BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00004766
         (302 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]   187   1e-45
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       180   2e-43
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   180   2e-43
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       179   4e-43
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   178   8e-43
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   177   1e-42
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   177   1e-42
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   177   1e-42
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...   177   1e-42
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola...   177   1e-42
emb|CBI26821.3| unnamed protein product [Vitis vinifera]              176   4e-42
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   176   4e-42
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      176   4e-42
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      176   4e-42
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]   176   4e-42
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       175   5e-42
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   174   9e-42
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   174   9e-42
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   174   9e-42
dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]      174   1e-41

>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
          Length = 1118

 Score =  187 bits (475), Expect = 1e-45
 Identities = 82/100 (82%), Positives = 93/100 (93%)
 Frame = +2

Query: 2   SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
           +D +++VKGKVAVAKNPCLHPGDLRVL AIDVPALHHMV+CIVFP+KG RPHPNECSGSD
Sbjct: 682 TDHNYIVKGKVAVAKNPCLHPGDLRVLEAIDVPALHHMVNCIVFPQKGTRPHPNECSGSD 741

Query: 182 LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
           LDGD+Y VCWD +LIPPKQ  PMDY+PAPATRL+HEVTI+
Sbjct: 742 LDGDIYIVCWDPDLIPPKQFDPMDYNPAPATRLDHEVTIQ 781


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  180 bits (457), Expect = 2e-43
 Identities = 76/100 (76%), Positives = 90/100 (90%)
 Frame = +2

Query: 2    SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
            ++ DF++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 744  ANCDFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSD 803

Query: 182  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            LDGD+YFVCWD +LIPP+QV  MDY PAP T+L+H+VTIE
Sbjct: 804  LDGDIYFVCWDPDLIPPRQVQSMDYTPAPTTQLDHDVTIE 843


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  180 bits (456), Expect = 2e-43
 Identities = 74/100 (74%), Positives = 91/100 (91%)
 Frame = +2

Query: 2    SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
            ++ DF+++G V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 745  TNCDFILEGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSD 804

Query: 182  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            LDGD+YFVCWD +L+PP+Q  PMDY PAP+T+L+H+VTIE
Sbjct: 805  LDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDHDVTIE 844


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  179 bits (454), Expect = 4e-43
 Identities = 75/97 (77%), Positives = 89/97 (91%)
 Frame = +2

Query: 11  DFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSDLDG 190
           +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KG RPHPNECSGSDLDG
Sbjct: 438 NFILKGNVVVAKNPCLHPGDIRVLKAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDG 497

Query: 191 DVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
           D+YFVCWD +LIPP+QV PMDY PAP+ +L+H+VTIE
Sbjct: 498 DIYFVCWDPDLIPPRQVQPMDYTPAPSIQLDHDVTIE 534


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  178 bits (451), Expect = 8e-43
 Identities = 77/94 (81%), Positives = 86/94 (91%)
 Frame = +2

Query: 20   VKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSDLDGDVY 199
            V+GKV VAKNPCLHPGD+RVLTA+DVP L HMVDC+VFPK G RPHPNECSGSDLDGD+Y
Sbjct: 747  VRGKVVVAKNPCLHPGDVRVLTAVDVPELRHMVDCVVFPKNGKRPHPNECSGSDLDGDIY 806

Query: 200  FVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            FVCWDS+LIP KQV PMDY+PAP TRL+H+VTIE
Sbjct: 807  FVCWDSDLIPTKQVEPMDYNPAPTTRLDHDVTIE 840


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  177 bits (450), Expect = 1e-42
 Identities = 77/100 (77%), Positives = 87/100 (87%)
 Frame = +2

Query: 2    SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
            S+  F+V+GKV VAKNPCLHPGD+RVLTA++VP LHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 733  SEQRFIVQGKVVVAKNPCLHPGDVRVLTAVNVPDLHHMVDCVVFPQKGSRPHPNECSGSD 792

Query: 182  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            LDGD+YFVCWD ELIP KQ+ PMDY PAP   L HEVTIE
Sbjct: 793  LDGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVTIE 832


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  177 bits (450), Expect = 1e-42
 Identities = 73/100 (73%), Positives = 91/100 (91%)
 Frame = +2

Query: 2    SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
            ++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 742  TNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSD 801

Query: 182  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            LDGD+YFVCWD ++IPP+QV PM+Y PAP+ +L+H+VTIE
Sbjct: 802  LDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIE 841


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  177 bits (450), Expect = 1e-42
 Identities = 73/100 (73%), Positives = 91/100 (91%)
 Frame = +2

Query: 2    SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
            ++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 741  TNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSD 800

Query: 182  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            LDGD+YFVCWD ++IPP+QV PM+Y PAP+ +L+H+VTIE
Sbjct: 801  LDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIE 840


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  177 bits (450), Expect = 1e-42
 Identities = 73/100 (73%), Positives = 91/100 (91%)
 Frame = +2

Query: 2    SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
            ++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 708  TNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSD 767

Query: 182  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            LDGD+YFVCWD ++IPP+QV PM+Y PAP+ +L+H+VTIE
Sbjct: 768  LDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIE 807


>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  177 bits (450), Expect = 1e-42
 Identities = 73/100 (73%), Positives = 91/100 (91%)
 Frame = +2

Query: 2   SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
           ++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 590 TNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSD 649

Query: 182 LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
           LDGD+YFVCWD ++IPP+QV PM+Y PAP+ +L+H+VTIE
Sbjct: 650 LDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIE 689


