BLASTX nr result
ID: Mentha29_contig00004748
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00004748
(2977 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus... 674 0.0
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 550 e-153
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 327 3e-86
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 326 3e-86
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 321 1e-84
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 319 4e-84
gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlise... 317 2e-83
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 316 4e-83
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 315 8e-83
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 310 3e-81
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 310 3e-81
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 310 3e-81
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 310 3e-81
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 306 4e-80
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 304 2e-79
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 295 1e-76
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 287 2e-74
ref|XP_002312652.1| RNA recognition motif-containing family prot... 279 6e-72
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 242 6e-61
ref|XP_002315647.1| RNA recognition motif-containing family prot... 242 6e-61
>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
Length = 639
Score = 674 bits (1739), Expect = 0.0
Identities = 366/643 (56%), Positives = 408/643 (63%), Gaps = 6/643 (0%)
Frame = -2
Query: 2799 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQ 2620
MDPVTDEQLDYGDEEY GNQKMQYH GGAIPALAE+EMIG+ VGEGF+Q
Sbjct: 1 MDPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQ 60
Query: 2619 MQRSDTQVPSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKT 2440
MQRS+ PS VGN+ SK PGT E +A QEVNN +V EG+YA QK
Sbjct: 61 MQRSEAPPPSAVGNNSFSISKNTAPGTRAEAIASQEVNNGRVGNEGSYAPNGVQLSDQKN 120
Query: 2439 SLPGPGGPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNSEKVIGEPA 2260
+L GGP Q +DASQR RLPEVA++SQA + GYQGS M HK A D+MNNSE ++GEPA
Sbjct: 121 NLTAVGGPAQPVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEPA 180
Query: 2259 PLMYTNMGNTKGA--XXXXXXXXXXXXXXNINRSMDDEYMVRPS-VENGNTMLFVGELHW 2089
L+Y N G++KG N+NRSMDDEY++RPS ENGN M++VGELHW
Sbjct: 181 SLVYPNTGSSKGVPQAPSNLMNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIYVGELHW 240
Query: 2088 WTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGR 1909
WTTDAE+ESVLIQYG+VKEIKFFDERASGKSKGYCQVEFYDP+AA+ACK+GM GH FNGR
Sbjct: 241 WTTDAEVESVLIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAATACKDGMQGHIFNGR 300
Query: 1908 ACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGDA-XXXXX 1732
ACVV +A P T KQMGASY NK GRNP+ND AGRGNG NYPSGDA
Sbjct: 301 ACVVTYANPQTSKQMGASY-NKNQGQSQSQLQGRNPMNDGAGRGNGTNYPSGDAGRNFGR 359
Query: 1731 XXXXXXXNQPPNKXXXXXXXXXXXMI-NKNMI-XXXXXXXXXXXXXXXXXXXXXXXXXXX 1558
NQ PN+ + NKNMI
Sbjct: 360 GGGWGRGNQAPNRGPGAGPIRGRGGMGNKNMIGNAPGAGGGGAYGQGLNGPGFGGPPGMM 419
Query: 1557 XXXXXXXXXFDLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXX 1378
FDLAFMGRG GYG FSGP F GMLPPF GVNSMGLPGVAPHVNPAFF
Sbjct: 420 HPQGMMGPGFDLAFMGRGGGYGGFSGPPFQGMLPPFQGVNSMGLPGVAPHVNPAFFGRGM 479
Query: 1377 XXXXXXXXXXXXXXGPHSGMWNDTNIGAWGGEEHGRESSYGGEDNASEYGYGEASHDKGA 1198
GPHSGMWND N+G WGGEEHGRESSYGGEDNASEYGYGE SHDK
Sbjct: 480 NPNGMGMMGNPGMVGPHSGMWNDPNMGGWGGEEHGRESSYGGEDNASEYGYGEGSHDKSV 539
Query: 1197 RSSAASREKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDHDSG 1018
RSSAA REKE+ SER++ P R K+ +SG
Sbjct: 540 RSSAAPREKERTSEREY---PERKHREERENDGERNDRDSKYREEKDRYREHRHKERESG 596
Query: 1017 YDDDWDKGQXXXXXXXSGAVPEDDHRSRSRDADYGKRRRLPSE 889
YDDDWD+GQ SGAV E+DHRSRSRDADYGKRRR+PSE
Sbjct: 597 YDDDWDRGQSSRSRSRSGAVQEEDHRSRSRDADYGKRRRMPSE 639
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 550 bits (1416), Expect = e-153
Identities = 313/648 (48%), Positives = 360/648 (55%), Gaps = 11/648 (1%)
Frame = -2
Query: 2799 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQ 2620
MDP DEQLDYGDEEY G+ KMQYH G IPALAE+EM+GE +GEGFLQ
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60
Query: 2619 MQRSDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 2443
+QRS+ VPSV GN Q K + P + G+ +E +A EG YA T FP QK
Sbjct: 61 LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQK 120
Query: 2442 TSLPGPGGPPQAMDASQRGRLPEVAH--NSQAGYSGYQGSASMPHKNAADQMNNSEKVIG 2269
+ DA+Q+ R + NSQAG SGYQGS MP K AD M EK
Sbjct: 121 GEPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNAS 180
Query: 2268 EPAPLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFVGELHW 2089
E PLM + + + N+N + E RPS+ENGNTMLFVGELHW
Sbjct: 181 EATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGELHW 240
Query: 2088 WTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGR 1909
WTTDAE+ESVL QYG VKEIKFFDERASGKSKGYCQVEF+DP++A+ACKEGMNG++FNGR
Sbjct: 241 WTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFNGR 300
Query: 1908 ACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGDAXXXXXX 1729
ACVVAFATP TIKQMG+SY NK GR P+N+ GRG P
Sbjct: 301 ACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRGGPNYTPGDAGRNFGRG 360
Query: 1728 XXXXXXNQPPNKXXXXXXXXXXXMI-NKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1552
PN+ + +KNM+
Sbjct: 361 SWGRGGPGMPNRGPGGGPVRGRGAMGSKNMMVNPGAGNGAGGAFGQGLAGPAFGGPPAGL 420
Query: 1551 XXXXXXXF---DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXX 1381
D +FMGRGAGYG FSGPAFPGM+PPF VN MGLPGVAPHVNPAFF
Sbjct: 421 MHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHVNPAFFGRG 480
Query: 1380 XXXXXXXXXXXXXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASH 1210
GPH GMW DT+ G WGGEEHG RESSYGGEDNASEYGYGE SH
Sbjct: 481 MAANGMGMMSAAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSH 540
Query: 1209 DKGARSSAASREKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKD 1030
DKGARSSA SREKE+ SERDWS N R K+
Sbjct: 541 DKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDRHDKEHRYREERDGYRDYRQKE 600
Query: 1029 HDSGYDDDWDKGQXXXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
+S Y++D+D+GQ A E+DHRSRSRD +YGKRRR PSE
Sbjct: 601 RESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 327 bits (837), Expect = 3e-86
Identities = 175/358 (48%), Positives = 215/358 (60%), Gaps = 8/358 (2%)
Frame = -2
Query: 2799 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQ 2620
MD + +EQ+DY +EEY G QKMQY GGAIPALA+EE++GE VG+G LQ
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 2619 MQRSDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 2443
Q+ + PS VGN +Q K +VP ++ Q N V+ EG Y FP Q
Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120
Query: 2442 -----TSLP--GPGGPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNS 2284
+ P G G P SQ+G + E H++ G+QGS S P + D N
Sbjct: 121 DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 180
Query: 2283 EKVIGEPAPLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFV 2104
+V EPAP++ +GA +NR+M +E +RP +ENG TMLFV
Sbjct: 181 GRVANEPAPVLNPGAAGPQGALIPANQMGVNIN---VNRAMVNENQIRPPLENGGTMLFV 237
Query: 2103 GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1924
GELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH
Sbjct: 238 GELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 297
Query: 1923 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGD 1750
FNGR CVVAFA+P T+KQMGASY NK GR P+ND GRG NY SGD
Sbjct: 298 VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGD 355
Score = 224 bits (570), Expect = 2e-55
Identities = 116/220 (52%), Positives = 134/220 (60%), Gaps = 7/220 (3%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 439 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGS 498
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1177
GPH GMW D+++G W GEEHG RESSYGG+D AS+YGYGEA+H+KGARS+AASR
Sbjct: 499 SGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASR 558
Query: 1176 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDHDSGYDDD 1006
EK++ SERDWS N R +D DS YDD+
Sbjct: 559 EKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDN 618
Query: 1005 WDKGQXXXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
WD+G A+P++DHRSRSRD DYGKRRRLPSE
Sbjct: 619 WDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 326 bits (836), Expect = 3e-86
Identities = 175/358 (48%), Positives = 215/358 (60%), Gaps = 8/358 (2%)
Frame = -2
Query: 2799 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQ 2620
MD + +EQ+DY +EEY G QKMQY GGAIPALA+EE++GE VG+G LQ
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 2619 MQRSDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 2443
Q+ + PS VGN +Q K +VP ++ Q N V+ EG Y FP Q
Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120
Query: 2442 -----TSLP--GPGGPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNS 2284
+ P G G P SQ+G + E H++ G+QGS S P + D N
Sbjct: 121 DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMP 180
Query: 2283 EKVIGEPAPLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFV 2104
+V EPAP++ +GA +NR+M +E +RP +ENG TMLFV
Sbjct: 181 GRVANEPAPVLNPGAAGPQGALIPANQMGVNIN---VNRAMVNENQIRPPLENGGTMLFV 237
Query: 2103 GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1924
GELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH
Sbjct: 238 GELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 297
Query: 1923 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGD 1750
FNGR CVVAFA+P T+KQMGASY NK GR P+ND GRG NY SGD
Sbjct: 298 VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGD 355
Score = 224 bits (571), Expect = 2e-55
Identities = 116/220 (52%), Positives = 134/220 (60%), Gaps = 7/220 (3%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 439 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGS 498
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1177
GPH GMW D+++G W GEEHG RESSYGG+D AS+YGYGEA+H+KGARS+AASR
Sbjct: 499 SGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASR 558
Query: 1176 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDHDSGYDDD 1006
EK++ SERDWS N R +D DS YDD+
Sbjct: 559 EKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDN 618
Query: 1005 WDKGQXXXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
WD+G A+P++DHRSRSRD DYGKRRRLPSE
Sbjct: 619 WDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658
>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
subsp. vesca]
Length = 646
Score = 321 bits (822), Expect = 1e-84
Identities = 175/351 (49%), Positives = 219/351 (62%), Gaps = 1/351 (0%)
Frame = -2
Query: 2799 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQ 2620
MDP+ +EQ+DY +EEY G QK+QY + GAIPALA+EE + E VGEGFLQ
Sbjct: 1 MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60
Query: 2619 MQRSDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 2443
M R + +P VGN G+Q K NVP ++G A QEV N + EG Y++ P QK
Sbjct: 61 MHRPEPPLPPAGVGNGGLQAQKNNVPEQRVQGGASQEVKNPGFSVEGKYSSV----PEQK 116
Query: 2442 TSLPGPGGPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNSEKVIGEP 2263
P P A SQ+GR+ E+ H++Q G+QG+A+M AD + + K+ P
Sbjct: 117 DQPPVSVVPEMA---SQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGP 173
Query: 2262 APLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFVGELHWWT 2083
P M N G+ N+NR M +E +RP VENG+ LFVGELHWWT
