BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00004741
         (3001 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]   369   e-154
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]   369   e-152
emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera]   353   e-149
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   327   e-137
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]   333   e-135
emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]   352   e-131
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   295   e-130
gb|AAB82754.1| retrofit [Oryza longistaminata]                        301   e-129
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  301   e-129
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   295   e-127
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   276   e-126
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...   288   e-126
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   293   e-126
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]   274   e-126
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   288   e-125
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   294   e-125
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   293   e-125
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   283   e-124
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   290   e-124
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   287   e-123

>emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]
          Length = 1379

 Score =  369 bits (947), Expect(2) = e-154
 Identities = 186/308 (60%), Positives = 230/308 (74%), Gaps = 2/308 (0%)
 Frame = +2

Query: 1895 VIAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADT 2074
            ++ + VYM QP G++D   P HVC+LK ALYGL+QAP AW+QRF  FL+  GF CS ADT
Sbjct: 395  ILHETVYMEQPLGYVDPRHPLHVCKLKKALYGLKQAPRAWFQRFSSFLLKLGFFCSRADT 454

Query: 2075 SLFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSY 2254
            SLF+F +                TGN+P  I+  ++++ SEFA+KDLG L YFLGLEVSY
Sbjct: 455  SLFVFTKKDDLIYLLLYVDDIILTGNNPALINRFISQLHSEFAVKDLGPLSYFLGLEVSY 514

Query: 2255 SSAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRADGSPFSDLTLYRSLVGALQY 2434
               G FL Q KYA DIL RA L  SKPV TP+  +    ++G+PF+D TLYRSLVGALQY
Sbjct: 515  IPDGFFLSQVKYATDILARAQLLDSKPVPTPMIVSQRLSSEGTPFADPTLYRSLVGALQY 574

Query: 2435 LIITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTK-SSTTVLGYSD 2608
            L ITRP+L++ +N+VSQF   PT+ HFQAVKRILRYV+GTL FG+ FT  SS  ++ YSD
Sbjct: 575  LTITRPNLAHSINSVSQFLHAPTEVHFQAVKRILRYVQGTLHFGLKFTSCSSMGLVAYSD 634

Query: 2609 ADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLTNL 2788
            ADWA C DTRRST GYSIFLG+NLVSWSAKKQPTV+RSSCESEYRA+A TA++++WLT+L
Sbjct: 635  ADWAGCPDTRRSTSGYSIFLGNNLVSWSAKKQPTVSRSSCESEYRALALTAAKVLWLTHL 694

Query: 2789 LKELHVVL 2812
            L++L V L
Sbjct: 695  LRDLRVTL 702



 Score =  207 bits (528), Expect(2) = e-154
 Identities = 100/161 (62%), Positives = 129/161 (80%)
 Frame = +1

Query: 1435 HPMRTRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLA 1614
            HPM TR++SGI+KP++PA L+  QS+PL  AL+ TSEPKG KSA K+  W+ AM++++ A
Sbjct: 241  HPMITRAKSGIFKPRHPAHLSFVQSSPLIHALLATSEPKGFKSAAKNPAWLAAMDDKIKA 300

Query: 1615 LKRNNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFS 1794
            L+ N+TW+LVPRP   NIVGSKWVFRTK L+ GS++R KARLVA+G++QLPG D+  TFS
Sbjct: 301  LQTNHTWDLVPRPSNTNIVGSKWVFRTKFLSYGSIERFKARLVAKGYTQLPGLDYKDTFS 360

Query: 1795 PVVKATTVRVVLALAIMNSWSLHQLDVKNAFLNGYC*TCIY 1917
            PVVKA+TVRVVL+LA+ + W L QLDVKNAFLNG     +Y
Sbjct: 361  PVVKASTVRVVLSLAVSHKWPLRQLDVKNAFLNGILHETVY 401



 Score =  207 bits (526), Expect = 3e-50
 Identities = 92/134 (68%), Positives = 110/134 (82%)
 Frame = +3

Query: 720  MSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSFWVEAFSTAAFIINRVPSTLLKNK 899
            MSCP+TP+QNGRAERKHRH+TETGLA+LFHS VP  +WV+AFSTA +IINR+P  +L   
Sbjct: 1    MSCPYTPSQNGRAERKHRHVTETGLALLFHSHVPPQYWVDAFSTATYIINRLPLPVLGGL 60

