BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00006934
         (2351 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU26093.1| hypothetical protein MIMGU_mgv1a027076mg [Mimulus...   630   e-178
ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containi...   482   e-133
ref|XP_002305195.1| pentatricopeptide repeat-containing family p...   472   e-130
ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containi...   465   e-128
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...   461   e-127
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]   459   e-126
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...   457   e-126
gb|EPS59968.1| hypothetical protein M569_14837 [Genlisea aurea]       454   e-125
ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containi...   449   e-123
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi...   448   e-123
ref|XP_007214531.1| hypothetical protein PRUPE_ppa014874mg, part...   441   e-121
ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containi...   433   e-118
gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis]     424   e-116
ref|XP_007022703.1| Pentatricopeptide repeat (PPR) superfamily p...   420   e-114
ref|XP_007022702.1| Pentatricopeptide repeat (PPR) superfamily p...   420   e-114
ref|XP_007022700.1| Pentatricopeptide repeat superfamily protein...   420   e-114
ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citr...   410   e-111
ref|XP_006391386.1| hypothetical protein EUTSA_v10018418mg [Eutr...   409   e-111
ref|XP_002887023.1| pentatricopeptide repeat-containing protein ...   399   e-108
ref|XP_007022704.1| Pentatricopeptide repeat (PPR) superfamily p...   398   e-108

>gb|EYU26093.1| hypothetical protein MIMGU_mgv1a027076mg [Mimulus guttatus]
          Length = 541

 Score =  630 bits (1625), Expect = e-178
 Identities = 321/482 (66%), Positives = 380/482 (78%), Gaps = 3/482 (0%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            ITS+I SL    SWKTLS+KF SLKFTN +V NILLQL++PI+SRKAL FFHW+ KEM F
Sbjct: 40   ITSLIDSLHERRSWKTLSEKFSSLKFTNQIVQNILLQLKEPINSRKALNFFHWSRKEMNF 99

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
            +HG+S+YCL IHILVK  LIKDAKA++ES+L KD  DG+S++  VL+SL++S   V+SVP
Sbjct: 100  EHGLSTYCLTIHILVKARLIKDAKALIESVLIKDFSDGDSRMLDVLESLIDSYAIVESVP 159

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVWGVYEL 1231
             VFDLF+QTCAKLR+VD ILDA +LL    F LSVI+FNT+LHV+ KS    LVW VYE 
Sbjct: 160  FVFDLFIQTCAKLRMVDDILDACKLLSRHDFPLSVISFNTILHVMIKSEKSRLVWSVYEH 219

Query: 1230 MIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKD 1051
            MI  R CPNE T + M+S LCKEGKLERFL IVDRMHGKR S+P+LIVNTCLVY MIE+D
Sbjct: 220  MISERMCPNEMTTRIMVSALCKEGKLERFLRIVDRMHGKRCSIPRLIVNTCLVYGMIEED 279

Query: 1050 RIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCS 871
            +I++GL LLK +LQK MILDTISYSLV+FAKVK+G+LD AKEIYEEMLKRGFEEN FVCS
Sbjct: 280  KIEEGLVLLKRILQKAMILDTISYSLVIFAKVKMGNLDNAKEIYEEMLKRGFEENVFVCS 339

Query: 870  LFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLN-GRLEESLEFCKHMMR 694
            LF+GAYC+EGRIDEA+GL EE+E LG KP +E FNHLIKGCS + GR E+ + FCK MM 
Sbjct: 340  LFIGAYCEEGRIDEAVGLFEEMESLGLKPFDETFNHLIKGCSSSYGRFEDGVVFCKKMMS 399

Query: 693  LGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEG 514
            +GL+PS SS+N MF KLC N KTK ADE+ T+LL+KGF  DE TYSHLV GY ++DD EG
Sbjct: 400  MGLVPSCSSVNEMFGKLCENAKTKEADEILTILLDKGFVADENTYSHLVCGYGKEDDVEG 459

Query: 513  LVKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEALI- 340
            L KLL EMEYR                C  GRLK+AEKY  +M++RS +PSPNVYE LI 
Sbjct: 460  LTKLLFEMEYRSISPNALGFSSVIVSFCNHGRLKDAEKYLGLMKSRSFIPSPNVYERLIS 519

Query: 339  GH 334
            GH
Sbjct: 520  GH 521



 Score = 67.8 bits (164), Expect = 2e-08
 Identities = 65/345 (18%), Positives = 138/345 (40%), Gaps = 15/345 (4%)
 Frame = -3

Query: 1593 FDHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSV 1414
            F   + S+  I+H+++K    +   ++ E ++++          +++ +L +  +    +
Sbjct: 190  FPLSVISFNTILHVMIKSEKSRLVWSVYEHMISERMCPNEMTTRIMVSALCKEGKLERFL 249

Query: 1413 PLVFDLFMQTCAKLRIV------------DGILDAFELL---FDKGFVLSVITFNTLLHV 1279
             +V  +  + C+  R++            D I +   LL     K  +L  I+++ ++  
Sbjct: 250  RIVDRMHGKRCSIPRLIVNTCLVYGMIEEDKIEEGLVLLKRILQKAMILDTISYSLVIFA 309

Query: 1278 LQKSGNVDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVP 1099
              K GN+D    +YE M+KR    N       I   C+EG+++  + + + M        
Sbjct: 310  KVKMGNLDNAKEIYEEMLKRGFEENVFVCSLFIGAYCEEGRIDEAVGLFEEMESLGLKPF 369

Query: 1098 QLIVNTCLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIY 919
                N  +        R +DG+   K M+   ++    S + +     +      A EI 
Sbjct: 370  DETFNHLIKGCSSSYGRFEDGVVFCKKMMSMGLVPSCSSVNEMFGKLCENAKTKEADEIL 429

Query: 918  EEMLKRGFEENSFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLN 739
              +L +GF  +    S  V  Y  E  ++    LL E+E     P+   F+ +I     +
Sbjct: 430  TILLDKGFVADENTYSHLVCGYGKEDDVEGLTKLLFEMEYRSISPNALGFSSVIVSFCNH 489

Query: 738  GRLEESLEFCKHMMRLGLLPSSSSINVMFEKLCGNGKTKLADEMF 604
            GRL+++ ++   M     +PS +    +      NG    A +++
Sbjct: 490  GRLKDAEKYLGLMKSRSFIPSPNVYERLISGHLQNGNETRARQLY 534


>ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Solanum lycopersicum]
          Length = 552

 Score =  482 bits (1240), Expect = e-133
 Identities = 252/495 (50%), Positives = 343/495 (69%), Gaps = 2/495 (0%)
 Frame = -3

Query: 1818 HKLADSIHDPLEKLEGITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDS 1639
            H L    + P      ITS+  SL+RGE+W+ L++KF S  FT+ +V  +LLQL++P D+
Sbjct: 34   HSLQALQNSPNSNNSIITSMCNSLRRGENWQVLTKKFQSFHFTDPIVQEVLLQLKEPHDA 93

Query: 1638 RKALKFFHWTAKEMKFDHGISSYCLIIHILVKGGLIKDAKAMLESILAKDS-FDGNSQLF 1462
            + AL FFHW+AK     HG+  YC+IIHIL K  L++ A A++ES+L K+S  DG+  +F
Sbjct: 94   KNALSFFHWSAKSFNSRHGVFIYCIIIHILAKSKLVRHANALIESVLRKESGVDGH--VF 151

Query: 1461 VVLDSLMESCRAVDSVPLVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLH 1282
             VL  L+ S +  DS   VFDLF+Q CAKLR++D  LD  +LL   GF+LS+I++NTLLH
Sbjct: 152  SVLACLIGSYKLADSCSFVFDLFVQCCAKLRMIDKGLDVCKLLDGNGFMLSLISYNTLLH 211

Query: 1281 VLQKSGNVDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSV 1102
            V+QKS    +VWG+YE MI++R  PNE T + MIS LCK+G+L+RFL ++++ HGKR   
Sbjct: 212  VVQKSEKTSMVWGIYEYMIEKRIYPNEMTTRIMISALCKQGRLQRFLDVLEKSHGKRCR- 270

Query: 1101 PQLIVNTCLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEI 922
            P ++VNTCL+Y MIE+ RI+DGL L++ MLQKNMILDTIS SL+V AKVK+ DL++A  +
Sbjct: 271  PGVVVNTCLIYGMIEEGRIEDGLRLMRRMLQKNMILDTISCSLIVLAKVKMRDLESAWGV 330

Query: 921  YEEMLKRGFEENSFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSL 742
            Y+EML+RGFE N+ V   F+GAYC+E RIDEAI L++E+E L  KP +E FNHLIK CS 
Sbjct: 331  YDEMLRRGFEGNALVYDSFIGAYCEEKRIDEAIKLMDEMECLNMKPFSETFNHLIKVCSE 390

Query: 741  NGRLEESLEFCKHMMRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETT 562
             GRLEESL+ C  M+  GLLPS  S N +  KL  NG  K A+++ T L++KGF PD++ 
Sbjct: 391  VGRLEESLKICDKMIGNGLLPSCLSFNALVAKLSENGSAKCANKLLTTLMDKGFIPDQSI 450

Query: 561  YSHLVSGYCRDDDKEGLVKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIME 385
            YS+L+ GY    D EG +KL  EM+YR               LC+ GRLKEA+++  +M 
Sbjct: 451  YSYLIVGYANVGDVEGALKLYYEMQYRSISPNTSIFDYLIIALCECGRLKEADEFLSLMI 510

Query: 384  ARSLVPSPNVYEALI 340
             +SL PS +VY+ LI
Sbjct: 511  GQSLRPSIHVYKKLI 525


>ref|XP_002305195.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222848159|gb|EEE85706.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 556

