits (676), Expect(3) = 1e-77
 Identities = 128/188 (68%), Positives = 147/188 (78%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++LRS Y Q+RM  GDEWKT FKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR  IG
Sbjct: 805  SKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIG 864

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KC+FC D V F G+VV+ +
Sbjct: 865  KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 924

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD+AKV AI+ WPTPK+ S VRSF GLAGFYRRFV+DFS+IAAPL  L++K   F W
Sbjct: 925  GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTW 984

Query: 138  GRAQRACF 115
            G +Q   F
Sbjct: 985  GTSQENAF 992



 Score = 40.0 bits (92), Expect(3) = 1e-77
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = -1

Query: 128  KEHAFXXXXXXXXXXXXXXXPNFSKTFEIECDASGIGIGAVL 3
            +E+AF               P+F+KTFE+ECDASGIG+G VL
Sbjct: 988  QENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVL 1029



 Score = 33.5 bits (75), Expect(3) = 1e-77
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML ELSG
Sbjct: 784 YRHPIPRLDDMLDELSG 800



 Score =  171 bits (432), Expect(2) = 7e-41
 Identities = 80/153 (52%), Positives = 109/153 (71%)
 Frame = -3

Query: 597  HGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIGKYVVVYFDDILIYSTCVPEHVRHLRHV 418
            +GLYE+ VM FGLTNAP+ FM LMN V  + + K+VVV+ DDIL+YS    +H  HLR V
Sbjct: 1624 YGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLV 1683

Query: 417  FELLRDAKLYANLSKCSFCMDEVIFFGFVVSSRGIYVDRAKVRAIEEWPTPKSSSDVRSF 238
               LR+ +LYA LSKC F + EV F G V+S++G+ VD   V A+ +W  PK+ + +RSF
Sbjct: 1684 LGKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSF 1743

Query: 237  HGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
             GLAG+YRRF+ +FS IA P+T+L +K++KF W
Sbjct: 1744 LGLAGYYRRFIENFSKIARPMTQLLKKEEKFVW 1776



 Score = 23.5 bits (49), Expect(2) = 7e-41
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 56   KTFEIECDASGIGIGAVL 3
            K F + CDAS  G+G VL
Sbjct: 1804 KDFMVYCDASPQGLGCVL 1821


>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
          Length = 2388

 Score =  264 bits (675), Expect(3) = 2e-77
 Identities = 128/188 (68%), Positives = 146/188 (77%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S  +LRS Y Q+RM  GDEWKT FKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR  IG
Sbjct: 641  SKADLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIG 700

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KC+FC D V F G+VV+ +
Sbjct: 701  KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 760

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD+AKV AI+ WPTPK+ S VRSF GLAGFYRRFV+DFS+IAAPL  L++K   F W
Sbjct: 761  GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 820

Query: 138  GRAQRACF 115
            G +Q   F
Sbjct: 821  GTSQENAF 828



 Score = 40.0 bits (92), Expect(3) = 2e-77
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = -1

Query: 128 KEHAFXXXXXXXXXXXXXXXPNFSKTFEIECDASGIGIGAVL 3
           +E+AF               P+F+KTFE+ECDASGIG+G VL
Sbjct: 824 QENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVL 865



 Score = 33.5 bits (75), Expect(3) = 2e-77
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML ELSG
Sbjct: 620 YRHPIPRLDDMLDELSG 636



 Score = 91.7 bits (226), Expect(2) = 3e-17
 Identities = 39/79 (49%), Positives = 57/79 (72%)
 Frame = -3

Query: 375  KCSFCMDEVIFFGFVVSSRGIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDF 196
            KC F + EV F G V+S++G+ VD   V A+ +W  PK+ + +RSF GLAG+YRRF+ +F
Sbjct: 1673 KCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENF 1732

Query: 195  SSIAAPLTELSRKDKKFEW 139
            S IA P+T+L +K++KF W
Sbjct: 1733 SKIARPMTQLLKKEEKFVW 1751



 Score = 23.5 bits (49), Expect(2) = 3e-17
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 56   KTFEIECDASGIGIGAVL 3
            K F + CDAS  G+G VL
Sbjct: 1779 KDFMVYCDASRQGLGCVL 1796


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score =  267 bits (682), Expect(3) = 2e-77
 Identities = 129/188 (68%), Positives = 148/188 (78%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++LRS Y Q+RM  GDEWKTTFKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR  IG
Sbjct: 899  SKVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIG 958

