BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00012748
         (3234 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...  1473   0.0  
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...  1307   0.0  
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...  1294   0.0  
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...  1278   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1097   0.0  
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...  1097   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1022   0.0  
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   995   0.0  
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   992   0.0  
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun...   984   0.0  
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro...   981   0.0  
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   978   0.0  
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro...   977   0.0  
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   977   0.0  
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...   976   0.0  
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   971   0.0  
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...   969   0.0  
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   958   0.0  
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...   957   0.0  
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...   954   0.0  

>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score = 1473 bits (3813), Expect = 0.0
 Identities = 747/1064 (70%), Positives = 872/1064 (81%), Gaps = 30/1064 (2%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            YIVPTKGDTVRGLIQDHIV AVL+TMKNTF+ RSEF+QLLYGSGVFA+GPGS P + S K
Sbjct: 658  YIVPTKGDTVRGLIQDHIVGAVLLTMKNTFVNRSEFNQLLYGSGVFASGPGSLPKNNSRK 717

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            V+++D+EG+VES+LPA+WKPEPLWTGKQVITALLNHITRGCAP TV+NQGK+PKNYF   
Sbjct: 718  VTLIDTEGVVESVLPAIWKPEPLWTGKQVITALLNHITRGCAPFTVENQGKIPKNYFFGN 777

Query: 362  SYKNGEEDQDHNAEHDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALS 541
            SY  GEED+D NAEH+LL+WKNELVRGVIDKAQFGK+GLVHTVQELYG++SAGI LSALS
Sbjct: 778  SYTRGEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGASSAGIFLSALS 837

Query: 542  RLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEGEDVGEEVHCDFVKFKPGQIGPEELQ 721
            R+FT+FLQ HGFTCGVDDLIILP++D QRKEKLEGEDVGE VHCDFVKFKPGQIGP+ELQ
Sbjct: 838  RVFTLFLQIHGFTCGVDDLIILPDYDDQRKEKLEGEDVGEVVHCDFVKFKPGQIGPDELQ 897

Query: 722  LEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTT 901
            LEIEK I +DRESATA+LDMKMKNKL ++LT EGSQILKHLLT GLLKPFPKNCISVMTT
Sbjct: 898  LEIEKVICTDRESATASLDMKMKNKLNSKLTREGSQILKHLLTAGLLKPFPKNCISVMTT 957

Query: 902  TGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGL 1081
            TGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWD+T+RAGGFITDRFL+GL
Sbjct: 958  TGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDFTSRAGGFITDRFLTGL 1017

Query: 1082 RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYY 1261
            RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLESLKVCYDYTVRD+DGSIVQFYY
Sbjct: 1018 RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLKVCYDYTVRDADGSIVQFYY 1077

Query: 1262 GEDGVDVHKTSFLKNFKALEDNRETIWQKFQNLREFNSYISELPEGLEEEARRFIHETHG 1441
            GEDG+DVH+TSFL NFKAL+DNRETI QKFQ+ REFNSYI +LPEGLEEEA+RFI ET  
Sbjct: 1078 GEDGIDVHRTSFLNNFKALQDNRETICQKFQHKREFNSYIKKLPEGLEEEAKRFIQETQN 1137

Query: 1442 NTSGKHNASS----EQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKYLTSLAESGEPV 1609
             +  K + S+        +              A  ++  FLELVKQKYL+SLA++GEPV
Sbjct: 1138 KSLAKQSTSAGEGPHSSRKARKKEKLLKKEKAAAAYEQDAFLELVKQKYLSSLAQAGEPV 1197

Query: 1610 GVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIKTPILTCPFSEV 1789
            GVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM+A   IKTP+LTCPFS+ 
Sbjct: 1198 GVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSASEVIKTPLLTCPFSQW 1257

Query: 1790 RSKRDVVALVTKVKKVSVADLLESMEVQLSINRRKVARTYKLKMKLKETEFVSSKDIKNT 1969
            RSKR+VV+LV+ VKKVSVADL+E+MEVQLS+N +  AR YKLKM LK+TEFVS +++  T
Sbjct: 1258 RSKREVVSLVSHVKKVSVADLIENMEVQLSVNHKTAARVYKLKMTLKDTEFVSLENMHET 1317

Query: 1970 LEGVFLKEMEAQIENHLIFLSKISGIKNF-MXXXXXXXXXXXXXXXXXGTRKXXXXXXXX 2146
            L+  FL E+E  IENH+++LS++SGIKNF                   GT          
Sbjct: 1318 LKTTFLGELEDAIENHVLYLSRLSGIKNFASNPKPKSSNEADEDESGLGTENAGVNDDDD 1377

Query: 2147 XXXXXXXXXXXT------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMDTS 2308
                       +      Q+ TD+M+Y + SD    ED+  +D +KG SD E+ E+ +T 
Sbjct: 1378 DDDDDKGDDLGSDVQKRKQQATDDMDYEDGSDGGAAEDD-DSDLEKGKSDVENLEEDETG 1436

Query: 2309 KDEEAEHSGKEDETRDEQNANE----------GSTRSKKT---------DAKIRRAVKHV 2431
            KDEE+EH+  +DE  + QN +E          GS++ K +           KIRRA   V
Sbjct: 1437 KDEESEHTDDKDEASNVQNEDEAISEGTKSSVGSSKGKTSFDKSSVELKGKKIRRAFYMV 1496

Query: 2432 FERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTM 2611
             + + FEVHF+F  EPH+L+AQ+AQKT++KV++++SG++SQC++V YDPDEKTVIW+++ 
Sbjct: 1497 VKGTKFEVHFEFHEEPHMLIAQLAQKTSKKVYIRKSGKVSQCKMVSYDPDEKTVIWDNSK 1556

Query: 2612 KPKRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAA 2791
            KPKRGE+K +   +D  YWA+KASG+DFKSFW+MH+DLDLSRLYSNN+HA+L TYGVEAA
Sbjct: 1557 KPKRGESKSE--EEDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNIHAMLTTYGVEAA 1614

Query: 2792 RATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFET 2971
            RAT+IREVK VFDIYGVKIDYRHLSLIAD+MTHTG Y PMSR GSISESLSPFLKMSFET
Sbjct: 1615 RATIIREVKHVFDIYGVKIDYRHLSLIADHMTHTGSYLPMSRHGSISESLSPFLKMSFET 1674

Query: 2972 ASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
            ASKFIVEAAS GL D+L+TPSSRICLGLPVK+GTG FD+MQ+L+
Sbjct: 1675 ASKFIVEAASHGLTDKLDTPSSRICLGLPVKMGTGSFDVMQQLD 1718


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score = 1307 bits (3383), Expect = 0.0
 Identities = 671/1065 (63%), Positives = 818/1065 (76%), Gaps = 31/1065 (2%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            YIVPTKGDTVRGLIQDHIV AV++TMKNTFLT  EF+QLLYGSGVFAAGP    G+ S K
Sbjct: 635  YIVPTKGDTVRGLIQDHIVGAVILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNK 694

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            VSVVD EG+V+++LPAVWKP+PLWTGKQVITALLNH+T+GCAPCTVKN+GK+P  YF S 
Sbjct: 695  VSVVDFEGVVQTVLPAVWKPKPLWTGKQVITALLNHLTKGCAPCTVKNKGKIPYPYFLSE 754

Query: 362  S----YKNGEEDQDHNAEHDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILL 529
            S    Y++ EE +D  AE++ LIWKNELVRGVIDKAQFGK+GLVHT+QELYGSN AGILL
Sbjct: 755  SRLVEYQSREEQEDRTAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILL 814

Query: 530  SALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEGEDVGEEVHCDFVKFKPGQIGP 709
            SALSRLFTIFLQ HGFTCGVDDL+ILP++D++RKE+LEG+DVGEE HCDFVKFK G+IGP
Sbjct: 815  SALSRLFTIFLQLHGFTCGVDDLVILPHYDIRRKEELEGDDVGEEAHCDFVKFKRGEIGP 874

Query: 710  EELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCIS 889
             ELQLEIEKA+SS++E+ATA LDMKMKNKL N+    GSQ  K LL KGLLKPFP+NCI+
Sbjct: 875  LELQLEIEKAMSSNKEAATAALDMKMKNKLANK----GSQFNKELLLKGLLKPFPRNCIA 930

Query: 890  VMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRF 1069
            +MT TGAKGSTVNFQQIS+YLGQQELEGKRVPRMVSGKTLP FPPWD  +RAGG+++DRF
Sbjct: 931  LMTITGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDCASRAGGYVSDRF 990

Query: 1070 LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIV 1249
            LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRD+DGSI+
Sbjct: 991  LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSII 1050

Query: 1250 QFYYGEDGVDVHKTSFLKNFKALEDNRETIWQKFQNLREFNSYISELPEGLEEEARRFIH 1429
            QFYYGEDGVDVH+TSFLKNFKAL++N+ETI QK ++ R+ NSYI +LP+GLEE+ + F  
Sbjct: 1051 QFYYGEDGVDVHRTSFLKNFKALKNNQETICQKLRHGRKLNSYIEKLPDGLEEKVKHFWE 1110

Query: 1430 ETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKYLTSLAESGEPV 1609
            +            +++L +                 +E  FLELV+QKY +SLA+SGEPV
Sbjct: 1111 K-----------RTKKLEKKLGKLVKKEEMVKQLKEEEADFLELVRQKYFSSLADSGEPV 1159

Query: 1610 GVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIKTPILTCPFSEV 1789
            GV+A QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA   IKTPILTCPF   
Sbjct: 1160 GVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEAIKTPILTCPFLGW 1219

Query: 1790 RSKRDVVALVTKVKKVSVADLLESMEVQ---LSINRRKVARTYKLKMKLKETEFVSSKDI 1960
            +SK D  +L+ KVKK++VAD++ESMEV+   LSI   +V++ YKL +KLK+ +FVSS+D 
Sbjct: 1220 QSKNDAQSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKHDFVSSEDC 1279

Query: 1961 KNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGTRKXXXXXX 2140
            + TL+ VFL+E+E  IE+HL  LSKI+GI+NF                     +      
Sbjct: 1280 EYTLKFVFLRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTRHEEEMLDD 1339

Query: 2141 XXXXXXXXXXXXXTQKK----TDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMDTS 2308
                          QK+    TDEM+Y ++ + D  E     + +K     E  +++D  
Sbjct: 1340 EDEDERTEDLSSDAQKRKQQTTDEMDYDDDENEDEAETTAEIEDEK----SEQTDEIDNG 1395

Query: 2309 KDEEAEHSGKEDETRDEQNANE--GSTRSKKTDAKIRRAVKH---------------VF- 2434
             +EE  + G E++    Q+  +   +T+S K+  K +  VK                VF 
Sbjct: 1396 DEEEIGNRGNEEQMSKLQSTEDDISNTKSSKSKTKTKTTVKQNKKKERRSKKDSDRCVFV 1455

Query: 2435 --ERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDT 2608
              E   FEVHF+F  EPH+LLAQ+AQKTA+KV++K SG++ QCR+V+Y+  E TV+W++ 
Sbjct: 1456 DVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRMVKYEVTENTVMWDEY 1515

Query: 2609 MKPKRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEA 2788
                  + K Q+   D+ YWA+KA+G+DF +FW+M +DLD++R+Y+NN+ A+LNTYGVEA
Sbjct: 1516 ------QTKQQSQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEA 1569

Query: 2789 ARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFE 2968
            ARA+++REVK VF IYGV+ID+RHLSLIAD+MTHTGGY+PMSR GSISESLSPFLKMSFE
Sbjct: 1570 ARASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFE 1629

Query: 2969 TASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
            TASKFIVEAA+ GL D LETPSSRICLGLPVK+GTGCFD+MQKL+
Sbjct: 1630 TASKFIVEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKLD 1674


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score = 1294 bits (3349), Expect = 0.0
 Identities = 665/1065 (62%), Positives = 812/1065 (76%), Gaps = 31/1065 (2%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            YIVPTKGDTVRGLIQDHIV AV++TMKNTFL+  EF+QLLYGSGVFAAGP    G+ S K
Sbjct: 635  YIVPTKGDTVRGLIQDHIVGAVILTMKNTFLSLHEFNQLLYGSGVFAAGPAPTSGNHSNK 694

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            VS+VD EG+V+++LPAVWKP+PLWTGKQVITALLNH+T GC PCTVKN+GK+P  YF S 
Sbjct: 695  VSIVDFEGVVQTVLPAVWKPKPLWTGKQVITALLNHLTNGCPPCTVKNKGKIPYAYFLSE 754

Query: 362  S----YKNGEEDQDHNAEHDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILL 529
            S    Y++ EE +D  AE++ LIWKNELVRGVIDKAQFGK+GLVHT+QELYGSN AGILL
Sbjct: 755  SRLVEYQSREEQEDRTAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILL 814

