BLASTX nr result
ID: Mentha29_contig00013264
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00013264
(4134 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus... 2231 0.0
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 2231 0.0
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 2228 0.0
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i... 2223 0.0
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su... 2222 0.0
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr... 2221 0.0
ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phas... 2216 0.0
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 2215 0.0
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh... 2215 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 2214 0.0
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not... 2213 0.0
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su... 2212 0.0
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 2211 0.0
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su... 2209 0.0
ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phas... 2209 0.0
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia... 2207 0.0
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su... 2206 0.0
ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Popu... 2204 0.0
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su... 2200 0.0
ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca... 2199 0.0
>gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus guttatus]
Length = 1197
Score = 2231 bits (5781), Expect = 0.0
Identities = 1113/1193 (93%), Positives = 1133/1193 (94%), Gaps = 2/1193 (0%)
Frame = -2
Query: 4028 MYMDDE-YEQGDTGEEQXXXXXXXXXXXXXXXXXDITQEDAWAVISAYFEEKGLVRQQLD 3852
M MD+E YEQG EE +ITQEDAWAVISAYFEEKGLVRQQLD
Sbjct: 1 MDMDEEFYEQGYPDEE-----------FEEEDEEEITQEDAWAVISAYFEEKGLVRQQLD 49
Query: 3851 SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKISFGQIYLSKPMMTESDG 3672
SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF ETIYKISFGQIYLSKPMMTESDG
Sbjct: 50 SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDG 109
Query: 3671 ETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSS 3492
ETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSS
Sbjct: 110 ETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSS 169
Query: 3491 YCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV 3312
YCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV
Sbjct: 170 YCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV 229
Query: 3311 AEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVA 3132
AEVRSMAETQNRPPSTMF+RML+RTSAKGGSSGQYIRATLPYIR+EIPIIIVFRALGFVA
Sbjct: 230 AEVRSMAETQNRPPSTMFIRMLARTSAKGGSSGQYIRATLPYIRSEIPIIIVFRALGFVA 289
Query: 3131 DKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAK 2952
DKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+++RIKYAK
Sbjct: 290 DKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTRDRRIKYAK 349
Query: 2951 EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLL 2772
EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLL
Sbjct: 350 EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLL 409
Query: 2771 GGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAG 2592
GGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAG
Sbjct: 410 GGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAG 469
Query: 2591 TRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACG 2412
TRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACG
Sbjct: 470 TRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACG 529
Query: 2411 LVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPD 2232
LVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPD
Sbjct: 530 LVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPD 589
Query: 2231 MLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDILA 2052
MLVST RVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI A
Sbjct: 590 MLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQA 649
Query: 2051 LQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXXXXIHDLVQARDRPQEAYSDTYTHCE 1872
LQQRESP+DGGWHDLV+KGF I+DLV AR P EAYSDTYTHCE
Sbjct: 650 LQQRESPDDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARINPGEAYSDTYTHCE 709
Query: 1871 IHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKP 1692
IHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKP
Sbjct: 710 IHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKP 769
Query: 1691 LVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDE 1512
LVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDE
Sbjct: 770 LVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDE 829
Query: 1511 EKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDD 1332
EKKMGTLVKEDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI D+
Sbjct: 830 EKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPITPDE 889
Query: 1331 AQGQA-ARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSR 1155
AQGQA ARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSR
Sbjct: 890 AQGQANARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSR 949
Query: 1154 HGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGD 975
HGQKGTVGMTYTQEDMPWTLEGI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGD
Sbjct: 950 HGQKGTVGMTYTQEDMPWTLEGINPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGD 1009
Query: 974 ATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKI 795
ATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR+L SMIFLGPTYYQRLKHMVDDKI
Sbjct: 1010 ATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKI 1069
Query: 794 HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVC 615
HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVC
Sbjct: 1070 HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVC 1129
Query: 614 ERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMM 456
E+CGLIAIANLKKNSFECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRM+
Sbjct: 1130 EKCGLIAIANLKKNSFECRACKNKTDIVQVHIPYACKLLFQELMSMAIAPRML 1182
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 2231 bits (5780), Expect = 0.0
Identities = 1104/1157 (95%), Positives = 1122/1157 (96%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNGCWVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIVEKQRLLIKKKDI ALQQRES E+GGWHDLV+KGF
Sbjct: 623 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
IHDLVQAR P+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTRVSGEDVIIGKT+PIA ++AQGQ+ARYT+RDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 922