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KC+FC D V F G+VV+ +
Sbjct: 959  KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLKKCTFCTDRVSFLGYVVTPQ 1018

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD+AKV AI+ WPTPK+ S VRSF GLAGFYRRFV+DFS+IAAPL  L++K   F W
Sbjct: 1019 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 1078

Query: 138  GRAQRACF 115
            G +Q   F
Sbjct: 1079 GTSQENAF 1086



 Score = 37.4 bits (85), Expect(3) = 2e-77
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = -1

Query: 128  KEHAFXXXXXXXXXXXXXXXPNFSKTFEIECDASGIGIGAV 6
            +E+AF               P+F+KTFE+ECDA+GIG+G V
Sbjct: 1082 QENAFHMLKDKLTHAPLLQLPDFNKTFELECDANGIGLGGV 1122



 Score = 33.5 bits (75), Expect(3) = 2e-77
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML ELSG
Sbjct: 878 YRHPIPRLDDMLDELSG 894



 Score =  128 bits (321), Expect(2) = 6e-29
 Identities = 68/166 (40%), Positives = 95/166 (57%)
 Frame = -3

Query: 627  DEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIGKYVVVYFDDILIYSTCV 448
            D+ KTTF   +G Y +  M FGL NAP++F R M  +  D+I   + ++ DD  +Y    
Sbjct: 2013 DQSKTTFTCPYGTYAYRRMSFGLCNAPASFQRCMMSIFSDMIEDIMEIFMDDFSVYGKTF 2072

Query: 447  PEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSRGIYVDRAKVRAIEEWPT 268
               +++L  V +  ++  L  N  KC F + E I  G  VS RGI  DRAK+  I++ P 
Sbjct: 2073 GHCLQNLDKVLQRCQEKDLVLNWEKCHFMVREGIVLGHRVSERGIEFDRAKIDVIDQLPP 2132

Query: 267  PKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEWGRA 130
            P +   +RSF G A FYRRF++DFS+IA PLT L  KD  FE+  A
Sbjct: 2133 PVNIKGIRSFLGHADFYRRFIKDFSTIARPLTNLLAKDTPFEFDDA 2178



 Score = 26.2 bits (56), Expect(2) = 6e-29
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -1

Query: 50   FEIECDASGIGIGAVL 3
            FEI CDAS   +GAVL
Sbjct: 2205 FEIMCDASDFAVGAVL 2220


>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
          Length = 1667

 Score =  264 bits (675), Expect(3) = 2e-77
 Identities = 127/188 (67%), Positives = 148/188 (78%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++LRS Y Q+RM+ GDEWKT FKTK GLYEWLVMPFGLTNAP+TFMRLMN VLR  IG
Sbjct: 728  SKVDLRSGYHQIRMNLGDEWKTAFKTKFGLYEWLVMPFGLTNAPTTFMRLMNEVLRPFIG 787

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KC+FC D V F G+VV+ +
Sbjct: 788  KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 847

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD+AKV AI+ WPTPK+ S VRSF GLAGFYRRFV+DFS+IAAPL  L++K   F W
Sbjct: 848  GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 907

Query: 138  GRAQRACF 115
            G +Q   F
Sbjct: 908  GTSQENAF 915



 Score = 40.0 bits (92), Expect(3) = 2e-77
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = -1

Query: 128  KEHAFXXXXXXXXXXXXXXXPNFSKTFEIECDASGIGIGAVL 3
            +E+AF               P+F+KTFE+ECDASGIG+G VL
Sbjct: 911  QENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVL 952



 Score = 33.5 bits (75), Expect(3) = 2e-77
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML ELSG
Sbjct: 707 YRHPIPRLDDMLDELSG 723


>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
          Length = 1667

 Score =  264 bits (675), Expect(3) = 2e-77
 Identities = 127/188 (67%), Positives = 148/188 (78%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++LRS Y Q+RM+ GDEWKT FKTK GLYEWLVMPFGLTNAP+TFMRLMN VLR  IG
Sbjct: 728  SKVDLRSGYHQIRMNLGDEWKTAFKTKFGLYEWLVMPFGLTNAPTTFMRLMNEVLRPFIG 787

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KC+FC D V F G+VV+ +
Sbjct: 788  KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 847

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD+AKV AI+ WPTPK+ S VRSF GLAGFYRRFV+DFS+IAAPL  L++K   F W
Sbjct: 848  GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 907

