BLASTX nr result
ID: Mentha29_contig00008475
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00008475
(256 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU37971.1| hypothetical protein MIMGU_mgv1a003198mg [Mimulus... 105 6e-21
ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Popu... 97 2e-18
ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Popu... 95 1e-17
ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Frag... 92 6e-17
ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arab... 92 7e-17
ref|XP_007041785.1| Splicing factor isoform 4 [Theobroma cacao] ... 91 2e-16
ref|XP_007041782.1| Splicing factor isoform 1 [Theobroma cacao] ... 91 2e-16
ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Caps... 91 2e-16
gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana] 91 2e-16
ref|XP_006409370.1| hypothetical protein EUTSA_v10022624mg [Eutr... 91 2e-16
ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidops... 91 2e-16
ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidops... 91 2e-16
gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana] 91 2e-16
ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis ... 91 2e-16
gb|EXC16553.1| RNA-binding protein 39 [Morus notabilis] 90 4e-16
ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi... 89 5e-16
emb|CBI37850.3| unnamed protein product [Vitis vinifera] 89 5e-16
ref|XP_004497188.1| PREDICTED: RNA-binding protein 39-like [Cice... 89 8e-16
ref|XP_006589727.1| PREDICTED: RNA-binding protein 39-like isofo... 88 1e-15
ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like isofo... 88 1e-15
>gb|EYU37971.1| hypothetical protein MIMGU_mgv1a003198mg [Mimulus guttatus]
Length = 600
Score = 105 bits (262), Expect = 6e-21
Identities = 61/91 (67%), Positives = 65/91 (71%), Gaps = 6/91 (6%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY------GVATTASVLGQTSGQMLP 163
N+AD DDD G+GLSLNA SRALLMQKLDRTGTASS V V GQTS +LP
Sbjct: 423 NIADFDDDGGSGLSLNAHSRALLMQKLDRTGTASSITGPPAAPVFGAPPVFGQTSVALLP 482
Query: 164 GLTAAAFPMPALTVPAIDTIGVPSECLLLKN 256
GL AA MPALT +IDT GVPSECLLLKN
Sbjct: 483 GLAAAGLAMPALTASSIDT-GVPSECLLLKN 512
>ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Populus trichocarpa]
gi|550331684|gb|EEE86903.2| hypothetical protein
POPTR_0009s13940g [Populus trichocarpa]
Length = 599
Score = 97.4 bits (241), Expect = 2e-18
Identities = 57/104 (54%), Positives = 68/104 (65%), Gaps = 19/104 (18%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGTAS----SYGVAT--TASVLGQT------ 145
N+ D DDDEG GL+LNA+SRALLMQKLDRTGTAS S G T TA +LG
Sbjct: 408 NVGDFDDDEGGGLALNARSRALLMQKLDRTGTASSITGSLGTPTLPTAPILGAAPAVSPA 467
Query: 146 -----SGQML--PGLTAAAFPMPALTVPAIDTIGVPSECLLLKN 256
SG +L PGL A +PA T+P ++TIGVPS+C+LLKN
Sbjct: 468 IAPLLSGSVLAIPGLPVAGLQLPATTIPTVETIGVPSDCILLKN 511
>ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Populus trichocarpa]
gi|550341316|gb|EEE86704.2| hypothetical protein
POPTR_0004s18320g [Populus trichocarpa]
Length = 609
Score = 94.7 bits (234), Expect = 1e-17
Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 19/104 (18%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGTAS----SYGVAT--TASVLGQT------ 145
N+ D DDDEG GL+LNA+SRALLMQKLDRTGTAS S G T TA +LG T
Sbjct: 418 NVGDFDDDEGGGLALNARSRALLMQKLDRTGTASSIAGSLGTPTLPTAPILGATPVVSPA 477
Query: 146 -----SGQM--LPGLTAAAFPMPALTVPAIDTIGVPSECLLLKN 256
SG + +PGL +PA +P +DTIGVPS+CL LKN
Sbjct: 478 VAPLLSGSVPAIPGLPVPGLQLPATAIPTMDTIGVPSDCLFLKN 521
>ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Fragaria vesca subsp.