Sbjct: 174 IPSM--NSGSNGPPAVQQMPANQMNMKINVNRPMVNENQIRPPVENGSATLFVGELHWWT 231
Query: 2082 TDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRAC 1903
TDAE+E VL Q+G++KEIKFFDERASGKSKGYCQV+FYDP+AASACKEGM+G+ FNGRAC
Sbjct: 232 TDAELEGVLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRAC 291
Query: 1902 VVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGD 1750
VVAFA+ T+KQMG SY NK GR P+ND AGRG N+ GD
Sbjct: 292 VVAFASSQTLKQMGDSYVNKSQGQVQTQPQGRRPMNDGAGRGGNMNFQGGD 342
Score = 192 bits (487), Expect = 1e-45
Identities = 107/221 (48%), Positives = 123/221 (55%), Gaps = 8/221 (3%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRG GYG F GP FPGMLP FPGVN+MGL GVAPHVNPAFF
Sbjct: 426 DPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAPHVNPAFFGRGMATNGMGMMGS 485
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYG-YGEASHDKGARSSAAS 1180
G H+ MWND ++ W GEE RESSYGG+D SEYG YGEA+H+K RSSAA
Sbjct: 486 SGMEGHHAPMWNDPSMAGWTGEEQDRRTRESSYGGDDGGSEYGNYGEANHEKPVRSSAAP 545
Query: 1179 REKEKNSERDW---SSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDHDSGYDD 1009
RE+E+ SER+W S R ++ D Y+D
Sbjct: 546 RERERESEREWTGTSERRHRDEREQDWDRSEREHREPRYKEEKDSYRDHRRRERDVAYED 605
Query: 1008 DWDKGQXXXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
D D+G A+PEDDHRSRSRD DYGKRRRLPSE
Sbjct: 606 DRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 646
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 319 bits (818), Expect = 4e-84
Identities = 178/358 (49%), Positives = 217/358 (60%), Gaps = 7/358 (1%)
Frame = -2
Query: 2799 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQ 2620
MD + +EQ+D+GDEEY G QKMQY GAIPALA+EEM+GE VGEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 2619 MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 2443
+QRS+ P +G++G+Q K P E Q +N V+ +G + A +P Q
Sbjct: 61 LQRSEAPPQPGGMGSTGLQAQKNEAPEPRGEAGGSQGLNIPGVSVQGKHLNVTARYPEQD 120
Query: 2442 ----TSLP--GPGGPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNSE 2281
S P G G P SQ+GR+ E ++Q G+QG +S HK D +
Sbjct: 121 GQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVPQ 180
Query: 2280 KVIGEPAPLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFVG 2101
K+ PA + + G +GA +N M E VRP +ENG TMLFVG
Sbjct: 181 KIANVPAQSLNSGTGGPQGAPHVPPNQMGLN----VNHPMISENQVRPPIENGPTMLFVG 236
Query: 2100 ELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHS 1921
ELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVEFYDP++A+ACKEGM+G+
Sbjct: 237 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYM 296
Query: 1920 FNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGDA 1747
FNGRACVVAFA+P T+KQMGASY NK GR P ND GRG NY SGDA
Sbjct: 297 FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNYQSGDA 353
Score = 205 bits (522), Expect = 9e-50
Identities = 112/220 (50%), Positives = 127/220 (57%), Gaps = 7/220 (3%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRG YG F GP FPGMLP FP VN++GL GVAPHVNPAFF
Sbjct: 435 DPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPHVNPAFFGRGMAPNGMGMMGG 494
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1177
GPH GMW DT++G WGG+EHG RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 495 PGMDGPHVGMWTDTSMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 553
Query: 1176 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDH---DSGYDDD 1006
EKE+ S+R+WS N R H D YDDD
Sbjct: 554 EKERVSDREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDD 613
Query: 1005 WDKGQXXXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
D+GQ A+PE+ RSRSRD DYGKRRRLPSE
Sbjct: 614 LDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653
>gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlisea aurea]
Length = 508
Score = 317 bits (812), Expect = 2e-83
Identities = 183/354 (51%), Positives = 216/354 (61%), Gaps = 3/354 (0%)
Frame = -2
Query: 2799 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXV-GEGFL 2623
M+P+ EQ D+G+EEY G QKMQY+QGGAIPALA+EEMIGE GE F+
Sbjct: 1 MEPMNGEQFDFGEEEYGGGQKMQYNQGGAIPALADEEMIGEEDDEYDDLYNDVNVGESFM 60
Query: 2622 QMQRSDTQVPSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 2443
Q+QR D+Q+P + + N GT E + +E N K A + A FP QK
Sbjct: 61 QVQRPDSQIPPFKAEN-----RVNPSGTGDESIPSEEANASKYAGNRAFGPGALQFPEQK 115
Query: 2442 TSLPGPGGPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNSEKVIGEP 2263
L +D SQ R NSQ SGYQGS + P+ DQ+ N +K +G+P
Sbjct: 116 AGLNTTEETSVTVDRSQTVR------NSQTDQSGYQGSVA-PNNKTEDQVKNMDKTVGDP 168
Query: 2262 APLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFVGELHWWT 2083
+ + +KGA R +DDEY S ENGNTML+VGELHWWT
Sbjct: 169 SSINPNVGVGSKGAVPFNFMNMAANANAI--RPVDDEYSNLGSSENGNTMLYVGELHWWT 226
Query: 2082 TDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRAC 1903
TDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEF+DP+AA ACKEGMNG+ FNGRAC
Sbjct: 227 TDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFFDPAAAHACKEGMNGYVFNGRAC 286
Query: 1902 VVAFATPHTIKQMGASYTNKXXXXXXXXXXGRN-PVND-AAGRGNGANYPSGDA 1747
VVAFATP TIKQMGASY N+ GRN +ND AGRG G N+ GDA
Sbjct: 287 VVAFATPQTIKQMGASYMNRNQGQPQAQFPGRNAAMNDGGAGRGVGTNFSGGDA 340
Score = 124 bits (310), Expect = 3e-25
Identities = 62/96 (64%), Positives = 69/96 (71%), Gaps = 4/96 (4%)
Frame = -2
Query: 1527 DLAFMGRGAGYGN-FSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXX 1351
DLAFMGRGAGYG F+GPAFPGMLPPFP VN++GLPGVAPHVNPAFF
Sbjct: 413 DLAFMGRGAGYGGGFTGPAFPGMLPPFPAVNTLGLPGVAPHVNPAFFGRGMAPNGMGMMG 472
Query: 1350 XXXXXGPHSGMWNDTNI-GAWGGEEHGR--ESSYGG 1252
GP+SG+WND ++ G WGGEE GR ESSYGG
Sbjct: 473 PSGMGGPYSGLWNDASVGGGWGGEEQGRGPESSYGG 508
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 316 bits (810), Expect = 4e-83