Query: 900  SPFELLYGSIPAYGDFRIFGCRVYPCLRDYAASKFSPRSLACVFLGISSVHKGYKCYDPA 1079
            SPFE+L+G  P Y +F  FGCRVYPCLRDYA  KFSPRSL C+FLG SS HKG++C+D  
Sbjct: 61   SPFEVLFGKSPNYENFHPFGCRVYPCLRDYAPHKFSPRSLPCIFLGYSSSHKGFRCFDTT 120

Query: 1080 SGRIYITRHAKFDE 1121
            + R YITRHA+FDE
Sbjct: 121  TSRTYITRHARFDE 134



 Score = 94.0 bits (232), Expect = 4e-16
 Identities = 48/93 (51%), Positives = 62/93 (66%)
 Frame = +3

Query: 2721 LAVNRSTVPWLTQLLKLFGSPIYSRNFMSSCLDQPPVLLCDNRSAIFLSQNPVSHKRAKH 2900
            LA+  + V WLT LL+           +   L   P+LLCDN+SAIFLS NPVSHKRAKH
Sbjct: 681  LALTAAKVLWLTHLLR----------DLRVTLTHRPLLLCDNKSAIFLSSNPVSHKRAKH 730

Query: 2901 IDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            +D+DYHF+ EL+    L+ Q +PS +Q+ADVFT
Sbjct: 731  VDLDYHFLRELIVAGTLRIQHIPSHLQLADVFT 763


>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
          Length = 1239

 Score =  369 bits (948), Expect(2) = e-152
 Identities = 189/309 (61%), Positives = 227/309 (73%), Gaps = 3/309 (0%)
 Frame = +2

Query: 1898 IAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTS 2077
            + + VYM QPPG+ID   P HVC LK ALYGL+QAP AW+QRF  FL+  GF+CS ADTS
Sbjct: 825  LTEHVYMEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTS 884

Query: 2078 LFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYS 2257
            LF+F + S              TGN+P  + S   ++ SEFA KDLG L YFLGLE S +
Sbjct: 885  LFVFHQQSSLIYLLLYVDDIIVTGNNPSLLDSFTRKLHSEFATKDLGSLSYFLGLEASPT 944

Query: 2258 SAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRADGSPFSDLTLYRSLVGALQYL 2437
              GLF+ Q KYARDIL RA L  SKPV TP+  +      GSPFS+ TLYRSLVGALQYL
Sbjct: 945  PDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTVAGSPFSNPTLYRSLVGALQYL 1004

Query: 2438 IITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKSS--TTVLGYSD 2608
             ITRPD+++ VN+VSQF   PT DHF AVKRILRYVKGTL FG++F  S+  + ++ YSD
Sbjct: 1005 TITRPDIAHAVNSVSQFLHAPTIDHFLAVKRILRYVKGTLHFGLTFRPSTIPSALVAYSD 1064

Query: 2609 ADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLTNL 2788
            ADWA C DTRRST GYSI+LG+NLVSWSAKKQPTV+RSSCESEYRA+A TA+E++WLT+L
Sbjct: 1065 ADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALAMTAAELLWLTHL 1124

Query: 2789 LKELHVVLP 2815
            L +L V +P
Sbjct: 1125 LHDLKVPIP 1133



 Score =  199 bits (507), Expect(2) = e-152
 Identities = 97/154 (62%), Positives = 124/154 (80%)
 Frame = +1

Query: 1435 HPMRTRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLA 1614
            HPM TR+++GI+K ++PA+L +  S+ L  AL+ ++EPKG KSA K+  W+ AM+EE+ A
Sbjct: 670  HPMITRAKAGIFKTRHPANLGVLGSSGLLSALLSSTEPKGFKSAAKNPAWLAAMDEEVQA 729

Query: 1615 LKRNNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFS 1794
            L++N TW LVPRP   NIVGSKWVFRTK   DGS++R KARLVA+G++Q+PG D+T TFS
Sbjct: 730  LQQNGTWILVPRPVNTNIVGSKWVFRTKYFPDGSVERLKARLVAKGYTQVPGLDYTDTFS 789

Query: 1795 PVVKATTVRVVLALAIMNSWSLHQLDVKNAFLNG 1896
            PVVKATTVRVVL+LA+ N W L QLDVKNAFLNG
Sbjct: 790  PVVKATTVRVVLSLAVTNKWPLRQLDVKNAFLNG 823



 Score =  161 bits (407), Expect = 2e-36
 Identities = 73/121 (60%), Positives = 90/121 (74%)
 Frame = +3