vesca]
Length = 588
Score = 92.4 bits (228), Expect = 6e-17
Identities = 53/100 (53%), Positives = 63/100 (63%), Gaps = 15/100 (15%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVATT----ASVLGQTSG------ 151
N D DDDEG GLSLNA+SRA+LMQKLDR+G+ SS V +T A +LG G
Sbjct: 400 NAGDFDDDEGGGLSLNARSRAILMQKLDRSGSGSSLAVNSTGLPVAPILGAAPGISSLVA 459
Query: 152 --QMLPGLTAAAFP---MPALTVPAIDTIGVPSECLLLKN 256
+PGL P +P TVP++DTIGVPSECLLL N
Sbjct: 460 PMASVPGLAGLGVPGLQIPTATVPSVDTIGVPSECLLLTN 499
>ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata] gi|297331927|gb|EFH62346.1| hypothetical protein
ARALYDRAFT_480573 [Arabidopsis lyrata subsp. lyrata]
Length = 557
Score = 92.0 bits (227), Expect = 7e-17
Identities = 53/91 (58%), Positives = 60/91 (65%), Gaps = 9/91 (9%)
Frame = +2
Query: 11 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVATTASVLG---QTSGQMLPGLTAAA 181
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ T AS+ G S P L +
Sbjct: 377 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASIHGGVSTISSLAAPALVQGS 436
Query: 182 FPMPA------LTVPAIDTIGVPSECLLLKN 256
FP A + ID +GVPSECLLLKN
Sbjct: 437 FPAVAGLAGAGIIPGVIDPVGVPSECLLLKN 467
>ref|XP_007041785.1| Splicing factor isoform 4 [Theobroma cacao]
gi|508705720|gb|EOX97616.1| Splicing factor isoform 4
[Theobroma cacao]
Length = 452
Score = 90.9 bits (224), Expect = 2e-16
Identities = 57/110 (51%), Positives = 65/110 (59%), Gaps = 25/110 (22%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGTAS----SYGV--------ATTASVLG-- 139
N ADLDDDEG GLSLN+ SRALLM KLDR+GTAS S GV ATTA+VLG
Sbjct: 251 NAADLDDDEGGGLSLNSSSRALLMAKLDRSGTASSITGSVGVAGNSTGLTATTATVLGAA 310
Query: 140 -----------QTSGQMLPGLTAAAFPMPALTVPAIDTIGVPSECLLLKN 256
Q + + GL +P+ +P IDTIG PSECLLLKN
Sbjct: 311 PAVPSLVPPTLQAHVRTISGLPGVGLQLPSNGIPTIDTIGTPSECLLLKN 360
>ref|XP_007041782.1| Splicing factor isoform 1 [Theobroma cacao]
gi|590684187|ref|XP_007041783.1| Splicing factor isoform
1 [Theobroma cacao] gi|508705717|gb|EOX97613.1| Splicing
factor isoform 1 [Theobroma cacao]
gi|508705718|gb|EOX97614.1| Splicing factor isoform 1
[Theobroma cacao]
Length = 581
Score = 90.9 bits (224), Expect = 2e-16
Identities = 57/110 (51%), Positives = 65/110 (59%), Gaps = 25/110 (22%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGTAS----SYGV--------ATTASVLG-- 139
N ADLDDDEG GLSLN+ SRALLM KLDR+GTAS S GV ATTA+VLG
Sbjct: 380 NAADLDDDEGGGLSLNSSSRALLMAKLDRSGTASSITGSVGVAGNSTGLTATTATVLGAA 439
Query: 140 -----------QTSGQMLPGLTAAAFPMPALTVPAIDTIGVPSECLLLKN 256
Q + + GL +P+ +P IDTIG PSECLLLKN
Sbjct: 440 PAVPSLVPPTLQAHVRTISGLPGVGLQLPSNGIPTIDTIGTPSECLLLKN 489
>ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Capsella rubella]
gi|482568547|gb|EOA32736.1| hypothetical protein
CARUB_v10016041mg [Capsella rubella]
Length = 550
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/95 (53%), Positives = 61/95 (64%), Gaps = 13/95 (13%)
Frame = +2
Query: 11 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVATTASVLG---QTSGQMLPGLTAAA 181
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ T AS+ G S P L +
Sbjct: 366 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASIHGGVSTISPLAAPALLQGS 425
Query: 182 FP----------MPALTVPAIDTIGVPSECLLLKN 256
FP +P + +D +G+PSECLLLKN
Sbjct: 426 FPAVAGLAGAGIIPGVIPAVLDPVGIPSECLLLKN 460
>gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 90.9 bits (224), Expect = 2e-16
Identities = 53/94 (56%), Positives = 59/94 (62%), Gaps = 12/94 (12%)