Query: 530  SALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEGEDVGEEVHCDFVKFKPGQIGP 709
            SALSRLFTIFLQ HGFTCG+DDL+ILP++D++RKE+LEG+DVGEE HCDFVKFK G+IGP
Sbjct: 815  SALSRLFTIFLQLHGFTCGIDDLVILPHYDIRRKEELEGDDVGEEAHCDFVKFKRGEIGP 874

Query: 710  EELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCIS 889
             ELQLEIEKAISS++E ATA LDMKMKNKL N+    GSQ  K LL KGLLKPFP+NCI+
Sbjct: 875  LELQLEIEKAISSNKEVATAALDMKMKNKLANK----GSQFNKELLLKGLLKPFPRNCIA 930

Query: 890  VMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRF 1069
            +MT TGAKGSTVNFQQIS+YLGQQELEGKRVPRMVSGKTLP FP WD  +RAGG+++DRF
Sbjct: 931  LMTITGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPAWDCASRAGGYVSDRF 990

Query: 1070 LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIV 1249
            LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRD+DGSI+
Sbjct: 991  LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSII 1050

Query: 1250 QFYYGEDGVDVHKTSFLKNFKALEDNRETIWQKFQNLREFNSYISELPEGLEEEARRFIH 1429
            QFYYGEDGVDVH+TSFLKNFKAL++N+ETI QK ++  + NSYI +LP+GL E+ + F  
Sbjct: 1051 QFYYGEDGVDVHRTSFLKNFKALKNNQETICQKLRHGCKLNSYIEKLPDGLGEKVKHF-- 1108

Query: 1430 ETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKYLTSLAESGEPV 1609
                       + +++L +                 +E  FLELV QKY +SLA+SGEPV
Sbjct: 1109 ---------WESKTKKLEKKLGMLVKKEEMVKQLKEEEADFLELVGQKYFSSLADSGEPV 1159

Query: 1610 GVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIKTPILTCPFSEV 1789
            GV+A QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA   IKTPI+TCPF   
Sbjct: 1160 GVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEAIKTPIMTCPFLGW 1219

Query: 1790 RSKRDVVALVTKVKKVSVADLLESMEVQ---LSINRRKVARTYKLKMKLKETEFVSSKDI 1960
            +SK D  +L+ KVKK++VAD++ESMEV+   LSI   +V++ YKL +KLK+ +FVSS+D 
Sbjct: 1220 KSKNDAQSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKHDFVSSEDC 1279

Query: 1961 KNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGTRKXXXXXX 2140
            + TL+ VFL+E+E  IE+HL  LSKI+GI+NF                    R+      
Sbjct: 1280 EYTLKFVFLRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTRREEEMLDD 1339

Query: 2141 XXXXXXXXXXXXXT------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMD 2302
                         +      Q+ TDEM+Y ++ D    E E +A+ +   S++ D  ++D
Sbjct: 1340 DDDDEDERTEDLSSDAQKRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKSEQTD--EID 1397

Query: 2303 TSKDEEAEHSGKEDETRDEQNANEGSTRSKKTDAKIRRAVKH---------------VF- 2434
               +EE    G E+ T   Q+  E  + +K + +K +  VK                VF 
Sbjct: 1398 NGDEEENGDRGNEEHTSKLQSTEEDISNTKTSKSKTKTTVKQKKKKERRSKKDSDRCVFV 1457

Query: 2435 --ERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDT 2608
              E   FEVHF+F  EPH+LLAQ+AQKTA+KV++K SG++ QCR+V+Y+  E TV+W++ 
Sbjct: 1458 DVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENTVMWDE- 1516

Query: 2609 MKPKRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEA 2788
                  + K Q    D+ YWA+KA+G+DF +FW+M +DLD++R+Y+NN+ A+LNTYGVEA
Sbjct: 1517 -----NQTKQQRQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEA 1571

Query: 2789 ARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFE 2968
            ARA+++REVK VF IYGV+ID+RHLSLIAD+MTHTGGY+PMSR GSISESLSPFLKMSFE
Sbjct: 1572 ARASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFE 1631

Query: 2969 TASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
            TASKFIVEAA+ GL D LETPSSRICLGLPVK+GTGCFD+MQ+L+
Sbjct: 1632 TASKFIVEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQELD 1676


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score = 1278 bits (3308), Expect = 0.0
 Identities = 663/1057 (62%), Positives = 799/1057 (75%), Gaps = 27/1057 (2%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            YIVPT+GDTVRGLIQDHIVAAVL+T+K TFLT SEF+QLLYGSGVFA G  S+  + S K
Sbjct: 597  YIVPTRGDTVRGLIQDHIVAAVLLTLKRTFLTCSEFNQLLYGSGVFALGRHSYVSNSSQK 656

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            VS    +GL+  ILPA+WKPEPLWTGKQVI+ALLNHITRG APC VKNQ K+P  YF   
Sbjct: 657  VSGHAPDGLINPILPAIWKPEPLWTGKQVISALLNHITRGFAPCIVKNQTKLPSTYFTDN 716

Query: 362  SYKNGEEDQDHNAEHDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALS 541
                 +ED+D NAE++ L+WKNELVRGVIDKAQFGK+GLVHTVQELYGS SAG LL+A S
Sbjct: 717  PAME-DEDEDQNAENNFLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSESAGNLLTAFS 775

Query: 542  RLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEGEDVGEEVHCDFVKFKPGQIGPEELQ 721
            RLFT+FLQ HGFTCGVDDL+ILP++D++RKEKLE EDVGEEVHCDF+ FKPGQIG EELQ
Sbjct: 776  RLFTMFLQIHGFTCGVDDLMILPDYDVKRKEKLEQEDVGEEVHCDFINFKPGQIGREELQ 835

Query: 722  LEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTT 901
            LEIEKAI  DRESATA LDMKMKNKLT +LTTEGSQ+LKHLLT GLLKPFP+NCISVMTT
Sbjct: 836  LEIEKAICRDRESATALLDMKMKNKLTMKLTTEGSQVLKHLLTDGLLKPFPQNCISVMTT 895

Query: 902  TGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGL 1081
            TGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWD+ +RAGGFITDRFLSGL
Sbjct: 896  TGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDFASRAGGFITDRFLSGL 955

Query: 1082 RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYY 1261
            RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLESLKV YDYTVRD+DGSI+QF Y
Sbjct: 956  RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLKVGYDYTVRDADGSIIQFCY 1015

Query: 1262 GEDGVDVHKTSFLKNFKALEDNRETIWQKFQNLREFNSYISELPEGLEEEARRFIHETHG 1441
            GEDGVD HKTSFLKNFKAL +N+ETI QKFQN  +FN YI +LPEGLEEEA  FI +   
Sbjct: 1016 GEDGVDAHKTSFLKNFKALSNNQETIQQKFQNKHQFNFYIKKLPEGLEEEAMHFIQKAQT 1075

Query: 1442 NTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKYLTSLAESGEPVGVIA 1621
             +S K      +                        F+ +V+QK+L+SL  +GEPVGVIA
Sbjct: 1076 LSSVKQVVDHHK------------------------FMRVVEQKFLSSLVPAGEPVGVIA 1111

Query: 1622 AQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKR 1801
            AQS+GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA   I+TP+LTCPF + +SK 
Sbjct: 1112 AQSIGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEVIRTPMLTCPFLQRQSKP 1171

Query: 1802 DVVALVTKVKKVSVADLLESMEVQLSINRRKVARTYKLKMKLKETEFVSSKDIKNTLEGV 1981
            + +++++ +KK+++ADL+ESM+V +S +  KV R YKL+M+LK+TEFVS +D   TL+  
Sbjct: 1172 NALSVISNLKKITIADLIESMDVSISFH-PKVGRIYKLRMRLKDTEFVSLEDTYKTLKTS 1230

Query: 1982 FLKEMEAQIENHLIFLSKISGIKNF-MXXXXXXXXXXXXXXXXXGTRKXXXXXXXXXXXX 2158
            FLKE+E  +ENH++FL K++ I +F                   G ++            
Sbjct: 1231 FLKELEDALENHVVFLKKVAVINDFASHSRFEALSEGEEDKASDGAQEAEEEGDDDGGDS 1290

Query: 2159 XXXXXXXT------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMDTSKDEE 2320
                   +      Q+  D+M+Y + SD +  E+E   D K  A +++D ++ + ++  +
Sbjct: 1291 DAGEDLDSDVQKRRQQARDDMDYEDASDSEQREEEEDLD-KANAEEDDDDDENEWNEKCD 1349

Query: 2321 AEHSGKEDETRDEQNANEGSTRSKK------------------TDAKIRRAVKHVFERSS 2446
             +H   +  + ++    +   + +K                  T  +  RA+    E  S
Sbjct: 1350 DDHDDYDQRSSEKNMVEKPILKGRKKSVAAITSEKIDLSTMPSTGKRENRAIYMEIEGLS 1409

Query: 2447 FEVHFKFTTEPHVLLAQIAQKTAQKVFLKRS-GEMSQCRLVQYDPDEKTVIWNDTMKPKR 2623
             EVHFKFT+EPHVLLAQ+ QKTA+KV++K++ G+++QC+LVQYDPDEKTVIW+D  K ++
Sbjct: 1410 LEVHFKFTSEPHVLLAQVVQKTAKKVYVKKTGGKLNQCKLVQYDPDEKTVIWDDDKKKEK 1469

Query: 2624 GENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATL 2803
                 +   DDA YWA+KASG D +SFW+M + LDL+RLY NN+H++L TYGVEAA AT+
Sbjct: 1470 ATKNGRKADDDAAYWAVKASGSDVESFWEMSDYLDLNRLYCNNIHSMLKTYGVEAASATI 1529

Query: 2804 IREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKF 2983
            IRE+K VFDIYGVKIDYRHLSLI D+M H GGYRPMSR GSI +S+SPFLKMSFETASKF
Sbjct: 1530 IREMKNVFDIYGVKIDYRHLSLIGDHMAHAGGYRPMSRHGSIPDSVSPFLKMSFETASKF 1589

Query: 2984 IVEAASMGLADELETPSSRICLGLPVKVGT-GCFDLM 3091
            IVEAA  GL D+LE+PSSRICLGLPV+VGT G FDLM
Sbjct: 1590 IVEAAIYGLRDDLESPSSRICLGLPVRVGTGGPFDLM 1626


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1097 bits (2836), Expect = 0.0
 Identities = 600/1079 (55%), Positives = 753/1079 (69%), Gaps = 45/1079 (4%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            YIVP++GD +RGLIQDHIV+AVL+T K+TFLTR +++QLLY SG+ ++G GS  G    K
Sbjct: 628  YIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGL-SSGSGSFIGKPGKK 686

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            VSV+DSE  ++ +LPA+WKPEPLW+GKQVITA+LNHITRG  P T +  GK+P+ YF S 
Sbjct: 687  VSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSE 746

Query: 362  -----SYKNGEEDQDH---------NAEHDLLIWKNELVRGVIDKAQFGKYGLVHTVQEL 499
                 S K  +   D          + E+ LLI KNELVRGVIDKAQF KYGLVH VQEL
Sbjct: 747  IDEKKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQEL 806

Query: 500  YGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLE-GEDVGEEVHCD 676
            YGSN+AGILLS LSRLFT+FLQ HGFTCGVDDL+I PN+D+ RK +L+  E++GE VHC 
Sbjct: 807  YGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCK 866

Query: 677  FVKFKPGQIGPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKG 856
            F+    G+I P +LQ+E+EK I S+ E+A   LD  MKN+L N LT   S++ K LL KG
Sbjct: 867  FIGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNEL-NELT---SKVNKDLLLKG 922

Query: 857  LLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYT 1036
            L+KPFPKNC+S+MTTTGAKGSTVNF QIS++LGQQ+LEGKRVPRMVSGKTLP FPPWD  
Sbjct: 923  LVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCA 982

Query: 1037 ARAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYD 1216
            ARAGGFI+DRFL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKVCYD
Sbjct: 983  ARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYD 1042

Query: 1217 YTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQKFQNLREFNSYISELPE 1396
            YTVRDSDGSIVQF YG+DGVDVH+TSF+  F+AL  N E + +KF    +FN YI +LP+
Sbjct: 1043 YTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPK 1102

Query: 1397 GLEEEARRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKY 1576
             L ++ ++FI           N                         K++ F+ LVKQKY
Sbjct: 1103 ELRKKTKKFIEGFMEERQDFDN-----------------------MKKQKDFVNLVKQKY 1139

Query: 1577 LTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIK 1756
            ++SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA   IK
Sbjct: 1140 ISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIK 1199

Query: 1757 TPILTCPFSEVRSKRDVVALVTKVKKVSVADLLESMEVQL---SINRRKVARTYKLKMKL 1927
            TPI+TCP    RSK D   L  K+KKV+VAD+ ESMEV +   ++   +    YKLKMKL
Sbjct: 1200 TPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKL 1259