Query: 483 VMSNSVFKYYAIFVDDFSRFVWFYPMHAKSEFYDIFVRFQKFVETQFSAKIRTFQSDGGT 662
           + SNS F YY IF+DD+SRF W YP+  KS+F+DIF++FQKFVE Q SA+I+ FQSDGG 
Sbjct: 500 IKSNSGFLYYVIFIDDYSRFTWLYPLKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGGA 559

Query: 663 EFRSNKLQTLFVECGIQHIMSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSFWVEA 842
           EF +   +      GI H +SCP+T AQNGRAERKHRH+TETGLA+LFH  +   FWVE 
Sbjct: 560 EFTNTCFKAHLRTSGIHHQLSCPYTXAQNGRAERKHRHVTETGLALLFHXHLSPRFWVER 619

Query: 843 F 845
           F
Sbjct: 620 F 620



 Score = 97.1 bits (240), Expect = 4e-17
 Identities = 49/93 (52%), Positives = 65/93 (69%)
 Frame = +3

Query: 2721 LAVNRSTVPWLTQLLKLFGSPIYSRNFMSSCLDQPPVLLCDNRSAIFLSQNPVSHKRAKH 2900
            LA+  + + WLT LL     PI  +          P+LLCDN+SAIFLS NPVSHKRAKH
Sbjct: 1111 LAMTAAELLWLTHLLHDLKVPIPXQ----------PLLLCDNKSAIFLSSNPVSHKRAKH 1160

Query: 2901 IDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            +++DYHF+ ELV   +L+T++VPS +QVAD+FT
Sbjct: 1161 VELDYHFLRELVVAGKLRTEYVPSHLQVADIFT 1193


>emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera]
          Length = 1095

 Score =  353 bits (905), Expect(2) = e-149
 Identities = 179/307 (58%), Positives = 222/307 (72%), Gaps = 1/307 (0%)
 Frame = +2

Query: 1895 VIAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADT 2074
            ++ + VYM QPPG++D   P HVC+LK ALYGL+QAP AW+QRF  FL+  GF C+ ADT
Sbjct: 698  ILHETVYMEQPPGYVDPRHPLHVCKLKKALYGLKQAPRAWFQRFSSFLLKLGFFCNCADT 757

Query: 2075 SLFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSY 2254
            SLF+F +                TGN+P  I+  ++++ SEFA+KDLG L YFLGLEVSY
Sbjct: 758  SLFVFTKKDDLIYLLLYVDNIILTGNNPALINQFISQLHSEFAVKDLGPLSYFLGLEVSY 817

Query: 2255 SSAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRADGSPFSDLTLYRSLVGALQY 2434
               G FL Q KYA DIL RA L  SKPV+TP+  +    ++G+PF+D TLYRSLVGALQY
Sbjct: 818  IPDGFFLSQVKYATDILARAQLLDSKPVTTPMIVSQRLSSEGTPFADPTLYRSLVGALQY 877

Query: 2435 LIITRPDLSYVVNTVSQFQRPTDDHFQAVKRILRYVKGTLDFGISFTK-SSTTVLGYSDA 2611
            L ITRPD+++ VN+             AVKRILRYV+GTL FG+ FT  SS  ++ YSDA
Sbjct: 878  LTITRPDIAHSVNS-------------AVKRILRYVQGTLHFGLKFTSCSSMGLVAYSDA 924

Query: 2612 DWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLTNLL 2791
            DWA C DTRRST GYSIFLG+NLVSWSAKKQPTV+RSSCESEYRA+A TA+E++WLT+LL
Sbjct: 925  DWAGCPDTRRSTSGYSIFLGNNLVSWSAKKQPTVSRSSCESEYRALALTAAEVLWLTHLL 984

Query: 2792 KELHVVL 2812
            ++L V L
Sbjct: 985  RDLRVTL 991



 Score =  205 bits (522), Expect(2) = e-149
 Identities = 98/161 (60%), Positives = 126/161 (78%)
 Frame = +1

Query: 1435 HPMRTRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLA 1614
            HPM TR++SGI+KP++P  L+  QS+PL  AL+ T EPKG KSA K+  W+  M++E+ A
Sbjct: 544  HPMITRAKSGIFKPQHPVHLSFVQSSPLIHALLATFEPKGFKSAAKNPAWLATMDDEIKA 603

