BLASTX nr result

ID: Mentha29_contig00015223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00015223
         (392 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus...    89   5e-16
emb|CBI40152.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...    59   5e-07
emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera]    59   5e-07
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...    58   1e-06
ref|XP_006387242.1| hypothetical protein POPTR_1437s002101g, par...    56   6e-06

>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
          Length = 2113

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 59/147 (40%), Positives = 72/147 (48%), Gaps = 18/147 (12%)
 Frame = +3

Query: 6    WGSS----KKDSEL---------NNWSSSQKNSEDSKAAXXXXXXXXXXXXXXXXXXXGW 146
            WGSS    K DS+          + WSSSQK   DS  +                   GW
Sbjct: 1799 WGSSSDWVKPDSQTPTGDNTKNESPWSSSQKLLNDSTDSQ------------------GW 1840

Query: 147  GSPNVDTSSDNDAKPQWXXXXXXXXXXXXXXXXXXXXXXX----PSSDGDWRNKRPR-PV 311
            GS  VDT++DND +PQW                           P++D DW+NKR   PV
Sbjct: 1841 GSSKVDTANDNDEQPQWGRGRGRGRGRGWGRGVGRGREGSQGRGPTNDRDWKNKRSGGPV 1900

Query: 312  DDPNAPALFTATRQRLDSFTAEEQDLL 392
            DDPNAP +FTA+RQRLDSFTAEEQ++L
Sbjct: 1901 DDPNAPGIFTASRQRLDSFTAEEQEVL 1927


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
 Frame = +3

Query: 6    WGSSKKDSELNNWSSSQKNSEDSKAAXXXXXXXXXXXXXXXXXXXGWGSPNVDTSSDNDA 185
            W   ++ S+ N   S+ KN +   +                    GWGSPN     +++ 
Sbjct: 1623 WNDVEEQSQWNQRGSAVKNDQSESS----HGWGPSNEQNQLPSSQGWGSPNAGAGHESET 1678

Query: 186  KPQWXXXXXXXXXXXXXXXXXXXXXXXPSSDGDWRNKRPRPV-------DDPNAPALFTA 344
            + QW                        S++ +W+NK+ RP        DD +A  +FTA
Sbjct: 1679 QSQWGQPSGKKSRPEGSRGWG-------SNNTEWKNKKNRPNKPQGPLNDDYSAGGIFTA 1731

Query: 345  TRQRLDSFTAEEQDLL 392
            TRQR+D FT+EEQD+L
Sbjct: 1732 TRQRVDIFTSEEQDIL 1747


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
 Frame = +3

Query: 6    WGSSKKDSELNNWSSSQKNSEDSKAAXXXXXXXXXXXXXXXXXXXGWGSPNVDTSSDNDA 185
            W   ++ S+ N   S+ KN +   +                    GWGSPN     +++ 
Sbjct: 1563 WNDVEEQSQWNQRGSAVKNDQSESS----HGWGPSNEQNQLPSSQGWGSPNAGAGHESET 1618

Query: 186  KPQWXXXXXXXXXXXXXXXXXXXXXXXPSSDGDWRNKRPRPV-------DDPNAPALFTA 344
            + QW                        S++ +W+NK+ RP        DD +A  +FTA
Sbjct: 1619 QSQWGQPSGKKSRPEGSRGWG-------SNNTEWKNKKNRPNKPQGPLNDDYSAGGIFTA 1671

Query: 345  TRQRLDSFTAEEQDLL 392
            TRQR+D FT+EEQD+L
Sbjct: 1672 TRQRVDIFTSEEQDIL 1687


>emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera]
          Length = 1081

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
 Frame = +3

Query: 6    WGSSKKDSELNNWSSSQKNSEDSKAAXXXXXXXXXXXXXXXXXXXGWGSPNVDTSSDNDA 185
            W   ++ S+ N   S+ KN +   +                    GWGSPN     +++ 
Sbjct: 755  WNDVEEQSQWNQRGSAVKNDQSESS----HGWGPSNEQNQLPSSQGWGSPNAGAGHESET 810

Query: 186  KPQWXXXXXXXXXXXXXXXXXXXXXXXPSSDGDWRNKRPRPV-------DDPNAPALFTA 344
            + QW                        S++ +W+NK+ RP        DD +A  +FTA
Sbjct: 811  QSQWGQPSGKKSRPEGSRGWG-------SNNTEWKNKKNRPNKPQGPLNDDYSAGGIFTA 863

Query: 345  TRQRLDSFTAEEQDLL 392
            TRQR+D FT+EEQD+L
Sbjct: 864  TRQRVDIFTSEEQDIL 879


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
 Frame = +3

Query: 141  GWGSPNVDTSSDNDAKPQWXXXXXXXXXXXXXXXXXXXXXXXPSSDGDWRNKRPRPV--- 311
            GWG PN    + +    QW                        S++GDW+NKR RP    
Sbjct: 1710 GWGVPNSGGGNGSGRDQQWGQQSREFKKDRFEGSRGWG-----SNNGDWKNKRNRPSKPH 1764

Query: 312  DDPNAPALFTATRQRLDSFTAEEQDLL 392
            +D NA  +FT TRQRLD FT++EQD+L
Sbjct: 1765 EDLNASGIFTTTRQRLDVFTSQEQDIL 1791


>ref|XP_006387242.1| hypothetical protein POPTR_1437s002101g, partial [Populus
           trichocarpa] gi|550305984|gb|ERP46156.1| hypothetical
           protein POPTR_1437s002101g, partial [Populus
           trichocarpa]
          Length = 142

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 2/131 (1%)
 Frame = +3

Query: 6   WGSSKKDSELNNWSSSQKNSEDSKAAXXXXXXXXXXXXXXXXXXXGWGSPNVDTSSDNDA 185
           WG  K       W SS+    DS  A                   GWG PN   S+ ++ 
Sbjct: 20  WGKPKSPEISQGWGSSK----DSVKAVD-----------------GWGVPNSAGSNGSER 58

Query: 186 KPQWXXXXXXXXXXXXXXXXXXXXXXXPSSDGDW--RNKRPRPVDDPNAPALFTATRQRL 359
             QW                        S++GDW  RN+  +P +D ++  LFT TRQRL
Sbjct: 59  DQQWGQQSGEFKKNRTEGSRGWG-----SNNGDWKKRNRPSKPHEDSSSSGLFTTTRQRL 113

Query: 360 DSFTAEEQDLL 392
           D FT++EQD+L
Sbjct: 114 DIFTSQEQDIL 124


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