BLASTX nr result
ID: Mentha29_contig00007910
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00007910
(1018 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU27635.1| hypothetical protein MIMGU_mgv1a013403mg [Mimulus... 213 8e-53
ref|XP_006350243.1| PREDICTED: DNA-directed RNA polymerases IV a... 166 1e-38
gb|EPS73262.1| hypothetical protein M569_01493, partial [Genlise... 163 1e-37
ref|XP_002274855.1| PREDICTED: uncharacterized protein LOC100246... 152 2e-34
ref|XP_002525033.1| conserved hypothetical protein [Ricinus comm... 151 5e-34
ref|XP_006373571.1| hypothetical protein POPTR_0016s00490g [Popu... 150 1e-33
ref|XP_004236644.1| PREDICTED: uncharacterized protein LOC101254... 149 1e-33
ref|XP_004293416.1| PREDICTED: uncharacterized protein LOC101305... 147 7e-33
ref|XP_007211941.1| hypothetical protein PRUPE_ppa010773mg [Prun... 147 7e-33
ref|XP_007211940.1| hypothetical protein PRUPE_ppa010773mg [Prun... 147 7e-33
ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II su... 145 2e-32
ref|XP_006398486.1| hypothetical protein EUTSA_v10001026mg [Eutr... 145 3e-32
ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213... 144 4e-32
ref|XP_006467223.1| PREDICTED: DNA-directed RNA polymerases IV a... 141 5e-31
ref|XP_006449991.1| hypothetical protein CICLE_v10016499mg [Citr... 141 5e-31
gb|AFK45778.1| unknown [Medicago truncatula] 139 2e-30
ref|XP_003594343.1| DNA-directed RNA polymerase II subunit rpb4 ... 139 2e-30
ref|XP_007026413.1| DNA-directed RNA polymerase II subunit rpb4,... 138 4e-30
ref|XP_007026415.1| DNA-directed RNA polymerase II subunit rpb4,... 137 7e-30
ref|XP_006467222.1| PREDICTED: DNA-directed RNA polymerases IV a... 135 3e-29
>gb|EYU27635.1| hypothetical protein MIMGU_mgv1a013403mg [Mimulus guttatus]
Length = 221
Score = 213 bits (543), Expect = 8e-53
Identities = 120/205 (58%), Positives = 135/205 (65%), Gaps = 6/205 (2%)
Frame = -1
Query: 991 MAEKGGKGNLPVKEGKSALKSPVXXXXXXXXXXXXXKVQFGSQDSTETYTPSSNXXXXXX 812
MAEKGGKG +P K GKSALKSPV VQF S+DS E+ P SN
Sbjct: 1 MAEKGGKGYVPPKGGKSALKSPVSNGDKSKKGKA---VQFDSEDSFESDIPKSNGEKGSA 57
Query: 811 XXXXXXXXXXXXXXXXXXGS------TPVERRLEQELPPNSVCLMDCEAADILQSIQDQM 650
+ E+ L LPPNSVCLMDCEAA+ILQ IQDQM
Sbjct: 58 PAGKGGKGGKGEKVANGTKKPTAKAPSSTEKTLVDGLPPNSVCLMDCEAAEILQGIQDQM 117
Query: 649 VILSQDPDIKLPASFDAGLTYAKRGGSDAKPETVRRIFEPLKKHGVSDSEICLIANVCPE 470
V+LSQDPDIKLP SFD GL+YAKRGG+ AKP+TV++IFEPLKKHGVS+SEICLI+NV PE
Sbjct: 118 VVLSQDPDIKLPVSFDMGLSYAKRGGNLAKPQTVKKIFEPLKKHGVSESEICLISNVGPE 177
Query: 469 SADEVFAAVPALKPKMIKLKDPLRI 395