Query: 1615 LKRNNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFS 1794
            L+ N+TW+LVPRP   NIVGSKWVFRTK L+DGS++R KARLVA+G++QLPG D+  TFS
Sbjct: 604  LQTNHTWDLVPRPSNTNIVGSKWVFRTKFLSDGSIERFKARLVAKGYTQLPGLDYKDTFS 663

Query: 1795 PVVKATTVRVVLALAIMNSWSLHQLDVKNAFLNGYC*TCIY 1917
            PVVKA+TVRVVL+LA+ + W L QLDVKN FLNG     +Y
Sbjct: 664  PVVKASTVRVVLSLAVSHKWPLRQLDVKNVFLNGILHETVY 704



 Score = 93.6 bits (231), Expect = 5e-16
 Identities = 49/93 (52%), Positives = 61/93 (65%)
 Frame = +3

Query: 2721 LAVNRSTVPWLTQLLKLFGSPIYSRNFMSSCLDQPPVLLCDNRSAIFLSQNPVSHKRAKH 2900
            LA+  + V WLT LL+           +   L   P+LLCDN SAIFLS NPVSHKRAKH
Sbjct: 970  LALTAAEVLWLTHLLR----------DLRVTLTHRPLLLCDNNSAIFLSSNPVSHKRAKH 1019

Query: 2901 IDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            ID+DYHF+ EL+    L+ Q +PS +Q+ADVFT
Sbjct: 1020 IDLDYHFLRELIVAGTLRLQHIPSHLQLADVFT 1052


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  327 bits (839), Expect(2) = e-137
 Identities = 165/303 (54%), Positives = 208/303 (68%), Gaps = 2/303 (0%)
 Frame = +2

Query: 1910 VYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTSLFIF 2089
            VYM QPPG+ D   P HVCRLK ALYGL+QAP AW+ RF  FL+  GF  S AD+SLF +
Sbjct: 962  VYMEQPPGYTDPQFPQHVCRLKRALYGLKQAPRAWFHRFSSFLLKHGFHSSQADSSLFFY 1021

Query: 2090 RRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYSSAGL 2269
                              TG+ P  + + + R+ +EF++KDLG L YFLG+EV  +  GL
Sbjct: 1022 HSSLGTVYLLLYVDDMIITGSTPSLVHTFITRLSNEFSMKDLGDLHYFLGVEVQANEKGL 1081

Query: 2270 FLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRADGSPFSDLTLYRSLVGALQYLIITR 2449
            FL Q KYA D+L RA +  +KP+STP        A+G+ FSD TL+RSL GALQYL ITR
Sbjct: 1082 FLSQTKYALDLLQRASMIDAKPISTPFVVGQHLSAEGTLFSDPTLFRSLAGALQYLTITR 1141

Query: 2450 PDLSYVVNTVSQFQR-PTDDHFQAVKRILRYVKGTLDFGISFTKSST-TVLGYSDADWAR 2623
            PDLS+ VN++ QF   PT+DHF+A+KRILRYVKGT   G+   K ST  +LGYSDADWA 
Sbjct: 1142 PDLSFSVNSIFQFMHAPTEDHFRALKRILRYVKGTAHHGLQLHKQSTRDLLGYSDADWAG 1201

Query: 2624 CLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLTNLLKELH 2803
            C DTRRST GY+IF G NL+SWS+KKQ TV+RSS E+EYR++A   ++I W+  LL++LH
Sbjct: 1202 CPDTRRSTTGYAIFFGANLISWSSKKQSTVSRSSAEAEYRSLAVATADIAWIIQLLRDLH 1261

Query: 2804 VVL 2812
            V L
Sbjct: 1262 VTL 1264



 Score =  191 bits (485), Expect(2) = e-137
 Identities = 87/155 (56%), Positives = 120/155 (77%)
 Frame = +1

Query: 1435 HPMRTRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLA 1614
            HPM TR ++GI+KP+    + +  S+ L+ A +   EP+G KSA KH  W++AM++E+ A
Sbjct: 803  HPMITRGKAGIFKPRLYHAMHISSSSQLFQAFLALKEPRGFKSAAKHPEWLSAMDDEIHA 862

Query: 1615 LKRNNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFS 1794
            LK+N+TW LVPRP   N+VG +W+F+TKL +DGS++RHKARLVAQGFSQ+ G DF  TFS
Sbjct: 863  LKKNDTWVLVPRPQHHNVVGCRWIFKTKLHSDGSIERHKARLVAQGFSQVHGLDFGDTFS 922