Query: 1928 KETEF------VSSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKNFM-------XXX 2068
             E         +S +D + TLE VF++E+E  I+NHL+ LSKISGIKNF+          
Sbjct: 1260 YEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKE 1319

Query: 2069 XXXXXXXXXXXXXXGTRKXXXXXXXXXXXXXXXXXXXTQKKTDEMNYGNESDVDHCEDEL 2248
                          G                       Q+ +DEM+YG +S+ +  E E 
Sbjct: 1320 TDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYG-DSEGEPDEGEP 1378

Query: 2249 SADTKKGASDEED--HEDMDTSKDEEAEHSGKEDETRDEQNANEGSTRSK-KTDAKIR-- 2413
            SA    G ++E D   ++++ S +EE   S  +DE     + ++ S   K KT+AK +  
Sbjct: 1379 SA----GLTEEIDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKR 1434

Query: 2414 -RAVKHVFER--------SSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLV 2566
             RA+K  F+R        + FEVHF+FT EPH+LLAQIAQK A KV+++ SG++  C+++
Sbjct: 1435 FRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVI 1494

Query: 2567 QYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYS 2746
              + D+      D   PK+ EN P  G +     A++ +G+DF +FW M ++LD+  +YS
Sbjct: 1495 DCNKDQVIYYGRD---PKKRENIP--GEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYS 1549

Query: 2747 NNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGS 2926
            NNVHA+LNT+GVEAARAT+I+EV  VF+ YGVK++ RHLSLIAD+MTH+GGYRPM+R G 
Sbjct: 1550 NNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGG 1609

Query: 2927 ISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
            I+ES+SPF KM+FETASKFIVEAAS G+ D LE+ S+RICLGLPVK+GTGCFDLMQK+E
Sbjct: 1610 IAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIE 1668


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score = 1097 bits (2836), Expect = 0.0
 Identities = 600/1079 (55%), Positives = 753/1079 (69%), Gaps = 45/1079 (4%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            YIVP++GD +RGLIQDHIV+AVL+T K+TFLTR +++QLLY SG+ ++G GS  G    K
Sbjct: 699  YIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGL-SSGSGSFIGKPGKK 757

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            VSV+DSE  ++ +LPA+WKPEPLW+GKQVITA+LNHITRG  P T +  GK+P+ YF S 
Sbjct: 758  VSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSE 817

Query: 362  -----SYKNGEEDQDH---------NAEHDLLIWKNELVRGVIDKAQFGKYGLVHTVQEL 499
                 S K  +   D          + E+ LLI KNELVRGVIDKAQF KYGLVH VQEL
Sbjct: 818  IDEKKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQEL 877

Query: 500  YGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLE-GEDVGEEVHCD 676
            YGSN+AGILLS LSRLFT+FLQ HGFTCGVDDL+I PN+D+ RK +L+  E++GE VHC 
Sbjct: 878  YGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCK 937

Query: 677  FVKFKPGQIGPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKG 856
            F+    G+I P +LQ+E+EK I S+ E+A   LD  MKN+L N LT   S++ K LL KG
Sbjct: 938  FIGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNEL-NELT---SKVNKDLLLKG 993

Query: 857  LLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYT 1036
            L+KPFPKNC+S+MTTTGAKGSTVNF QIS++LGQQ+LEGKRVPRMVSGKTLP FPPWD  
Sbjct: 994  LVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCA 1053

Query: 1037 ARAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYD 1216
            ARAGGFI+DRFL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKVCYD
Sbjct: 1054 ARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYD 1113

Query: 1217 YTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQKFQNLREFNSYISELPE 1396
            YTVRDSDGSIVQF YG+DGVDVH+TSF+  F+AL  N E + +KF    +FN YI +LP+
Sbjct: 1114 YTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPK 1173

Query: 1397 GLEEEARRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKY 1576
             L ++ ++FI           N                         K++ F+ LVKQKY
Sbjct: 1174 ELRKKTKKFIEGFMEERQDFDN-----------------------MKKQKDFVNLVKQKY 1210

Query: 1577 LTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIK 1756
            ++SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA   IK
Sbjct: 1211 ISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIK 1270

Query: 1757 TPILTCPFSEVRSKRDVVALVTKVKKVSVADLLESMEVQL---SINRRKVARTYKLKMKL 1927
            TPI+TCP    RSK D   L  K+KKV+VAD+ ESMEV +   ++   +    YKLKMKL
Sbjct: 1271 TPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKL 1330

Query: 1928 KETEF------VSSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKNFM-------XXX 2068
             E         +S +D + TLE VF++E+E  I+NHL+ LSKISGIKNF+          
Sbjct: 1331 YEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKE 1390

Query: 2069 XXXXXXXXXXXXXXGTRKXXXXXXXXXXXXXXXXXXXTQKKTDEMNYGNESDVDHCEDEL 2248
                          G                       Q+ +DEM+YG +S+ +  E E 
Sbjct: 1391 TDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYG-DSEGEPDEGEP 1449

Query: 2249 SADTKKGASDEED--HEDMDTSKDEEAEHSGKEDETRDEQNANEGSTRSK-KTDAKIR-- 2413
            SA    G ++E D   ++++ S +EE   S  +DE     + ++ S   K KT+AK +  
Sbjct: 1450 SA----GLTEEIDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKR 1505

Query: 2414 -RAVKHVFER--------SSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLV 2566
             RA+K  F+R        + FEVHF+FT EPH+LLAQIAQK A KV+++ SG++  C+++
Sbjct: 1506 FRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVI 1565

Query: 2567 QYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYS 2746
              + D+      D   PK+ EN P  G +     A++ +G+DF +FW M ++LD+  +YS
Sbjct: 1566 DCNKDQVIYYGRD---PKKRENIP--GEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYS 1620

Query: 2747 NNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGS 2926
            NNVHA+LNT+GVEAARAT+I+EV  VF+ YGVK++ RHLSLIAD+MTH+GGYRPM+R G 
Sbjct: 1621 NNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGG 1680

Query: 2927 ISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
            I+ES+SPF KM+FETASKFIVEAAS G+ D LE+ S+RICLGLPVK+GTGCFDLMQK+E
Sbjct: 1681 IAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIE 1739


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1022 bits (2642), Expect = 0.0
 Identities = 575/1089 (52%), Positives = 720/1089 (66%), Gaps = 55/1089 (5%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            ++ P+ G+ +RGLIQDHIV+AVL+T K+TFL++ EF+QLLY SGV   GP S  G    K
Sbjct: 628  FVRPSNGEPLRGLIQDHIVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQK 687

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            V    SE  ++++ PA+WKP+PLWTGKQVITA+LNHIT    P TV+   K+P N+F S 
Sbjct: 688  VLWSRSEDEIQTLPPAIWKPKPLWTGKQVITAILNHITSDHPPFTVEKDAKIPSNFFKSR 747

Query: 362  SYKNG---EEDQDHNA-------EHDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSN 511
            + ++    EE  D +A       E  +L++KNELVRGVIDK QFG+YGLVHTV EL GS+
Sbjct: 748  ANEDKPCQEEKSDKDAPAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSH 807

Query: 512  SAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG-EDVGEEVHCDFVKF 688
            +AGILLS LSRLFT +LQ HGFTCGVDDL+IL N D +RK++LE  E  GE VH +F+  
Sbjct: 808  TAGILLSVLSRLFTAYLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGI 867

Query: 689  KPGQI--GPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLL 862
            K  +I   P  +QL IEK I SD +SA A LD +M N+L    T   S ++ +LL+ GLL
Sbjct: 868  KDEKIKIDPVAMQLNIEKTIRSDGDSALAYLDRQMSNELN---TKTSSGVISNLLSDGLL 924

Query: 863  KPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTAR 1042
            KP  KNCIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP F PWD+ AR
Sbjct: 925  KPSGKNCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAAR 984

Query: 1043 AGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYT 1222
            +GG+ITDRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK+ YD+T
Sbjct: 985  SGGYITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHT 1044

Query: 1223 VRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQKF-QNLREFNSYISELPEG 1399
            VRD+DGS+VQFYYGEDGVDVH+TSF+  FK L  N++ I+++    L  FNSYISELPE 
Sbjct: 1045 VRDADGSVVQFYYGEDGVDVHQTSFIAKFKELALNQDMIYKRSGGQLGAFNSYISELPEA 1104

Query: 1400 LEEEARRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKYL 1579
            L+E+A RF+ +   +  G+  ++                       K      L+KQK+L
Sbjct: 1105 LKEKADRFLDDF--SIMGRIASN---------------------LVKREDLYNLMKQKFL 1141

Query: 1580 TSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIKT 1759
             SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA   IKT
Sbjct: 1142 LSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIKT 1201

Query: 1760 PILTCPFSEVRSKRDVVALVTKVKKVSVADLLESMEVQL---SINRRKVARTYKLKMKL- 1927
            PI+TCP  E R+  D   L  K++KV+VAD++ESMEV +   +I    V R YKLKMKL 
Sbjct: 1202 PIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLY 1261

Query: 1928 -----KETEFVSSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXXXXXXXXXXX 2092
                  +   +S +D + TLE VFL+E+E  I+NH+  LS+ISGIK+F+           
Sbjct: 1262 RPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEA 1321

Query: 2093 XXXXXXG---TRKXXXXXXXXXXXXXXXXXXXTQKK----TDEMNYG-------NESDVD 2230
                        +                    QK+    TDEM+Y        NE +  
Sbjct: 1322 DEDVAGDMSHREERDDDNDDDDGERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGEST 1381

Query: 2231 HCEDELSADTKKGASDEEDHEDMDTSKDEEAEHS----------GKEDETRDEQNANEGS 2380
              E+E   +++    D E     D   D EA  +           K+       +  +  
Sbjct: 1382 ASEEESGFESEIDQGDNETEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSK 1441

Query: 2381 TRSKKTDAKIRRAVKHVFERS--------SFEVHFKFTTEPHVLLAQIAQKTAQKVFLKR 2536
             + KK  AK +  +   F+R+         FEVHFKFT EPH+LLA+IAQKTA+KV+++ 
Sbjct: 1442 DKKKKPKAKRKSRISKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQN 1501

Query: 2537 SGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGIDFKSFWDMH 2716
             G++ QCR+   D  E  VI+      +R + KP          A+ A+G+DF +FW M 
Sbjct: 1502 PGKIEQCRVT--DCKESQVIYYGKDPKERVDLKPDVKEKVP---ALHATGVDFNTFWKMQ 1556

Query: 2717 EDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTG 2896
            + LD+  +YSNN+HA+L TYGVEAAR T+IRE+  VF  YG+ +  RHLSLIAD+MTHTG
Sbjct: 1557 DHLDVRYIYSNNIHAMLKTYGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTG 1616

Query: 2897 GYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKVGTG 3076
            GYRPMSR G I+ES+SPF KMSFETASKFIVEAA  G  D LETPS+RICLGLPVK+GTG
Sbjct: 1617 GYRPMSRMGGIAESISPFSKMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTG 1676

Query: 3077 CFDLMQKLE 3103
             FDLMQKLE
Sbjct: 1677 SFDLMQKLE 1685


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  995 bits (2573), Expect = 0.0
 Identities = 543/1075 (50%), Positives = 715/1075 (66%), Gaps = 41/1075 (3%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ PT G+ +R LIQDHI++AVL+T K+TFL   EFSQLLY SG+  +   +       K
Sbjct: 607  YVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQK 666

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            +  +D +  +  +LPAVWKPEPLWTGKQV+TALL+HIT+G  P  V+   K+P+ +F   
Sbjct: 667  IFTLDFDAEMLPVLPAVWKPEPLWTGKQVVTALLDHITQGSPPFFVEKDVKIPRGFFKCR 726

Query: 362  SYKNGEEDQDHNAEHD-----------LLIWKNELVRGVIDKAQFGKYGLVHTVQELYGS 508
               N    +  + + D           LLI+KNELVRGVIDKAQFG YGLVHTVQELYGS
Sbjct: 727  DMGNNSSKKKEHTKVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGS 786

Query: 509  NSAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLE-GEDVGEEVHCDFVK 685
            N+AG+LLS +SRLFT+FLQ HGFTCGVDDL+++   D +R+++L+  E +GE+VH  F+K
Sbjct: 787  NTAGLLLSVMSRLFTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLK 846

Query: 686  FKPGQ-IGPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLL 862
             K G+ + P  LQL IEK IS + E+A  +LD KM ++L  R  T  S++LK LL++GLL
Sbjct: 847  VKDGEKLDPMTLQLNIEKTISYNGEAALTSLDRKMTSQLNER--TGNSKVLKDLLSEGLL 904

Query: 863  KPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTAR 1042
            KP  KNCIS+MTT+GAKG T NFQQIS++LGQQ+LEGKRVPRMVSGKTLP FPPWD+ +R
Sbjct: 905  KPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASR 964

Query: 1043 AGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYT 1222
            AGGFI DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLK+CYD+T
Sbjct: 965  AGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHT 1024