 Score =  472 bits (1215), Expect = e-130
 Identities = 250/497 (50%), Positives = 349/497 (70%), Gaps = 3/497 (0%)
 Frame = -3

Query: 1821 YHKLADSIHD--PLEKLEGITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDP 1648
            + ++A  +HD    E    ++SI  SL+RG +W TL++KF SL+  N LV N+LL+L++P
Sbjct: 28   WFEVARFLHDGTKTESDTVVSSICDSLRRGYNWDTLNRKFESLQLNNLLVKNVLLELKEP 87

Query: 1647 IDSRKALKFFHWTAKEMKFDHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQ 1468
             D+++AL FFHW+A+   F HG+ SYCL+IHIL++  LI DA+A+LES+L K    G+  
Sbjct: 88   TDAKRALGFFHWSARR-NFVHGVQSYCLMIHILIQARLIMDAQALLESLLKKSV--GDPT 144

Query: 1467 LFVVLDSLMESCRAVDSVPLVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTL 1288
             F+VLDSL+ S + + S PLVFDL +Q  AK R+ +   D    L +  F LS+I+FNTL
Sbjct: 145  KFLVLDSLLSSYKIIISSPLVFDLLVQAYAKQRMFEIGFDVCCRLEEHRFTLSLISFNTL 204

Query: 1287 LHVLQKSGNVDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRS 1108
            +HV+QKS    L W +YE M+ RR  PNEAT+++MIS LCKEGKL+  ++++D++HGKR 
Sbjct: 205  IHVVQKSDKSPLAWKIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRC 264

Query: 1107 SVPQLIVNTCLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAK 928
            S P +IVNTCLV+ ++E+ R++ GL LLK ML+KNMILDT++YSL+V+AKVKLG+L++A 
Sbjct: 265  S-PVVIVNTCLVFRILEEGRVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAM 323

Query: 927  EIYEEMLKRGFEENSFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGC 748
            ++YEEMLKRGF  NSFV + F+GAYC E RI+EA  LL+E+E +G KP  + FN L++GC
Sbjct: 324  QVYEEMLKRGFNANSFVYTSFIGAYCKEERIEEANQLLQEMENMGLKPYGDTFNFLLEGC 383

Query: 747  SLNGRLEESLEFCKHMMRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDE 568
            +  GR+EE+L +CK MM +G +PS S+ N M  KLC       A+EM T LL++GF  DE
Sbjct: 384  AKAGRVEETLSYCKKMMEMGHVPSLSAFNEMVGKLCRIEDVTRANEMLTNLLDEGFLADE 443

Query: 567  TTYSHLVSGYCRDDDKEGLVKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEI 391
             TYS+L+SGY +++  + ++KL  EMEYR               LC  G+L+EAEKY  I
Sbjct: 444  ITYSNLISGYAKNNQIQEMLKLYYEMEYRSLSPGLMGFTSLIKGLCNCGKLEEAEKYLRI 503

Query: 390  MEARSLVPSPNVYEALI 340
            M  RSL P  +VYEALI
Sbjct: 504  MIGRSLNPREDVYEALI 520



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 72/355 (20%), Positives = 149/355 (41%), Gaps = 14/355 (3%)
 Frame = -3

Query: 1605 KEMKFDHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRA 1426
            +E +F   + S+  +IH++ K      A  + E +L + ++   + +  ++ +L +  + 
Sbjct: 190  EEHRFTLSLISFNTLIHVVQKSDKSPLAWKIYEHMLHRRTYPNEATIESMISALCKEGKL 249

Query: 1425 VDSVPLVFDL---------FMQTCAKLRI-----VDGILDAFELLFDKGFVLSVITFNTL 1288
               V ++  +          + TC   RI     V+  L   +++  K  +L  + ++ +
Sbjct: 250  QTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLRKNMILDTVAYSLI 309

Query: 1287 LHVLQKSGNVDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRS 1108
            ++   K GN++    VYE M+KR    N     + I   CKE ++E    ++  M     
Sbjct: 310  VYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEERIEEANQLLQEMENMGL 369

Query: 1107 SVPQLIVNTCLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAK 928
              P       L+    +  R+++ L   K M++   +    +++ +V    ++ D+  A 
Sbjct: 370  K-PYGDTFNFLLEGCAKAGRVEETLSYCKKMMEMGHVPSLSAFNEMVGKLCRIEDVTRAN 428

Query: 927  EIYEEMLKRGFEENSFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGC 748
            E+   +L  GF  +    S  +  Y    +I E + L  E+E     P    F  LIKG 
Sbjct: 429  EMLTNLLDEGFLADEITYSNLISGYAKNNQIQEMLKLYYEMEYRSLSPGLMGFTSLIKGL 488

Query: 747  SLNGRLEESLEFCKHMMRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKG 583
               G+LEE+ ++ + M+   L P       + +     G  + A  ++  ++ KG
Sbjct: 489  CNCGKLEEAEKYLRIMIGRSLNPREDVYEALIKVYFEKGDKRRALNLYNEMVSKG 543



 Score = 77.4 bits (189), Expect = 3e-11
 Identities = 61/288 (21%), Positives = 122/288 (42%), Gaps = 3/288 (1%)
 Frame = -3

Query: 1191 KTMISTLCKE--GKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKDRIQDGLFLLKH 1018
            + ++ +L K+  G   +FL +   +   +  +   +V   LV    ++   + G  +   
Sbjct: 129  QALLESLLKKSVGDPTKFLVLDSLLSSYKIIISSPLVFDLLVQAYAKQRMFEIGFDVCCR 188

Query: 1017 MLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCSLFVGAYCDEGR 838
            + +    L  IS++ ++    K      A +IYE ML R    N       + A C EG+
Sbjct: 189  LEEHRFTLSLISFNTLIHVVQKSDKSPLAWKIYEHMLHRRTYPNEATIESMISALCKEGK 248

Query: 837  IDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRLGLLPSSSSINV 658
            +   + +L++I      P       L+      GR+E  L   K M+R  ++  + + ++
Sbjct: 249  LQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLRKNMILDTVAYSL 308

Query: 657  MFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEGLVKLLCEMEYRX 478
            +       G    A +++  +L++GF+ +   Y+  +  YC+++  E   +LL EME   
Sbjct: 309  IVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEERIEEANQLLQEMENMG 368

Query: 477  XXXXXXXXXXXXXLC-KSGRLKEAEKYKEIMEARSLVPSPNVYEALIG 337
                          C K+GR++E   Y + M     VPS + +  ++G
Sbjct: 369  LKPYGDTFNFLLEGCAKAGRVEETLSYCKKMMEMGHVPSLSAFNEMVG 416


>ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 553

 Score =  465 bits (1197), Expect = e-128
 Identities = 228/479 (47%), Positives = 343/479 (71%), Gaps = 1/479 (0%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            +T+I    +RG +W TLS++F S+   ++LV N+LL+L++P+D+++AL FFHW+A    +
Sbjct: 40   VTAICDCFRRGWNWDTLSKQFNSIHLNDSLVENVLLELKEPVDAKRALGFFHWSAHHKSY 99

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
             H + SY + IHILV+  L+ DA+A++ES+L K    G+   F V+DSL+++    DS+P
Sbjct: 100  QHNLCSYSVTIHILVQARLLVDARALIESVLEKHI--GDDSRFSVVDSLLDTYNVADSIP 157

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVWGVYEL 1231
            LVFDL +QT +K+R+ +   D    L  +GF LS+I+FNTL+HV+ KS   DLVW +Y+ 
Sbjct: 158  LVFDLLVQTYSKMRLFEVAFDVCCYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQH 217

Query: 1230 MIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKD 1051
            M++  + PNEAT++T+IS LCK G+L+ ++ ++DR+HGKR S P +IVNT L+  +I+++
Sbjct: 218  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCS-PMVIVNTSLILRIIQEE 276

Query: 1050 RIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCS 871
            RI++G+ LLK ML+KNMI DTI+YSL+V+AKVK+G+L++A  +YEEMLKRGF  NSFV +
Sbjct: 277  RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMGNLESALVVYEEMLKRGFSANSFVYT 336

Query: 870  LFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRL 691
             F+GAYC+ G+I+EA  L++E+E  G KP +E FN LI+GC+   R+EESL +C+ MM  
Sbjct: 337  TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 396

Query: 690  GLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEGL 511
             LLPS S+ N M  +LC  G  K A+ M T+ L+KGFSP+E TYSHL+ GY ++ + + +
Sbjct: 397  KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 456

Query: 510  VKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEALIG 337
            +KL  EMEY+               LC+ G+L+EA+KY +IM++ SLVP  ++YE+L+G
Sbjct: 457  LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 515


>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Vitis vinifera]
          Length = 547

 Score =  461 bits (1186), Expect = e-127
 Identities = 238/478 (49%), Positives = 333/478 (69%), Gaps = 1/478 (0%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            +  +  SL+RG +W  L+Q+FGSL+ T + V  +LL+L+ PID+++AL FFHW+A+    
Sbjct: 41   VNMLCDSLRRGLNWDALNQRFGSLELTESFVGRVLLELKKPIDAKQALGFFHWSAQCKNL 100

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
            +HG++SYC+ IHILV   L+ DA+++LES L K++       F+V+DSL+ S     S P
Sbjct: 101  EHGLASYCITIHILVGAQLLMDAQSLLESTLKKNA----GSRFLVVDSLLSSYNITGSNP 156

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVWGVYEL 1231
             VFDL +Q+ +KLR+ +   D    L + GF LS+I+FNTLLHV+QKS N  LVW +YE 
Sbjct: 157  RVFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNTLLHVVQKSDNYPLVWKIYEH 216

Query: 1230 MIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKD 1051
            MI+ RK PNE +V  MIS LCKEG L++F+ ++DR+HGKR S P +IVNTC+++ M+E+ 
Sbjct: 217  MIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCS-PIVIVNTCMIFRMLEEG 275