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL +MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1162
Query: 506 KLLFQELMAMAIAPRMM 456
KLLFQELMAMAIAPRM+
Sbjct: 1163 KLLFQELMAMAIAPRML 1179
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 2228 bits (5773), Expect = 0.0
Identities = 1102/1157 (95%), Positives = 1121/1157 (96%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 319
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNGCWVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIVEKQRLLIK+KDI ALQQRE+PEDGGWHDLV+KGF
Sbjct: 620 YGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I+DLV AR P+EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR NTMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTRVSGEDV+IGKT+PIA D+AQG AARYT+RDHSTSLRHSETGMVDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVVIGKTTPIAQDEAQGPAARYTRRDHSTSLRHSETGMVDQVLLTTNAD 919
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTMEGITPDIIVNPHAIPS 979
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1039
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL SMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 506 KLLFQELMAMAIAPRMM 456
KLLFQELM+MAIAPRM+
Sbjct: 1160 KLLFQELMSMAIAPRML 1176
>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
polymerase family protein isoform 1 [Theobroma cacao]
Length = 1189
Score = 2223 bits (5761), Expect = 0.0
Identities = 1097/1157 (94%), Positives = 1125/1157 (97%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVG++CETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLC 379
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNGCWVG+HRNPDMLV+T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIVEKQRLLIKKKDI ALQQRESPEDGGWHDLV+KGF
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I+DLVQAR P+EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR NTMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTRVSGEDVIIGKT+PI+ ++AQGQA+RY++RDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSISLRHSETGIVDQVLLTTNAD 919
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRG+ETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1039
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYAC 1159
Query: 506 KLLFQELMAMAIAPRMM 456
KLLFQELMAMAIAPRM+
Sbjct: 1160 KLLFQELMAMAIAPRML 1176
>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
sinensis]
Length = 1195
Score = 2222 bits (5757), Expect = 0.0
Identities = 1096/1157 (94%), Positives = 1123/1157 (97%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q D
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSD 82
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+FQDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQ 322
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRGATVGVT++KRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLC 382
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 442
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNGCWVGIHR+P+MLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIVEKQRLLIKK+DI+ALQQRESPEDGGWHDLV+KGF
Sbjct: 623 YGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I+DLVQAR P+EAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 862
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTRVSGEDVIIGKT+PI+ D+AQGQA+RYT+RDHS SLRHSETGMVDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNAD 922
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL +MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1162
Query: 506 KLLFQELMAMAIAPRMM 456
KLLFQELMAMAIAPRM+
Sbjct: 1163 KLLFQELMAMAIAPRML 1179
>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
gi|557525528|gb|ESR36834.1| hypothetical protein
CICLE_v10027701mg [Citrus clementina]
Length = 1195
Score = 2221 bits (5754), Expect = 0.0
Identities = 1095/1157 (94%), Positives = 1123/1157 (97%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q D
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSD 82
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+FQDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQ 322
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRGATVGVT++KRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLC 382
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 442
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNGCWVGIHR+P+MLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIVEKQRLLIKK+DI+ALQQRESPEDGGWHDLV+KGF
Sbjct: 623 YGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I+DLVQAR P+EAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 862
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTRVSGEDVIIGKT+PI+ D+AQGQA+RYT+RDHS SLRHSETGMVDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNAD 922
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL +MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGA+HFLKERLFDQSDAYR+HVCE CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1103 AHGASHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1162
Query: 506 KLLFQELMAMAIAPRMM 456
KLLFQELMAMAIAPRM+
Sbjct: 1163 KLLFQELMAMAIAPRML 1179
>ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
gi|561021391|gb|ESW20162.1| hypothetical protein
PHAVU_006G185800g [Phaseolus vulgaris]
Length = 1194
Score = 2216 bits (5741), Expect = 0.0
Identities = 1095/1157 (94%), Positives = 1122/1157 (96%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIY+ISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 83 FAETIYRISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 502
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNG W+GIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGSWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIV+KQRLLIKK+DI ALQQRESPE+GGWHDLVSKGF
Sbjct: 623 YGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 682
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I+DLVQAR P++AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARLNPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 862
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTRVSGEDVIIGKT+PI+ ++AQGQA RYT+RDHS SLRHSETGMVDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGMVDQVLLTTNAD 922
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYAC 1162
Query: 506 KLLFQELMAMAIAPRMM 456
KLLFQELMAMAIAPRM+
Sbjct: 1163 KLLFQELMAMAIAPRML 1179
>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1192
Score = 2215 bits (5740), Expect = 0.0
Identities = 1095/1157 (94%), Positives = 1120/1157 (96%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTE QDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTEAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F TQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSYTQMMELLRPSLEEAFVIQNQQ 322