Query: 1223 VRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQ-KFQNLREFNSYISELPEG 1399
            VRD+DGS++QF YGEDGVDVHKT+F+  F+AL  N++ +++     L ++N +I+ELP  
Sbjct: 1025 VRDADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSHHQLGKYNVFINELPSA 1084

Query: 1400 LEEEARRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKYL 1579
            L E+   FI+    N+  K       L                    +  F+ L++ KYL
Sbjct: 1085 LREKG-EFIY----NSLSKDKVPGLVL--------------------KEDFIRLLENKYL 1119

Query: 1580 TSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIKT 1759
            +SLA+ GEPVGV+AAQS+GEPSTQMTLNTFH  GRGEMNVTLGI RLQEILMTA   IKT
Sbjct: 1120 SSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHVGRGEMNVTLGILRLQEILMTASQDIKT 1179

Query: 1760 PILTCPFSEVRSKRDVVALVTKVKKVSVADLLESMEVQL---SINRRKVARTYKLKMKLK 1930
            PI+TCP  E  S      L  K+KK++VAD++ESM V +   S  +R++   YKL++   
Sbjct: 1180 PIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFY 1239

Query: 1931 ETE------FVSSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXXXXXXXXXXX 2092
              E       +S +D++NTLE VFL+E+E  IE  ++ LSKI+GIKNF+           
Sbjct: 1240 PLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKNFVPDSQSKGSSEG 1299

Query: 2093 XXXXXXGTRKXXXXXXXXXXXXXXXXXXXTQKK-----TDEMNYGNESDVDHCEDELS-- 2251
                    ++                     KK      DEM+Y ++S+ D    E S  
Sbjct: 1300 DEVSSSRQKENDDDDDEGNDLDVAEDLGSDMKKQKLQANDEMDYEDDSEDDLNAKESSTG 1359

Query: 2252 --ADTKKGASDEEDHEDMDTSKDEEAEHSGKEDETRDEQNANEGSTRSKKTDAKIR---- 2413
              ++  +G   E  + DM     + A  +  E     +  + E +T + K   K++    
Sbjct: 1360 FESEVDQGDEAEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVKSELV 1419

Query: 2414 -----RAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDP 2578
                 R++    + + FEVHFKFT EPH LL+QI Q+ AQKV ++RSG++ QC+  Q   
Sbjct: 1420 RKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQ--QITC 1477

Query: 2579 DEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVH 2758
             E  VI++     +R   KP+   +     A++ SG+DFK+ W+M ++LD+  +YSN++H
Sbjct: 1478 KEGQVIYHGNNLKERKNLKPE---EKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIH 1534

Query: 2759 AVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISES 2938
            A+L TYGVEAARAT+IRE++ +F  YG+ ++ RHLSL+ADYMTH+GGYRPMSR G IS+S
Sbjct: 1535 AMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDS 1594

Query: 2939 LSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
            +SPF +M+FETA KFIV+AA  G  D LETPSSRICLGLPVK+GTG FDLMQK+E
Sbjct: 1595 ISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKIE 1649


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  992 bits (2565), Expect = 0.0
 Identities = 544/1071 (50%), Positives = 718/1071 (67%), Gaps = 37/1071 (3%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ PT G+ +R LIQDHI++AVL+T K+TFL   EFSQLLY SG+  +   +       K
Sbjct: 613  YVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQK 672

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFA-- 355
            +  +D +  +  +LPAVWKPEPLWTGKQV+TALL+HIT+G  P  V+   K+P+ +    
Sbjct: 673  IFTLDFDAEMLPVLPAVWKPEPLWTGKQVVTALLDHITQGSPPFFVEKDVKIPRGFLILD 732

Query: 356  ---SASYKNGEEDQDHNAEHD---LLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSA 517
               S   ++ + D+   A  D   LLI+KNELVRGVIDKAQFG YGLVHTVQELYGSN+A
Sbjct: 733  EGNSKKKEHTKVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTA 792

Query: 518  GILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLE-GEDVGEEVHCDFVKFKP 694
            G+LLS +SRLFT+FLQ HGFTCGVDDL+++   D +R+++L+  E +GE+VH  F+K K 
Sbjct: 793  GLLLSVMSRLFTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKD 852

Query: 695  GQ-IGPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPF 871
            G+ + P  LQL IEK IS + E+A  +LD KM ++L  R  T  S++LK LL++GLLKP 
Sbjct: 853  GEKLDPMTLQLNIEKTISYNGEAALTSLDRKMTSQLNER--TGNSKVLKDLLSEGLLKPS 910

Query: 872  PKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGG 1051
             KNCIS+MTT+GAKG T NFQQIS++LGQQ+LEGKRVPRMVSGKTLP FPPWD+ +RAGG
Sbjct: 911  VKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGG 970

Query: 1052 FITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRD 1231
            FI DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLK+CYD+TVRD
Sbjct: 971  FIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRD 1030

Query: 1232 SDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQ-KFQNLREFNSYISELPEGLEE 1408
            +DGS++QF YGEDGVDVHKT+F+  F+AL  N++ +++     L ++N +I+ELP  L E
Sbjct: 1031 ADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSHHQLGKYNVFINELPSALRE 1090

Query: 1409 EARRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKYLTSL 1588
            +   FI+    N+  K       L                    +  F+ L++ KYL+SL
Sbjct: 1091 KG-EFIY----NSLSKDKVPGLVL--------------------KEDFIRLLENKYLSSL 1125

Query: 1589 AESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIKTPIL 1768
            A+ GEPVGV+AAQS+GEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILMTA   IKTPI+
Sbjct: 1126 AQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIM 1185

Query: 1769 TCPFSEVRSKRDVVALVTKVKKVSVADLLESMEVQL---SINRRKVARTYKLKMKLKETE 1939
            TCP  E  S      L  K+KK++VAD++ESM V +   S  +R++   YKL++     E
Sbjct: 1186 TCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFYPLE 1245

Query: 1940 ------FVSSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXX 2101
                   +S +D++NTLE VFL+E+E  IE  ++ LSKI+GIK F+              
Sbjct: 1246 NNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKXFVPDSQSKGSSEGDEV 1305

Query: 2102 XXXGTRKXXXXXXXXXXXXXXXXXXXTQKK----TDEMNYGNESDVDHCEDELS----AD 2257
                  +                    +K+     DEM+Y ++S+ D    E S    ++
Sbjct: 1306 SSSRQEEMDDDDEGNDLDVAEDLGSDXEKQKLQANDEMDYEDDSEDDLNAKESSTGFESE 1365

Query: 2258 TKKGASDEEDHEDMDTSKDEEAEHSGKEDETRDEQNANEGSTRSKKTDAKIR-------- 2413
              +G   E  + DM     + A  +  E     +  + E +T + K   K++        
Sbjct: 1366 VDQGDEAEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVKSELVRKET 1425

Query: 2414 -RAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKT 2590
             R++    + + FEVHFKFT EPH LL+QI Q+ AQKV ++RSG++ QC+  Q    E  
Sbjct: 1426 DRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQ--QITCKEGQ 1483

Query: 2591 VIWNDTMKPKRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLN 2770
            VI++     +R   KP+   +     A++ SG+DFK+ W+M ++LD+  +YSN++HA+L 
Sbjct: 1484 VIYHGNNLKERKNLKPE---EKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQ 1540

Query: 2771 TYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPF 2950
            TYGVEAARAT+IRE++ +F  YG+ ++ RHLSL+ADYMTH+GGYRPMSR G IS+S+SPF
Sbjct: 1541 TYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPF 1600

Query: 2951 LKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
             +M+FETA KFIV+AA  G  D LETPSSRICLGLPVK+GTG FDLMQK+E
Sbjct: 1601 SRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKIE 1651


>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
            gi|462398594|gb|EMJ04262.1| hypothetical protein
            PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  984 bits (2545), Expect = 0.0
 Identities = 549/1105 (49%), Positives = 717/1105 (64%), Gaps = 71/1105 (6%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ PT GD +R LIQDH+++AVL+T K+TFL   +F+QLLY S V A    +  G    K
Sbjct: 538  YVKPTSGDPIRALIQDHVISAVLLTKKDTFLRWDQFNQLLYSSCVSARVSDAFSGKPDKK 597

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYF--- 352
            V + +SEG ++ +LPA+WKPEPLWTGKQVITALLNHITRG  P TV+   K+P+ +F   
Sbjct: 598  VFMFNSEGTMQPLLPAIWKPEPLWTGKQVITALLNHITRGSPPVTVERDAKIPRGFFNCK 657

Query: 353  ---------------------ASASYKNGEEDQDHNAEHDLLIWKNELVRGVIDKAQFGK 469
                                   A+ K+  ++++   E+ LLI++N LVRGVIDKAQFG 
Sbjct: 658  NVEGEDKSGNDGQQKKRKPSKEQATDKDSSKEKEEPDENHLLIYRNNLVRGVIDKAQFGD 717

Query: 470  YGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG- 646
            YGLVHTVQE YGS++AG LLS LS LFT++LQ HGFTCG+DDL++L + D + K++LE  
Sbjct: 718  YGLVHTVQEFYGSDTAGKLLSVLSHLFTVYLQMHGFTCGIDDLLLLESKDAKMKDQLESC 777

Query: 647  EDVGEEVHCDFVKFKP-GQIGPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEG 823
            EDVGE V+ DF++ K   +  P ELQL IE  I S+ ESA A+LD +M ++L N+  T  
Sbjct: 778  EDVGENVYRDFIEVKDVKRKDPVELQLNIENFIRSNGESALASLDRRMISQLNNK--TSN 835

Query: 824  SQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGK 1003
            S + K LL +GL KP  KNCI +MTT+GAKGS  N QQI++YLGQQELEGKRVP+M+SGK
Sbjct: 836  SDVFKQLLLRGLSKPSVKNCIYLMTTSGAKGSVANLQQITSYLGQQELEGKRVPQMISGK 895

Query: 1004 TLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLI 1183
            TLP FPPWD+++RAGGFI DRFL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRC+I
Sbjct: 896  TLPCFPPWDWSSRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCII 955

Query: 1184 KNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQKFQN-L 1360
            KNLE LKV YD TVRD+DGSI+QF YGEDG+DVH TSF++ F++L  N+E   +K +  +
Sbjct: 956  KNLECLKVSYDNTVRDADGSIIQFRYGEDGIDVHMTSFIQKFESLIANKEMFHKKGRRQM 1015

Query: 1361 REFNSYISELPEGLEEEARRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTK 1540
             + N YI +LP  L+E+A +F+H          N + ++   N                 
Sbjct: 1016 DKLNPYIKDLPLALKEKAEKFVH----------NLALKEKDHNF---------------- 1049

Query: 1541 ERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRL 1720
            +  FL+L++ KYL SLA+ GEPVGV+A QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRL
Sbjct: 1050 QEDFLKLMEHKYLCSLAQPGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRL 1109

Query: 1721 QEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKVSVADLLESME---VQLSINRR 1891
            QEILMTA   IKTP++TCP  + RSK +   L  K+KK++VAD++ESM+   V   I   
Sbjct: 1110 QEILMTAANDIKTPVMTCPLQKGRSKEEAQELADKLKKITVADIIESMKVTFVPFFIQDG 1169

Query: 1892 KVARTYKLKMKLKETEFV------SSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKN 2053
            +  R YKL+M L   E +      SS+D +  LE VF++E+E  I+NH++ LSKISGIKN
Sbjct: 1170 QTCRIYKLEMTLHVPEHLRTIIEYSSEDWEEILEIVFVRELEDAIQNHILLLSKISGIKN 1229

Query: 2054 FMXXXXXXXXXXXXXXXXXGTRKXXXXXXXXXXXXXXXXXXXTQ-----------KKTDE 2200
            F                     +                    +           + TDE
Sbjct: 1230 FTPDSQPKASNETDENLPEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDE 1289

Query: 2201 MNY---------------GNESDVDHCED--ELSADTKKGASDEEDHEDMDTSKDEE--- 2320
            M+Y               G+ES++D  E+  E+  D + G  D  D  +M  S  EE   
Sbjct: 1290 MDYEDGCDDEVREADLSDGDESEIDEEENEVEIGKDGEIGVIDAND--EMPGSPLEEAGD 1347

Query: 2321 -AEHSGKEDETRD-EQNANEGSTRSKKTDAKIRRAVKHVFERSSFEVHFKFT-TEPHVLL 2491
             A+   KE +T+   Q   +   R++    +  RA+    +   FEVHF+F   EPH+LL
Sbjct: 1348 LAKPKSKEKKTKSGSQIRKKRKVRAEMVKKETDRAIFVSAKGFHFEVHFRFADNEPHILL 1407

Query: 2492 AQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYW- 2668
            +QIAQKTAQKV+++RSG+++ C+ +  D ++      D       ENK    + +     
Sbjct: 1408 SQIAQKTAQKVYIQRSGKVADCKQITCDENQVLCFGKDP------ENKQSFSSKEKKEMP 1461