Query: 1050 RIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCS 871
            R++ G+ +LK +LQKNMILDTISYSL+ +AKVK G LD+A E+YEEML RGF  N+FV +
Sbjct: 276  RVEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYT 335

Query: 870  LFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRL 691
            LF+G++C EGRI+EA  L++++E  G  P +E FN LI GCS  GRLEE L  C+ MM+ 
Sbjct: 336  LFIGSHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQR 395

Query: 690  GLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEGL 511
            GL+PS  + N+M  KLC +G  K ADEM T+LL+KGF PDE TYS+L++ Y +  + + +
Sbjct: 396  GLVPSCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQV 455

Query: 510  VKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEALI 340
            +KL  EMEYR               LC+  +L++AEKY  IM+ RS+  S  VYE LI
Sbjct: 456  LKLYYEMEYRSLSPGLLAFESLIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLI 513



 Score = 84.3 bits (207), Expect = 2e-13
 Identities = 59/266 (22%), Positives = 116/266 (43%)
 Frame = -3

Query: 1371 RIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVWGVYELMIKRRKCPNEATV 1192
            R+  G+L   + L  K  +L  I+++ + +   K G +D  W VYE M+ R   PN    
Sbjct: 276  RVEQGML-ILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVY 334

Query: 1191 KTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKDRIQDGLFLLKHML 1012
               I + C EG++E    ++  M      +P       L+    +  R+++GL L + M+
Sbjct: 335  TLFIGSHCVEGRIEEANELMQDMENA-GLMPYDETFNLLIAGCSKAGRLEEGLRLCERMM 393

Query: 1011 QKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCSLFVGAYCDEGRID 832
            Q+ ++    +++L+     + G +  A E+   +L +GF  +    S  + +Y   G I 
Sbjct: 394  QRGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQ 453

Query: 831  EAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRLGLLPSSSSINVMF 652
            + + L  E+E     P   AF  LI+      +LE++ ++ + M    +  S+     + 
Sbjct: 454  QVLKLYYEMEYRSLSPGLLAFESLIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLI 513

Query: 651  EKLCGNGKTKLADEMFTMLLEKGFSP 574
                  G    A ++   ++ +G  P
Sbjct: 514  SSYFEKGDELRASQLHNEMVSRGLKP 539



 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 1/221 (0%)
 Frame = -3

Query: 996 LDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCSLFVGAYCDEGRIDEAIGL 817
           L  IS++ ++    K  +     +IYE M++     N    S+ + A C EG + + + +
Sbjct: 189 LSLISFNTLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDM 248

Query: 816 LEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRLGLLPSSSSINVMFEKLCG 637
           L+ I      P       +I      GR+E+ +   K +++  ++  + S +++      
Sbjct: 249 LDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVK 308

Query: 636 NGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEGLVKLLCEMEYRXXXXXXXX 457
            G    A E++  +L +GF P+   Y+  +  +C +   E   +L+ +ME          
Sbjct: 309 YGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDET 368

Query: 456 XXXXXXLC-KSGRLKEAEKYKEIMEARSLVPSPNVYEALIG 337
                  C K+GRL+E  +  E M  R LVPS   +  + G
Sbjct: 369 FNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAG 409


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  459 bits (1181), Expect = e-126
 Identities = 237/478 (49%), Positives = 332/478 (69%), Gaps = 1/478 (0%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            +  +  SL+RG +W  L+Q+FGSL+ T + V  +LL+L+ PID+++AL FFHW+A+    
Sbjct: 41   VNMLCDSLRRGLNWDALNQRFGSLELTESFVGRVLLELKKPIDAKQALGFFHWSAQCKNL 100

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
            +HG++SYC+ IHILV   L+ DA+++LES L K++       F+V+DSL+ S     S P
Sbjct: 101  EHGVASYCITIHILVGAHLLMDAQSLLESTLKKNA----GSRFLVVDSLLSSYNITGSNP 156

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVWGVYEL 1231
             VFDL +Q+ +KLR+ +   D    L + GF LS+I+FN LLHV+QKS N  LVW +YE 
Sbjct: 157  RVFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNXLLHVVQKSDNYPLVWKIYEH 216

Query: 1230 MIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKD 1051
            MI+ RK PNE +V  MIS LCKEG L++F+ ++DR+HGKR S P +IVNTC+++ M+E+ 
Sbjct: 217  MIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCS-PIVIVNTCMIFRMLEEG 275

Query: 1050 RIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCS 871
            R++ G+ +LK +LQKNMILDTISYSL+ +AKVK G LD+A E+YEEML RGF  N+FV +
Sbjct: 276  RVEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYT 335

Query: 870  LFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRL 691
            LF+G++C EGRI+EA  L++++E  G  P +E FN LI GCS  GRLEE L  C+ MM+ 
Sbjct: 336  LFIGSHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQR 395

Query: 690  GLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEGL 511
            GL+PS  + N+M  KLC +G  K ADEM T+LL+KGF PDE TYS+L++ Y +  + + +
Sbjct: 396  GLVPSCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQV 455

Query: 510  VKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEALI 340
            +KL  EMEYR               LC+  +L++AEKY  IM+ RS+  S  VYE LI
Sbjct: 456  LKLYYEMEYRSLSPGLLVFESIIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLI 513



 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 1/221 (0%)
 Frame = -3

Query: 996 LDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCSLFVGAYCDEGRIDEAIGL 817
           L  IS++ ++    K  +     +IYE M++     N    S+ + A C EG + + + +
Sbjct: 189 LSLISFNXLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDM 248

Query: 816 LEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRLGLLPSSSSINVMFEKLCG 637
           L+ I      P       +I      GR+E+ +   K +++  ++  + S +++      
Sbjct: 249 LDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVK 308

Query: 636 NGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEGLVKLLCEMEYRXXXXXXXX 457
            G    A E++  +L +GF P+   Y+  +  +C +   E   +L+ +ME          
Sbjct: 309 YGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDET 368

Query: 456 XXXXXXLC-KSGRLKEAEKYKEIMEARSLVPSPNVYEALIG 337
                  C K+GRL+E  +  E M  R LVPS   +  + G
Sbjct: 369 FNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAG 409


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  457 bits (1177), Expect = e-126
 Identities = 236/481 (49%), Positives = 340/481 (70%), Gaps = 2/481 (0%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            + +I  SL+RG +W +LS KF  ++  + LV  +LL+L++PID+++AL FFHW+A+   F
Sbjct: 47   VYAICDSLRRGHNWVSLSGKFQYVELNHLLVEKVLLELKEPIDAKRALGFFHWSAQRKNF 106

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
             HG+ SYCL+++ILV+  L+ DA+A+LESIL K+  D +   F+++DSL++S + + S P
Sbjct: 107  VHGVWSYCLMVNILVRAQLLNDAQALLESILKKNVEDSSE--FLIVDSLLDSYKIIVSSP 164

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVWGVYEL 1231
            LVF+L +Q  AKLR+ +        L + GF LS+++FNTL+HV+QKS    LVW +YE 
Sbjct: 165  LVFNLLVQAYAKLRLFEIGFKICFYLEEHGFFLSLLSFNTLIHVVQKSDQYPLVWKIYEH 224

Query: 1230 MIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKD 1051
            MI +R  PNEAT++TMI+ LCKEGKL+ F+ I+DR+HGKR   P +I+N C+V+ ++++ 
Sbjct: 225  MIHKRIYPNEATIRTMINALCKEGKLQMFVDILDRIHGKRCR-PLVIINACMVFRILQEG 283

Query: 1050 RIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCS 871
            R+  G+ +LK MLQKNMILDT++YSL+VFAKV+LG+LD+A E+YE MLKRGF  NSFV +
Sbjct: 284  RVDVGIGILKGMLQKNMILDTVAYSLIVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHT 343

Query: 870  LFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRL 691
            + +GAYC+ G+I++A  L  E+  +G +P +E FN LI+GC+  GR+EE L + + M+  
Sbjct: 344  VLIGAYCNGGKIEKANQLFGEMGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIER 403

Query: 690  GLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEGL 511
            GL+PS  + N M  KLC  G+   A+   T LL+KGFSPDETTYS+L++GY RD+  + +
Sbjct: 404  GLVPSLLAFNKMIAKLCETGEVNQANTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEV 463

Query: 510  VKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEALI-G 337
            +KL  EMEYR               LC  G+L++AEKY  IM+ RSL PS  VYEALI G
Sbjct: 464  LKLYYEMEYRPLSPGLLVFTPLIRSLCHCGKLEQAEKYLRIMKGRSLNPSQQVYEALIAG 523

Query: 336  H 334
            H
Sbjct: 524  H 524



 Score = 62.4 bits (150), Expect = 9e-07
 Identities = 57/255 (22%), Positives = 114/255 (44%), Gaps = 15/255 (5%)
 Frame = -3

Query: 1575 SYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVL-------------DSLMES 1435
            +Y LI+   V+ G +  A  + E++L K  F+ NS +  VL             + L   
Sbjct: 306  AYSLIVFAKVRLGNLDSALEVYEAML-KRGFNANSFVHTVLIGAYCNGGKIEKANQLFGE 364

Query: 1434 CRAVDSVPL--VFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGN 1261
               +   P    F+  ++ CAK   V+  L  FE + ++G V S++ FN ++  L ++G 
Sbjct: 365  MGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPSLLAFNKMIAKLCETGE 424

Query: 1260 VDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNT 1081
            V+        ++ +   P+E T   +++   ++ +++  L +   M  +  S P L+V T
Sbjct: 425  VNQANTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLYYEMEYRPLS-PGLLVFT 483