Frame = +2
Query: 11 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVATTASVLG---QTSGQMLPGLTAAA 181
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ T AS G S P L +
Sbjct: 377 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASFNGGVSTISSLAAPALVQGS 436
Query: 182 FP---------MPALTVPAIDTIGVPSECLLLKN 256
FP +P + D IGVPSECLLLKN
Sbjct: 437 FPAVAGLAGGIIPGVIPAGFDPIGVPSECLLLKN 470
>ref|XP_006409370.1| hypothetical protein EUTSA_v10022624mg [Eutrema salsugineum]
gi|557110532|gb|ESQ50823.1| hypothetical protein
EUTSA_v10022624mg [Eutrema salsugineum]
Length = 566
Score = 90.5 bits (223), Expect = 2e-16
Identities = 52/98 (53%), Positives = 63/98 (64%), Gaps = 13/98 (13%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVATTASVLG--QTSGQMLPGLTA 175
N DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ S+ G T ++ L
Sbjct: 381 NTGDLDDDDGAGLSLNAQSRALLMQKLDRSGTASSTGLTAAGSIHGAASTISPLVAPLVQ 440
Query: 176 AAFP----------MPALTVP-AIDTIGVPSECLLLKN 256
FP +P + +P A+D +GVPSECLLLKN
Sbjct: 441 GGFPPVAGLAGVGNVPGVNMPAALDPVGVPSECLLLKN 478
>ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 610
Score = 90.5 bits (223), Expect = 2e-16
Identities = 53/95 (55%), Positives = 59/95 (62%), Gaps = 13/95 (13%)
Frame = +2
Query: 11 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVATTASVLG---QTSGQMLPGLTAAA 181
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ T AS G S P L +
Sbjct: 426 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASFNGGVSTISSLAAPALVQGS 485
Query: 182 FP----------MPALTVPAIDTIGVPSECLLLKN 256
FP +P + D IGVPSECLLLKN
Sbjct: 486 FPAVAGLAGSGIIPGVIPAGFDPIGVPSECLLLKN 520
>ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 599
Score = 90.5 bits (223), Expect = 2e-16
Identities = 53/95 (55%), Positives = 59/95 (62%), Gaps = 13/95 (13%)
Frame = +2
Query: 11 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVATTASVLG---QTSGQMLPGLTAAA 181
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ T AS G S P L +
Sbjct: 415 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASFNGGVSTISSLAAPALVQGS 474
Query: 182 FP----------MPALTVPAIDTIGVPSECLLLKN 256
FP +P + D IGVPSECLLLKN
Sbjct: 475 FPAVAGLAGSGIIPGVIPAGFDPIGVPSECLLLKN 509
>gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 90.5 bits (223), Expect = 2e-16
Identities = 53/95 (55%), Positives = 59/95 (62%), Gaps = 13/95 (13%)
Frame = +2
Query: 11 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVATTASVLG---QTSGQMLPGLTAAA 181
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ T AS G S P L +
Sbjct: 236 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASFNGGVSTISSLAAPALVQGS 295
Query: 182 FP----------MPALTVPAIDTIGVPSECLLLKN 256
FP +P + D IGVPSECLLLKN
Sbjct: 296 FPAVAGLAGSGIIPGVIPAGFDPIGVPSECLLLKN 330
>ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor
[Arabidopsis thaliana] gi|133778824|gb|ABO38752.1|
At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 561
Score = 90.5 bits (223), Expect = 2e-16
Identities = 53/95 (55%), Positives = 59/95 (62%), Gaps = 13/95 (13%)
Frame = +2
Query: 11 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVATTASVLG---QTSGQMLPGLTAAA 181
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ T AS G S P L +
Sbjct: 377 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASFNGGVSTISSLAAPALVQGS 436
Query: 182 FP----------MPALTVPAIDTIGVPSECLLLKN 256
FP +P + D IGVPSECLLLKN
Sbjct: 437 FPAVAGLAGSGIIPGVIPAGFDPIGVPSECLLLKN 471