Query: 138  GRAQRACF 115
            G +Q   F
Sbjct: 908  GTSQENAF 915



 Score = 40.0 bits (92), Expect(3) = 2e-77
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = -1

Query: 128  KEHAFXXXXXXXXXXXXXXXPNFSKTFEIECDASGIGIGAVL 3
            +E+AF               P+F+KTFE+ECDASGIG+G VL
Sbjct: 911  QENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVL 952



 Score = 33.5 bits (75), Expect(3) = 2e-77
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML ELSG
Sbjct: 707 YRHPIPRLDDMLDELSG 723


>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108864301|gb|ABA93040.2|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1748

 Score =  267 bits (682), Expect(3) = 2e-77
 Identities = 129/188 (68%), Positives = 148/188 (78%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++LRS Y Q+RM  GDEWKTTFKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR  IG
Sbjct: 1147 SKVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIG 1206

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KC+FC D V F G+VV+ +
Sbjct: 1207 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 1266

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD+AKV AI+ WPTPK+ S VRSF GLAGFYRRFV+DFS+IAAPL  L++K   F W
Sbjct: 1267 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 1326

Query: 138  GRAQRACF 115
            G +Q   F
Sbjct: 1327 GTSQENAF 1334



 Score = 37.0 bits (84), Expect(3) = 2e-77
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -1

Query: 128  KEHAFXXXXXXXXXXXXXXXPNFSKTFEIECDASGIGIG 12
            +E+AF               P+F+KTFE+ECDASGIG+G
Sbjct: 1330 QENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLG 1368



 Score = 33.5 bits (75), Expect(3) = 2e-77
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 718  YRFPIPRLDDMLVELSG 668
            YR PIPRLDDML ELSG
Sbjct: 1126 YRHPIPRLDDMLDELSG 1142


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score =  267 bits (682), Expect(3) = 2e-77
 Identities = 129/188 (68%), Positives = 148/188 (78%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++LRS Y Q+RM  GDEWKTTFKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR  IG
Sbjct: 1138 SKVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIG 1197

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KC+FC D V F G+VV+ +
Sbjct: 1198 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 1257

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD+AKV AI+ WPTPK+ S VRSF GLAGFYRRFV+DFS+IAAPL  L++K   F W
Sbjct: 1258 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 1317

Query: 138  GRAQRACF 115
            G +Q   F
Sbjct: 1318 GTSQENAF 1325



 Score = 37.0 bits (84), Expect(3) = 2e-77
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -1

Query: 128  KEHAFXXXXXXXXXXXXXXXPNFSKTFEIECDASGIGIG 12
            +E+AF               P+F+KTFE+ECDASGIG+G
Sbjct: 1321 QENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLG 1359



 Score = 33.5 bits (75), Expect(3) = 2e-77
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 718  YRFPIPRLDDMLVELSG 668
            YR PIPRLDDML ELSG
Sbjct: 1117 YRHPIPRLDDMLDELSG 1133


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  271 bits (693), Expect(2) = 4e-77
 Identities = 127/188 (67%), Positives = 153/188 (81%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++LR  Y Q+RM +GDEWKT FKTK+GLYEWLVMPFGLTNAPSTFMRLMNHVLR+ IG
Sbjct: 748  SKIDLRRGYHQIRMQKGDEWKTAFKTKNGLYEWLVMPFGLTNAPSTFMRLMNHVLRNFIG 807

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K+VVVYFDDILIYS    +H+ HL+ VF +LR  +LYANL KC F ++ V+F GF+VSS+
Sbjct: 808  KFVVVYFDDILIYSKDPQKHIIHLKEVFLVLRREQLYANLEKCYFGVESVVFLGFIVSSK 867

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD  K++AI +WPTPK+++ VRSFHGLA FYRRFV+DFS+IAAPL EL +KD KFEW
Sbjct: 868  GIEVDETKIQAIRDWPTPKTATKVRSFHGLASFYRRFVKDFSTIAAPLNELVKKDVKFEW 927

Query: 138  GRAQRACF 115
            G  Q   F
Sbjct: 928  GPKQEQAF 935



 Score = 44.3 bits (103), Expect(2) = 4e-77
 Identities = 20/21 (95%), Positives = 20/21 (95%)
 Frame = -1

Query: 65   NFSKTFEIECDASGIGIGAVL 3
            NF KTFEIECDASGIGIGAVL
Sbjct: 952  NFDKTFEIECDASGIGIGAVL 972


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  265 bits (678), Expect(3) = 7e-77
 Identities = 126/188 (67%), Positives = 148/188 (78%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S ++LRS Y Q+RM  GDEWKT FKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR  IG
Sbjct: 864  SKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIG 923