Query: 1080 CLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKR 901
             L+  +    +++     L+ M  +++      Y  ++   ++  D   A ++Y EM+ +
Sbjct: 484  PLIRSLCHCGKLEQAEKYLRIMKGRSLNPSQQVYEALIAGHLEKSDTARALQLYNEMISK 543

Query: 900  GFEENSFVCSLFVGA 856
            GF      CS   GA
Sbjct: 544  GFTP---CCSYNFGA 555


>gb|EPS59968.1| hypothetical protein M569_14837 [Genlisea aurea]
          Length = 451

 Score =  454 bits (1168), Expect = e-125
 Identities = 228/435 (52%), Positives = 316/435 (72%), Gaps = 7/435 (1%)
 Frame = -3

Query: 1764 SIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKFDH 1585
            ++I +L R  SWK LS+ F S++F+  L  +++LQL++P++SRKAL FFHW AKE+ F+H
Sbjct: 10   AVIEALHRTTSWKFLSENFSSVEFSEPLFRSVMLQLKEPMNSRKALNFFHWAAKELHFEH 69

Query: 1584 GISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNS-----QLFVVLDSLMESCRAVD 1420
            G+SSYC++IHIL K  +IKDAKA+LESIL K +  G          +VL+ L+    A D
Sbjct: 70   GVSSYCIMIHILAKARMIKDAKALLESILNKKTSSGGGGGGEPTEVIVLNELINGFTAAD 129

Query: 1419 SVPLVFDLFMQTCAKLRIVDGI-LDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVWG 1243
            S+P VFDLF+QTCAKLR++D + +   +LL D+GF LSVI+FNT+LHV++KSG  D VW 
Sbjct: 130  SIPFVFDLFIQTCAKLRMLDYVSVSCKQLLDDRGFSLSVISFNTVLHVMEKSGRFDSVWL 189

Query: 1242 VYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEM 1063
            VYE MI+ R CPNEATV+TM++ LCK GKLE FL +VD+M+G+R S P++I N  L++ M
Sbjct: 190  VYEQMIRSRTCPNEATVRTMVNALCKAGKLESFLRLVDKMNGRRCSSPRVIANAYLIHGM 249

Query: 1062 IEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENS 883
            I  DRI++GL LLK MLQKN + DTIS  LVVFAKVK G+  AA+EIY +++ RGF EN+
Sbjct: 250  IGDDRIREGLSLLKWMLQKNFVFDTISCCLVVFAKVKTGEFAAAREIYRQLIDRGFAENA 309

Query: 882  FVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKH 703
            F CSLFV    + GRI +A+ +L E+E+ G  P++EA + L+ GC+ +GRL++ L  C+ 
Sbjct: 310  FACSLFVEFCSETGRIRDAVAVLAEMEKAGLTPTDEAMSRLVWGCASSGRLDDGLLHCRK 369

Query: 702  MM-RLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDD 526
            M   + LLPS +++N MF KL   G+T  ADEM T+LLEKGF PD  TYSHLVSGY ++ 
Sbjct: 370  MAEEMRLLPSRAAVNEMFRKLGEAGRTGEADEMLTVLLEKGFEPDRNTYSHLVSGYGKEG 429

Query: 525  DKEGLVKLLCEMEYR 481
              + ++++  EM++R
Sbjct: 430  ATDRVIRIQYEMKHR 444


>ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cucumis sativus]
          Length = 517

 Score =  449 bits (1156), Expect = e-123
 Identities = 229/478 (47%), Positives = 331/478 (69%), Gaps = 1/478 (0%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            + SI  SL R +SW TLS+KF  L+  + LV  +LL+ + P+D+++AL FFHW+AK   F
Sbjct: 20   VNSICDSLTRRQSWDTLSRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWSAKRKNF 79

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
            +HG  S+ ++IHILVK  L+ DA+A+LESIL K+  +GNS  + V+DSLM+S     S P
Sbjct: 80   NHGPQSFGIMIHILVKARLVLDARALLESILKKN--EGNSFDYSVVDSLMDSYEVTGSSP 137

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVWGVYEL 1231
             VFDL +QTCAKLR++D  L     L ++GF LS+I+FNTL+HV++KS     VW +YE 
Sbjct: 138  FVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENLKVWKIYEQ 197

Query: 1230 MIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKD 1051
            MI++R  PN  TV+ MI++LCKEGKL+    +++R+HG R S   LIVN CL+Y ++E+ 
Sbjct: 198  MIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSA-SLIVNACLIYRILEEG 256

Query: 1050 RIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCS 871
            R++DG+ LLK MLQKNM+LD I+YSL+V+AKVK G + +  E++EEM +RGF+ NSF+ +
Sbjct: 257  RVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYT 316

Query: 870  LFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRL 691
            LF+G +C  G+++EA  L++E+E +G KP  E FN LI+GC+++G  EE L  C+ M+  
Sbjct: 317  LFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLER 376

Query: 690  GLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEGL 511
            G LPS S  NV  +K+C  G  K A+ + T+LL+KGF PDETTY++L+ GY +  + + +
Sbjct: 377  GFLPSCSVFNVAIDKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEI 436

Query: 510  VKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEALI 340
            +KL  EM  R               LC+SGRL+EAEKY +I++  SL P  ++Y+ALI
Sbjct: 437  LKLYYEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALI 494



 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 53/241 (21%), Positives = 104/241 (43%), Gaps = 15/241 (6%)
 Frame = -3

Query: 1575 SYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVL-------------DSLMES 1435
            +Y LI++  VK G I     + E  +++  F  NS ++ +                LM+ 
Sbjct: 279  AYSLIVYAKVKTGSITSTWEVFEE-MSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQE 337

Query: 1434 CR--AVDSVPLVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGN 1261
                 +   P  F+L ++ CA     + IL   E + ++GF+ S   FN  +  + + G+
Sbjct: 338  MENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAIDKICEKGD 397

Query: 1260 VDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNT 1081
            V     +  +++ +   P+E T   +I    K G+++  L +   M G R   P + V  
Sbjct: 398  VKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEM-GARLLSPGVSVFF 456

Query: 1080 CLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKR 901
             L+  + +  R+++    LK +   ++      Y  ++   +K G+   A E+Y EM+  
Sbjct: 457  ALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALILLYLKKGNRAKALELYNEMMFD 516

Query: 900  G 898
            G
Sbjct: 517  G 517


>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cucumis sativus]
          Length = 539

 Score =  448 bits (1153), Expect = e-123
 Identities = 229/478 (47%), Positives = 330/478 (69%), Gaps = 1/478 (0%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            + SI  SL R +SW TLS+KF  L+  + LV  +LL+ + P+D+++AL FFHW+AK   F
Sbjct: 42   VNSICDSLTRRQSWDTLSRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWSAKRKNF 101

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
            +HG  S+ ++IHILVK  L+ DA+A+LESIL K+  +GNS  + V+DSLM+S     S P
Sbjct: 102  NHGPQSFGIMIHILVKARLVLDARALLESILKKN--EGNSFDYSVVDSLMDSYEVTGSSP 159

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVWGVYEL 1231
             VFDL +QTCAKLR++D  L     L ++GF LS+I+FNTL+HV++KS     VW +YE 
Sbjct: 160  FVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDQNLKVWKIYEQ 219

Query: 1230 MIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKD 1051
            MI++R  PN  TV+ MI++LCKEGKL+    +++R+HG R S   LIVN CL+Y ++E+ 
Sbjct: 220  MIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSA-SLIVNACLIYRILEEG 278

Query: 1050 RIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCS 871
            R++DG+ LLK MLQKNM+LD I+YSL+V+AKVK G + +  E++EEM +RGF+ NSF+ +
Sbjct: 279  RVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYT 338

Query: 870  LFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRL 691
            LF+G +C  G+++EA  L++E+E +G KP  E FN LI+GC+++G  EE L  C+ M+  
Sbjct: 339  LFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLER 398

Query: 690  GLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEGL 511
            G LPS S  NV   K+C  G  K A+ + T+LL+KGF PDETTY++L+ GY +  + + +
Sbjct: 399  GFLPSCSVFNVAIAKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEI 458

Query: 510  VKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEALI 340
            +KL  EM  R               LC+SGRL+EAEKY +I++  SL P  ++Y+ALI
Sbjct: 459  LKLYYEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALI 516



 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 53/241 (21%), Positives = 104/241 (43%), Gaps = 15/241 (6%)
 Frame = -3

Query: 1575 SYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVL-------------DSLMES 1435
            +Y LI++  VK G I     + E  +++  F  NS ++ +                LM+ 
Sbjct: 301  AYSLIVYAKVKTGSITSTWEVFEE-MSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQE 359

Query: 1434 CR--AVDSVPLVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGN 1261
                 +   P  F+L ++ CA     + IL   E + ++GF+ S   FN  +  + + G+
Sbjct: 360  MENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAIAKICEKGD 419

Query: 1260 VDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNT 1081
            V     +  +++ +   P+E T   +I    K G+++  L +   M G R   P + V  
Sbjct: 420  VKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEM-GARLLSPGVSVFF 478

Query: 1080 CLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKR 901
             L+  + +  R+++    LK +   ++      Y  ++   +K G+   A E+Y EM+  
Sbjct: 479  ALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALILFYLKKGNRAKALELYNEMMFD 538

Query: 900  G 898
            G
Sbjct: 539  G 539


>ref|XP_007214531.1| hypothetical protein PRUPE_ppa014874mg, partial [Prunus persica]
            gi|462410396|gb|EMJ15730.1| hypothetical protein
            PRUPE_ppa014874mg, partial [Prunus persica]
          Length = 499

 Score =  441 bits (1135), Expect = e-121
 Identities = 226/467 (48%), Positives = 320/467 (68%), Gaps = 1/467 (0%)
 Frame = -3