Query: 1795 PVVKATTVRVVLALAIMNSWSLHQLDVKNAFLNGY 1899
            PVV+  TVR++L+LA+ + W LHQLDVKNAFL+G+
Sbjct: 923  PVVRPATVRIILSLAVTSGWRLHQLDVKNAFLHGF 957



 Score =  190 bits (483), Expect = 3e-45
 Identities = 84/157 (53%), Positives = 114/157 (72%)
 Frame = +3

Query: 651  DGGTEFRSNKLQTLFVECGIQHIMSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSF 830
            DGGTEF +NK ++    CGI   ++CP+TP+QNG  ERKHR++TE GL ++FH+ VPLS 
Sbjct: 545  DGGTEFTNNKFRSHLHSCGIDLRLACPYTPSQNGIVERKHRYVTEIGLTLMFHARVPLSL 604

Query: 831  WVEAFSTAAFIINRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDYAASKFSP 1010
            W EAFSTA F+INR+P   L  K+P+ELL+G  P Y   R FGC  +P LRDY+ +K SP
Sbjct: 605  WDEAFSTAVFLINRLPPPSLAGKTPYELLFGKQPDYSMLRTFGCLCFPYLRDYSPNKLSP 664

Query: 1011 RSLACVFLGISSVHKGYKCYDPASGRIYITRHAKFDE 1121
            +S  CVFLG S++HKG++C D  + R+Y++RH +F E
Sbjct: 665  KSTPCVFLGYSTLHKGFRCLDRKTHRVYVSRHVQFYE 701



 Score = 85.5 bits (210), Expect = 1e-13
 Identities = 45/93 (48%), Positives = 59/93 (63%)
 Frame = +3

Query: 2721 LAVNRSTVPWLTQLLKLFGSPIYSRNFMSSCLDQPPVLLCDNRSAIFLSQNPVSHKRAKH 2900
            LAV  + + W+ QLL+           +   L  PP +LCDN+SAIF++ NPV+  R+KH
Sbjct: 1243 LAVATADIAWIIQLLR----------DLHVTLSVPPKILCDNQSAIFMAVNPVTRPRSKH 1292

Query: 2901 IDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            I IDYHFV ELVD+  LK  FVPS +Q+AD  T
Sbjct: 1293 IAIDYHFVRELVDKGTLKIDFVPSHLQLADSLT 1325


>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
          Length = 1453

 Score =  333 bits (854), Expect(2) = e-135
 Identities = 175/308 (56%), Positives = 214/308 (69%), Gaps = 2/308 (0%)
 Frame = +2

Query: 1895 VIAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADT 2074
            ++ + VYM QPPG++D   P HVC+LK ALY L+QAP AW+QRF  FL+  GF CS A T
Sbjct: 942  ILHETVYMEQPPGYVDPRHPLHVCKLKKALYDLKQAPRAWFQRFSSFLLKLGFFCSRAYT 1001

Query: 2075 SLFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSY 2254
            SLF+F                  TGN+P  I+  ++++ SEFA+KDLG L YFLGLEVSY
Sbjct: 1002 SLFVFTMKDDLIYLLLYVDDIILTGNNPTLINRFISQLHSEFAVKDLGPLSYFLGLEVSY 1061

Query: 2255 SSAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRADGSPFSDLTLYRSLVGALQY 2434
               G FL Q KYA DIL RA L  SKPV TP+  +    ++G+PF+D TLYRSLVGALQY
Sbjct: 1062 IPDGFFLSQVKYATDILARAQLLDSKPVPTPMIVSQRLSSEGTPFADPTLYRSLVGALQY 1121

Query: 2435 LIITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTK-SSTTVLGYSD 2608
            L IT PDL++ VN+VSQF   PT+ HFQAVKRILRYV+GTL FG+ FT  SS  ++ YSD
Sbjct: 1122 LTITCPDLAHSVNSVSQFLHAPTEVHFQAVKRILRYVQGTLHFGLKFTSCSSMGLVAYSD 1181

Query: 2609 ADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLTNL 2788
             DWA C DTRRST GY            AKKQPTV+RSSCESEYRA+A TA+E++WLT+L
Sbjct: 1182 EDWAGCPDTRRSTSGY------------AKKQPTVSRSSCESEYRALALTAAEVLWLTHL 1229

Query: 2789 LKELHVVL 2812
            L++L V L
Sbjct: 1230 LRDLRVTL 1237



 Score =  179 bits (455), Expect(2) = e-135
 Identities = 90/161 (55%), Positives = 118/161 (73%)
 Frame = +1