>gb|EXC16553.1| RNA-binding protein 39 [Morus notabilis]
Length = 811
Score = 89.7 bits (221), Expect = 4e-16
Identities = 56/108 (51%), Positives = 67/108 (62%), Gaps = 23/108 (21%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGTAS-----------SYGVA-TTASVLGQT 145
N D DDD+G GL+LNA+SRALLMQKLDR+GTA+ S G+A TA +LG
Sbjct: 281 NTGDFDDDDGGGLALNARSRALLMQKLDRSGTATNITGSPGTPAVSTGLALPTAPILGAA 340
Query: 146 ------SGQMLP-----GLTAAAFPMPALTVPAIDTIGVPSECLLLKN 256
S + P GL A F +PA+TVP+IDTIG PSECL LKN
Sbjct: 341 PVVSPLSASVAPIPALAGLGGAGFQVPAVTVPSIDTIGAPSECLQLKN 388
>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 89.4 bits (220), Expect = 5e-16
Identities = 56/111 (50%), Positives = 65/111 (58%), Gaps = 26/111 (23%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGT----ASSYG---------VATTASVLG- 139
N D DDDEG GLSLNA+SRA+LMQKLDR+GT A S G +TA +LG
Sbjct: 411 NAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGA 470
Query: 140 ------------QTSGQMLPGLTAAAFPMPALTVPAIDTIGVPSECLLLKN 256
Q L GL A +PA+TVP+IDTIGVPSECL+LKN
Sbjct: 471 APVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKN 521
>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 89.4 bits (220), Expect = 5e-16
Identities = 56/111 (50%), Positives = 65/111 (58%), Gaps = 26/111 (23%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGT----ASSYG---------VATTASVLG- 139
N D DDDEG GLSLNA+SRA+LMQKLDR+GT A S G +TA +LG
Sbjct: 229 NAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGA 288
Query: 140 ------------QTSGQMLPGLTAAAFPMPALTVPAIDTIGVPSECLLLKN 256
Q L GL A +PA+TVP+IDTIGVPSECL+LKN
Sbjct: 289 APVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKN 339
>ref|XP_004497188.1| PREDICTED: RNA-binding protein 39-like [Cicer arietinum]
Length = 613
Score = 88.6 bits (218), Expect = 8e-16
Identities = 54/114 (47%), Positives = 62/114 (54%), Gaps = 29/114 (25%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGTASS------------------------- 106
N D+DDDEG GLSLNA SRALLMQKLDR+GTASS
Sbjct: 412 NTGDIDDDEGGGLSLNASSRALLMQKLDRSGTASSMVGFLGNSAVNNTGVNLQATGNIPA 471
Query: 107 ---YGVATTASVLGQTSG-QMLPGLTAAAFPMPALTVPAIDTIGVPSECLLLKN 256
G A S++ S L GL F +P LT P+I+TIGVPSECLLL+N
Sbjct: 472 GALLGAAPVGSLVSSLSSVPALAGLPGGGFQIPILTSPSIETIGVPSECLLLRN 525
>ref|XP_006589727.1| PREDICTED: RNA-binding protein 39-like isoform X2 [Glycine max]
Length = 421
Score = 88.2 bits (217), Expect = 1e-15
Identities = 51/96 (53%), Positives = 59/96 (61%), Gaps = 11/96 (11%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY-------GVATTASVLGQTSGQM- 157
N D DDDEG GLSLNA SRA+LMQKLDR+GTASS GV T L T +
Sbjct: 238 NTGDFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVGSIGNSGVNNTGLNLPATGNILA 297
Query: 158 ---LPGLTAAAFPMPALTVPAIDTIGVPSECLLLKN 256
+ GL +P T+P+ID IGVPSECL+LKN
Sbjct: 298 AAPVGGLAGGGLQIPTATIPSIDPIGVPSECLMLKN 333
>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like isoform X1 [Glycine max]
Length = 597
Score = 88.2 bits (217), Expect = 1e-15
Identities = 51/96 (53%), Positives = 59/96 (61%), Gaps = 11/96 (11%)
Frame = +2
Query: 2 NLADLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY-------GVATTASVLGQTSGQM- 157
N D DDDEG GLSLNA SRA+LMQKLDR+GTASS GV T L T +
Sbjct: 414 NTGDFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVGSIGNSGVNNTGLNLPATGNILA 473
Query: 158 ---LPGLTAAAFPMPALTVPAIDTIGVPSECLLLKN 256
+ GL +P T+P+ID IGVPSECL+LKN
Sbjct: 474 AAPVGGLAGGGLQIPTATIPSIDPIGVPSECLMLKN 509