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNGCW+GIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIV+KQRLLIKKKDI ALQQRESPEDGGWHDLVSKGF
Sbjct: 623 YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMIS 682
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I+DLVQAR P++AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIV+IACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVSIACYSGYNQED 802
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTRVSGEDVIIGKT+PI+ ++AQGQA RYT+RDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGIVDQVLLTTNAD 922
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYAC 1162
Query: 506 KLLFQELMAMAIAPRMM 456
KLLFQELMAMAIAPRM+
Sbjct: 1163 KLLFQELMAMAIAPRML 1179
>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
Length = 1200
Score = 2215 bits (5740), Expect = 0.0
Identities = 1096/1157 (94%), Positives = 1119/1157 (96%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
I+QEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QPD
Sbjct: 29 ISQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQPD 88
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 89 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 148
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 149 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 208
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 209 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAEAQNRPPSTMFVRMLSRTSAKGGSSGQY 268
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHIC+N DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 269 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICFNSSDTQMMELLRPSLEEAFVIQNQQ 328
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRG+TVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 329 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 388
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQF I
Sbjct: 389 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFXI 448
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRL+SPIGREGKLA
Sbjct: 449 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLBSPIGREGKLA 508
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 509 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 568
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNG WVGIHRNPDMLVST RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 569 SPAVIPQATKIFVNGLWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 628
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIVEKQRLLIKKKD+ ALQQRESP+DGGWH+LV+KGF
Sbjct: 629 YGRCSRPLFIVEKQRLLIKKKDVQALQQRESPDDGGWHELVAKGFIEYIDTEEEETTMIS 688
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I+DL+ A+ P EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 689 MTINDLLSAKVNPTEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 748
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 749 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 808
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 809 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 868
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTR SGEDVIIGKT+PI+ DDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD
Sbjct: 869 LAPPGTRCSGEDVIIGKTTPISPDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 928
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI+PDIIVNPHAIPS
Sbjct: 929 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGISPDIIVNPHAIPS 988
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR
Sbjct: 989 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1048
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL+SMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1049 RLSSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1108
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGAAHFLKERLFDQSDAYRIHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1109 AHGAAHFLKERLFDQSDAYRIHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1168
Query: 506 KLLFQELMAMAIAPRMM 456
KLLFQELM+MAIAPRM+
Sbjct: 1169 KLLFQELMSMAIAPRML 1185
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 2214 bits (5737), Expect = 0.0
Identities = 1102/1194 (92%), Positives = 1131/1194 (94%), Gaps = 3/1194 (0%)
Frame = -2
Query: 4028 MYMDDEYEQG---DTGEEQXXXXXXXXXXXXXXXXXDITQEDAWAVISAYFEEKGLVRQQ 3858
M M+DEYE D EE+ ITQEDAWAVISAYFEEKGLVRQQ
Sbjct: 1 MDMEDEYEPQYNVDDDEEE------------------ITQEDAWAVISAYFEEKGLVRQQ 42
Query: 3857 LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKISFGQIYLSKPMMTES 3678
LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ETIYKI+FGQIYLSKPMMTES
Sbjct: 43 LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTES 102
Query: 3677 DGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLR 3498
DGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLR
Sbjct: 103 DGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLR 162
Query: 3497 SSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA 3318
SSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA
Sbjct: 163 SSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA 222
Query: 3317 YVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGF 3138
+VAEVRSMA+TQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGF
Sbjct: 223 FVAEVRSMADTQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGF 282
Query: 3137 VADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKY 2958
VADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKY
Sbjct: 283 VADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKY 342
Query: 2957 AKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGP 2778
AKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGP
Sbjct: 343 AKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGP 402
Query: 2777 LLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANA 2598
LLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANA
Sbjct: 403 LLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANA 462
Query: 2597 AGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQA 2418
AGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQA
Sbjct: 463 AGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQA 522
Query: 2417 CGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRN 2238
CGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHR+
Sbjct: 523 CGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRD 582
Query: 2237 PDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI 2058
PDMLV T RVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+IKKKDI
Sbjct: 583 PDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDI 642