+ DEVFA VPALKPKM LK PLRI
Sbjct: 178 TVDEVFALVPALKPKMSTLKGPLRI 202
>ref|XP_006350243.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
[Solanum tuberosum]
Length = 220
Score = 166 bits (420), Expect = 1e-38
Identities = 100/206 (48%), Positives = 117/206 (56%), Gaps = 9/206 (4%)
Frame = -1
Query: 991 MAEKGGKGNLPVKEGKSALKSPVXXXXXXXXXXXXXK--VQFGSQDSTETYTPSSNXXXX 818
MAEKGGKG K GKSALKSP VQF S+ S +T + SN
Sbjct: 1 MAEKGGKGFSLPKSGKSALKSPASKGKDDSSVKSKRGRKVQFDSEGSLDTNSTKSNGKAD 60
Query: 817 XXXXXXXXXXXXXXXXXXXXGST-------PVERRLEQELPPNSVCLMDCEAADILQSIQ 659
G + P+E R+EQELP NS CLMDCEAADILQ IQ
Sbjct: 61 IPSLKGDLGKAGKGEKAGSAGKSQKAKAPDPLELRVEQELPANSTCLMDCEAADILQGIQ 120
Query: 658 DQMVILSQDPDIKLPASFDAGLTYAKRGGSDAKPETVRRIFEPLKKHGVSDSEICLIANV 479
+ MV+LS DP IKLP SFD GL YA+R P+ V++I EPLK+HGVSD E+C+IAN
Sbjct: 121 ENMVVLSDDPAIKLPVSFDRGLAYAQRNRLYDNPQAVKQILEPLKQHGVSDGELCMIANF 180
Query: 478 CPESADEVFAAVPALKPKMIKLKDPL 401
ES DEVFA VP+ K K KL+ PL
Sbjct: 181 PLESVDEVFALVPSFKNKKSKLRVPL 206
>gb|EPS73262.1| hypothetical protein M569_01493, partial [Genlisea aurea]
Length = 124
Score = 163 bits (412), Expect = 1e-37
Identities = 81/109 (74%), Positives = 90/109 (82%)
Frame = -1
Query: 721 LPPNSVCLMDCEAADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRGGSDAKPETVRR 542
LPPNSV LMD EAADILQ IQDQMV LSQDPDIKLP SFD GL YAKR + KP+TVR+
Sbjct: 4 LPPNSVYLMDSEAADILQGIQDQMVFLSQDPDIKLPVSFDKGLAYAKRCENRVKPQTVRK 63
Query: 541 IFEPLKKHGVSDSEICLIANVCPESADEVFAAVPALKPKMIKLKDPLRI 395
I EPLKKHGVSD+EICLI+NV PES DEVF+ +P LKP + KLK PL+I
Sbjct: 64 ILEPLKKHGVSDAEICLISNVSPESTDEVFSLIPTLKPNVGKLKGPLKI 112
>ref|XP_002274855.1| PREDICTED: uncharacterized protein LOC100246461 isoform 1 [Vitis
vinifera] gi|359495604|ref|XP_003635035.1| PREDICTED:
uncharacterized protein LOC100246461 isoform 2 [Vitis
vinifera] gi|297736694|emb|CBI25730.3| unnamed protein
product [Vitis vinifera]
Length = 239
Score = 152 bits (385), Expect = 2e-34
Identities = 71/117 (60%), Positives = 92/117 (78%)
Frame = -1
Query: 748 PVERRLEQELPPNSVCLMDCEAADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRGGS 569
P+E R+EQELP N+ C+MDCEAA IL+ IQ+QMV+LS+DP IK+P SF+ GL YA+
Sbjct: 98 PLELRIEQELPKNAKCMMDCEAALILKGIQEQMVVLSEDPTIKIPLSFNKGLQYAQSSNC 157
Query: 568 DAKPETVRRIFEPLKKHGVSDSEICLIANVCPESADEVFAAVPALKPKMIKLKDPLR 398
A P++VR + EPL K+GVSD EIC+IAN CPE+ DEVFA VP+LKPK L++PL+
Sbjct: 158 YASPQSVRLVLEPLSKYGVSDGEICVIANTCPETIDEVFALVPSLKPKWSTLREPLK 214
>ref|XP_002525033.1| conserved hypothetical protein [Ricinus communis]
gi|223535695|gb|EEF37360.1| conserved hypothetical
protein [Ricinus communis]