Identities = 170/355 (47%), Positives = 211/355 (59%), Gaps = 8/355 (2%)
Frame = -2
Query: 2790 VTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQMQR 2611
+ +EQ+DY ++EY G QKMQY GGAIPALA+EE++GE VG+G LQ Q+
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60
Query: 2610 SDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK--- 2443
+ PS VGN +Q K +VP ++ Q N V+ EG Y + FP Q
Sbjct: 61 PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQ 120
Query: 2442 --TSLP--GPGGPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNSEKV 2275
+ P G G P SQ+G + E H++ G+QGS S P + D N +V
Sbjct: 121 VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRV 180
Query: 2274 IGEPAPLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFVGEL 2095
EPAP++ +GA +NR M +E +RP +ENG TMLFVGEL
Sbjct: 181 ANEPAPVLNPGAAGPQGALIPANQMGVNAN---VNRVMVNENQIRPPLENGGTMLFVGEL 237
Query: 2094 HWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFN 1915
HWWTTDAE+ESVL QYG+ KEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH FN
Sbjct: 238 HWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFN 297
Query: 1914 GRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGD 1750
GR CVVAFA+P T+KQMGASY NK G P+ND GRG NY SGD
Sbjct: 298 GRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGD 352
Score = 228 bits (582), Expect = 1e-56
Identities = 119/220 (54%), Positives = 137/220 (62%), Gaps = 7/220 (3%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 436 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGS 495
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1177
GPH GMW D+++G W GEEHG RESSYGG+D AS+YGYGEA+H+KGARS+AASR
Sbjct: 496 SGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASR 555
Query: 1176 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDHDSGYDDD 1006
EK++ SERDWS N R +D DS YDD+
Sbjct: 556 EKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDN 615
Query: 1005 WDKGQ-XXXXXXXSGAVPEDDHRSRSRDADYGKRRRLPSE 889
WD+GQ SGA+P++DHRSRSRD DYGKRRRLPSE
Sbjct: 616 WDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 315 bits (807), Expect = 8e-83
Identities = 169/355 (47%), Positives = 210/355 (59%), Gaps = 8/355 (2%)
Frame = -2
Query: 2790 VTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQMQR 2611
+ +EQ+DY ++EY G QKMQY GGAIPALA+EE++GE VG+G LQ Q+
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60
Query: 2610 SDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK--- 2443
+ PS VGN +Q K +VP ++ Q N V+ EG Y + FP Q
Sbjct: 61 PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDVQ 120
Query: 2442 --TSLP--GPGGPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNSEKV 2275
+ P G G P SQ+G + E H++ G+QGS S P + D N +
Sbjct: 121 VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRA 180
Query: 2274 IGEPAPLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFVGEL 2095
EPAP++ +GA +NR M +E +RP +ENG TMLFVGEL
Sbjct: 181 ANEPAPVLNPGAAGPQGALIPANQMGVNAN---VNRVMVNENQIRPPLENGGTMLFVGEL 237
Query: 2094 HWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFN 1915
HWWTTDAE+ESVL QYG+ KEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH FN
Sbjct: 238 HWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFN 297
Query: 1914 GRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGD 1750
GR CVVAFA+P T+KQMGASY NK G P+ND GRG NY SGD
Sbjct: 298 GRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGD 352
Score = 228 bits (582), Expect = 1e-56
Identities = 119/220 (54%), Positives = 136/220 (61%), Gaps = 7/220 (3%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 436 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGS 495
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1177
GPH GMW D+++G W GEEHG RESSYGG+D AS+YGYGEASH+KGARS+ ASR
Sbjct: 496 SGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEASHEKGARSTTASR 555
Query: 1176 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDHDSGYDDD 1006
EK++ SERDWS N R +D DS YDD+
Sbjct: 556 EKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDN 615
Query: 1005 WDKGQ-XXXXXXXSGAVPEDDHRSRSRDADYGKRRRLPSE 889
WD+GQ SGA+P++DHRSRSRD DYGKRRRLPSE
Sbjct: 616 WDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 310 bits (794), Expect = 3e-81
Identities = 168/359 (46%), Positives = 217/359 (60%), Gaps = 8/359 (2%)
Frame = -2
Query: 2799 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQ 2620
MD + +EQ+D+GDEEY G QKMQY GAIPALA+EEM+GE VGEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 2619 MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 2443
+QRS+ + P +G++G++ + P +E Q +N V+ +G + +A +P +K
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119
Query: 2442 TSLPGPGGP-------PQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNS 2284
P P P SQ+G + E H+ Q G+QG S +K D
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 2283 EKVIGEPAPLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFV 2104
+K+ +PA + + G +G +N + +E V+P +ENG TMLFV
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTN----VNHPVMNENQVQPPIENGPTMLFV 235
Query: 2103 GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1924
GELHWWTTDAE+ESVL QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+
Sbjct: 236 GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295
Query: 1923 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGDA 1747
FNGRACVVAFA+P T+KQMGASY NK GR P N+ GRG NY SGDA
Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353
Score = 171 bits (433), Expect = 2e-39
Identities = 83/133 (62%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +M RG GYG F GP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 434 DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGA 493