Query: 2057 LALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXXXXIHDLVQARDRPQEAYSDTYTH 1878
LQQRESP++GGWHDLV+KG+ I+DLVQAR P +AYSDTYTH
Sbjct: 643 QTLQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTH 702
Query: 1877 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQ 1698
CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQ
Sbjct: 703 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQ 762
Query: 1697 KPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYR 1518
KPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYR
Sbjct: 763 KPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR 822
Query: 1517 DEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAG 1338
DEEKKMGTLVKEDFGRPDR +TMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI+
Sbjct: 823 DEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQ 882
Query: 1337 DDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSS 1158
DDAQGQA+RYT++DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSS
Sbjct: 883 DDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSS 942
Query: 1157 RHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEG 978
RHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEG
Sbjct: 943 RHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEG 1002
Query: 977 DATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDK 798
DATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL++MIFLGPTYYQRLKHMVDDK
Sbjct: 1003 DATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDK 1062
Query: 797 IHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHV 618
IHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HV
Sbjct: 1063 IHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHV 1122
Query: 617 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMM 456
CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM+
Sbjct: 1123 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1176
>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 1193
Score = 2213 bits (5734), Expect = 0.0
Identities = 1095/1158 (94%), Positives = 1119/1158 (96%), Gaps = 1/1158 (0%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 21 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 81 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 141 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQY
Sbjct: 201 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 260
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIR EIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 261 IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVG GE+CETKKAYYFGYIIHRLLLC
Sbjct: 321 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGEFCETKKAYYFGYIIHRLLLC 380
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 381 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 440
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 441 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 501 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNGCWVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 561 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIVEKQRLLIKK+DI ALQQRE+PE+ GWHDLVS GF
Sbjct: 621 YGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDLVSNGFIEYIDTEEEETTMIS 680
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I+DLVQAR P+EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 681 MTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 741 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQS++DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 801 SVIMNQSAIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 860
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAA-RYTKRDHSTSLRHSETGMVDQVLLTTNA 1230
LAPPGTRVSGEDVIIGKT+PIA D+AQGQAA RYT+RDHS SLRHSE G+VDQVLLTTNA
Sbjct: 861 LAPPGTRVSGEDVIIGKTTPIAQDEAQGQAASRYTRRDHSISLRHSENGIVDQVLLTTNA 920
Query: 1229 DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIP 1050
DGLRFVKVRVRS+RIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIP
Sbjct: 921 DGLRFVKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 980
Query: 1049 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTG 870
SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTG
Sbjct: 981 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 1040
Query: 869 RRLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 690
RRL +MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM
Sbjct: 1041 RRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 1100
Query: 689 IAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYA 510
IAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYA
Sbjct: 1101 IAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYA 1160
Query: 509 CKLLFQELMAMAIAPRMM 456
CKLLFQELMAMAIAPRM+
Sbjct: 1161 CKLLFQELMAMAIAPRML 1178
>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer
arietinum]
Length = 1194
Score = 2212 bits (5733), Expect = 0.0
Identities = 1091/1157 (94%), Positives = 1122/1157 (96%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKISFGQIYLSKPMMTESDGET+TLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETSTLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTL+QNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRGATVGVTKEKRIKYAK+ILQ+EMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKDILQREMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNGCW+GIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIV+KQRLLIKKKDI +LQQRESPE+GGWHDLVSKGF
Sbjct: 623 YGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 682
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I+DLVQAR P+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 802
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTRVSGEDVIIGKT+P++ ++AQGQAARY+KRDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPLSQEEAQGQAARYSKRDHSISLRHSETGIVDQVLLTTNAD 922
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKKNSFECRGCKNKTDIVQV+IPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYAC 1162
Query: 506 KLLFQELMAMAIAPRMM 456
KLLFQELMAMAIAPRM+
Sbjct: 1163 KLLFQELMAMAIAPRML 1179
>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
tuberosum]
Length = 1191
Score = 2211 bits (5729), Expect = 0.0
Identities = 1092/1157 (94%), Positives = 1119/1157 (96%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 80 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 199
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 319
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNG WVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIVEKQRL+IKKKDI LQQRESP++GGWHDLV+KG+
Sbjct: 620 YGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMIS 679