Length = 203
Score = 151 bits (381), Expect = 5e-34
Identities = 71/117 (60%), Positives = 90/117 (76%)
Frame = -1
Query: 748 PVERRLEQELPPNSVCLMDCEAADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRGGS 569
P+E ++EQ+LP N+ CLMDCEAA +LQ IQ+QMV+LS+DP IKLP SFD L +A+ G
Sbjct: 74 PLELKIEQDLPKNAKCLMDCEAAQVLQGIQEQMVLLSRDPTIKLPVSFDRALQHARTGAR 133
Query: 568 DAKPETVRRIFEPLKKHGVSDSEICLIANVCPESADEVFAAVPALKPKMIKLKDPLR 398
P++VRRI E LKKHGVS+ EIC IANVCP+ DEVFA VP+LK K L++PL+
Sbjct: 134 FTNPQSVRRILEGLKKHGVSEGEICTIANVCPDGVDEVFALVPSLKSKKNVLREPLK 190
>ref|XP_006373571.1| hypothetical protein POPTR_0016s00490g [Populus trichocarpa]
gi|550320481|gb|ERP51368.1| hypothetical protein
POPTR_0016s00490g [Populus trichocarpa]
Length = 197
Score = 150 bits (378), Expect = 1e-33
Identities = 91/199 (45%), Positives = 109/199 (54%), Gaps = 1/199 (0%)
Frame = -1
Query: 991 MAEKGGKG-NLPVKEGKSALKSPVXXXXXXXXXXXXXKVQFGSQDSTETYTPSSNXXXXX 815
M + GGKG +LP KE KS+LKS G DS
Sbjct: 1 MEKGGGKGFSLPSKEPKSSLKSSSTK---------------GKDDSNNGRKIHFESEGNL 45
Query: 814 XXXXXXXXXXXXXXXXXXXGSTPVERRLEQELPPNSVCLMDCEAADILQSIQDQMVILSQ 635
P+E ++E ELP N+ LMDCEAA ILQ IQDQMV+LSQ
Sbjct: 46 SKGGKGGKIANGGKSPMTKEPPPLELKIESELPQNAKPLMDCEAAQILQGIQDQMVLLSQ 105
Query: 634 DPDIKLPASFDAGLTYAKRGGSDAKPETVRRIFEPLKKHGVSDSEICLIANVCPESADEV 455
DP IKLP SFD GL YAK G P++VRR+ E L+K+GVSD EI LIANV PE+ADE
Sbjct: 106 DPTIKLPVSFDKGLQYAKNGAHYTNPQSVRRVLEALRKYGVSDGEISLIANVFPETADEA 165
Query: 454 FAAVPALKPKMIKLKDPLR 398
FA VP+LK K L++PL+
Sbjct: 166 FALVPSLKSKASTLREPLK 184
>ref|XP_004236644.1| PREDICTED: uncharacterized protein LOC101254374 [Solanum
lycopersicum]
Length = 220
Score = 149 bits (377), Expect = 1e-33
Identities = 92/206 (44%), Positives = 112/206 (54%), Gaps = 9/206 (4%)
Frame = -1
Query: 991 MAEKGGKGNLPVKEGKSALKSPVXXXXXXXXXXXXXK--VQFGSQDSTETYTPSSNXXXX 818
MAEKGGKG K GKS+LKSP VQF S+ S +T + SN
Sbjct: 1 MAEKGGKGFSLPKSGKSSLKSPASKGKDDSSAKSKRGRKVQFDSEGSLDTNSTKSNGKAD 60
Query: 817 XXXXXXXXXXXXXXXXXXXXGST-------PVERRLEQELPPNSVCLMDCEAADILQSIQ 659
G + P+E R+EQEL + C+MDCEAADILQ IQ
Sbjct: 61 IPSFKGDLGKAGKGEKAGSAGKSQKAKAPDPLELRVEQELSTKTTCMMDCEAADILQGIQ 120
Query: 658 DQMVILSQDPDIKLPASFDAGLTYAKRGGSDAKPETVRRIFEPLKKHGVSDSEICLIANV 479
+ MV+LS DP IKLP SFD GL Y +R P+ V +I PLK+HGVSD E+C+IAN
Sbjct: 121 ENMVVLSDDPAIKLPVSFDRGLAYGQRIRLYDNPQAVEQILGPLKQHGVSDGELCMIANF 180
Query: 478 CPESADEVFAAVPALKPKMIKLKDPL 401
ES DEVFA VP+ K + KL+ PL
Sbjct: 181 PLESVDEVFAFVPSFKNRKSKLRVPL 206
>ref|XP_004293416.1| PREDICTED: uncharacterized protein LOC101305540 [Fragaria vesca
subsp. vesca]
Length = 196