Query: 2669 AMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKI 2848
            A++ +GIDF +FW + + LD+  +YSNN+HA+LNTYGVEAAR T+IRE+  VF  YG+ +
Sbjct: 1462 ALQTTGIDFGTFWQLQDVLDVRYIYSNNIHAMLNTYGVEAARETIIREINNVFKSYGISV 1521

Query: 2849 DYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELET 3028
            + RHL+LIAD+MTH GGYRP++R G I ES+SPF KM+FETASKFIVEAA  G  D LET
Sbjct: 1522 NIRHLTLIADFMTHAGGYRPLNRFGGIVESISPFNKMTFETASKFIVEAAYHGQVDRLET 1581

Query: 3029 PSSRICLGLPVKVGTGCFDLMQKLE 3103
            PS+RICLGLPV VGTGCFDLM K+E
Sbjct: 1582 PSARICLGLPVNVGTGCFDLMHKME 1606


>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
            gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
            isoform 3 [Theobroma cacao]
          Length = 1400

 Score =  981 bits (2536), Expect = 0.0
 Identities = 551/1094 (50%), Positives = 711/1094 (64%), Gaps = 60/1094 (5%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ P+ G+ +R LIQDHIV+AVL+T ++TFL+R EF+QLLY SGV +    S  G    K
Sbjct: 343  YVRPSNGEPIRALIQDHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQK 402

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            V V  SE  +  I+PA+ KP+PLWTGKQVI+++L+HITRG  P TV    K+P+++F + 
Sbjct: 403  VFVSTSEEGMLPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDFFRNR 462

Query: 362  SYKNGEEDQDHNA--------------------EHDLLIWKNELVRGVIDKAQFGKYGLV 481
              KN +  ++ N                     E  +LI++N+LVRGVIDKAQF  YGLV
Sbjct: 463  RNKNKQSSREENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLV 522

Query: 482  HTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG-EDVG 658
            HTVQELYGSN+AGILLS  SRLFT+FLQ HGFTCGVDDL+I+ + D++RK++LE  E   
Sbjct: 523  HTVQELYGSNTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKV 582

Query: 659  EEVHCDFVKFKPG-QIGPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQIL 835
             E H +    K   +  P ELQLEIE+ I  D E+A   LD KM + L N  +++G  +L
Sbjct: 583  TEAHYELFGVKVNSETAPTELQLEIERTIRRDGETALTALDRKMISVL-NENSSKG--VL 639

Query: 836  KHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPS 1015
              LL++GL+K   +NCIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP 
Sbjct: 640  TELLSEGLVKSMGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPC 699

Query: 1016 FPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 1195
            F PWD+ ARAGGFI+DRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE
Sbjct: 700  FHPWDWAARAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 759

Query: 1196 SLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQKF-QNLREFN 1372
             LK+ YD+TVRD+DGSIVQF YGEDG+DVH+TSF+  F+AL  N++ + +K    L E +
Sbjct: 760  CLKISYDHTVRDADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGEPD 819

Query: 1373 SYISELPEGLEEEARRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGF 1552
                 LP+GL  +A +FI E             +  H+                 K + F
Sbjct: 820  DSDKILPDGLRSKAEQFIRE----------EIKKYQHQK---------------IKPKDF 854

Query: 1553 LELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL 1732
            L L+K K+L+SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL
Sbjct: 855  LNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL 914

Query: 1733 MTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKVSVADLLESMEVQL---SINRRKVAR 1903
            MTA   I+TP++TCP  + ++K D + L  K+KK++VAD+LESMEV +   +++   +  
Sbjct: 915  MTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICS 974

Query: 1904 TYKLKM------KLKETEFVSSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXX 2065
             YKLKM      K  E   ++ KD ++ L+ VFL+E+E  I+NHL+ LSKISGIK FM  
Sbjct: 975  IYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPD 1034

Query: 2066 XXXXXXXXXXXXXXXGTRK----------XXXXXXXXXXXXXXXXXXXTQKKTDEMNYGN 2215
                           G  +                              Q+ TDEM+Y +
Sbjct: 1035 SQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYED 1094

Query: 2216 ESDVDHCEDELSADTKKGASDEEDHE--------DMDTSKDEEAEHS-----GKEDETRD 2356
            +S+V+  E    A  +      ED            D  KDE ++ S         ++R+
Sbjct: 1095 DSEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSRE 1154

Query: 2357 EQNANEGSTRSKKTDAKI-----RRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQK 2521
            E+  +E   + KK  AK       RA+ +      FEVHFK   EPH+LLAQIA+KTA+K
Sbjct: 1155 EKTGSE--PKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKK 1212

Query: 2522 VFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGIDFKS 2701
            V+++  G++ QCR+     ++      D  K K   +K +         A+  +G+DF +
Sbjct: 1213 VYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEK-------IQALHTTGVDFGA 1265

Query: 2702 FWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADY 2881
            FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ RHL+LIAD+
Sbjct: 1266 FWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADF 1325

Query: 2882 MTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPV 3061
            MTH+G YRPMSR G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSSRICLGLPV
Sbjct: 1326 MTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLPV 1385

Query: 3062 KVGTGCFDLMQKLE 3103
            K+GTG FDLMQK+E
Sbjct: 1386 KMGTGSFDLMQKVE 1399


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  978 bits (2529), Expect = 0.0
 Identities = 543/1072 (50%), Positives = 706/1072 (65%), Gaps = 38/1072 (3%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ PT GD +R LIQDHIV+A L+T K+TFL+  EF+QLLY SGV  AG GS  G    K
Sbjct: 617  YVKPTSGDPIRALIQDHIVSAALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQK 676

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            V + +SE  +    PA+WKPEPLWTGKQVI+ALL +ITRG  P T +   K+P N+F + 
Sbjct: 677  VFISNSESEMFLFPPAIWKPEPLWTGKQVISALLYYITRGSPPFTAEKNAKIPSNFFKTQ 736

Query: 362  SYKNGEEDQDHNAEHD------LLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGI 523
              K     +D + + D      LLI+KN+LVRGV+DKAQFG YG++HTVQELYGSN AG 
Sbjct: 737  IRKGKRYTEDTSKKKDKPDEDKLLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGN 796

Query: 524  LLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG-EDVGEEVHCDFVKFKPGQ 700
            LLSALSRLFT FLQ HGFTCGVDDL++    D++R  +L+  E +G+ VH +F+  K   
Sbjct: 797  LLSALSRLFTTFLQMHGFTCGVDDLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVKNSD 856

Query: 701  -IGPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPK 877
             I P  LQL IEK I S+ E+A  TLD KM + L +R +   S ILK LL++G+LKP  K
Sbjct: 857  NIDPVTLQLNIEKKIRSNGEAAL-TLDRKMTSNLNSRTS---SGILKKLLSEGILKPSGK 912

Query: 878  NCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFI 1057
            NCIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP FPPWD + RAGGFI
Sbjct: 913  NCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFI 972

Query: 1058 TDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSD 1237
             DRFL+ L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKVCYD+TVRD+D
Sbjct: 973  IDRFLTALHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDAD 1032

Query: 1238 GSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQKF-QNLREFNSYISELPEGLEEEA 1414
            GSI+QF+YGEDGVDVH+TSF+  F AL  N+E ++  + + L   + YI++LPE LE +A
Sbjct: 1033 GSIIQFHYGEDGVDVHQTSFITEFGALSTNKELVFSNYCRQLDRSSPYINKLPEALEGKA 1092

Query: 1415 RRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKYLTSLAE 1594
             +F        S + N  S +                     +  FL L++ KY++ LA+
Sbjct: 1093 EKF--------SKQRNLGSME---------------------QADFLRLMEHKYVSCLAQ 1123

Query: 1595 SGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIKTPILTC 1774
             GEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEILM A   IKTP +TC
Sbjct: 1124 PGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKTPFMTC 1183

Query: 1775 PFSEVRSKRDVVALVTKVKKVSVADLLESMEVQ---LSINRRKVARTYKLKMKL-KETEF 1942
            P    +S +D + L  K+KK++VAD+++SM+V    +++   +V   YKL MKL K  ++
Sbjct: 1184 PLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVLGGQVCSIYKLVMKLYKSKQY 1243

Query: 1943 VSSKDI-----KNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXX 2107
                DI     + TL   F++E+E  I+NH+  LSKISGIK F                 
Sbjct: 1244 PEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGIKKFKTDPQSNYSNSSEDAHS 1303

Query: 2108 XGTRKXXXXXXXXXXXXXXXXXXXTQ--------------KKTDEMNYGNESDVDHCEDE 2245
             G+                     T+              + TDE++Y +  + +  + E
Sbjct: 1304 NGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKLQGTDEVDYEDGPEEETHDGE 1363

Query: 2246 LSADTK--KGASDEEDHED----MDTSKDEEAEHSGKEDETRDEQNANEGSTRSKKTDAK 2407
            LS + +  +  SD + +E+     D +  E  E   K     ++QN      +S+ T  K
Sbjct: 1364 LSEEIEGDEDGSDVDANENYNNVTDANNSEGLEKPSKSKTIDEKQNLKREKKKSEPTTKK 1423

Query: 2408 IRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEK 2587
              RA+    +   FE+HF+FT EPH+LL QIAQ+TA+KV ++  G++ +C+ +     E 
Sbjct: 1424 YDRAIFVEAKGKHFEIHFRFTGEPHILLTQIAQRTAKKVCIQNFGKVGECKAITC--KES 1481

Query: 2588 TVIWNDTMKPKRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVL 2767
             VI+      KR E    + ++     A++ SG+ FK+FW++ +DLD+  +YSNNVHA+L
Sbjct: 1482 GVIYYGKDGRKRIE---ISASEKEQIPALQTSGVHFKTFWELEDDLDVRYIYSNNVHAML 1538

Query: 2768 NTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSP 2947
            N YGVEAAR T+IREV+ VF  YG+ ++ RHL+LIAD+MTHTG YRPM+R+GSI++S SP
Sbjct: 1539 NAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHTGSYRPMNRTGSIADSTSP 1598

Query: 2948 FLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
            F+KM FETA  FIVEAA  G  D LETPS+RICLGLPVK+GTGC DL+QKLE
Sbjct: 1599 FIKMCFETAGNFIVEAAYHGQVDNLETPSARICLGLPVKMGTGCHDLIQKLE 1650


>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
            gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
            isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  977 bits (2526), Expect = 0.0
 Identities = 550/1093 (50%), Positives = 709/1093 (64%), Gaps = 59/1093 (5%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ P+ G+ +R LIQDHIV+AVL+T ++TFL+R EF+QLLY SGV +    S  G    K
Sbjct: 343  YVRPSNGEPIRALIQDHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQK 402

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            V V  SE  +  I+PA+ KP+PLWTGKQVI+++L+HITRG  P TV    K+P+++F + 
Sbjct: 403  VFVSTSEEGMLPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDFFRNR 462

Query: 362  SYKNGEEDQDHNA--------------------EHDLLIWKNELVRGVIDKAQFGKYGLV 481
              KN +  ++ N                     E  +LI++N+LVRGVIDKAQF  YGLV
Sbjct: 463  RNKNKQSSREENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLV 522

Query: 482  HTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG-EDVG 658
            HTVQELYGSN+AGILLS  SRLFT+FLQ HGFTCGVDDL+I+ + D++RK++LE  E   
Sbjct: 523  HTVQELYGSNTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKV 582

Query: 659  EEVHCDFVKFKPGQIGPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILK 838
             E H +    K       ELQLEIE+ I  D E+A   LD KM + L N  +++G  +L 
Sbjct: 583  TEAHYELFGVKVNS--ETELQLEIERTIRRDGETALTALDRKMISVL-NENSSKG--VLT 637

Query: 839  HLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSF 1018
             LL++GL+K   +NCIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP F
Sbjct: 638  ELLSEGLVKSMGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCF 697

Query: 1019 PPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLES 1198
             PWD+ ARAGGFI+DRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 
Sbjct: 698  HPWDWAARAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLEC 757

Query: 1199 LKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQKF-QNLREFNS 1375
            LK+ YD+TVRD+DGSIVQF YGEDG+DVH+TSF+  F+AL  N++ + +K    L E + 
Sbjct: 758  LKISYDHTVRDADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGEPDD 817

Query: 1376 YISELPEGLEEEARRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFL 1555
                LP+GL  +A +FI E             +  H+                 K + FL
Sbjct: 818  SDKILPDGLRSKAEQFIRE----------EIKKYQHQK---------------IKPKDFL 852

Query: 1556 ELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM 1735
             L+K K+L+SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM
Sbjct: 853  NLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM 912

Query: 1736 TAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKVSVADLLESMEVQL---SINRRKVART 1906
            TA   I+TP++TCP  + ++K D + L  K+KK++VAD+LESMEV +   +++   +   
Sbjct: 913  TASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSI 972

Query: 1907 YKLKM------KLKETEFVSSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXXX 2068
            YKLKM      K  E   ++ KD ++ L+ VFL+E+E  I+NHL+ LSKISGIK FM   
Sbjct: 973  YKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDS 1032