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1177
GPH+GMW D ++G WGG+EHG RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 494 SGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552
Query: 1176 EKEKNSERDWSSN 1138
EKE+ SER+WS N
Sbjct: 553 EKERVSEREWSGN 565
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 310 bits (794), Expect = 3e-81
Identities = 168/359 (46%), Positives = 217/359 (60%), Gaps = 8/359 (2%)
Frame = -2
Query: 2799 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQ 2620
MD + +EQ+D+GDEEY G QKMQY GAIPALA+EEM+GE VGEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 2619 MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 2443
+QRS+ + P +G++G++ + P +E Q +N V+ +G + +A +P +K
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119
Query: 2442 TSLPGPGGP-------PQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNS 2284
P P P SQ+G + E H+ Q G+QG S +K D
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 2283 EKVIGEPAPLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFV 2104
+K+ +PA + + G +G +N + +E V+P +ENG TMLFV
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTN----VNHPVMNENQVQPPIENGPTMLFV 235
Query: 2103 GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1924
GELHWWTTDAE+ESVL QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+
Sbjct: 236 GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295
Query: 1923 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGDA 1747
FNGRACVVAFA+P T+KQMGASY NK GR P N+ GRG NY SGDA
Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353
Score = 194 bits (494), Expect = 2e-46
Identities = 105/215 (48%), Positives = 122/215 (56%), Gaps = 7/215 (3%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +M RG GYG F GP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 434 DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGA 493
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1177
GPH+GMW D ++G WGG+EHG RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 494 SGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552
Query: 1176 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDH---DSGYDDD 1006
EKE+ SER+WS N R H D YDDD
Sbjct: 553 EKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDD 612
Query: 1005 WDKGQXXXXXXXSG-AVPEDDHRSRSRDADYGKRR 904
WD+GQ A+PE++HRSRSRD Y + +
Sbjct: 613 WDRGQSSSRSRRRSHAMPEEEHRSRSRDVGYREEK 647
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 310 bits (794), Expect = 3e-81
Identities = 168/359 (46%), Positives = 217/359 (60%), Gaps = 8/359 (2%)
Frame = -2
Query: 2799 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQ 2620
MD + +EQ+D+GDEEY G QKMQY GAIPALA+EEM+GE VGEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 2619 MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 2443
+QRS+ + P +G++G++ + P +E Q +N V+ +G + +A +P +K
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119
Query: 2442 TSLPGPGGP-------PQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNS 2284
P P P SQ+G + E H+ Q G+QG S +K D
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 2283 EKVIGEPAPLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFV 2104
+K+ +PA + + G +G +N + +E V+P +ENG TMLFV
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTN----VNHPVMNENQVQPPIENGPTMLFV 235
Query: 2103 GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1924
GELHWWTTDAE+ESVL QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+
Sbjct: 236 GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295
Query: 1923 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGDA 1747
FNGRACVVAFA+P T+KQMGASY NK GR P N+ GRG NY SGDA
Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353
Score = 171 bits (433), Expect = 2e-39
Identities = 83/133 (62%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +M RG GYG F GP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 434 DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGA 493
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1177
GPH+GMW D ++G WGG+EHG RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 494 SGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552
Query: 1176 EKEKNSERDWSSN 1138
EKE+ SER+WS N
Sbjct: 553 EKERVSEREWSGN 565
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 310 bits (794), Expect = 3e-81
Identities = 168/359 (46%), Positives = 217/359 (60%), Gaps = 8/359 (2%)
Frame = -2
Query: 2799 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQ 2620
MD + +EQ+D+GDEEY G QKMQY GAIPALA+EEM+GE VGEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 2619 MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 2443
+QRS+ + P +G++G++ + P +E Q +N V+ +G + +A +P +K
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119
Query: 2442 TSLPGPGGP-------PQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNS 2284
P P P SQ+G + E H+ Q G+QG S +K D
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 2283 EKVIGEPAPLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFV 2104
+K+ +PA + + G +G +N + +E V+P +ENG TMLFV
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTN----VNHPVMNENQVQPPIENGPTMLFV 235
Query: 2103 GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1924
GELHWWTTDAE+ESVL QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+
Sbjct: 236 GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295
Query: 1923 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGDA 1747
FNGRACVVAFA+P T+KQMGASY NK GR P N+ GRG NY SGDA
Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353
Score = 213 bits (543), Expect = 3e-52