Score = 147 bits (371), Expect = 7e-33
Identities = 87/204 (42%), Positives = 114/204 (55%), Gaps = 7/204 (3%)
Frame = -1
Query: 991 MAEKGGKGNLPV-----KEGKSALK--SPVXXXXXXXXXXXXXKVQFGSQDSTETYTPSS 833
M++KGGKG V K GKS+LK +P VQF SQ + T S
Sbjct: 1 MSDKGGKGFTAVPKGKGKGGKSSLKEATPKGKDDGPAKSKKTRNVQFSSQAAASTKANSG 60
Query: 832 NXXXXXXXXXXXXXXXXXXXXXXXXGSTPVERRLEQELPPNSVCLMDCEAADILQSIQDQ 653
P++ +LE ELP + CLMDCEAADILQ +QD
Sbjct: 61 KGGQADGGAKKD--------------KEPLQLKLENELPKGAKCLMDCEAADILQGVQDH 106
Query: 652 MVILSQDPDIKLPASFDAGLTYAKRGGSDAKPETVRRIFEPLKKHGVSDSEICLIANVCP 473
MVILS+DP IKLP SFD L Y ++ + PE+VR++ + LK +GV+D EIC++ANV P
Sbjct: 107 MVILSKDPSIKLPVSFDRALQYTEKSTNYTDPESVRQVLQNLKTYGVTDGEICVMANVYP 166
Query: 472 ESADEVFAAVPALKPKMIKLKDPL 401
E+ADEVFA +P+LK + I L DP+
Sbjct: 167 ETADEVFALLPSLKARRIMLDDPV 190
>ref|XP_007211941.1| hypothetical protein PRUPE_ppa010773mg [Prunus persica]
gi|462407806|gb|EMJ13140.1| hypothetical protein
PRUPE_ppa010773mg [Prunus persica]
Length = 237
Score = 147 bits (371), Expect = 7e-33
Identities = 70/117 (59%), Positives = 89/117 (76%)
Frame = -1
Query: 748 PVERRLEQELPPNSVCLMDCEAADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRGGS 569
P+E ++EQELP ++ CLMDCEAADILQ IQ+QM++LS+DP IK+P SFD GL YAKR
Sbjct: 108 PLELKIEQELPQSAKCLMDCEAADILQGIQEQMILLSKDPTIKIPVSFDKGLQYAKRTSH 167
Query: 568 DAKPETVRRIFEPLKKHGVSDSEICLIANVCPESADEVFAAVPALKPKMIKLKDPLR 398
P++VR++ E L K+GVSD EI +IANVCPE+ DEVFA VP+LK L PL+
Sbjct: 168 YTNPQSVRKVLETLTKYGVSDGEISVIANVCPETTDEVFALVPSLKTTRSVLSQPLK 224
>ref|XP_007211940.1| hypothetical protein PRUPE_ppa010773mg [Prunus persica]
gi|462407805|gb|EMJ13139.1| hypothetical protein
PRUPE_ppa010773mg [Prunus persica]
Length = 225
Score = 147 bits (371), Expect = 7e-33
Identities = 70/117 (59%), Positives = 89/117 (76%)
Frame = -1
Query: 748 PVERRLEQELPPNSVCLMDCEAADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRGGS 569
P+E ++EQELP ++ CLMDCEAADILQ IQ+QM++LS+DP IK+P SFD GL YAKR
Sbjct: 96 PLELKIEQELPQSAKCLMDCEAADILQGIQEQMILLSKDPTIKIPVSFDKGLQYAKRTSH 155
Query: 568 DAKPETVRRIFEPLKKHGVSDSEICLIANVCPESADEVFAAVPALKPKMIKLKDPLR 398
P++VR++ E L K+GVSD EI +IANVCPE+ DEVFA VP+LK L PL+
Sbjct: 156 YTNPQSVRKVLETLTKYGVSDGEISVIANVCPETTDEVFALVPSLKTTRSVLSQPLK 212
>ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb4-like
[Cucumis sativus]
Length = 220
Score = 145 bits (367), Expect = 2e-32
Identities = 89/207 (42%), Positives = 111/207 (53%), Gaps = 10/207 (4%)
Frame = -1
Query: 991 MAEKGGKG-NLPVKEGKSALKSPVXXXXXXXXXXXXXK-------VQFGSQDSTETYTPS 836
M+EKG KG ++ K KS+LKS VQF +Q S +