Query: 1435 HPMRTRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLA 1614
            HPM TR++SGI+KP++P+ L+  QS+PL  AL+ TSEPKG KSA K+  W+ AM++E+  
Sbjct: 801  HPMITRAKSGIFKPRHPSHLSFVQSSPLIHALLATSEPKGFKSAAKNPAWLAAMDDEIKV 860

Query: 1615 LKRNNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFS 1794
            L+ N+TW+LVPRP   NIVGSKWVFRTK L+DGS++R KARLVA+G++QLP         
Sbjct: 861  LQTNHTWDLVPRPSNTNIVGSKWVFRTKFLSDGSIERFKARLVAKGYTQLP--------- 911

Query: 1795 PVVKATTVRVVLALAIMNSWSLHQLDVKNAFLNGYC*TCIY 1917
                A+TVRVVL+L + + W L QLDVKNAFLNG     +Y
Sbjct: 912  ----ASTVRVVLSLVVSHKWPLCQLDVKNAFLNGILHETVY 948



 Score =  303 bits (775), Expect = 4e-79
 Identities = 136/213 (63%), Positives = 167/213 (78%)
 Frame = +3

Query: 483  VMSNSVFKYYAIFVDDFSRFVWFYPMHAKSEFYDIFVRFQKFVETQFSAKIRTFQSDGGT 662
            V SN  F YY +F+DD+SRF W YP+  KS+F+DIF++FQK VE Q+S KI+ FQSDGG 
Sbjct: 482  VKSNLGFNYYVLFIDDYSRFTWLYPLKLKSDFFDIFLQFQKLVENQYSTKIKIFQSDGGA 541

Query: 663  EFRSNKLQTLFVECGIQHIMSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSFWVEA 842
            EF SN+ Q+   + GI H MSCP+TP+QNGRAERKHRH+TETGLA+LFHS VP  +WV+A
Sbjct: 542  EFTSNRFQSHLQQFGIHHQMSCPYTPSQNGRAERKHRHVTETGLALLFHSHVPPRYWVDA 601

Query: 843  FSTAAFIINRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDYAASKFSPRSLA 1022
            FSTA +IINR+P  +L   SPFE+L+G  P Y +F  FGCRVYPCLRDYA  KFSPRSL 
Sbjct: 602  FSTATYIINRLPLPVLGGLSPFEVLFGKSPNYENFHPFGCRVYPCLRDYAPHKFSPRSLP 661

Query: 1023 CVFLGISSVHKGYKCYDPASGRIYITRHAKFDE 1121
            C+FLG SS HKG++C+D  + R YITRHA+FDE
Sbjct: 662  CIFLGYSSSHKGFRCFDTTTSRTYITRHARFDE 694



 Score = 94.0 bits (232), Expect = 4e-16
 Identities = 48/93 (51%), Positives = 62/93 (66%)
 Frame = +3

Query: 2721 LAVNRSTVPWLTQLLKLFGSPIYSRNFMSSCLDQPPVLLCDNRSAIFLSQNPVSHKRAKH 2900
            LA+  + V WLT LL+           +   L   P+LLCDN+SAIFLS NPVSHKRAKH
Sbjct: 1216 LALTAAEVLWLTHLLR----------DLRVTLTHRPLLLCDNKSAIFLSSNPVSHKRAKH 1265

Query: 2901 IDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            +D+DYHF+ EL+    L+ Q +PS +Q+ADVFT
Sbjct: 1266 VDLDYHFLRELIVAGTLRIQHIPSHLQLADVFT 1298


>emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]
          Length = 1207

 Score =  352 bits (904), Expect(2) = e-131
 Identities = 182/310 (58%), Positives = 223/310 (71%), Gaps = 3/310 (0%)
 Frame = +2

Query: 1898 IAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTS 2077
            + + VYM QPPG+ID+  P HVC LK ALYGL+QAP AW+QRF  F +  GF+ S  DTS
Sbjct: 846  LTEHVYMEQPPGYIDSRFPTHVCLLKKALYGLKQAPRAWFQRFSSFFLTLGFSSSRVDTS 905

Query: 2078 LFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYS 2257
            LF+F + S              TGN+P  + S   ++ SEFA KDLG L YFLGLE S +
Sbjct: 906  LFVFHQQSSLIYLLLYVDDIIVTGNNPSLLDSFTCKLHSEFATKDLGSLSYFLGLEASPT 965