Query: 2069 XXXXXXXXXXXXXXGTRK----------XXXXXXXXXXXXXXXXXXXTQKKTDEMNYGNE 2218
                          G  +                              Q+ TDEM+Y ++
Sbjct: 1033 QRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYEDD 1092

Query: 2219 SDVDHCEDELSADTKKGASDEEDHE--------DMDTSKDEEAEHS-----GKEDETRDE 2359
            S+V+  E    A  +      ED            D  KDE ++ S         ++R+E
Sbjct: 1093 SEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREE 1152

Query: 2360 QNANEGSTRSKKTDAKI-----RRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKV 2524
            +  +E   + KK  AK       RA+ +      FEVHFK   EPH+LLAQIA+KTA+KV
Sbjct: 1153 KTGSE--PKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKV 1210

Query: 2525 FLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGIDFKSF 2704
            +++  G++ QCR+     ++      D  K K   +K +         A+  +G+DF +F
Sbjct: 1211 YIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEK-------IQALHTTGVDFGAF 1263

Query: 2705 WDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYM 2884
            W M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ RHL+LIAD+M
Sbjct: 1264 WKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFM 1323

Query: 2885 THTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVK 3064
            TH+G YRPMSR G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSSRICLGLPVK
Sbjct: 1324 THSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLPVK 1383

Query: 3065 VGTGCFDLMQKLE 3103
            +GTG FDLMQK+E
Sbjct: 1384 MGTGSFDLMQKVE 1396


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  977 bits (2526), Expect = 0.0
 Identities = 550/1093 (50%), Positives = 709/1093 (64%), Gaps = 59/1093 (5%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ P+ G+ +R LIQDHIV+AVL+T ++TFL+R EF+QLLY SGV +    S  G    K
Sbjct: 635  YVRPSNGEPIRALIQDHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQK 694

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            V V  SE  +  I+PA+ KP+PLWTGKQVI+++L+HITRG  P TV    K+P+++F + 
Sbjct: 695  VFVSTSEEGMLPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDFFRNR 754

Query: 362  SYKNGEEDQDHNA--------------------EHDLLIWKNELVRGVIDKAQFGKYGLV 481
              KN +  ++ N                     E  +LI++N+LVRGVIDKAQF  YGLV
Sbjct: 755  RNKNKQSSREENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLV 814

Query: 482  HTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG-EDVG 658
            HTVQELYGSN+AGILLS  SRLFT+FLQ HGFTCGVDDL+I+ + D++RK++LE  E   
Sbjct: 815  HTVQELYGSNTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKV 874

Query: 659  EEVHCDFVKFKPGQIGPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILK 838
             E H +    K       ELQLEIE+ I  D E+A   LD KM + L N  +++G  +L 
Sbjct: 875  TEAHYELFGVKVNS--ETELQLEIERTIRRDGETALTALDRKMISVL-NENSSKG--VLT 929

Query: 839  HLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSF 1018
             LL++GL+K   +NCIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP F
Sbjct: 930  ELLSEGLVKSMGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCF 989

Query: 1019 PPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLES 1198
             PWD+ ARAGGFI+DRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 
Sbjct: 990  HPWDWAARAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLEC 1049

Query: 1199 LKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQKF-QNLREFNS 1375
            LK+ YD+TVRD+DGSIVQF YGEDG+DVH+TSF+  F+AL  N++ + +K    L E + 
Sbjct: 1050 LKISYDHTVRDADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGEPDD 1109

Query: 1376 YISELPEGLEEEARRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFL 1555
                LP+GL  +A +FI E             +  H+                 K + FL
Sbjct: 1110 SDKILPDGLRSKAEQFIRE----------EIKKYQHQK---------------IKPKDFL 1144

Query: 1556 ELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM 1735
             L+K K+L+SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM
Sbjct: 1145 NLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM 1204

Query: 1736 TAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKVSVADLLESMEVQL---SINRRKVART 1906
            TA   I+TP++TCP  + ++K D + L  K+KK++VAD+LESMEV +   +++   +   
Sbjct: 1205 TASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSI 1264

Query: 1907 YKLKM------KLKETEFVSSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXXX 2068
            YKLKM      K  E   ++ KD ++ L+ VFL+E+E  I+NHL+ LSKISGIK FM   
Sbjct: 1265 YKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDS 1324

Query: 2069 XXXXXXXXXXXXXXGTRK----------XXXXXXXXXXXXXXXXXXXTQKKTDEMNYGNE 2218
                          G  +                              Q+ TDEM+Y ++
Sbjct: 1325 QRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYEDD 1384

Query: 2219 SDVDHCEDELSADTKKGASDEEDHE--------DMDTSKDEEAEHS-----GKEDETRDE 2359
            S+V+  E    A  +      ED            D  KDE ++ S         ++R+E
Sbjct: 1385 SEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREE 1444

Query: 2360 QNANEGSTRSKKTDAKI-----RRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKV 2524
            +  +E   + KK  AK       RA+ +      FEVHFK   EPH+LLAQIA+KTA+KV
Sbjct: 1445 KTGSE--PKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKV 1502

Query: 2525 FLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGIDFKSF 2704
            +++  G++ QCR+     ++      D  K K   +K +         A+  +G+DF +F
Sbjct: 1503 YIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEK-------IQALHTTGVDFGAF 1555

Query: 2705 WDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYM 2884
            W M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ RHL+LIAD+M
Sbjct: 1556 WKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFM 1615

Query: 2885 THTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVK 3064
            TH+G YRPMSR G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSSRICLGLPVK
Sbjct: 1616 THSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLPVK 1675

Query: 3065 VGTGCFDLMQKLE 3103
            +GTG FDLMQK+E
Sbjct: 1676 MGTGSFDLMQKVE 1688


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
            gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
            putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  976 bits (2524), Expect = 0.0
 Identities = 547/1087 (50%), Positives = 711/1087 (65%), Gaps = 53/1087 (4%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ P+ G+ +R LIQDHIV+AVL+T ++TFL+R EF+QLLY SGV +    S  G    K
Sbjct: 635  YVRPSNGEPIRALIQDHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQK 694

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            V V  SE  +  I+PA+ KP+PLWTGKQVI+++L+HITRG  P TV    K+P+++F + 
Sbjct: 695  VFVSTSEEGMLPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDFFRNR 754

Query: 362  SYKNGEEDQDHNA--------------------EHDLLIWKNELVRGVIDKAQFGKYGLV 481
              KN +  ++ N                     E  +LI++N+LVRGVIDKAQF  YGLV
Sbjct: 755  RNKNKQSSREENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLV 814

Query: 482  HTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG-EDVG 658
            HTVQELYGSN+AGILLS  SRLFT+FLQ HGFTCGVDDL+I+ + D++RK++LE  E   
Sbjct: 815  HTVQELYGSNTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKV 874

Query: 659  EEVHCDFVKFKPG-QIGPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQIL 835
             E H +    K   +  P ELQLEIE+ I  D E+A   LD KM + L N  +++G  +L
Sbjct: 875  TEAHYELFGVKVNSETAPTELQLEIERTIRRDGETALTALDRKMISVL-NENSSKG--VL 931

Query: 836  KHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPS 1015
              LL++GL+K   +NCIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP 
Sbjct: 932  TELLSEGLVKSMGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPC 991

Query: 1016 FPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 1195
            F PWD+ ARAGGFI+DRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE
Sbjct: 992  FHPWDWAARAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 1051

Query: 1196 SLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQKF-QNLREFN 1372
             LK+ YD+TVRD+DGSIVQF YGEDG+DVH+TSF+  F+AL  N++ + +K    L E +
Sbjct: 1052 CLKISYDHTVRDADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGEPD 1111

Query: 1373 SYISELPEGLEEEARRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGF 1552
                 LP+GL  +A +FI E             +  H+                 K + F
Sbjct: 1112 DSDKILPDGLRSKAEQFIRE----------EIKKYQHQK---------------IKPKDF 1146

Query: 1553 LELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL 1732
            L L+K K+L+SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL
Sbjct: 1147 LNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL 1206

Query: 1733 MTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKVSVADLLESMEVQL---SINRRKVAR 1903
            MTA   I+TP++TCP  + ++K D + L  K+KK++VAD+LESMEV +   +++   +  
Sbjct: 1207 MTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICS 1266

Query: 1904 TYKLKM------KLKETEFVSSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXX 2065
             YKLKM      K  E   ++ KD ++ L+ VFL+E+E  I+NHL+ LSKISGIK FM  
Sbjct: 1267 IYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPD 1326

Query: 2066 XXXXXXXXXXXXXXXGTRKXXXXXXXXXXXXXXXXXXXTQKKTDEMNYGNESDVDHCEDE 2245
                           G  +                    + K D+ +  +++D +   ++
Sbjct: 1327 SQRNASNEMDEDVSEGRSR--------------------ETKNDDDDDDDDADDEERAED 1366

Query: 2246 LSADTKKGASDEEDHED-----------MDTSKDEEAEHS-----GKEDETRDEQNANEG 2377
            L A      S+ +  ED            D  KDE ++ S         ++R+E+  +E 
Sbjct: 1367 LGASLAALESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREEKTGSE- 1425

Query: 2378 STRSKKTDAKI-----RRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSG 2542
              + KK  AK       RA+ +      FEVHFK   EPH+LLAQIA+KTA+KV+++  G
Sbjct: 1426 -PKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFG 1484

Query: 2543 EMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGIDFKSFWDMHED 2722
            ++ QCR+     ++      D  K K   +K +         A+  +G+DF +FW M + 
Sbjct: 1485 KIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEK-------IQALHTTGVDFGAFWKMEDH 1537

Query: 2723 LDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGY 2902
            +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ RHL+LIAD+MTH+G Y
Sbjct: 1538 IDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRY 1597

Query: 2903 RPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCF 3082
            RPMSR G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSSRICLGLPVK+GTG F
Sbjct: 1598 RPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSF 1657

Query: 3083 DLMQKLE 3103
            DLMQK+E
Sbjct: 1658 DLMQKVE 1664


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score =  971 bits (2511), Expect = 0.0
 Identities = 536/1074 (49%), Positives = 709/1074 (66%), Gaps = 40/1074 (3%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ PT GD +R LIQDHIV+A L+T K+TFL+  EF+QLLY SGV   G G  PG    K
Sbjct: 608  YVKPTSGDPIRALIQDHIVSAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQK 667

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            + + +S+  +    PA++KPEPLWTGKQVI+ALL +IT+G  P TV+   K+P ++F + 
Sbjct: 668  IFMSNSDSEMFLFPPAIFKPEPLWTGKQVISALLYYITKGSPPFTVEKNAKIPSSFFKTR 727

Query: 362  SYKNGEEDQDHNAEHD------LLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGI 523
              +  +  +D + + D      LLI++N+LVRGV+DKAQFG YG+VHTVQE YGSN+AGI
Sbjct: 728  MREGKKRTKDTSIKKDEPDEDKLLIYRNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGI 787

Query: 524  LLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG-EDVGEEVHCDFVKFKPGQ 700
            LLSALSRLFT FLQ HGFTCGVDDL++    D +R  +LE  E++G+ VH +F+    G 
Sbjct: 788  LLSALSRLFTNFLQMHGFTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGD 847

Query: 701  -IGPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPK 877
             I P  +QL +EK I S+ E+A   LD KM + L +R +T    +LK LL++G+LKP  K
Sbjct: 848  NIDPITMQLNVEKKIRSNGEAAITYLDRKMISNLNSRTSTG---VLKVLLSEGILKPSGK 904

Query: 878  NCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFI 1057
            N IS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP F  WD + RAGGFI
Sbjct: 905  NWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFI 964

Query: 1058 TDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSD 1237
             DRFL+ LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKVCYD+TVRD+D
Sbjct: 965  IDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDAD 1024

Query: 1238 GSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQK-FQNLREFNSYISELPEGLEEEA 1414
            GSI+QF+YGEDGVDVH+TSF+  F+AL  N+E ++    + L + + YI++LP+ L+ +A
Sbjct: 1025 GSIIQFHYGEDGVDVHQTSFINKFEALSTNKELVYSNCCRELDKSSPYINKLPDALKGKA 1084

Query: 1415 RRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKYLTSLAE 1594
             +FI +    +S K   S    H N                    FL L++ KY++SLA+
Sbjct: 1085 EKFILD----SSSKQRNSGSMTHTN--------------------FLHLMEHKYVSSLAQ 1120

Query: 1595 SGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIKTPILTC 1774
             GEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEIL  A   IKTP +TC
Sbjct: 1121 PGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILTAASAHIKTPFMTC 1180

Query: 1775 PFSEVRSKRDVVALVTKVKKVSVADLLESMEVQ---LSINRRKVARTYKLKMKLKETEF- 1942
            P    +S  D + L  K+KK++VAD++ESM+V    +++   ++   YKL MKL + +  
Sbjct: 1181 PLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQDGRICSIYKLMMKLHKPKHY 1240