Identities = 114/220 (51%), Positives = 130/220 (59%), Gaps = 7/220 (3%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +M RG GYG F GP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 434 DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGA 493
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1177
GPH+GMW D ++G WGG+EHG RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 494 SGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552
Query: 1176 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDH---DSGYDDD 1006
EKE+ SER+WS N R H D YDDD
Sbjct: 553 EKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDD 612
Query: 1005 WDKGQXXXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
WD+GQ A+PE++HRSRSRD DYGK+RRLPSE
Sbjct: 613 WDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein, putative
[Ricinus communis]
Length = 644
Score = 306 bits (784), Expect = 4e-80
Identities = 176/351 (50%), Positives = 211/351 (60%), Gaps = 3/351 (0%)
Frame = -2
Query: 2790 VTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQMQR 2611
+ DEQ+DY DEEY G QK+QY GAIPALAEEEM GE +GE FLQM R
Sbjct: 1 MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNIGENFLQMHR 59
Query: 2610 SDTQ-VPSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSL 2434
S+ P VGN G Q +N +E Q +N VA E Y+ T FP Q
Sbjct: 60 SEAPPAPPSVGNGGFQPRNSN--DLRVESGGSQGLNIPGVAVESKYS-TGTHFPEQNVKG 116
Query: 2433 P--GPGGPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNSEKVIGEPA 2260
P G G P +Q+ R+ E+ ++SQA G+QGS S P D + + K+ +P
Sbjct: 117 PEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPT 176
Query: 2259 PLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFVGELHWWTT 2080
P+ N G + + NRS +E +RP +ENG+TML+VGELHWWTT
Sbjct: 177 PV--PNAGVPR--VIPQLPASQMNMNMDTNRSATNENQIRPPLENGSTMLYVGELHWWTT 232
Query: 2079 DAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACV 1900
DAE+E+VL QYG VKEIKFFDERASGKSKGYCQVEFYD +AA+ACKEGMNGH FNGRACV
Sbjct: 233 DAELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACV 292
Query: 1899 VAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGDA 1747
VAFA+ T+KQMGASY NK GR P+ND AGRG NY GDA
Sbjct: 293 VAFASQQTLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQGGDA 343
Score = 223 bits (569), Expect = 3e-55
Identities = 118/219 (53%), Positives = 136/219 (62%), Gaps = 6/219 (2%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRGAGYG F+GP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 426 DPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGRGMAPNGMGMMGP 485
Query: 1347 XXXXGPHSGMWNDTNIGAWGGE--EHGRESSYGGEDNASEYGYGEASHDKGARSSAASRE 1174
GP++GMW+DT++G WG E RESSYGG+D ASEYGYGE +H+KGARSSAASRE
Sbjct: 486 SGMDGPNAGMWSDTSMGGWGEEPGRRTRESSYGGDDGASEYGYGEVNHEKGARSSAASRE 545
Query: 1173 KEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDHDSGYDDDW 1003
KE+ SERDWS N R ++ DSGY+DDW
Sbjct: 546 KERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDHRQRERDSGYEDDW 605
Query: 1002 DKGQXXXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
D+GQ AVPE+D+RSRSRDADYGKRRRLPSE
Sbjct: 606 DRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 304 bits (778), Expect = 2e-79
Identities = 173/361 (47%), Positives = 213/361 (59%), Gaps = 13/361 (3%)
Frame = -2
Query: 2790 VTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQMQR 2611
+ +EQLDY DEEY G QKM + GGAI ALA++E++GE VGEGFLQM R
Sbjct: 1 MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60
Query: 2610 SDTQVPS-VVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYA------------A 2470
S+ PS V+ Q K +VP LE Q + V+ EG Y+ A
Sbjct: 61 SEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMA 120
Query: 2469 TAAPFPVQKTSLPGPGGPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMN 2290
P + L GP SQ+GR+ E+ H++Q G+QGS +P K A+ +
Sbjct: 121 VKGPEMGSTSHLDGPS-------VSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSD 173
Query: 2289 NSEKVIGEPAPLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTML 2110
K+ E P++ + G + +NR M +E +RP+V+NG TML
Sbjct: 174 VHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVN--VNRPMVNENQIRPAVDNGATML 231
Query: 2109 FVGELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMN 1930
FVGELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVEFYD SAA+ACKEGMN
Sbjct: 232 FVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMN 291
Query: 1929 GHSFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGD 1750
G+ FNGRACVVAFA+P T+KQMGASY NK GR P+ND GRG G N GD
Sbjct: 292 GYIFNGRACVVAFASPQTLKQMGASYMNK--TQAQSQSQGRRPMNDGVGRGGGMNMQGGD 349
Query: 1749 A 1747
A
Sbjct: 350 A 350
Score = 213 bits (543), Expect = 3e-52
Identities = 110/217 (50%), Positives = 128/217 (58%), Gaps = 4/217 (1%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRG YG FSG AFPGM+P FP VN+MGL GVAPHVNPAFF
Sbjct: 431 DPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGMAANGMGMMGA 490
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1177
G H+GMW DT++G WGGEEHG RESSYGG+D AS+YGYGE +H+K RS+ ASR
Sbjct: 491 TGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTASR 550
Query: 1176 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDHDSGYDDDWDK 997
EKE+ SERDWS N R ++ D +DDWD+
Sbjct: 551 EKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDR 610
Query: 996 GQXXXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
GQ AV ++DHRSRSRD DYGKRRRLPSE
Sbjct: 611 GQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 647
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 295 bits (754), Expect = 1e-76
Identities = 169/348 (48%), Positives = 207/348 (59%), Gaps = 1/348 (0%)
Frame = -2
Query: 2790 VTDEQLDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQMQR 2611
+ +EQ+DY DEEY G QK+QY GAI ALA+EE + E V EGFLQM R