Query: 2258 SAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRADGSPFSDLTLYRSLVGALQYL 2437
              GLF+GQ KYARDIL    L  SKPV TP+  +      G PFS+ TLYRSLVG LQYL
Sbjct: 966  PDGLFIGQLKYARDILTLTQLLDSKPVHTPMVVSQHLTVAGFPFSNPTLYRSLVGXLQYL 1025

Query: 2438 IITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKSS--TTVLGYSD 2608
             ITR D+++ VN+VSQF   PT DHF AVKRILRYVKGTL FG++F  S+  + ++ YSD
Sbjct: 1026 PITRLDIAHAVNSVSQFLHAPTIDHFLAVKRILRYVKGTLHFGLTFCPSTIPSALVAYSD 1085

Query: 2609 ADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLTNL 2788
            ADWA C DTRRST GYSI+LG+NLVSWSAKKQPTV+RSSCESEYRA+A TA+E++WLT+L
Sbjct: 1086 ADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALAMTAAELLWLTHL 1145

Query: 2789 LKELHVVLPR 2818
            L +L+V +P+
Sbjct: 1146 LHDLNVPIPQ 1155



 Score =  147 bits (372), Expect(2) = e-131
 Identities = 78/154 (50%), Positives = 103/154 (66%)
 Frame = +1

Query: 1435 HPMRTRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLA 1614
            HPM TR+++GI+K ++P +L +   + L  A + ++EPKG KSA K+  W+ AM+EE+ A
Sbjct: 709  HPMITRAKAGIFKTRHPVNLGVLGFSGLLSAFLASTEPKGFKSAAKNPTWLAAMDEEVQA 768

Query: 1615 LKRNNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFS 1794
            L++N TW LV RP   NI                  R KARLVA+G++Q+ G D+T TFS
Sbjct: 769  LQQNGTWILVSRPVNTNI------------------RLKARLVAKGYTQVLGLDYTDTFS 810

Query: 1795 PVVKATTVRVVLALAIMNSWSLHQLDVKNAFLNG 1896
            PVVKATTVRVVL+LA+ N W L QLDVKN FLNG
Sbjct: 811  PVVKATTVRVVLSLAVTNKWPLRQLDVKNTFLNG 844



 Score =  184 bits (468), Expect = 2e-43
 Identities = 95/213 (44%), Positives = 123/213 (57%)
 Frame = +3

Query: 483  VMSNSVFKYYAIFVDDFSRFVWFYPMHAKSEFYDIFVRFQKFVETQFSAKIRTFQSDGGT 662
            + SNS F YY IF+DD+SRF W YP+  KS+F+DIF++FQKFVE Q SA+I+ FQSDG  
Sbjct: 462  IKSNSSFLYYVIFIDDYSRFTWLYPLKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGVV 521

Query: 663  EFRSNKLQTLFVECGIQHIMSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSFWVEA 842
            EF +   +      GI H +S P+TPAQNGRAERKHRH+TETGLA+LFHS +   FW +A
Sbjct: 522  EFTNTCFKAHLHTSGIHHQLSYPYTPAQNGRAERKHRHVTETGLALLFHSHISPRFWFDA 581

Query: 843  FSTAAFIINRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDYAASKFSPRSLA 1022
                                                   C +Y     ++ S   P    
Sbjct: 582  ---------------------------------------CNLYHQPVAHSTSWCIP---- 598

Query: 1023 CVFLGISSVHKGYKCYDPASGRIYITRHAKFDE 1121
            C+FLG S  HKG++C +P + R+YITRHA+FDE
Sbjct: 599  CIFLGYSPSHKGFRCLEPTTSRLYITRHAQFDE 631



 Score = 87.0 bits (214), Expect = 5e-14
 Identities = 44/86 (51%), Positives = 57/86 (66%)
 Frame = +3

Query: 2721 LAVNRSTVPWLTQLLKLFGSPIYSRNFMSSCLDQPPVLLCDNRSAIFLSQNPVSHKRAKH 2900
            LA+  + + WLT LL     PI           Q P+LLCDN+ AIFLS NPVSHKRAKH
Sbjct: 1132 LAMTAAELLWLTHLLHDLNVPI----------PQQPLLLCDNKGAIFLSSNPVSHKRAKH 1181

Query: 2901 IDIDYHFV*ELVDQARLKTQFVPSSM 2978
            +++DYHF+ ELV   +L+TQ+VPS +
Sbjct: 1182 VELDYHFLRELVVAGKLRTQYVPSHL 1207