Sbjct: 1 MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDATNTF 60
Query: 835 SNXXXXXXXXXXXXXXXXXXXXXXXXGSTPVERRLEQELPPN--SVCLMDCEAADILQSI 662
S +E ++EQELP N CLMDCEAA +LQ I
Sbjct: 61 SMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELPKNVKCQCLMDCEAAQLLQGI 120
Query: 661 QDQMVILSQDPDIKLPASFDAGLTYAKRGGSDAKPETVRRIFEPLKKHGVSDSEICLIAN 482
QDQMV LS DP IK+P SFD GL YAKR E+VR + E LKK+GV+DSEIC+IAN
Sbjct: 121 QDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIAN 180
Query: 481 VCPESADEVFAAVPALKPKMIKLKDPL 401
VCP++ DEVFA +P+LK K KL +P+
Sbjct: 181 VCPDTTDEVFALLPSLKRKRSKLSEPI 207
>ref|XP_006398486.1| hypothetical protein EUTSA_v10001026mg [Eutrema salsugineum]
gi|557099575|gb|ESQ39939.1| hypothetical protein
EUTSA_v10001026mg [Eutrema salsugineum]
Length = 208
Score = 145 bits (366), Expect = 3e-32
Identities = 67/118 (56%), Positives = 87/118 (73%)
Frame = -1
Query: 754 STPVERRLEQELPPNSVCLMDCEAADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRG 575
S P+E + E+ELP N+ CLMDCEA IL+ I++Q+ +LS DP IK+P SF+ GL Y K G
Sbjct: 80 SQPLELKTEKELPENAKCLMDCEAFQILEGIKEQLAVLSDDPSIKIPVSFNRGLEYLKLG 139
Query: 574 GSDAKPETVRRIFEPLKKHGVSDSEICLIANVCPESADEVFAAVPALKPKMIKLKDPL 401
P++ R+I EPLKKHGVS+ E+C+IANVCPES DEVFA VP++K K K+ PL
Sbjct: 140 SCYTNPQSARQILEPLKKHGVSEGELCMIANVCPESIDEVFAFVPSMKGKKDKISQPL 197
>ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213971 [Cucumis sativus]
Length = 242
Score = 144 bits (364), Expect = 4e-32
Identities = 88/207 (42%), Positives = 111/207 (53%), Gaps = 10/207 (4%)
Frame = -1
Query: 991 MAEKGGKG-NLPVKEGKSALKSPVXXXXXXXXXXXXXK-------VQFGSQDSTETYTPS 836
M+EKG KG ++ + KS+LKS VQF +Q S +
Sbjct: 1 MSEKGEKGFSVQKRPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDATNTF 60
Query: 835 SNXXXXXXXXXXXXXXXXXXXXXXXXGSTPVERRLEQELPPN--SVCLMDCEAADILQSI 662
S +E ++EQELP N CLMDCEAA +LQ I
Sbjct: 61 SMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELPKNVKCQCLMDCEAAQLLQGI 120
Query: 661 QDQMVILSQDPDIKLPASFDAGLTYAKRGGSDAKPETVRRIFEPLKKHGVSDSEICLIAN 482
QDQMV LS DP IK+P SFD GL YAKR E+VR + E LKK+GV+DSEIC+IAN
Sbjct: 121 QDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIAN 180
Query: 481 VCPESADEVFAAVPALKPKMIKLKDPL 401
VCP++ DEVFA +P+LK K KL +P+
Sbjct: 181 VCPDTTDEVFALLPSLKRKRSKLSEPI 207
>ref|XP_006467223.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
isoform X2 [Citrus sinensis]
Length = 225
Score = 141 bits (355), Expect = 5e-31
Identities = 65/117 (55%), Positives = 86/117 (73%)
Frame = -1
Query: 748 PVERRLEQELPPNSVCLMDCEAADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRGGS 569