Sbjct: 1 MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60
Query: 2610 SDTQVP-SVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSL 2434
S+ +P VGN G+Q K +V T ++ QE V+ +G Y++ A FP Q+
Sbjct: 61 SEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQ--- 117
Query: 2433 PGPGGPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNSEKVIGEPAPL 2254
G PP VA + G +GY GS +MP D + + K E P
Sbjct: 118 ---GQPP-------------VAKEPELGSTGY-GSTTMPPNVGGDSSDITGKTALESVPS 160
Query: 2253 MYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFVGELHWWTTDA 2074
M N G N NR M +E +RP VENG+TMLFVGELHWWTTDA
Sbjct: 161 M--NSGTAGPTGVTQMPTNQISIKVNANRPMFNENQIRPPVENGSTMLFVGELHWWTTDA 218
Query: 2073 EIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVA 1894
E+ESVL QYG+VKEIKFFDERASGKSKGYCQVEF+DP+AA+ACKEGM+G+ FNGRACVVA
Sbjct: 219 ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRACVVA 278
Query: 1893 FATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGD 1750
FA+P T+KQMGASY +K GR P+N+ GRG G NY +GD
Sbjct: 279 FASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNEGVGRGGGVNYQTGD 326
Score = 223 bits (568), Expect = 4e-55
Identities = 116/221 (52%), Positives = 133/221 (60%), Gaps = 8/221 (3%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRG GYG F GPAFPGML FP VN+MGL GVAPHVNPAFF
Sbjct: 410 DPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGS 469
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1177
G H+GMWND ++G WGG+EHG RESSYGG+D ASEYGYGEA+H+KG RS+A SR
Sbjct: 470 SGMDGHHAGMWNDPSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAPSR 529
Query: 1176 EKEKNSERDWSSNP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDHDSGYDD 1009
E+E+ SERDWS N R ++ D GY+D
Sbjct: 530 ERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYED 589
Query: 1008 DWDKGQXXXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
DWD+GQ A+PEDDHRSRSRD DYGKRRRLPSE
Sbjct: 590 DWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 630
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 287 bits (735), Expect = 2e-74
Identities = 163/357 (45%), Positives = 210/357 (58%), Gaps = 10/357 (2%)
Frame = -2
Query: 2790 VTDEQLDYGDEEYAGNQKMQYH-QGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQMQ 2614
+ ++ +D+ DEEY G QK QY GGAI ALA+EE++G+ VGEGFLQ+Q
Sbjct: 1 MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60
Query: 2613 RSDT-QVPSVVG-NSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFP---- 2452
RS+ +P+ G +G+Q K N P E Q+ N V+ EG +++ + FP
Sbjct: 61 RSEAPSLPAAAGVGNGLQAQKRNFPEPREEIGGSQQPNIPGVSAEGRFSSAGSQFPGQQD 120
Query: 2451 ---VQKTSLPGPGGPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNSE 2281
V K S G P SQ+GR+ +G+QGS M H D +
Sbjct: 121 GLKVDKKSEAGSMVYPDGASGSQKGRI----------VAGFQGSKPMLHSVGVDSSDIPG 170
Query: 2280 KVIGEPAPLMYTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFVG 2101
K++ EP + N G N++ + +E +RPS+ENG+TMLFVG
Sbjct: 171 KMVNEP--IQAPNSGGAGPRGILPMQGNQTTVNANVSHPIVNENQIRPSIENGSTMLFVG 228
Query: 2100 ELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHS 1921
ELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVE+YD +AA ACKEGM+GH
Sbjct: 229 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGMHGHV 288
Query: 1920 FNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGD 1750
FNGRACVVAFA+P T+KQMGA+Y +K GR P+ND GRG N+ SGD
Sbjct: 289 FNGRACVVAFASPQTLKQMGAAYMSKNQVQNQSQPQGRRPINDGVGRGGNPNFQSGD 345
Score = 194 bits (492), Expect = 3e-46
Identities = 106/220 (48%), Positives = 119/220 (54%), Gaps = 7/220 (3%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRG GYG F+GPAFPGMLP FP VN+MG VAPHVNPAFF
Sbjct: 425 DPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTMGFAAVAPHVNPAFFGRGMTNNGMGMVGS 484
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1177
G GMWND +IG WGGEEHG RESSYGG+D ASEYGYG+ +H+KG R
Sbjct: 485 SLMDGHQGGMWNDPSIGGWGGEEHGRRTRESSYGGDDGASEYGYGDTNHEKGGR------ 538
Query: 1176 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRS---KDHDSGYDDD 1006
E+ SERDWS N R K+ + Y+DD
Sbjct: 539 --ERGSERDWSGNSERRNHEERDQDWDRSQKEQKEHRYREGKDGSRDYRPKERELDYEDD 596
Query: 1005 WDKGQXXXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
WD+GQ V ED HRSRSRD DYGKRRRLPSE
Sbjct: 597 WDRGQSSSRLRSRSRVVQEDHHRSRSRDVDYGKRRRLPSE 636
>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222852472|gb|EEE90019.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 619
Score = 279 bits (713), Expect = 6e-72
Identities = 163/347 (46%), Positives = 197/347 (56%), Gaps = 5/347 (1%)
Frame = -2
Query: 2775 LDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQMQRSDTQV 2596
+DY +EE KMQY GAIPALAEEEM GE VGE FLQM S+
Sbjct: 1 MDYEEEE-----KMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHGSEAPA 54
Query: 2595 P-SVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSLPGPG- 2422
P + VGN G Q A+ G + A EG Y+ A FP QK
Sbjct: 55 PPATVGNGGFQTRNAHESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEA 114
Query: 2421 ---GPPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNSEKVIGEPAPLM 2251
GP +Q+GR+ E++H+ Q G+Q S +P D + S K EP PL
Sbjct: 115 QDVGPVDGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLP 174
Query: 2250 YTNMGNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFVGELHWWTTDAE 2071
T +GA +NR + +E VRP +ENG+T L+VGELHWWTTDAE
Sbjct: 175 ITGSAGPRGAPQMQVNQMHMSAD--VNRPVVNENQVRPPIENGSTTLYVGELHWWTTDAE 232
Query: 2070 IESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAF 1891
+ES Q+G+VKEIKFFDERASGKSKGYCQV+FY+ +AA+ACKEGMNGH FNGR CVVAF
Sbjct: 233 LESFASQFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAF 292
Query: 1890 ATPHTIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGD 1750
A+P T+KQMGASY NK GR +ND AGRG AN+ SGD