Query: 1764 SIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKFDH 1585
            +I  S +   +W TL+ KF S+K    LV ++LL+L++PID+++AL FFHW A    F+H
Sbjct: 36   AIRDSFRSSWNWDTLTTKFESVKLDGGLVDSVLLELKEPIDAKRALGFFHWAAHRKSFEH 95

Query: 1584 GISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVPLV 1405
            G+ SY + IHIL +  L+ DA+A+LES+L K + +G+   F V+DSL+ S     S P V
Sbjct: 96   GVWSYSITIHILARARLLMDARALLESVLKKTAENGSK--FSVVDSLLSSYEVTASNPFV 153

Query: 1404 FDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVWGVYELMI 1225
            FDL +Q  AKLR+ +   D    L + G  LS+IT+NTLLHV+QKS    LVW +YE M+
Sbjct: 154  FDLLLQAYAKLRMFETGFDVCCYLGEHGLPLSLITYNTLLHVVQKSDQTALVWKIYEHMV 213

Query: 1224 KRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKDRI 1045
             +R  PNE T+K +I  LCKEGKL++ + ++DR+HGKR S P +IVNT LV+ ++E  R+
Sbjct: 214  GKRNYPNEETIKILIDALCKEGKLKKCVDMLDRIHGKRCS-PSVIVNTSLVFSILEGGRV 272

Query: 1044 QDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCSLF 865
            ++GL LL+ MLQKNM+LDTI+YSL+V+AKVKLGD+ +A E+YEEMLKRGF  NSFV +LF
Sbjct: 273  EEGLMLLRRMLQKNMVLDTIAYSLIVYAKVKLGDVCSAWEVYEEMLKRGFRANSFVYTLF 332

Query: 864  VGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRLGL 685
            +GA+C+EGR++EA G++ E+E +  KP +E++N LI+GC+  GR+E SL + K M+  G 
Sbjct: 333  MGAHCEEGRMEEAQGMMNEMENMDLKPFDESYNLLIEGCAKAGRVEASLSYLKKMVESGF 392

Query: 684  LPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEGLVK 505
            +P  S+ N M  KLC  G  + A+ MFT+LL+KGF PD TTY HL+ GY R  + + +VK
Sbjct: 393  IPCRSAFNEMVGKLCETGDAEQANTMFTILLDKGFLPDSTTYGHLIDGYGRKGEIQEVVK 452

Query: 504  LLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVP 367
            L  EME R                C+ G+++EAE+Y  IM+ RS+ P
Sbjct: 453  LYYEMESRSLSPGALVFTSVIKSFCQCGKVEEAERYFGIMKDRSIAP 499


>ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 530

 Score =  433 bits (1113), Expect = e-118
 Identities = 228/507 (44%), Positives = 329/507 (64%), Gaps = 1/507 (0%)
 Frame = -3

Query: 1851 NLSSLMPEDEYHKLADSIHDPLEKLEGITSIIGSLQRGESWKTLSQKFGSLKFTNTLVAN 1672
            +L+SL P  +       IH        + +I  S + G SW  L+ KF  +K    LV N
Sbjct: 11   SLNSLKPNTQL------IHTNSTPNNVVRAICDSFKSGWSWDALTSKFACVKLDAKLVEN 64

Query: 1671 ILLQLRDPIDSRKALKFFHWTAKEMKFDHGISSYCLIIHILVKGGLIKDAKAMLESILAK 1492
            +LL+L+DP D+++AL FFHW +K   FDHG+ SY + IHILV+  +  DA+A++ES+L K
Sbjct: 65   VLLELKDPNDAKRALGFFHWVSKRKDFDHGVWSYSITIHILVRAKMAMDARALMESVLKK 124

Query: 1491 DSFDGNSQLFVVLDSLMESCRAVDSVPLVFDLFMQTCAKLRIVDGILDAFELLFDKGFVL 1312
            +   G+S  F V+DSL+ S     S P VFDL +QT AK+R+ +   D    L ++G  L
Sbjct: 125  NV--GDSLKFSVVDSLLSSYEVTASNPFVFDLLVQTYAKMRMFETGFDVCCYLRERGLPL 182

Query: 1311 SVITFNTLLHVLQKSGNVDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIV 1132
            S+I++NTLL V+++S    LVW +YE M+ RR  PNE TV+ +I  LCKEG+L ++  ++
Sbjct: 183  SLISYNTLLRVVERSERNALVWKIYEHMVGRRSYPNEETVRILIDALCKEGELRKYADML 242

Query: 1131 DRMHGKRSSVPQLIVNTCLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVK 952
            DR+HGKR S P +IVNT LV+ ++E+ R+++G+ LLK MLQKNM+LDTI+YSL+V+AKVK
Sbjct: 243  DRIHGKRCS-PSVIVNTSLVFRILEEGRVEEGMVLLKRMLQKNMVLDTIAYSLIVYAKVK 301

Query: 951  LGDLDAAKEIYEEMLKRGFEENSFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEA 772
            L DL +A+++YEEMLKRGF  NSFV +LF+ A+C  GRIDEA  ++ E+  +  KP +E+
Sbjct: 302  LEDLGSAQQVYEEMLKRGFRANSFVYTLFIEAHCKAGRIDEAQSMMNEMGNMDLKPYDES 361

Query: 771  FNHLIKGCSLNGRLEESLEFCKHMMRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLL 592
            +N LI+GC+  GR+EES+ + K MM +  +PS  + N M  KLC  G    A+ M T+LL
Sbjct: 362  YNFLIEGCAKAGRVEESVNYMKQMMEIRFIPSLGAFNEMVGKLCEIGDADQANVMLTILL 421

Query: 591  EKGFSPDETTYSHLVSGYCRDDDKEGLVKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLK 415
            +KGFSP+E TYS L+ GY R    + ++KL  EME R                C+ G+ +
Sbjct: 422  DKGFSPNEITYSLLIDGYARKGKSDEVLKLFYEMESRSLSPGMLVFTSLIKSFCQCGKSE 481

Query: 414  EAEKYKEIMEARSLVPSPNVYEALIGH 334
            EA+KY  IM+ RS+ PS + YE  + +
Sbjct: 482  EAKKYFRIMKDRSIAPSISTYEIFLAN 508



 Score = 88.2 bits (217), Expect = 2e-14
 Identities = 65/273 (23%), Positives = 120/273 (43%)
 Frame = -3

Query: 1431 RAVDSVPLVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDL 1252
            R   SV +   L  +   + R+ +G++   + +  K  VL  I ++ +++   K  ++  
Sbjct: 249  RCSPSVIVNTSLVFRILEEGRVEEGMV-LLKRMLQKNMVLDTIAYSLIVYAKVKLEDLGS 307

Query: 1251 VWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLV 1072
               VYE M+KR    N       I   CK G+++   S+++ M G     P       L+
Sbjct: 308  AQQVYEEMLKRGFRANSFVYTLFIEAHCKAGRIDEAQSMMNEM-GNMDLKPYDESYNFLI 366

Query: 1071 YEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFE 892
                +  R+++ +  +K M++   I    +++ +V    ++GD D A  +   +L +GF 
Sbjct: 367  EGCAKAGRVEESVNYMKQMMEIRFIPSLGAFNEMVGKLCEIGDADQANVMLTILLDKGFS 426

Query: 891  ENSFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEF 712
             N    SL +  Y  +G+ DE + L  E+E     P    F  LIK     G+ EE+ ++
Sbjct: 427  PNEITYSLLIDGYARKGKSDEVLKLFYEMESRSLSPGMLVFTSLIKSFCQCGKSEEAKKY 486

Query: 711  CKHMMRLGLLPSSSSINVMFEKLCGNGKTKLAD 613
             + M    + PS S+  +        G T+ AD
Sbjct: 487  FRIMKDRSIAPSISTYEIFLANHFEQGNTERAD 519


>gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis]
          Length = 829

 Score =  424 bits (1090), Expect = e-116
 Identities = 213/478 (44%), Positives = 326/478 (68%), Gaps = 1/478 (0%)
 Frame = -3

Query: 1833 PEDEYHKLADSIHDPLEKLEGITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLR 1654
            P  E   L  ++  P+     + +I  + + G +W TLS++F  ++F   L+  ILL+L+
Sbjct: 193  PRSEPSHLIHTVTKPIAPNNVVKAICNAFRSGWTWDTLSREFHHIEFNEQLIEKILLELK 252

Query: 1653 DPIDSRKALKFFHWTAKEMKFDHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGN 1474
             PID++ AL FFHW A  + F H + SYCL IHILV+  L  DA+A++E++L K++  G+
Sbjct: 253  QPIDAKWALGFFHWAAHRVNFQHCLRSYCLAIHILVRARLNLDARALIETVLKKNA--GD 310

Query: 1473 SQLFVVLDSLMESCRAVDSVPLVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFN 1294
            S  F+V+DSL+   +  DS P VFDL +Q+ ++LR+ D   D    L + GF L++++FN
Sbjct: 311  SSKFLVVDSLLSCYKITDSTPFVFDLLVQSYSRLRMFDSGFDVCCYLEEHGFSLNLVSFN 370

Query: 1293 TLLHVLQKSGNVDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGK 1114
            T +HV++KS    +VW +YE MI RR  PN++T++T+IS+LCKEGKL++++ ++DR+HG+
Sbjct: 371  TFIHVVEKSDENTMVWRIYEHMIWRRIYPNQSTIRTLISSLCKEGKLQKYVEMLDRIHGR 430

Query: 1113 RSSVPQLIVNTCLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDA 934
            R S P +IVNT LV+++ E+ R+++G+ LLK MLQ+NM+ DTI+YSL+V+AK+KLG++ +
Sbjct: 431  RCS-PSVIVNTSLVFKIFEEGRVEEGVVLLKRMLQRNMLFDTIAYSLIVYAKLKLGNIVS 489