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I+DLVQAR P +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRATTMGMRHGSYDKLDDDG 859
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTRVSGEDVIIGKT+PI+ DDAQGQA+RYT++DHSTSLRHSETGMVDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNAD 919
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI+PDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGISPDIIVNPHAIPS 979
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1039
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 506 KLLFQELMAMAIAPRMM 456
KLLFQELMAMAIAPRM+
Sbjct: 1160 KLLFQELMAMAIAPRML 1176
>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1193
Score = 2209 bits (5725), Expect = 0.0
Identities = 1092/1157 (94%), Positives = 1118/1157 (96%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRV+KKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVVKKGHD 142
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQD TKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DT MMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTLMMELLRPSLEEAFVIQNQQ 322
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNGCW+GIHR+PDMLV T RVDVNTEVGVVRDI LKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIILKELRIYTD 622
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIV+KQRLLIKKKDI ALQQRESPEDGGWHDLVSKGF
Sbjct: 623 YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMIS 682
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I+DLVQAR P++AY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTRVSGEDVIIGKT+PI+ ++AQGQA RYT+RDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGIVDQVLLTTNAD 922
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYAC 1162
Query: 506 KLLFQELMAMAIAPRMM 456
KLLFQELMAMAIAPRM+
Sbjct: 1163 KLLFQELMAMAIAPRML 1179
>ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris]
gi|561011794|gb|ESW10701.1| hypothetical protein
PHAVU_009G230400g [Phaseolus vulgaris]
Length = 1196
Score = 2209 bits (5723), Expect = 0.0
Identities = 1093/1191 (91%), Positives = 1132/1191 (95%)
Frame = -2
Query: 4028 MYMDDEYEQGDTGEEQXXXXXXXXXXXXXXXXXDITQEDAWAVISAYFEEKGLVRQQLDS 3849
M ++DEYE+ +E+ ITQEDAWAVISAYFEEKGLVRQQLDS
Sbjct: 1 MELEDEYEEQMMEDEEEEDE--------------ITQEDAWAVISAYFEEKGLVRQQLDS 46
Query: 3848 FDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKISFGQIYLSKPMMTESDGE 3669
FDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D ET+YKISFGQIYLSKPMMTESDGE
Sbjct: 47 FDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDSAETVYKISFGQIYLSKPMMTESDGE 106
Query: 3668 TATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSY 3489
TA+LFPKAARLRNLTYSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSY
Sbjct: 107 TASLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSY 166
Query: 3488 CTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVA 3309
CTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVA
Sbjct: 167 CTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVA 226
Query: 3308 EVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVAD 3129
EVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVAD
Sbjct: 227 EVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVAD 286
Query: 3128 KDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKE 2949
KDILEHICY+F DTQMM+LLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTKEKRIKYAKE
Sbjct: 287 KDILEHICYDFSDTQMMDLLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKE 346
Query: 2948 ILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLG 2769
ILQKEMLPHVG+GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLG
Sbjct: 347 ILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLG 406
Query: 2768 GLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGT 2589
GLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAIKAKT+TSGLKYSLATGNWGQANAAGT
Sbjct: 407 GLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTVTSGLKYSLATGNWGQANAAGT 466
Query: 2588 RAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGL 2409
RAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGL
Sbjct: 467 RAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGL 526
Query: 2408 VKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDM 2229
VKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIHR+PDM
Sbjct: 527 VKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDM 586
Query: 2228 LVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDILAL 2049
LV T RVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV++QRLLIKKKDI AL
Sbjct: 587 LVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDRQRLLIKKKDIHAL 646
Query: 2048 QQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXXXXIHDLVQARDRPQEAYSDTYTHCEI 1869
QQRESPE+GGWHDLVSKGF I+DLVQAR P+EAYSDTYTHCEI
Sbjct: 647 QQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEI 706
Query: 1868 HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 1689
HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL
Sbjct: 707 HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 766
Query: 1688 VTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEE 1509
VTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEE
Sbjct: 767 VTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEE 826
Query: 1508 KKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDA 1329
KKMGTLVKEDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI+ ++A
Sbjct: 827 KKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEA 886
Query: 1328 QGQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 1149
QGQA RYT+RDHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 887 QGQALRYTRRDHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 946
Query: 1148 QKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDAT 969
QKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDAT
Sbjct: 947 QKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDAT 1006
Query: 968 PFTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHS 789
PFTDVTVD+ISKALHKCGYQMRG+ETMYNGHTGRRL++MIFLGPTYYQRLKHMVDDKIHS
Sbjct: 1007 PFTDVTVDSISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHS 1066
Query: 788 RGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCER 609
RGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE+
Sbjct: 1067 RGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEK 1126
Query: 608 CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMM 456
CGLIAIANLKKNSFECRGCKNKTDIVQV IPYACKLLFQELMAMAIAPRM+
Sbjct: 1127 CGLIAIANLKKNSFECRGCKNKTDIVQVFIPYACKLLFQELMAMAIAPRML 1177
>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
Length = 1195
Score = 2207 bits (5720), Expect = 0.0