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            ++VVVYFDDILIYS  + +H+ HLR VF  LRDA+L+ NL KC+FC D V F G+VV+ +
Sbjct: 924  RFVVVYFDDILIYSRSLEDHLDHLRAVFTALRDARLFGNLGKCTFCTDRVSFLGYVVTPQ 983

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD+AK+ AIE WP PK+ + VRSF G AGFYRRFVRDFS+IAAPL EL++KD  + W
Sbjct: 984  GIEVDKAKIEAIESWPQPKTVTQVRSFLGXAGFYRRFVRDFSTIAAPLNELTKKDVPYSW 1043

Query: 138  GRAQRACF 115
            G AQ   F
Sbjct: 1044 GTAQEEAF 1051



 Score = 39.7 bits (91), Expect(3) = 7e-77
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = -1

Query: 65   NFSKTFEIECDASGIGIGAVL 3
            +F+KTFE+ECDASGIG+G VL
Sbjct: 1068 DFNKTFELECDASGIGLGGVL 1088



 Score = 30.8 bits (68), Expect(3) = 7e-77
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = -2

Query: 715 RFPIPRLDDMLVELSG 668
           R PIPRLDDML ELSG
Sbjct: 844 RHPIPRLDDMLDELSG 859


>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 817

 Score =  261 bits (668), Expect(3) = 9e-77
 Identities = 127/188 (67%), Positives = 146/188 (77%)
 Frame = -3

Query: 678 SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
           S ++LRS Y Q+RM  GDEWKT FKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR  IG
Sbjct: 138 SKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIG 197

Query: 498 KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
           K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KC+FC D V F  +VV+ +
Sbjct: 198 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLDYVVTPQ 257

Query: 318 GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
           GI VD+AKV AI+ WPTPK+ S VRSF GLAGFYRRFV+DFS+IAAPL  L++K   F W
Sbjct: 258 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKVVPFTW 317

Query: 138 GRAQRACF 115
           G +Q   F
Sbjct: 318 GTSQENAF 325



 Score = 42.0 bits (97), Expect(3) = 9e-77
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = -1

Query: 128 KEHAFXXXXXXXXXXXXXXXPNFSKTFEIECDASGIGIGAVL 3
           +E+AF               PNF+KTFE+ECDASGIG+G VL
Sbjct: 321 QENAFHMLKDKLTHAPLLQLPNFNKTFELECDASGIGLGGVL 362



 Score = 32.0 bits (71), Expect(3) = 9e-77
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDD+L ELSG
Sbjct: 117 YRHPIPRLDDILDELSG 133


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  261 bits (667), Expect(3) = 2e-76
 Identities = 127/188 (67%), Positives = 145/188 (77%)
 Frame = -3

Query: 678  SYLELRSSYFQVRMSEGDEWKTTFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDVIG 499
            S +ELRS Y Q+ M  GDEWKT FKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR  IG
Sbjct: 784  SKVELRSGYHQIHMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIG 843

Query: 498  KYVVVYFDDILIYSTCVPEHVRHLRHVFELLRDAKLYANLSKCSFCMDEVIFFGFVVSSR 319
            K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KC+FC D V F G+VV+ +
Sbjct: 844  KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 903

Query: 318  GIYVDRAKVRAIEEWPTPKSSSDVRSFHGLAGFYRRFVRDFSSIAAPLTELSRKDKKFEW 139
            GI VD+AKV AI+ WPTPK+ S VRSF GLAGFY RFV+DFS+IAAPL  L++K   F W
Sbjct: 904  GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYCRFVQDFSTIAAPLNALTKKGVPFTW 963

Query: 138  GRAQRACF 115
            G +Q   F
Sbjct: 964  GTSQENAF 971



 Score = 40.0 bits (92), Expect(3) = 2e-76
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = -1

Query: 128  KEHAFXXXXXXXXXXXXXXXPNFSKTFEIECDASGIGIGAVL 3
            +E+AF               P+F+KTFE+ECDASGIG+G VL
Sbjct: 967  QENAFHMLKHKLTHAPLLQLPDFNKTFELECDASGIGLGGVL 1008



 Score = 33.5 bits (75), Expect(3) = 2e-76
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 718 YRFPIPRLDDMLVELSG 668
           YR PIPRLDDML ELSG
Sbjct: 763 YRHPIPRLDDMLDELSG 779