Query: 1943 -----VSSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXX 2107
                 V+ KD + TL   F++ +E  IEN++  L+KISGI NF                 
Sbjct: 1241 PKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKISGITNFKTDAQPNSSNGAEDDPS 1300

Query: 2108 XG-TRKXXXXXXXXXXXXXXXXXXXTQKKT-----DEMNYGNESDVDHCEDELSADTKKG 2269
             G T                       +K+     D+++Y +  + +  ED   ++  +G
Sbjct: 1301 NGKTNDDDDDDGDADDTEGAEDLGLDAQKSKRQVVDDVDYDDGPEEETLEDGELSEDLEG 1360

Query: 2270 ASDEEDHEDMDTSKDEEAEHSGKEDETRDEQNANEG----------------STRSKKTD 2401
              D +D+E +    D + +  GK DE   +   NE                 +++S+   
Sbjct: 1361 VEDAKDNEYVKDDGDGKDDEDGKGDEDGSDIEVNENDKKVTLGANYSQGPEENSKSQPVS 1420

Query: 2402 AKIRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPD 2581
             K  R V   FE+  FE+HFKFT EPH+LLAQIAQKTA+KV ++  G++ QC+ +     
Sbjct: 1421 KKFDRRVYVKFEKRHFEIHFKFTGEPHILLAQIAQKTAEKVCIQNFGKVGQCKAITC--K 1478

Query: 2582 EKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHA 2761
            E  VI+      KR E  P +  +     A++ SGI FKSFW+M +DL++  +YSNNVHA
Sbjct: 1479 ESGVIYYGEDDSKR-EEIPSSVKEKIP--ALQTSGIHFKSFWEMQDDLNVRYVYSNNVHA 1535

Query: 2762 VLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESL 2941
            +L+TYGVEAA+ T+IREV+ VF  YG+ ++ RHL LIAD+MTH+G YRPMSR GSI++S 
Sbjct: 1536 ILSTYGVEAAKETIIREVQNVFKSYGISVNIRHLMLIADFMTHSGCYRPMSRKGSIADST 1595

Query: 2942 SPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
            SPFLK+ FETAS FIVEAA  G  D L++PS+RICLGLPVK+GTGC +L+QKLE
Sbjct: 1596 SPFLKICFETASNFIVEAACHGQVDNLDSPSARICLGLPVKMGTGCHELIQKLE 1649


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score =  969 bits (2506), Expect = 0.0
 Identities = 535/1080 (49%), Positives = 707/1080 (65%), Gaps = 46/1080 (4%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ PT GD +R LIQDHIV+A L+T K+TFL+  EF+QLLY SGV   G G  PG    K
Sbjct: 612  YVKPTSGDPIRALIQDHIVSAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQK 671

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            + + +S+  +    PA++KPEPLWTGKQVI+ALL +IT+G  P TV+   K+P ++F + 
Sbjct: 672  IFMSNSDSEMFLFPPAIFKPEPLWTGKQVISALLYYITKGSPPFTVEKNAKIPSSFFKTR 731

Query: 362  SYKNGEEDQDHNAEHD------LLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGI 523
              +  +  +D + + D      LLI+KN+LVRGV+DKAQFG YG+VHTVQE YGSN+AG 
Sbjct: 732  MREGKKRTKDTSIKKDEPDEDKLLIYKNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGF 791

Query: 524  LLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG-EDVGEEVHCDFVKFKPGQ 700
            LLSALSRLFT FLQ HGFTCGVDDL++    D +R  +LE  E++G+ VH +F+    G 
Sbjct: 792  LLSALSRLFTNFLQMHGFTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGD 851

Query: 701  -IGPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPK 877
             I P  +QL +EK I S+ E+A   LD KM + L +R +   S +LK LL++G+LKP  K
Sbjct: 852  NIDPITMQLNVEKKIRSNGEAAITYLDRKMISNLNSRTS---SGVLKELLSEGILKPSGK 908

Query: 878  NCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFI 1057
            N IS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP F  WD + RAGGFI
Sbjct: 909  NWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFI 968

Query: 1058 TDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSD 1237
             DRFL+ LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKVCYD+TVRD+D
Sbjct: 969  IDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDAD 1028

Query: 1238 GSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQK-FQNLREFNSYISELPEGLEEEA 1414
            GSI+QF+YGEDGVDVH+TSF+  F+AL  N+E ++    + L E + YI++LP+ L+ +A
Sbjct: 1029 GSIIQFHYGEDGVDVHQTSFINKFEALSTNKELVYSNCCRELDESSPYINKLPDALKGKA 1088

Query: 1415 RRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKYLTSLAE 1594
             +FI +    +S K   S    H N                    FL+L++ KY++SLA+
Sbjct: 1089 EKFIRD----SSSKQRNSGSMTHTN--------------------FLQLMEHKYVSSLAQ 1124

Query: 1595 SGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIKTPILTC 1774
             GEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEIL  A   IKTP +TC
Sbjct: 1125 PGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILTAASAHIKTPFMTC 1184

Query: 1775 PFSEVRSKRDVVALVTKVKKVSVADLLESMEVQ---LSINRRKVARTYKLKMKLKETEF- 1942
            P    +S  D + L  K+KK++VAD++ESM+V    +++   ++   YKL MKL + +  
Sbjct: 1185 PLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQDGRICSIYKLMMKLHKPKHY 1244

Query: 1943 -----VSSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXX 2107
                 V+ KD + TL   F++ +E  IEN++  L+KISGI NF                 
Sbjct: 1245 PKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKISGITNFKTDAQPNSSNGAEDDPS 1304

Query: 2108 XGTRK--------XXXXXXXXXXXXXXXXXXXTQKKTDEMNYGNESDVDHCEDELSADTK 2263
             G                               ++  D+++Y +  + +  ED   ++  
Sbjct: 1305 NGKTNDDDDDDDDGDADDTEGAEDLGLDAQKSKRQVVDDVDYDDGPEEETLEDGELSEDL 1364

Query: 2264 KGASDEEDHEDMDTSKDEEAEHSGKEDETRDEQNANEG----------------STRSKK 2395
            +G  D +D+E +    D + +  GK DE   +   NE                 +++S+ 
Sbjct: 1365 EGVEDAKDNEHVKDDGDGKDDEDGKGDEDGSDIEVNENDKKVTLGVNYSQGPEENSKSQP 1424

Query: 2396 TDAKIRRAVKHVFERSSFEVHFKFTTEPHVLLAQ----IAQKTAQKVFLKRSGEMSQCRL 2563
               K  R V   FE+  FE+HFKFT EPH+LLAQ    IAQKTA+KV ++  G++ QC+ 
Sbjct: 1425 VSKKFDRRVYVKFEKRHFEIHFKFTDEPHILLAQLLSTIAQKTAEKVCIQNFGKVGQCKA 1484

Query: 2564 VQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLY 2743
            +     E  VI+      KR E  P +  +     A++ SGI FKSFW+M +DL++  +Y
Sbjct: 1485 ITC--KESGVIYYGEDDSKR-EEIPSSVKEKIP--ALQTSGIHFKSFWEMQDDLNVRYVY 1539

Query: 2744 SNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSG 2923
            SNNVHA+L+TYGVEAA+ T+IREV+ VF  YG+ ++ RHL LIAD+MTH+G YRPMSR G
Sbjct: 1540 SNNVHAILSTYGVEAAKETIIREVQNVFKSYGISVNIRHLMLIADFMTHSGCYRPMSRKG 1599

Query: 2924 SISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
            SI++S SPFLK+ FETAS FIVEAA  G  D L++PS+RICLGLPVK+GTGC +L+QKLE
Sbjct: 1600 SIADSTSPFLKICFETASNFIVEAACHGQVDNLDSPSARICLGLPVKMGTGCHELIQKLE 1659


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score =  958 bits (2476), Expect = 0.0
 Identities = 537/1116 (48%), Positives = 709/1116 (63%), Gaps = 82/1116 (7%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ P+ GD +R LIQDHIV+A L+T K+TFL R EF QLLY SGV ++G GS  G    +
Sbjct: 636  YVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQR 695

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            V +  SE  V  +LPA+WKPEPLWTGKQVITA+LNHITRG  P  V+  GK+P+++F + 
Sbjct: 696  VLISRSEQEVLPLLPAIWKPEPLWTGKQVITAVLNHITRGRPPFVVERGGKLPQDFFKTR 755

Query: 362  SYKNGEEDQDHN-------------------------------------------AEHDL 412
               + + D+  N                                           +E  L
Sbjct: 756  FNADKQSDRKKNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKL 815

Query: 413  LIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVD 592
            LI+KN+LVRGVIDKAQF  YGLVHTVQELYGSN+AG LLSALSRLFT+FLQ HGFTCGVD
Sbjct: 816  LIYKNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVD 875

Query: 593  DLIILPNFDLQRKEKLEG-EDVGEEVHCDFVKFKPG-QIGPEELQLEIEKAISSDRESAT 766
            DL+IL + + +RK  L G E++G+ VH + ++ + G +I P +L+ EIEKA+    ++A 
Sbjct: 876  DLLILKDKERERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEIEKAMRGGGDAAV 935

Query: 767  ATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISA 946
            A  DMKM ++L    +   S ++  LL++GLLKP  KN IS+MTT+GAKGS VNFQQIS+
Sbjct: 936  AYFDMKMTSQLNKHTS---SSVINELLSEGLLKPTGKNWISLMTTSGAKGSKVNFQQISS 992

Query: 947  YLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREG 1126
            +LGQQELEGKRVPRMVSGKTLPSF PWD+  RAGGFI DRFL+GLRPQEYYFHCMAGREG
Sbjct: 993  HLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFHCMAGREG 1052

Query: 1127 LVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKN 1306
            LVDTAVKTSRSGYLQRCLIKNLE LK+ YDY+VRD+DGSIVQF YGEDGVDVH+TSF+  
Sbjct: 1053 LVDTAVKTSRSGYLQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISK 1112

Query: 1307 FKALEDNRETIWQKFQ-NLREFNSYISELPEGLEEEARRFIHETHGNTSGKHNASSEQLH 1483
            F AL  N+E I++K    L   N+YI ELP+ L++ A +F  +   N   K +       
Sbjct: 1113 FDALAANQEMIYKKCSGQLDASNAYIMELPDALKDNAEKFADKFLSNEMAKQD------- 1165

Query: 1484 RNXXXXXXXXXXXXXAFTKERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLN 1663
                                  FL+LVK K++ SLA+ GEPVG++A+QSVGEPSTQMTLN
Sbjct: 1166 ----------------------FLKLVKHKFVLSLAQPGEPVGLLASQSVGEPSTQMTLN 1203

Query: 1664 TFHLAGRGEMNVTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKVSV 1843
            TFHLAGRGEMNVTLGIPRLQEIL  A   IKTP++TCP    +++ D   L  K+KK++V
Sbjct: 1204 TFHLAGRGEMNVTLGIPRLQEILTIASKDIKTPVITCPLLVGKTEDDAKRLADKLKKITV 1263

Query: 1844 ADLLESMEVQL---SINRRKVARTYKLKMKLKETE------FVSSKDIKNTLEGVFLKEM 1996
            AD+++ + V++   + +  +    Y L M+L + +       ++ +D +  LE VF++E+
Sbjct: 1264 ADIVKKISVKVRAFTSHDGQACSVYVLTMELYKPKNYPTYTDITLEDWEEILEVVFVREL 1323

Query: 1997 EAQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGTRK-------XXXXXXXXXXX 2155
            E  I+NHL+ LSKI+GIKN                      +                  
Sbjct: 1324 EDTIQNHLLLLSKINGIKNVASGLTQKASNETDQDGSGNVSQCRGDDDDADDADGEEAED 1383

Query: 2156 XXXXXXXXTQKKTDEMNY---------------GNESDVDHCEDELSAD-TKKGASDEED 2287
                     Q+ TDE +Y               G  S++D  E E+  D  +    D+  
Sbjct: 1384 LGMDAHKQKQRATDEKDYEDGSEEEMNDGVSAAGFGSEIDQAESEIDDDQAETEIEDDRA 1443

Query: 2288 HEDMDTSKDEEAEH----SGKEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERSSFEV 2455
              +++TS+D+ +E+    + K  + + +  +     R+K       RA+        FE 
Sbjct: 1444 TNEIETSQDQASENLKPFTPKSSKKKSKSKSKRKKARAKLVKKDTDRAIYVAARGMHFEA 1503

Query: 2456 HFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENK 2635
            HFKF  EP++LLAQIA+  A+KV+++ SG++ QC++   +  E  VI+       R + K
Sbjct: 1504 HFKFINEPNILLAQIARHVAKKVYIQSSGKIDQCQVT--NCKESQVIYYGKDPKTREDIK 1561