Identities = 1091/1157 (94%), Positives = 1119/1157 (96%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 24 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 83
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 84 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 143
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 144 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 203
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 204 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 263
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 264 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 323
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 324 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 383
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 384 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 443
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 444 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 503
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE GTENFEEI
Sbjct: 504 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEXGTENFEEI 563
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFV+G W+GIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 564 SPAVIPQATKIFVBGTWMGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 623
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIVEKQ+LLIKKKDI LQQRE+PE+GGWHDLV+KG+
Sbjct: 624 YGRCSRPLFIVEKQKLLIKKKDIQQLQQRETPEEGGWHDLVAKGYIEYIDTEEEETTMIS 683
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I+DLVQA P++AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 684 MTINDLVQASINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 743
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 744 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 803
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR +TMGMRHGSYDKLDDDG
Sbjct: 804 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDG 863
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTRVSGEDVIIGKT+PI+ DDAQGQA+RYT++DHSTSLRHSETGMVDQVLLTTNAD
Sbjct: 864 LAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNAD 923
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 924 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPS 983
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR
Sbjct: 984 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1043
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL +MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1044 RLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1103
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1104 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1163
Query: 506 KLLFQELMAMAIAPRMM 456
KLLFQELMAMAIAPRM+
Sbjct: 1164 KLLFQELMAMAIAPRML 1180
>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus]
Length = 1199
Score = 2206 bits (5716), Expect = 0.0
Identities = 1092/1156 (94%), Positives = 1117/1156 (96%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 28 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 87
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 88 VAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 147
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 148 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 207
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 208 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 267
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIR EIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 268 IRATLPYIRNEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 327
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRG+TVGVTKEKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYIIHRLLLC
Sbjct: 328 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 387
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 388 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 447
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 448 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 507
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2307
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 508 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 567
Query: 2306 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2127
SPAVIPQATKIFVNGCWVGIHR+P+MLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 568 SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 627
Query: 2126 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 1947
YGRCSRPLFIVEKQRLLIKKKDI ALQQRESPEDGGWHDLV+KGF
Sbjct: 628 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 687
Query: 1946 XXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1767
I DL+QAR P EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 688 MTISDLIQARINPVEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 747
Query: 1766 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1587
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 748 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 807
Query: 1586 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 1407
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 808 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 867
Query: 1406 LAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1227
LAPPGTRVSGEDVIIGKT+PI+ ++AQGQAARY++RDHS SLRHSE G+VDQVLLTTNAD
Sbjct: 868 LAPPGTRVSGEDVIIGKTTPISQEEAQGQAARYSRRDHSISLRHSENGIVDQVLLTTNAD 927
Query: 1226 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 1047
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 928 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 987
Query: 1046 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR 867
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR
Sbjct: 988 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1047
Query: 866 RLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 687
RL++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1048 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1107
Query: 686 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 507
AHGAAHFLKERLFDQSDAYRIHVCE CGLIAIANLKK+SFECRGCKNKTDIVQV+IPYAC
Sbjct: 1108 AHGAAHFLKERLFDQSDAYRIHVCECCGLIAIANLKKSSFECRGCKNKTDIVQVYIPYAC 1167
Query: 506 KLLFQELMAMAIAPRM 459
KLLFQELMAMAIAPRM
Sbjct: 1168 KLLFQELMAMAIAPRM 1183
>ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa]
gi|550340301|gb|EEE85647.2| hypothetical protein
POPTR_0004s04320g [Populus trichocarpa]
Length = 1215
Score = 2204 bits (5710), Expect = 0.0
Identities = 1099/1174 (93%), Positives = 1120/1174 (95%), Gaps = 17/1174 (1%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 27 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 86