P+E R+EQELP N+ CLMDCEAA IL+ IQ+QM +LS DP IK+P SFD GL YAK
Sbjct: 97 PLELRVEQELPKNAKCLMDCEAAHILEGIQEQMALLSADPTIKIPVSFDKGLLYAKTHSH 156
Query: 568 DAKPETVRRIFEPLKKHGVSDSEICLIANVCPESADEVFAAVPALKPKMIKLKDPLR 398
P+ V+ +F+ L +HGV+D EIC+IAN+CPE+ +E +A VP+LK K +L D L+
Sbjct: 157 FTNPQAVKGLFQSLSEHGVTDGEICVIANICPETVEEAYAIVPSLKAKRSRLNDLLK 213
>ref|XP_006449991.1| hypothetical protein CICLE_v10016499mg [Citrus clementina]
gi|557552602|gb|ESR63231.1| hypothetical protein
CICLE_v10016499mg [Citrus clementina]
Length = 225
Score = 141 bits (355), Expect = 5e-31
Identities = 65/117 (55%), Positives = 86/117 (73%)
Frame = -1
Query: 748 PVERRLEQELPPNSVCLMDCEAADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRGGS 569
P+E R+EQELP N+ CLMDCEAA IL+ IQ+QM +LS DP IK+P SFD GL YAK
Sbjct: 97 PLELRVEQELPKNAKCLMDCEAAHILEGIQEQMALLSADPTIKIPVSFDKGLLYAKTHSH 156
Query: 568 DAKPETVRRIFEPLKKHGVSDSEICLIANVCPESADEVFAAVPALKPKMIKLKDPLR 398
P+ V+ +F+ L +HGV+D EIC+IAN+CPE+ +E +A VP+LK K +L D L+
Sbjct: 157 FTNPQAVKGLFQSLSEHGVTDGEICVIANICPETVEEAYAIVPSLKAKRSRLNDLLK 213
>gb|AFK45778.1| unknown [Medicago truncatula]
Length = 201
Score = 139 bits (350), Expect = 2e-30
Identities = 69/108 (63%), Positives = 83/108 (76%), Gaps = 2/108 (1%)
Frame = -1
Query: 742 ERRLEQELPPNSVCLMDCEAADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRGGSD- 566
E R++QELP N CLMDCEAA +LQ IQDQMV LS+DP IK+PASFD GL YAK S
Sbjct: 72 EHRVDQELPENFKCLMDCEAAVMLQGIQDQMVALSRDPSIKMPASFDKGLYYAKSSSSSK 131
Query: 565 -AKPETVRRIFEPLKKHGVSDSEICLIANVCPESADEVFAAVPALKPK 425
+ PE+VR EPL H +++SEIC+IANVCPE+ADEVFA +P+LK K
Sbjct: 132 YSNPESVRHTLEPLMNHDLTESEICVIANVCPETADEVFALLPSLKSK 179
>ref|XP_003594343.1| DNA-directed RNA polymerase II subunit rpb4 [Medicago truncatula]
gi|124360902|gb|ABN08874.1| RNA polymerase Rpb4
[Medicago truncatula] gi|355483391|gb|AES64594.1|
DNA-directed RNA polymerase II subunit rpb4 [Medicago
truncatula]
Length = 223
Score = 139 bits (350), Expect = 2e-30
Identities = 69/108 (63%), Positives = 83/108 (76%), Gaps = 2/108 (1%)
Frame = -1
Query: 742 ERRLEQELPPNSVCLMDCEAADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRGGSD- 566
E R++QELP N CLMDCEAA +LQ IQDQMV LS+DP IK+PASFD GL YAK S
Sbjct: 94 EHRVDQELPENFKCLMDCEAAVMLQGIQDQMVALSRDPSIKMPASFDKGLYYAKSSSSSK 153
Query: 565 -AKPETVRRIFEPLKKHGVSDSEICLIANVCPESADEVFAAVPALKPK 425
+ PE+VR EPL H +++SEIC+IANVCPE+ADEVFA +P+LK K
Sbjct: 154 YSNPESVRHTLEPLMNHDLTESEICVIANVCPETADEVFALLPSLKSK 201
>ref|XP_007026413.1| DNA-directed RNA polymerase II subunit rpb4, putative isoform 1
[Theobroma cacao] gi|590627315|ref|XP_007026414.1|