Query: 933  AKEIYEEMLKRGFEENSFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIK 754
            A+++YEEMLKRGF  N FV +LF+ AYC EGRIDE   +++++E +G KP  E +N L++
Sbjct: 490  AQDVYEEMLKRGFRANPFVYTLFIRAYCKEGRIDETHCMMKDMEDMGLKPYEETYNSLVE 549

Query: 753  GCSLNGRLEESLEFCKHMMRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSP 574
              +  GRLEESL  C+ MM  G +PS ++ N M  KLC NG+ + A+ M T LLEKGFSP
Sbjct: 550  CYAKAGRLEESLRNCEVMMEKGFVPSCAAFNEMVHKLCENGEAEKANAMLTRLLEKGFSP 609

Query: 573  DETTYSHLVSGYCRDDDKEGLVKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEK 403
            ++ TY+ L+ GY +  D E ++KL  EM  +               LC+SG+L++AEK
Sbjct: 610  NDITYASLIVGYEKKGDVEEVLKLFYEMVSKSISPGSLVFTTLIKSLCRSGKLEQAEK 667



 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 55/289 (19%), Positives = 120/289 (41%), Gaps = 5/289 (1%)
 Frame = -3

Query: 1191 KTMISTLCKE--GKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKDRIQDGLFLLKH 1018
            + +I T+ K+  G   +FL +   +   + +     V   LV           G  +  +
Sbjct: 297  RALIETVLKKNAGDSSKFLVVDSLLSCYKITDSTPFVFDLLVQSYSRLRMFDSGFDVCCY 356

Query: 1017 MLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCSLFVGAYCDEGR 838
            + +    L+ +S++  +    K  +      IYE M+ R    N       + + C EG+
Sbjct: 357  LEEHGFSLNLVSFNTFIHVVEKSDENTMVWRIYEHMIWRRIYPNQSTIRTLISSLCKEGK 416

Query: 837  IDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRLGLLPSSSSINV 658
            + + + +L+ I      PS      L+      GR+EE +   K M++  +L  + + ++
Sbjct: 417  LQKYVEMLDRIHGRRCSPSVIVNTSLVFKIFEEGRVEEGVVLLKRMLQRNMLFDTIAYSL 476

Query: 657  MFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRD---DDKEGLVKLLCEME 487
            +       G    A +++  +L++GF  +   Y+  +  YC++   D+   ++K + +M 
Sbjct: 477  IVYAKLKLGNIVSAQDVYEEMLKRGFRANPFVYTLFIRAYCKEGRIDETHCMMKDMEDMG 536

Query: 486  YRXXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEALI 340
             +                K+GRL+E+ +  E+M  +  VPS   +  ++
Sbjct: 537  LKPYEETYNSLVECY--AKAGRLEESLRNCEVMMEKGFVPSCAAFNEMV 583


>ref|XP_007022703.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            4 [Theobroma cacao] gi|508722331|gb|EOY14228.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 4 [Theobroma cacao]
          Length = 569

 Score =  420 bits (1079), Expect = e-114
 Identities = 229/484 (47%), Positives = 329/484 (67%), Gaps = 5/484 (1%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            + SI  S ++  +W TL++ F S++ T++LV  +LLQL+ P  +R AL FF+W+AK   F
Sbjct: 46   VNSISDSFKKTHNWGTLTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSAKSQNF 105

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
             H I SYC+ IHILV    + +AK +L S L   + D       +L+SL+ S   V S  
Sbjct: 106  KHQIYSYCIAIHILVHAKQLPEAKILLHSALKTSAPDSTRSC--ILESLLGSYNVVGSST 163

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFEL---LFDKGFVLSVITFNTLLHVLQKSGNVDLVWGV 1240
            LVFDL +Q  AKLR+++   DAFE+   L + GF L++++FN LLH + KSG   +VW V
Sbjct: 164  LVFDLLVQAYAKLRMLE---DAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKV 220

Query: 1239 YELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMI 1060
            YE MI++RK PNE T++TMIS LCKEGKL+  + ++D++ GKR S P +IVNT LV+++I
Sbjct: 221  YEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCS-PIVIVNTHLVFKVI 279

Query: 1059 EKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSF 880
            E+ RI+DG+ LLK MLQKN+ILD+I+YS VV  K+KLG+L+ A E++EEMLKRGF  NSF
Sbjct: 280  EEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSF 339

Query: 879  VCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHM 700
            + S F+ AY + GRI EA  +L E+E +G KP +E FN+LI+GC+  G ++ S+  C+ M
Sbjct: 340  LFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEM 399

Query: 699  MRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDK 520
            +R GL+PS S+ N M   LC  G ++ A+ + T++L+KGF P+ETTYSHL++GY ++ + 
Sbjct: 400  IRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNI 459

Query: 519  EGLVKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEAL 343
            + + KL  EMEY+               LC  G+L+EAE+Y  IM+ RS+V S ++YEAL
Sbjct: 460  QQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKDRSVVLSEDIYEAL 519

Query: 342  I-GH 334
            I GH
Sbjct: 520  ITGH 523



 Score = 77.8 bits (190), Expect = 2e-11
 Identities = 71/357 (19%), Positives = 146/357 (40%), Gaps = 18/357 (5%)
 Frame = -3

Query: 1590 DHGIS----SYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAV 1423
            +HG S    S+  ++H ++K G       + E ++ K  +     +  ++ +L +  +  
Sbjct: 191  NHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISALCKEGKLQ 250

Query: 1422 DSVPLVFDLFMQTCAKLRIVDGIL-----------DAFELL---FDKGFVLSVITFNTLL 1285
              V L+  +  + C+ + IV+  L           D  ELL     K  +L  I ++ ++
Sbjct: 251  VVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFVV 310

Query: 1284 HVLQKSGNVDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSS 1105
            H   K GN++L W V+E M+KR    N     + I    + G++    +++  M      
Sbjct: 311  HTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMGLK 370

Query: 1104 VPQLIVNTCLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKE 925
                  N  L+    +   ++  +   + M+++ ++    +++ +V    ++GD + A  
Sbjct: 371  PYDETFNY-LIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANA 429

Query: 924  IYEEMLKRGFEENSFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCS 745
            +   +L +GF  N    S  +  Y  EG I +   L  E+E     P    F  LI+   
Sbjct: 430  LLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLC 489

Query: 744  LNGRLEESLEFCKHMMRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSP 574
              G+LEE+  + + M    ++ S      +       G    A  ++  ++ +G  P
Sbjct: 490  HCGKLEEAERYLRIMKDRSVVLSEDIYEALITGHFEKGDKTGAGIIYNEMVARGMKP 546


>ref|XP_007022702.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            3 [Theobroma cacao] gi|508722330|gb|EOY14227.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 3 [Theobroma cacao]
          Length = 563

 Score =  420 bits (1079), Expect = e-114
 Identities = 229/484 (47%), Positives = 329/484 (67%), Gaps = 5/484 (1%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            + SI  S ++  +W TL++ F S++ T++LV  +LLQL+ P  +R AL FF+W+AK   F
Sbjct: 46   VNSISDSFKKTHNWGTLTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSAKSQNF 105

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
             H I SYC+ IHILV    + +AK +L S L   + D       +L+SL+ S   V S  
Sbjct: 106  KHQIYSYCIAIHILVHAKQLPEAKILLHSALKTSAPDSTRSC--ILESLLGSYNVVGSST 163

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFEL---LFDKGFVLSVITFNTLLHVLQKSGNVDLVWGV 1240
            LVFDL +Q  AKLR+++   DAFE+   L + GF L++++FN LLH + KSG   +VW V
Sbjct: 164  LVFDLLVQAYAKLRMLE---DAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKV 220

Query: 1239 YELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMI 1060
            YE MI++RK PNE T++TMIS LCKEGKL+  + ++D++ GKR S P +IVNT LV+++I
Sbjct: 221  YEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCS-PIVIVNTHLVFKVI 279

Query: 1059 EKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSF 880
            E+ RI+DG+ LLK MLQKN+ILD+I+YS VV  K+KLG+L+ A E++EEMLKRGF  NSF
Sbjct: 280  EEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSF 339

Query: 879  VCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHM 700
            + S F+ AY + GRI EA  +L E+E +G KP +E FN+LI+GC+  G ++ S+  C+ M
Sbjct: 340  LFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEM 399

Query: 699  MRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDK 520
            +R GL+PS S+ N M   LC  G ++ A+ + T++L+KGF P+ETTYSHL++GY ++ + 
Sbjct: 400  IRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNI 459

Query: 519  EGLVKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEAL 343
            + + KL  EMEY+               LC  G+L+EAE+Y  IM+ RS+V S ++YEAL
Sbjct: 460  QQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKDRSVVLSEDIYEAL 519

Query: 342  I-GH 334
            I GH
Sbjct: 520  ITGH 523



 Score = 78.2 bits (191), Expect = 2e-11
 Identities = 75/372 (20%), Positives = 151/372 (40%), Gaps = 22/372 (5%)
 Frame = -3

Query: 1590 DHGIS----SYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAV 1423
            +HG S    S+  ++H ++K G       + E ++ K  +     +  ++ +L +  +  
Sbjct: 191  NHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISALCKEGKLQ 250

Query: 1422 DSVPLVFDLFMQTCAKLRIVDGIL-----------DAFELL---FDKGFVLSVITFNTLL 1285
              V L+  +  + C+ + IV+  L           D  ELL     K  +L  I ++ ++
Sbjct: 251  VVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFVV 310

Query: 1284 HVLQKSGNVDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSS 1105
            H   K GN++L W V+E M+KR    N     + I    + G++    +++  M      
Sbjct: 311  HTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMGLK 370

Query: 1104 VPQLIVNTCLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKE 925
                  N  L+    +   ++  +   + M+++ ++    +++ +V    ++GD + A  
Sbjct: 371  PYDETFNY-LIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANA 429

Query: 924  IYEEMLKRGFEENSFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCS 745
            +   +L +GF  N    S  +  Y  EG I +   L  E+E     P    F  LI+   
Sbjct: 430  LLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLC 489

Query: 744  LNGRLEESLEFCKHMMRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDE- 568
              G+LEE+  + + M    ++ S      +       G    A  ++  ++ +G  P + 
Sbjct: 490  HCGKLEEAERYLRIMKDRSVVLSEDIYEALITGHFEKGDKTGAGIIYNEMVARGMKPHKW 549

Query: 567  ---TTYSHLVSG 541
               T  S  V G
Sbjct: 550  GNFTQISEAVEG 561


>ref|XP_007022700.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
            [Theobroma cacao] gi|508722328|gb|EOY14225.1|
            Pentatricopeptide repeat superfamily protein, putative
            isoform 1 [Theobroma cacao]
          Length = 596

 Score =  420 bits (1079), Expect = e-114
 Identities = 229/484 (47%), Positives = 329/484 (67%), Gaps = 5/484 (1%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            + SI  S ++  +W TL++ F S++ T++LV  +LLQL+ P  +R AL FF+W+AK   F
Sbjct: 46   VNSISDSFKKTHNWGTLTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSAKSQNF 105

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
             H I SYC+ IHILV    + +AK +L S L   + D       +L+SL+ S   V S  
Sbjct: 106  KHQIYSYCIAIHILVHAKQLPEAKILLHSALKTSAPDSTRSC--ILESLLGSYNVVGSST 163

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFEL---LFDKGFVLSVITFNTLLHVLQKSGNVDLVWGV 1240
            LVFDL +Q  AKLR+++   DAFE+   L + GF L++++FN LLH + KSG   +VW V
Sbjct: 164  LVFDLLVQAYAKLRMLE---DAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKV 220

Query: 1239 YELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMI 1060
            YE MI++RK PNE T++TMIS LCKEGKL+  + ++D++ GKR S P +IVNT LV+++I
Sbjct: 221  YEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCS-PIVIVNTHLVFKVI 279

Query: 1059 EKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSF 880
            E+ RI+DG+ LLK MLQKN+ILD+I+YS VV  K+KLG+L+ A E++EEMLKRGF  NSF
Sbjct: 280  EEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSF 339

Query: 879  VCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHM 700
            + S F+ AY + GRI EA  +L E+E +G KP +E FN+LI+GC+  G ++ S+  C+ M
Sbjct: 340  LFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEM 399

Query: 699  MRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDK 520
            +R GL+PS S+ N M   LC  G ++ A+ + T++L+KGF P+ETTYSHL++GY ++ + 
Sbjct: 400  IRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNI 459

Query: 519  EGLVKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEAL 343
            + + KL  EMEY+               LC  G+L+EAE+Y  IM+ RS+V S ++YEAL
Sbjct: 460  QQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKDRSVVLSEDIYEAL 519

Query: 342  I-GH 334
            I GH
Sbjct: 520  ITGH 523



 Score = 77.8 bits (190), Expect = 2e-11
 Identities = 71/357 (19%), Positives = 146/357 (40%), Gaps = 18/357 (5%)
 Frame = -3

Query: 1590 DHGIS----SYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAV 1423
            +HG S    S+  ++H ++K G       + E ++ K  +     +  ++ +L +  +  
Sbjct: 191  NHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISALCKEGKLQ 250

Query: 1422 DSVPLVFDLFMQTCAKLRIVDGIL-----------DAFELL---FDKGFVLSVITFNTLL 1285
              V L+  +  + C+ + IV+  L           D  ELL     K  +L  I ++ ++
Sbjct: 251  VVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFVV 310

Query: 1284 HVLQKSGNVDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSS 1105
            H   K GN++L W V+E M+KR    N     + I    + G++    +++  M      
Sbjct: 311  HTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMGLK 370

Query: 1104 VPQLIVNTCLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKE 925
                  N  L+    +   ++  +   + M+++ ++    +++ +V    ++GD + A  
Sbjct: 371  PYDETFNY-LIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANA 429

Query: 924  IYEEMLKRGFEENSFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCS 745
            +   +L +GF  N    S  +  Y  EG I +   L  E+E     P    F  LI+   
Sbjct: 430  LLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLC 489

Query: 744  LNGRLEESLEFCKHMMRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSP 574
              G+LEE+  + + M    ++ S      +       G    A  ++  ++ +G  P
Sbjct: 490  HCGKLEEAERYLRIMKDRSVVLSEDIYEALITGHFEKGDKTGAGIIYNEMVARGMKP 546


>ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citrus clementina]
            gi|557532668|gb|ESR43851.1| hypothetical protein
            CICLE_v10011485mg [Citrus clementina]
          Length = 521

 Score =  410 bits (1054), Expect = e-111
 Identities = 211/479 (44%), Positives = 317/479 (66%), Gaps = 1/479 (0%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            +T+I    +RG +W TLS++F S+   ++LV N+LL+L++P+D+++AL FFHW+A    +
Sbjct: 40   VTAICDCFRRGWNWDTLSKQFNSIHLNDSLVENVLLELKEPVDAKRALGFFHWSAHHKSY 99

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
             H + SY + IHILV+  L+ DA+A++ES+L K    G+   F V+DSL+++    DS+P
Sbjct: 100  QHNLCSYSVTIHILVRARLLVDARALIESVLEKHI--GDDSRFSVVDSLLDTYNVADSIP 157

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVWGVYEL 1231
            LVFDL +QT +K+R+ +   D    L  +GF LS+I+FNTL+HV+ KS   DL       
Sbjct: 158  LVFDLLVQTYSKMRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDL------- 210

Query: 1230 MIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKD 1051
                                     L+ ++ ++DR+HGKR S P +IVNT L+  +I+++
Sbjct: 211  -------------------------LQTYVDMLDRIHGKRCS-PMVIVNTSLILRIIQEE 244

Query: 1050 RIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCS 871
            RI++G+ LLK ML+KNMI DTI+YSL+V+AKVK+ +L++A  +YEEMLKRGF  NSFV +
Sbjct: 245  RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 304

Query: 870  LFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRL 691
             F+GAYC+ G+I+EA  L++E+E  G KP +E FN LI+GC+   R+EESL +C+ MM  
Sbjct: 305  TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 364

Query: 690  GLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEGL 511
             LLPS S+ N M  +LC  G  K A+ M T+ L+KGFSP+E TYSHL+ GY ++ + + +
Sbjct: 365  KLLPSCSAFNEMIRRLCECGNVKQANGMLTLALDKGFSPNEMTYSHLIGGYAKEGEIQEV 424

Query: 510  VKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEALIG 337
            +KL  EMEY+               LC+ G+L+EA+KY +IM++ SLVP  ++YE+L+G
Sbjct: 425  LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 483


>ref|XP_006391386.1| hypothetical protein EUTSA_v10018418mg [Eutrema salsugineum]
            gi|557087820|gb|ESQ28672.1| hypothetical protein
            EUTSA_v10018418mg [Eutrema salsugineum]
          Length = 511

 Score =  409 bits (1052), Expect = e-111
 Identities = 215/473 (45%), Positives = 313/473 (66%), Gaps = 1/473 (0%)
 Frame = -3

Query: 1785 EKLEGITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTA 1606
            E+L  I +I+ SL+  E+W TLS K+ S+ F+++LV  ILL+ + P  +++AL FFHW+A
Sbjct: 38   EQLLLIDAILESLRNSENWDTLSNKYSSIDFSDSLVKKILLRFKQPETAKRALSFFHWSA 97

Query: 1605 KEMKFDHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRA 1426
                  HG SSY + IHILV+  L+ DA+A++ES L     D +     +LDSL+ +   
Sbjct: 98   NTRNLRHGTSSYAVAIHILVRARLLVDARALIESSLLNSDSDSD-----LLDSLLSTYDV 152

Query: 1425 VDSVPLVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVW 1246
              S PLVFDL +Q  AKLR+++   D F  L D+GF LSVIT NTLLH   KS  +DLVW
Sbjct: 153  SCSTPLVFDLLVQGYAKLRLLESGFDVFHRLCDRGFSLSVITLNTLLHFAAKSSRIDLVW 212

Query: 1245 GVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYE 1066
             +YEL   +R  PNE T++ MIS LCKEGKL+  ++++DR+HGKRSS P LIVNT LV+ 
Sbjct: 213  RIYELATDKRIYPNETTIQIMISALCKEGKLKEVVALLDRIHGKRSS-PPLIVNTSLVFR 271

Query: 1065 MIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEEN 886
            ++E +RI++G+ LLK +LQKNM++DTI YSLVV A+ K GDL++A+++++EML+RGF+ N
Sbjct: 272  VLESNRIEEGMSLLKRLLQKNMVIDTIGYSLVVLARTKQGDLESARKVFDEMLQRGFDAN 331

Query: 885  SFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCK 706
            +FV + F+ AY ++G I+EA  L+ E+E  G  P  E F+ +I GC+  GR EESL++C+
Sbjct: 332  AFVYTAFIKAYTEKGDIEEAERLIAEMENSGIDPYEETFDSVIVGCARCGREEESLKYCE 391

Query: 705  HMMRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDD 526
             M+  GLLPS S+ N M ++L      + A+E+ T  ++KGF+PDE TY+HL+ G+ +  
Sbjct: 392  MMVTRGLLPSCSAFNEMVKRLSKIENVRRANEILTKSVDKGFTPDEQTYTHLIQGFAKGK 451