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 87 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 146
Query: 3566 GEEVTETQDFTKVFIGK--------VPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFI 3411
GEEVTETQDFTKVFIGK VPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFI
Sbjct: 147 GEEVTETQDFTKVFIGKASIMNYLFVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFI 206
Query: 3410 INGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSA 3231
INGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAE+QNRPPSTMFVRMLSRTSA
Sbjct: 207 INGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRTSA 266
Query: 3230 KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEE 3051
KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEE
Sbjct: 267 KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEE 326
Query: 3050 AFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGY 2871
AFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGY
Sbjct: 327 AFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGY 386
Query: 2870 IIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK 2691
IIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK
Sbjct: 387 IIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK 446
Query: 2690 DVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSP 2511
DVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSP
Sbjct: 447 DVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSP 506
Query: 2510 IGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEW 2331
IGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEW
Sbjct: 507 IGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEW 566
Query: 2330 GTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRL 2151
GTENFEEISPAVIPQATKIFVNG WVGIHR+PDMLV T RVDVNTEVGVVRDIRL
Sbjct: 567 GTENFEEISPAVIPQATKIFVNGGWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRL 626
Query: 2150 KELRIYTDYGRCSRPLFIVEKQRLLIKKKDILALQQRES---------PEDGGWHDLVSK 1998
KELRIYTDYGRCSRPLFIVEKQ+LLI+KKDI ALQQR S +GGWHDLVSK
Sbjct: 627 KELRIYTDYGRCSRPLFIVEKQKLLIRKKDIHALQQRVSHLIYNDHLFKYEGGWHDLVSK 686
Query: 1997 GFXXXXXXXXXXXXXXXXXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPD 1818
GF IHDLVQAR P+EAYSDTYTHCEIHPSLILGVCASIIPFPD
Sbjct: 687 GFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPD 746
Query: 1817 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 1638
HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
Sbjct: 747 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 806
Query: 1637 INAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRT 1458
INAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+
Sbjct: 807 INAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRS 866
Query: 1457 NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSLR 1278
NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA ++AQGQ+ARYT+RDHS SLR
Sbjct: 867 NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLR 926
Query: 1277 HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 1098
HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT
Sbjct: 927 HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 986
Query: 1097 LEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC 918
+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC
Sbjct: 987 VEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC 1046
Query: 917 GYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 738
GYQMRG+ETMYNGHTGRRL++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR
Sbjct: 1047 GYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 1106
Query: 737 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECR 558
SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECR
Sbjct: 1107 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECR 1166
Query: 557 GCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMM 456
GCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM+
Sbjct: 1167 GCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1200
>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] gi|147841183|emb|CAN72948.1| hypothetical
protein VITISV_033708 [Vitis vinifera]
gi|302143287|emb|CBI21848.3| unnamed protein product
[Vitis vinifera]
Length = 1193
Score = 2200 bits (5700), Expect = 0.0
Identities = 1089/1191 (91%), Positives = 1126/1191 (94%)
Frame = -2
Query: 4028 MYMDDEYEQGDTGEEQXXXXXXXXXXXXXXXXXDITQEDAWAVISAYFEEKGLVRQQLDS 3849
MY +DEY+ EE+ ITQEDAWAVISAYFEEKGLVRQQLDS
Sbjct: 1 MYGEDEYDPTVVEEEEDDDEE-------------ITQEDAWAVISAYFEEKGLVRQQLDS 47
Query: 3848 FDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKISFGQIYLSKPMMTESDGE 3669
FDEFIQNTMQEIVDESADIEIRPESQHNPG Q DF+ETIYKISFGQIYLSKPMMTESDGE
Sbjct: 48 FDEFIQNTMQEIVDESADIEIRPESQHNPGRQSDFLETIYKISFGQIYLSKPMMTESDGE 107
Query: 3668 TATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSY 3489
TATLFPKAARLRNLTYSAPLYVDVTKR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSY
Sbjct: 108 TATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHDLEEVTETQEFTKVFIGKVPIMLRSSY 167
Query: 3488 CTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVA 3309
CT+YQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVA
Sbjct: 168 CTVYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVA 227
Query: 3308 EVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVAD 3129
EVRSMAE+QNRPPS+MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVAD
Sbjct: 228 EVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVAD 287
Query: 3128 KDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKE 2949
KDILEHICY+F DTQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYAKE
Sbjct: 288 KDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKE 347
Query: 2948 ILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLG 2769
ILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLG
Sbjct: 348 ILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLG 407
Query: 2768 GLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGT 2589
GLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGT
Sbjct: 408 GLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGT 467
Query: 2588 RAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGL 2409
RAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGL
Sbjct: 468 RAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGL 527
Query: 2408 VKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDM 2229
VKNLALMVYITVGSAA PILEFLEEW TENFEEISPAVIPQ+TKIFVNGCWVGIHRNPD+
Sbjct: 528 VKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPDL 587