>emb|CBI26821.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score =  176 bits (445), Expect = 4e-42
 Identities = 72/97 (74%), Positives = 90/97 (92%)
 Frame = +2

Query: 11  DFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSDLDG 190
           +F+++GKV VAKNPCLHPGD+R+L+A+DVPALHHMVDC+VFP+KGMRPHP+ECSGSDLDG
Sbjct: 580 NFILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDCVVFPQKGMRPHPDECSGSDLDG 639

Query: 191 DVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
           D+YFVCWD +LIPP+Q++PMDY PAP   L+H+V IE
Sbjct: 640 DIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVMIE 676


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  176 bits (445), Expect = 4e-42
 Identities = 72/97 (74%), Positives = 90/97 (92%)
 Frame = +2

Query: 11   DFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSDLDG 190
            +F+++GKV VAKNPCLHPGD+R+L+A+DVPALHHMVDC+VFP+KGMRPHP+ECSGSDLDG
Sbjct: 746  NFILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDCVVFPQKGMRPHPDECSGSDLDG 805

Query: 191  DVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            D+YFVCWD +LIPP+Q++PMDY PAP   L+H+V IE
Sbjct: 806  DIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVMIE 842


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  176 bits (445), Expect = 4e-42
 Identities = 77/100 (77%), Positives = 88/100 (88%)
 Frame = +2

Query: 2    SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
            S+  F+V+GKV VAKNPCLHPGD+RVL A++VP LHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 733  SERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGTRPHPNECSGSD 792

Query: 182  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            LDGDVYFVCWD ELIP KQ+ PMDY PA  T+L+HEVTIE
Sbjct: 793  LDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIE 832


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  176 bits (445), Expect = 4e-42
 Identities = 77/100 (77%), Positives = 88/100 (88%)
 Frame = +2

Query: 2    SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
            S+  F+V+GKV VAKNPCLHPGD+RVL A++VP LHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 733  SERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGTRPHPNECSGSD 792

Query: 182  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            LDGDVYFVCWD ELIP KQ+ PMDY PA  T+L+HEVTIE
Sbjct: 793  LDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIE 832


>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
          Length = 697

 Score =  176 bits (445), Expect = 4e-42
 Identities = 72/97 (74%), Positives = 90/97 (92%)
 Frame = +2

Query: 11  DFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSDLDG 190
           +F+++GKV VAKNPCLHPGD+R+L+A+DVPALHHMVDC+VFP+KGMRPHP+ECSGSDLDG
Sbjct: 290 NFILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDCVVFPQKGMRPHPDECSGSDLDG 349

Query: 191 DVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
           D+YFVCWD +LIPP+Q++PMDY PAP   L+H+V IE
Sbjct: 350 DIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVMIE 386


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  175 bits (444), Expect = 5e-42
 Identities = 75/100 (75%), Positives = 87/100 (87%)
 Frame = +2

Query: 2    SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
            S  +++V G+V VAKNPCLHPGD+RVL A++VPALHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 756  SGQNYIVVGRVVVAKNPCLHPGDVRVLRAVNVPALHHMVDCVVFPQKGSRPHPNECSGSD 815

Query: 182  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            LDGD+YFVCWD ELIP KQ  PMDY PAP TRL+H+V IE
Sbjct: 816  LDGDIYFVCWDDELIPQKQFEPMDYSPAPTTRLDHDVRIE 855


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
            tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
            tuberosum]
          Length = 1115

 Score =  174 bits (442), Expect = 9e-42
 Identities = 72/100 (72%), Positives = 90/100 (90%)
 Frame = +2

Query: 2    SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
            ++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 742  TNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSD 801

Query: 182  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            LDGD+YFVCWD ++IPP+QV  M+Y PAP+ +L+H+VTIE
Sbjct: 802  LDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHDVTIE 841


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  174 bits (442), Expect = 9e-42
 Identities = 72/100 (72%), Positives = 90/100 (90%)
 Frame = +2

Query: 2    SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
            ++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 742  TNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSD 801

Query: 182  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            LDGD+YFVCWD ++IPP+QV  M+Y PAP+ +L+H+VTIE
Sbjct: 802  LDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHDVTIE 841


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 1119

 Score =  174 bits (442), Expect = 9e-42
 Identities = 74/99 (74%), Positives = 87/99 (87%)
 Frame = +2

Query: 5    DSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSDL 184
            DS F+++GKV VAKNPCLHPGD+RVL A++VP LHHMVDC+VFP+KG RPHPNECSGSDL
Sbjct: 745  DSCFIIEGKVVVAKNPCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGHRPHPNECSGSDL 804

Query: 185  DGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            DGD+YFVCWD ELIPPKQ+ PMDY PAP   ++ +VTIE
Sbjct: 805  DGDIYFVCWDPELIPPKQIQPMDYTPAPPIEMDQDVTIE 843


>dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]
          Length = 1115

 Score =  174 bits (441), Expect = 1e-41
 Identities = 73/100 (73%), Positives = 88/100 (88%)
 Frame = +2

Query: 2    SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGMRPHPNECSGSD 181
            S+  F+V G V VAKNPCLHPGD+RVLTA+DVP+LHHM+DC+VFP+KG RPHPNECSGSD
Sbjct: 752  SNRHFIVTGTVVVAKNPCLHPGDVRVLTAVDVPSLHHMIDCVVFPQKGSRPHPNECSGSD 811

Query: 182  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLNHEVTIE 301
            LDGD+YFVCWD +LIPP+QV PMDY P P+  L+H+VT+E
Sbjct: 812  LDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTME 851