Query: 2636 PQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREV 2815
            P+   +     A+  +G+DF +FW + + +D+  +YSNN+ A+L TYGVEAAR T+IRE+
Sbjct: 1562 PE---EKEKVQALHTTGVDFHAFWRLQDFIDVRYIYSNNIQAMLETYGVEAARETIIREI 1618

Query: 2816 KQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEA 2995
            K VF  YG+ ++ RHLSLIAD+MTH+GGYRPMSR G I+ES+SPF KM+FETASKFIVEA
Sbjct: 1619 KHVFGSYGISVNTRHLSLIADFMTHSGGYRPMSRLGGIAESVSPFSKMTFETASKFIVEA 1678

Query: 2996 ASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
            AS G  D+L+TPS+RICLGLPVK+GTG FDLMQKLE
Sbjct: 1679 ASYGQVDKLDTPSARICLGLPVKMGTGSFDLMQKLE 1714


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score =  957 bits (2474), Expect = 0.0
 Identities = 542/1117 (48%), Positives = 711/1117 (63%), Gaps = 83/1117 (7%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ P+ GD +R LIQDHIV+A L+T K+TFL R EF QLLY SGV ++G GS  G    +
Sbjct: 636  YVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQR 695

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFAS- 358
            V +  SE  V  +LPA+WKPEPLWTGKQVITA+LNHITRG  P  V+  GK+P+++F + 
Sbjct: 696  VLISRSEQEVLPLLPAIWKPEPLWTGKQVITAVLNHITRGRPPFIVERGGKLPQDFFKTR 755

Query: 359  ----------------------------------ASYKNGEEDQDHN--------AEHDL 412
                                                 K GEE +           +E  L
Sbjct: 756  FNADKQSGRKKNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKL 815

Query: 413  LIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVD 592
            LI+KN+LVRGVIDKAQF  YGLVHTVQELYGSN+AG LLSALSRLFT+FLQ HGFTCGVD
Sbjct: 816  LIYKNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVD 875

Query: 593  DLIILPNFDLQRKEKLEG-EDVGEEVHCDFVKFKPG-QIGPEELQLEIEKAISSDRESAT 766
            DL+IL + + +RK  L G E++G+ VH + ++ + G +I P +L+ EIEKA+    ++A 
Sbjct: 876  DLLILKDKERERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEIEKAMRGGGDAAV 935

Query: 767  ATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISA 946
            A  DMKM ++L    +   S ++  LL++GLLKP  KN IS+MTT+GAKGS VNFQQIS+
Sbjct: 936  AYFDMKMTSQLNKHTS---SSVINDLLSEGLLKPTGKNWISLMTTSGAKGSKVNFQQISS 992

Query: 947  YLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREG 1126
            +LGQQELEGKRVPRMVSGKTLPSF PWD+  RAGGFI DRFL+GLRPQEYYFHCMAGREG
Sbjct: 993  HLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFHCMAGREG 1052

Query: 1127 LVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKN 1306
            LVDTAVKTSRSGYLQRCLIKNLE LK+ YDY+VRD+DGSIVQF YGEDGVDVH+TSF+  
Sbjct: 1053 LVDTAVKTSRSGYLQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISK 1112

Query: 1307 FKALEDNRETIWQKFQ-NLREFNSYISELPEGLEEEARRFIHETHGNTSGKHNASSEQLH 1483
            F AL  N+E I++K    L   N+YI ELP+ L++ A +F  +   N   K +       
Sbjct: 1113 FDALAANQEMIYKKCSGQLDASNAYIMELPDALKDNAEKFADKFLSNEMAKQD------- 1165

Query: 1484 RNXXXXXXXXXXXXXAFTKERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLN 1663
                                  FL+LVK K++ SLA+ GEPVG++AAQSVGEPSTQMTLN
Sbjct: 1166 ----------------------FLKLVKHKFVLSLAQPGEPVGLLAAQSVGEPSTQMTLN 1203

Query: 1664 TFHLAGRGEMNVTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKVSV 1843
            TFHLAGRGEMNVTLGIPRLQEIL  A   IKTP++TCP    +++ D   L  K+KK++V
Sbjct: 1204 TFHLAGRGEMNVTLGIPRLQEILTIASKDIKTPVITCPLLVGKTEDDAKRLADKLKKITV 1263

Query: 1844 ADLLESMEVQL---SINRRKVARTYKLKMKLKETE------FVSSKDIKNTLEGVFLKEM 1996
            AD+++ + V++   + +  +    Y L M+L + +       ++ +D +  LE VF++E+
Sbjct: 1264 ADIVKKISVKVRAFTSHDGQACTVYVLTMELYKPKNYPTYTDITLEDWEEILEVVFVREL 1323

Query: 1997 EAQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGTRK-------XXXXXXXXXXX 2155
            E  I+NHL+ LSKI+GIKN                      +                  
Sbjct: 1324 EDTIQNHLLLLSKINGIKNVASGLTQKASNETDQEGSGNVSQCRGDDDDADDADGEEAED 1383

Query: 2156 XXXXXXXXTQKKTDEMNY---------------GNESDVDHCEDELSAD-TKKGASDEED 2287
                     Q+ TDE +Y               G  S++D  E E+  D  +    D+  
Sbjct: 1384 LGMDAHKQKQRATDEKDYEDGSEGEMNDGVSAAGFGSEIDQAESEIDDDQAETEIEDDRA 1443

Query: 2288 HEDMDTSKDEEAEHSGKEDETRDEQNANEGSTRSKKTDAKI-----RRAVKHVFERSSFE 2452
              +++ S+D+ +E+  K    +  +  ++  T+ KK  AK+      RA+        FE
Sbjct: 1444 TNEIENSQDQASENL-KPFTPKSSKKKSKSKTKRKKARAKLVKKDTDRAIYVAARGMHFE 1502

Query: 2453 VHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGEN 2632
             HFKF  EP++LLAQIA+  A+KV+++ SG++ QC++   +  E  VI+      KR + 
Sbjct: 1503 AHFKFINEPNILLAQIARHVAKKVYIQSSGKIDQCQVT--NCKESQVIYYGKDPKKREDI 1560

Query: 2633 KPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIRE 2812
            KP+   +     A+  +G+DF +FW + + +D+  +YSNN+ A+L TYGVEAAR T+IRE
Sbjct: 1561 KPE---EKEKVQALHTTGVDFHAFWQLQDFIDVRYIYSNNIQAMLETYGVEAARETIIRE 1617

Query: 2813 VKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVE 2992
            +K VF  YG+ ++ RHLSLIAD+MTH+GGYRPMSR G I+ES+SPF KM+FE ASKFIVE
Sbjct: 1618 IKHVFGSYGISVNTRHLSLIADFMTHSGGYRPMSRLGGIAESVSPFSKMTFEIASKFIVE 1677

Query: 2993 AASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
            AAS G  D+L+TPS+RICLGLPVK+GTG FDLMQKLE
Sbjct: 1678 AASYGQVDKLDTPSARICLGLPVKMGTGSFDLMQKLE 1714


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
            gi|561018822|gb|ESW17626.1| hypothetical protein
            PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  954 bits (2465), Expect = 0.0
 Identities = 532/1065 (49%), Positives = 697/1065 (65%), Gaps = 31/1065 (2%)
 Frame = +2

Query: 2    YIVPTKGDTVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLK 181
            Y+ PT GD +R LIQDHIV+A L+T K+TF+T   F QLLY SGV   G GS  G    K
Sbjct: 605  YVKPTSGDPIRALIQDHIVSAALLTKKDTFITYEVFIQLLYSSGVSMTGLGSFSGKHGQK 664

Query: 182  VSVVDSEGLVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASA 361
            V + +SE  +    PA+WKPEPLWTGKQVI+ALL +ITR   P TV+   K+P N+F + 
Sbjct: 665  VFMTNSEFEMFLFPPAIWKPEPLWTGKQVISALLYYITRDSPPFTVEKNAKIPSNFFKTQ 724

Query: 362  --SYKNGEEDQDHNA-----EHDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAG 520
                K    D+  N      E  LLI+KN+LVRGV+DKAQFG YG++HTVQELYGS  AG
Sbjct: 725  VRDGKRHTRDKSRNKVEPDDEDKLLIYKNDLVRGVVDKAQFGDYGIIHTVQELYGSKVAG 784

Query: 521  ILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG-EDVGEEVHCDFVKFKPG 697
             LLSALSRLFT FLQ HGFTCGVDDL+I    D++R ++L   E++G+ VH +F+     
Sbjct: 785  NLLSALSRLFTTFLQMHGFTCGVDDLMITEEKDVERMDQLRSCEEIGDIVHREFIGVMNS 844

Query: 698  QI-GPEELQLEIEKAISSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFP 874
             I  P  LQL IEK I S+ E+A   LD KM + L +R +   S ILK LL+ G+LKP  
Sbjct: 845  DIIDPITLQLNIEKKIRSNGEAALTYLDRKMTSNLNSRTS---SGILKDLLSDGILKPSG 901

Query: 875  KNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGF 1054
            KNCIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP F PWD + RAGGF
Sbjct: 902  KNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRAGGF 961

Query: 1055 ITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDS 1234
            I DRFL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKVCYD+TVRD+
Sbjct: 962  IIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDA 1021

Query: 1235 DGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQK-FQNLREFNSYISELPEGLEEE 1411
            DGSI+QF+YGEDGVDVH TSF+  F+AL  N+E ++    + L   + YI++LP+ L+E+
Sbjct: 1022 DGSIIQFHYGEDGVDVHHTSFINKFEALSTNKELVYGNCCRQLDRSSPYINKLPDALKEK 1081

Query: 1412 ARRFIHETHGNTSGKHNASSEQLHRNXXXXXXXXXXXXXAFTKERGFLELVKQKYLTSLA 1591
            A  F  +    +  + N  S                      K   FL+L++ KY++ LA
Sbjct: 1082 AENFFRD----SLKQRNLGS---------------------LKRAEFLKLMEHKYVSCLA 1116

Query: 1592 ESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAPTKIKTPILT 1771
            + GE VGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEI+M A   IKTP +T
Sbjct: 1117 QPGESVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEIVMAAARDIKTPFMT 1176

Query: 1772 CPFSEVRSKRDVVALVTKVKKVSVADLLESMEVQ---LSINRRKVARTYKLKMKL-KETE 1939
            CP    +S  + + L  K+KK++VAD+++SM+V    +S+   +V   YKL MKL K  +
Sbjct: 1177 CPLRSNKSMEEAICLADKLKKITVADIIKSMKVSVVPVSVLGGQVCSIYKLVMKLYKPKQ 1236

Query: 1940 F-----VSSKDIKNTLEGVFLKEMEAQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXX 2104
            +     ++ +D ++TL   F++E+E  IENH+  LSKISGIK F                
Sbjct: 1237 YPKYSDITLEDWEDTLRISFVRELEDAIENHMALLSKISGIKKFKTDPQSHSNSSEDAHG 1296

Query: 2105 XXGTRK--------XXXXXXXXXXXXXXXXXXXTQKK----TDEMNYGNESDVDHCEDEL 2248
                 +                            QK+    TDE++Y +  + +  +  L
Sbjct: 1297 NGSESETKGKSNDDDDDDDVVEDTEGYEDLGSDAQKRKRQGTDEVDYEDGPEEETHDGVL 1356

Query: 2249 SADTKKGASDEEDHEDMDTSKDEEAEHSGKEDETRDEQNANEGSTRSKKTDAKIRRAVKH 2428
            S + +    + +D+  +D S  E  +   +     ++ +      +S+ T  K  RAV  
Sbjct: 1357 SEEIENDEDNVDDNMTLDASDSEGLDELSESKSIFEKDSLKREKKKSRPTTRKYDRAVFV 1416

Query: 2429 VFERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDT 2608
              +   F++HFKFT EP +LLA+IA ++A+KV ++ SG + +C+ V     E  V++   
Sbjct: 1417 KAKGMHFQIHFKFTGEPDILLAEIALRSAKKVCIQNSGRVGECKAVTC--KESGVMYYGE 1474

Query: 2609 MKPKRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEA 2788
               KR ++ P +  +     A++ SG+ FK+FW++ +DLD+  +YSNNVHA+LN YGVEA
Sbjct: 1475 DSRKR-DDIPASVKEKIP--ALQTSGVHFKTFWELQDDLDVRYIYSNNVHAMLNAYGVEA 1531

Query: 2789 ARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFE 2968
            AR T+IREV+ VF  YG+ ++ RHL+LIAD+MTH+GGYRPM+R+GSI++  SPF+KM FE
Sbjct: 1532 ARETIIREVQNVFKSYGISVNIRHLTLIADFMTHSGGYRPMNRNGSIADCTSPFIKMCFE 1591

Query: 2969 TASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 3103
            TASKFIVEAA  G  D LETPSSRICLGLPVK+GTGC DL+QKLE
Sbjct: 1592 TASKFIVEAAYHGQVDNLETPSSRICLGLPVKMGTGCHDLIQKLE 1636