Query: 525  DKEGLVKLLCEMEYRXXXXXXXXXXXXXXLC-KSGRLKEAEKYKEIMEARSLV 370
              +  +KL  EMEYR                   G+++ AEKY  IM+ R ++
Sbjct: 452  CIDIALKLFYEMEYRKISPGFEVFRSLIMGLWCCGKVEAAEKYLRIMKHRFIL 504


>ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297332864|gb|EFH63282.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 539

 Score =  399 bits (1024), Expect = e-108
 Identities = 208/478 (43%), Positives = 305/478 (63%), Gaps = 1/478 (0%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            I SI  SLQ  ++W+TLS KF S+  +++L+  ILL+   P  +++AL FFHW+A     
Sbjct: 46   IDSISKSLQSNDNWETLSTKFSSIDLSDSLIETILLRFNSPETAKRALTFFHWSAHTRNL 105

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
             HGI SY + IHILVK  L+ DA+A++ES L   S D       ++DSL+++     S P
Sbjct: 106  RHGIRSYAVTIHILVKARLLIDARALIESSLLNSSSD-------LVDSLLDTYVNSSSTP 158

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKSGNVDLVWGVYEL 1231
            LVFDL +Q  AK+R ++   + F+ L D GF LSVIT NTL+H   KS  VDLVW +YE 
Sbjct: 159  LVFDLLVQCYAKIRYLELGFEVFKRLCDCGFSLSVITLNTLIHFAAKSNRVDLVWRIYEF 218

Query: 1230 MIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMIEKD 1051
             I +R  PNE T++ MIS LCKEG+L+  + ++DR++GKR  +P +IVNT LV+ ++E+ 
Sbjct: 219  AIDKRIYPNETTIRIMISVLCKEGRLKEVVDLLDRIYGKRC-LPSVIVNTSLVFRVLEEK 277

Query: 1050 RIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSFVCS 871
            R+++ + LLK +L KNM++D I YS+VV+AK K GDL+ A+ +++EM++RGF  N+FV +
Sbjct: 278  RVEESMSLLKRLLMKNMVVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFVYT 337

Query: 870  LFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHMMRL 691
             FV   C+ G ++EA  L+ E+E  G  P  E FN LI GC+  GR E+ LE+C+ M+  
Sbjct: 338  AFVRVCCERGDVEEAERLMSEMEDSGVNPYEETFNFLIVGCARFGREEKGLEYCEIMVAR 397

Query: 690  GLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDKEGL 511
            GL+PS S+ N M ++L        A+E+ T  ++KGF PDE TYSHL+ G+   +  +  
Sbjct: 398  GLMPSCSAFNGMVKRLSEIDNVNRANEILTKSIDKGFVPDEHTYSHLIRGFVEGNSIDQA 457

Query: 510  VKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEKYKEIMEARSLVPSPNVYEALI 340
            +KL  EMEYR               LC  G+++  EKY  IM+ R + P+ ++YEA+I
Sbjct: 458  LKLFYEMEYRKISPGFEVFRSLIVGLCACGKVEAGEKYLRIMKRRLIEPNADIYEAMI 515



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 67/345 (19%), Positives = 142/345 (41%), Gaps = 4/345 (1%)
 Frame = -3

Query: 1614 WTAKEMKFDHGI----SSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDS 1447
            W   E   D  I    ++  ++I +L K G +K+   +L+ I  K               
Sbjct: 213  WRIYEFAIDKRIYPNETTIRIMISVLCKEGRLKEVVDLLDRIYGK--------------- 257

Query: 1446 LMESCRAVDSVPLVFDLFMQTCAKLRIVDGILDAFELLFDKGFVLSVITFNTLLHVLQKS 1267
                 R + SV +   L  +   + R+ +  +   + L  K  V+ VI ++ +++   K 
Sbjct: 258  -----RCLPSVIVNTSLVFRVLEEKRVEES-MSLLKRLLMKNMVVDVIGYSIVVYAKTKK 311

Query: 1266 GNVDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIV 1087
            G+++    V++ MI+R    N       +   C+ G +E    ++  M     +  +   
Sbjct: 312  GDLECARNVFDEMIRRGFSANAFVYTAFVRVCCERGDVEEAERLMSEMEDSGVNPYEETF 371

Query: 1086 NTCLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEML 907
            N  L+       R + GL   + M+ + ++    +++ +V    ++ +++ A EI  + +
Sbjct: 372  NF-LIVGCARFGREEKGLEYCEIMVARGLMPSCSAFNGMVKRLSEIDNVNRANEILTKSI 430

Query: 906  KRGFEENSFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLE 727
             +GF  +    S  +  + +   ID+A+ L  E+E     P  E F  LI G    G++E
Sbjct: 431  DKGFVPDEHTYSHLIRGFVEGNSIDQALKLFYEMEYRKISPGFEVFRSLIVGLCACGKVE 490

Query: 726  ESLEFCKHMMRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLL 592
               ++ + M R  + P++     M       G    AD+++  ++
Sbjct: 491  AGEKYLRIMKRRLIEPNADIYEAMINAFQKIGDKTNADKVYNEMI 535


>ref|XP_007022704.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            5 [Theobroma cacao] gi|508722332|gb|EOY14229.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 5 [Theobroma cacao]
          Length = 504

 Score =  398 bits (1022), Expect = e-108
 Identities = 215/460 (46%), Positives = 311/460 (67%), Gaps = 4/460 (0%)
 Frame = -3

Query: 1770 ITSIIGSLQRGESWKTLSQKFGSLKFTNTLVANILLQLRDPIDSRKALKFFHWTAKEMKF 1591
            + SI  S ++  +W TL++ F S++ T++LV  +LLQL+ P  +R AL FF+W+AK   F
Sbjct: 46   VNSISDSFKKTHNWGTLTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSAKSQNF 105

Query: 1590 DHGISSYCLIIHILVKGGLIKDAKAMLESILAKDSFDGNSQLFVVLDSLMESCRAVDSVP 1411
             H I SYC+ IHILV    + +AK +L S L   + D       +L+SL+ S   V S  
Sbjct: 106  KHQIYSYCIAIHILVHAKQLPEAKILLHSALKTSAPDSTRSC--ILESLLGSYNVVGSST 163

Query: 1410 LVFDLFMQTCAKLRIVDGILDAFEL---LFDKGFVLSVITFNTLLHVLQKSGNVDLVWGV 1240
            LVFDL +Q  AKLR+++   DAFE+   L + GF L++++FN LLH + KSG   +VW V
Sbjct: 164  LVFDLLVQAYAKLRMLE---DAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKV 220

Query: 1239 YELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVNTCLVYEMI 1060
            YE MI++RK PNE T++TMIS LCKEGKL+  + ++D++ GKR S P +IVNT LV+++I
Sbjct: 221  YEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCS-PIVIVNTHLVFKVI 279

Query: 1059 EKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLKRGFEENSF 880
            E+ RI+DG+ LLK MLQKN+ILD+I+YS VV  K+KLG+L+ A E++EEMLKRGF  NSF
Sbjct: 280  EEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSF 339

Query: 879  VCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEESLEFCKHM 700
            + S F+ AY + GRI EA  +L E+E +G KP +E FN+LI+GC+  G ++ S+  C+ M
Sbjct: 340  LFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEM 399

Query: 699  MRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVSGYCRDDDK 520
            +R GL+PS S+ N M   LC  G ++ A+ + T++L+KGF P+ETTYSHL++GY ++ + 
Sbjct: 400  IRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNI 459

Query: 519  EGLVKLLCEMEYR-XXXXXXXXXXXXXXLCKSGRLKEAEK 403
            + + KL  EMEY+               LC  G+L+EAE+
Sbjct: 460  QQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAER 499



 Score = 74.7 bits (182), Expect = 2e-10
 Identities = 76/369 (20%), Positives = 145/369 (39%), Gaps = 5/369 (1%)
 Frame = -3

Query: 1431 RAVDSVPLVFDLFMQTCAKLRIVDGILDAFELLF----DKGFVLSVITFNTLLHVLQKSG 1264
            +   SV L   L  Q   +L+  +    A    +     + F   + ++   +H+L    
Sbjct: 64   KTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSAKSQNFKHQIYSYCIAIHIL---- 119

Query: 1263 NVDLVWGVYELMIKRRKCPNEATVKTMISTLCKEGKLERFLSIVDRMHGKRSSVPQLIVN 1084
                   V+   +   K    + +KT      +   LE  L   + + G  + V  L+V 
Sbjct: 120  -------VHAKQLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVV-GSSTLVFDLLVQ 171

Query: 1083 TCLVYEMIEKDRIQDGLFLLKHMLQKNMILDTISYSLVVFAKVKLGDLDAAKEIYEEMLK 904
                  M+E D  +   +L  H       L  +S++ ++   +K G+     ++YE M++
Sbjct: 172  AYAKLRMLE-DAFEVCCYLENH----GFSLTLLSFNALLHGILKSGENVMVWKVYEHMIE 226

Query: 903  RGFEENSFVCSLFVGAYCDEGRIDEAIGLLEEIERLGFKPSNEAFNHLIKGCSLNGRLEE 724
            +    N       + A C EG++   + LL++I      P      HL+      GR+E+
Sbjct: 227  KRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIED 286

Query: 723  SLEFCKHMMRLGLLPSSSSINVMFEKLCGNGKTKLADEMFTMLLEKGFSPDETTYSHLVS 544
             +E  K M++  L+  S + + +       G  +LA E+   +L++GF  +   +S  + 
Sbjct: 287  GMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIR 346

Query: 543  GYCRDDDKEGLVKLLCEMEYRXXXXXXXXXXXXXXLC-KSGRLKEAEKYKEIMEARSLVP 367
             Y           +L EME                 C K+G +K + ++ E M  R LVP
Sbjct: 347  AYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVP 406

Query: 366  SPNVYEALI 340
            S + +  ++
Sbjct: 407  SCSTFNEMV 415