DNA-directed RNA polymerase II subunit rpb4, putative
isoform 1 [Theobroma cacao] gi|508781779|gb|EOY29035.1|
DNA-directed RNA polymerase II subunit rpb4, putative
isoform 1 [Theobroma cacao] gi|508781780|gb|EOY29036.1|
DNA-directed RNA polymerase II subunit rpb4, putative
isoform 1 [Theobroma cacao]
Length = 231
Score = 138 bits (347), Expect = 4e-30
Identities = 69/116 (59%), Positives = 86/116 (74%)
Frame = -1
Query: 745 VERRLEQELPPNSVCLMDCEAADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRGGSD 566
+E R+EQELP N CLMDCEAA+IL+ IQ+QMV+LSQD IKLP SF GL YAK
Sbjct: 103 LELRVEQELPENVKCLMDCEAANILEGIQEQMVMLSQDSTIKLPESFHLGLQYAKTRSYY 162
Query: 565 AKPETVRRIFEPLKKHGVSDSEICLIANVCPESADEVFAAVPALKPKMIKLKDPLR 398
P++VRR+ E L K+GVS SEIC+IAN CPE+ DEVFA V +L+ K +L +PL+
Sbjct: 163 TNPQSVRRVLEALSKYGVSYSEICVIANTCPETVDEVFALVRSLEAKKSRLSEPLK 218
>ref|XP_007026415.1| DNA-directed RNA polymerase II subunit rpb4, putative isoform 3,
partial [Theobroma cacao] gi|508781781|gb|EOY29037.1|
DNA-directed RNA polymerase II subunit rpb4, putative
isoform 3, partial [Theobroma cacao]
Length = 214
Score = 137 bits (345), Expect = 7e-30
Identities = 94/214 (43%), Positives = 114/214 (53%), Gaps = 18/214 (8%)
Frame = -1
Query: 991 MAEKGGKG-NLPVKEG-KSALKSP-----VXXXXXXXXXXXXXKVQFGSQDSTET----Y 845
M+EKGGKG +LP K KSALKS KVQFG +
Sbjct: 1 MSEKGGKGFSLPTKTTPKSALKSTPASATARHDDNSAKSKRGRKVQFGMEGLPNLGFNFS 60
Query: 844 TPSSNXXXXXXXXXXXXXXXXXXXXXXXXGSTPV-------ERRLEQELPPNSVCLMDCE 686
+P S+ G PV E R+EQELP N CLMDCE
Sbjct: 61 SPKSDGKFAIPVGKGDWAKGGKGEKVVNGGKAPVAKEAKSLELRVEQELPENVKCLMDCE 120
Query: 685 AADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRGGSDAKPETVRRIFEPLKKHGVSD 506
AA+IL+ IQ+QMV+LSQD IKLP SF GL YAK P++VRR+ E L K+GVS
Sbjct: 121 AANILEGIQEQMVMLSQDSTIKLPESFHLGLQYAKTRSYYTNPQSVRRVLEALSKYGVSY 180
Query: 505 SEICLIANVCPESADEVFAAVPALKPKMIKLKDP 404
SEIC+IAN CPE+ DEVFA V +L+ K +L +P
Sbjct: 181 SEICVIANTCPETVDEVFALVRSLEAKKSRLSEP 214
>ref|XP_006467222.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
isoform X1 [Citrus sinensis]
Length = 237
Score = 135 bits (339), Expect = 3e-29
Identities = 61/106 (57%), Positives = 80/106 (75%)
Frame = -1
Query: 748 PVERRLEQELPPNSVCLMDCEAADILQSIQDQMVILSQDPDIKLPASFDAGLTYAKRGGS 569
P+E R+EQELP N+ CLMDCEAA IL+ IQ+QM +LS DP IK+P SFD GL YAK
Sbjct: 97 PLELRVEQELPKNAKCLMDCEAAHILEGIQEQMALLSADPTIKIPVSFDKGLLYAKTHSH 156
Query: 568 DAKPETVRRIFEPLKKHGVSDSEICLIANVCPESADEVFAAVPALK 431
P+ V+ +F+ L +HGV+D EIC+IAN+CPE+ +E +A VP+LK
Sbjct: 157 FTNPQAVKGLFQSLSEHGVTDGEICVIANICPETVEEAYAIVPSLK 202