Sbjct: 293 ASPQTLKQMGASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANFQSGD 339
Score = 189 bits (480), Expect = 6e-45
Identities = 103/214 (48%), Positives = 118/214 (55%), Gaps = 1/214 (0%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRG GYG F+GP FPGMLP FP VNSMGL GVAPHVNPAFF
Sbjct: 421 DPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMVS 480
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHGRESSYGGEDNASEYGYGEASHDKGARSSAASREKE 1168
GP+ GMW ESSY G++ ASEYGYGE +H+KGARSS ASREKE
Sbjct: 481 SGMDGPNPGMW---------------ESSYDGDEGASEYGYGEGNHEKGARSSGASREKE 525
Query: 1167 KNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDHDSGYDDDWDKGQX 988
+ SERDWS N R ++ DSGY+DD D+G
Sbjct: 526 RGSERDWSGNSDRRHRDEREQDWDRPEREHRYKEEKDSYRGHRQRERDSGYEDDRDRGHS 585
Query: 987 XXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
A PE+D+RSR+RD DYGKRRRLPSE
Sbjct: 586 SSRARSRSRAAPEEDYRSRTRDVDYGKRRRLPSE 619
>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
gi|550329195|gb|ERP56065.1| hypothetical protein
POPTR_0010s06150g [Populus trichocarpa]
Length = 591
Score = 242 bits (618), Expect = 6e-61
Identities = 149/343 (43%), Positives = 180/343 (52%), Gaps = 1/343 (0%)
Frame = -2
Query: 2775 LDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQMQRSDTQV 2596
+D+ +EE KMQY GAIPALAEEE+ GE VGE FLQM S+
Sbjct: 1 MDFEEEE-----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPA 54
Query: 2595 P-SVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSLPGPGG 2419
P + GN G Q A+ G + + VA EG Y+ A FP QK + G
Sbjct: 55 PPATAGNGGFQTRNAHESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIG--- 111
Query: 2418 PPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNSEKVIGEPAPLMYTNM 2239
+ G GY +S+ K +A P M N
Sbjct: 112 ----------------VEANDVGSIGYGDGSSVAQKGSAGPRG---------VPQMQVNQ 146
Query: 2238 GNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFVGELHWWTTDAEIESV 2059
N ++NR + +E VRP +ENG T L+VGELHWWTTDAE+ESV
Sbjct: 147 MNMNA---------------DVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESV 191
Query: 2058 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 1879
QYG+VKEIKFFDERASGKSKGYCQV+FY+ +AA+ACKEGMN H FNGR CVVAFA+
Sbjct: 192 ASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQ 251
Query: 1878 TIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGD 1750
T+KQMGASY +K GR +ND GRG ANY SGD
Sbjct: 252 TLKQMGASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANYQSGD 294
Score = 200 bits (509), Expect = 3e-48
Identities = 108/216 (50%), Positives = 123/216 (56%), Gaps = 3/216 (1%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRG GYG F G FPGMLP FP VNSMGL GVAPHVNPAFF
Sbjct: 376 DPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMAS 435
Query: 1347 XXXXGPHSGMWNDTNIGAWGGE--EHGRESSYGGEDNASEYGYGEASHDKGARSSAASRE 1174
GP+ G W DT++G WG E RESSY G++ ASEYGYGE +H+KGARSS ASRE
Sbjct: 436 SGMEGPNPGKWPDTSMGGWGEEPGRRTRESSYDGDEGASEYGYGEGNHEKGARSSGASRE 495
Query: 1173 KEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDHDSGYDDDWDKG 994
KE+ SERDWS N R ++ DSGY+DD D+G
Sbjct: 496 KERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQRERDSGYEDDRDRG 555
Query: 993 QXXXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
A PE+D+RSRSRD DYGKRRR PSE
Sbjct: 556 HSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPPSE 591
>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222864687|gb|EEF01818.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 573
Score = 242 bits (618), Expect = 6e-61
Identities = 149/343 (43%), Positives = 180/343 (52%), Gaps = 1/343 (0%)
Frame = -2
Query: 2775 LDYGDEEYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXVGEGFLQMQRSDTQV 2596
+D+ +EE KMQY GAIPALAEEE+ GE VGE FLQM S+
Sbjct: 1 MDFEEEE-----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPA 54
Query: 2595 P-SVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSLPGPGG 2419
P + GN G Q A+ G + + VA EG Y+ A FP QK + G
Sbjct: 55 PPATAGNGGFQTRNAHESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIG--- 111
Query: 2418 PPQAMDASQRGRLPEVAHNSQAGYSGYQGSASMPHKNAADQMNNSEKVIGEPAPLMYTNM 2239
+ G GY +S+ K +A P M N
Sbjct: 112 ----------------VEANDVGSIGYGDGSSVAQKGSAGPRG---------VPQMQVNQ 146
Query: 2238 GNTKGAXXXXXXXXXXXXXXNINRSMDDEYMVRPSVENGNTMLFVGELHWWTTDAEIESV 2059
N ++NR + +E VRP +ENG T L+VGELHWWTTDAE+ESV
Sbjct: 147 MNMNA---------------DVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESV 191
Query: 2058 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 1879
QYG+VKEIKFFDERASGKSKGYCQV+FY+ +AA+ACKEGMN H FNGR CVVAFA+
Sbjct: 192 ASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQ 251
Query: 1878 TIKQMGASYTNKXXXXXXXXXXGRNPVNDAAGRGNGANYPSGD 1750
T+KQMGASY +K GR +ND GRG ANY SGD
Sbjct: 252 TLKQMGASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANYQSGD 294
Score = 178 bits (452), Expect = 1e-41
Identities = 102/214 (47%), Positives = 117/214 (54%), Gaps = 1/214 (0%)
Frame = -2
Query: 1527 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1348
D +MGRG GYG F G FPGMLP FP VNSMGL GVAPHVNPAFF
Sbjct: 376 DPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAP-------- 427
Query: 1347 XXXXGPHSGMWNDTNIGAWGGEEHGRESSYGGEDNASEYGYGEASHDKGARSSAASREKE 1168
+GM + G G G+ESSY G++ ASEYGYGE +H+KGARSS ASREKE
Sbjct: 428 -------NGMGMMASSG-MEGPNPGKESSYDGDEGASEYGYGEGNHEKGARSSGASREKE 479
Query: 1167 KNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKDHDSGYDDDWDKGQX 988
+ SERDWS N R ++ DSGY+DD D+G
Sbjct: 480 RVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQRERDSGYEDDRDRGHS 539
Query: 987 XXXXXXSG-AVPEDDHRSRSRDADYGKRRRLPSE 889
A PE+D+RSRSRD DYGKRRR PSE
Sbjct: 540 SSRARSRSRAAPEEDYRSRSRDVDYGKRRRPPSE 573