Query: 2228 LVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDILAL 2049
LV T +VDVNTEVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKK+DI AL
Sbjct: 588 LVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKRDIRAL 647
Query: 2048 QQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXXXXIHDLVQARDRPQEAYSDTYTHCEI 1869
Q RESPEDGGWHDLVSKGF I+DL+ AR P+EAYS+TYTHCEI
Sbjct: 648 QLRESPEDGGWHDLVSKGFIEYVDTEEEETTMISMTINDLISARLNPEEAYSETYTHCEI 707
Query: 1868 HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 1689
HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPL
Sbjct: 708 HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPL 767
Query: 1688 VTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEE 1509
VTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEE
Sbjct: 768 VTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEE 827
Query: 1508 KKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDA 1329
KKMGTLVKEDFGRP+R NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI+ DD+
Sbjct: 828 KKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDS 887
Query: 1328 QGQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 1149
QGQA+RYT+RDHSTSLRHSE+GMVDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHG
Sbjct: 888 QGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHG 947
Query: 1148 QKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDAT 969
QKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDAT
Sbjct: 948 QKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDAT 1007
Query: 968 PFTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHS 789
PFTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL +MIFLGPTYYQRLKHMVDDKIHS
Sbjct: 1008 PFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHS 1067
Query: 788 RGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCER 609
RGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCER
Sbjct: 1068 RGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCER 1127
Query: 608 CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMM 456
CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM+
Sbjct: 1128 CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1178
>ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula]
gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase
[Medicago truncatula]
Length = 1213
Score = 2199 bits (5697), Expect = 0.0
Identities = 1092/1175 (92%), Positives = 1120/1175 (95%), Gaps = 18/1175 (1%)
Frame = -2
Query: 3926 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3747
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 24 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 83
Query: 3746 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3567
F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 84 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 143
Query: 3566 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3387
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 144 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 203
Query: 3386 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3207
IAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAE+QNRPPSTMFVRMLSR SAKGGSSGQY
Sbjct: 204 IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRASAKGGSSGQY 263
Query: 3206 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3027
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 264 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 323
Query: 3026 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2847
VALDYIGKRG+TVGVTKEKRIKYAK+ILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 324 VALDYIGKRGSTVGVTKEKRIKYAKDILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 383
Query: 2846 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2667
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 384 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 443
Query: 2666 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2487
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 444 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 503
Query: 2486 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFE-- 2313
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFE
Sbjct: 504 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEVL 563
Query: 2312 ------EISPAVIPQATKIFVNGCWVGIHRNPDMLV----------STXXXXXXRVDVNT 2181
EISPAVIPQATKIFVNGCW+GIHR+PDMLV S +VDVNT
Sbjct: 564 VISFIKEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRFSAEGFDVVQVDVNT 623
Query: 2180 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVS 2001
EVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI +LQQRESPEDGGWHDLVS
Sbjct: 624 EVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEDGGWHDLVS 683
Query: 2000 KGFXXXXXXXXXXXXXXXXXIHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFP 1821
KGF I+DLVQAR P+EAYSDTYTHCEIHPSLILGVCASIIPFP
Sbjct: 684 KGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFP 743
Query: 1820 DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 1641
DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA
Sbjct: 744 DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 803
Query: 1640 GINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 1461
GINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR
Sbjct: 804 GINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 863
Query: 1460 TNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTKRDHSTSL 1281
NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+P++ ++ QGQAARY+KRDHS SL
Sbjct: 864 ANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEQQGQAARYSKRDHSISL 923
Query: 1280 RHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 1101
RHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW
Sbjct: 924 RHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 983
Query: 1100 TLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK 921
T+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK
Sbjct: 984 TVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK 1043
Query: 920 CGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG 741
CGYQMRG+ETMYNGHTGRRL++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG
Sbjct: 1044 CGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG 1103
Query: 740 RSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFEC 561
RSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFEC
Sbjct: 1104 RSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFEC 1163
Query: 560 RGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMM 456
RGCKNKTDIVQV+IPYACKLLFQELMAMAIAPRM+
Sbjct: 1164 RGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRML 1198