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  295 bits (754), Expect(3) = e-130
 Identities = 155/300 (51%), Positives = 193/300 (64%), Gaps = 3/300 (1%)
 Frame = +2

Query: 1910 VYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTSLFIF 2089
            V+M QPPGFI++  P HVC+L  ALYGL+QAP AWY +    L+  GF  S AD+S+FI 
Sbjct: 834  VFMQQPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIH 893

Query: 2090 RRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYSSAGL 2269
                              TG+    +SS + R+ S FA++DLG + YFLG+EV  S    
Sbjct: 894  HSTHDVLILLIYVDDILVTGSSSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVRSGTMF 953

Query: 2270 FLGQAKYARDILLRADLFHSKPVSTP-LAPNVTFRADGSPFSDLTLYRSLVGALQYLIIT 2446
             L Q KY +D+L R  +  SKP +TP L        DG PFSD TLYRS VGALQYL +T
Sbjct: 954  HLSQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLT 1013

Query: 2447 RPDLSYVVNTVSQFQR-PTDDHFQAVKRILRYVKGTLDFGISFTKS-STTVLGYSDADWA 2620
            RPD+S+ VN   QF   PT  H+ AVKRILRY+KGTL +GI   +S S  + GY+DADWA
Sbjct: 1014 RPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYTDADWA 1073

Query: 2621 RCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLTNLLKEL 2800
             C D RRST GY IFLG NLVSWS+ KQ  V+RSS ESEYRA+A+  SE+IW+  +L+EL
Sbjct: 1074 SCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEMIWIQYVLQEL 1133



 Score =  153 bits (387), Expect(3) = e-130
 Identities = 78/154 (50%), Positives = 107/154 (69%)
 Frame = +1

Query: 1435 HPMRTRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLA 1614
            HPM TR+++GI K K            +Y +  + SEP     A+K  +WV AM +E  A
Sbjct: 688  HPMVTRAKNGISKKK------------VYFSSHI-SEPTTFTQAVKDSNWVLAMEKEFSA 734

Query: 1615 LKRNNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFS 1794
            L+RNNTW LVP P   NI+G KWV++ K   DG++DR+KARLVAQGF+Q  G ++  TFS
Sbjct: 735  LQRNNTWHLVPPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQTLGLBYFETFS 794

Query: 1795 PVVKATTVRVVLALAIMNSWSLHQLDVKNAFLNG 1896
            PVVKA+T+R++LA+A+  +WS+HQLDV+NAFL+G
Sbjct: 795  PVVKASTIRIILAVALSFNWSVHQLDVQNAFLHG 828



 Score = 69.3 bits (168), Expect(3) = e-130
 Identities = 31/59 (52%), Positives = 44/59 (74%)
 Frame = +3

Query: 2823 PPVLLCDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            PP+L CDN+SA  L+ NPV H R KHI++D HF+ + V + +L  Q++PS+ QVAD+FT
Sbjct: 1140 PPLLWCDNKSAAHLAANPVFHARTKHIEMDLHFIRDHVLRKQLVIQYLPSAEQVADIFT 1198



 Score =  168 bits (425), Expect = 2e-38
 Identities = 79/149 (53%), Positives = 101/149 (67%)
 Frame = +3

Query: 675  NKLQTLFVECGIQHIMSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSFWVEAFSTA 854
            N   +     GI+   SCP+TP QNGRAERK RHI ETGLA+L  +S+P  FW+ AF T 
Sbjct: 461  NAFSSYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTT 520

Query: 855  AFIINRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDYAASKFSPRSLACVFL 1034
             F+INR+P+ +L  +SPF++L+G  P Y  F+IFGC  YP +R Y  +K S RS  CVFL
Sbjct: 521  IFLINRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFL 580

Query: 1035 GISSVHKGYKCYDPASGRIYITRHAKFDE 1121
            G SS HKGY C +P +GR+Y+TRH  F E
Sbjct: 581  GYSSNHKGYMCLNPLTGRLYVTRHVVFHE 609


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  301 bits (772), Expect(3) = e-129
 Identities = 161/314 (51%), Positives = 209/314 (66%), Gaps = 5/314 (1%)
 Frame = +2

Query: 1898 IAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTS 2077
            + + VYM QPPGF  +++PD+VC+L  ALYGL+QAP AWY R    LV  GF  S ADTS
Sbjct: 1055 LEEEVYMQQPPGFESSSKPDYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTS 1114

Query: 2078 LFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYS 2257
            LF   +G                 +  KA ++LL  +  EFA+KDLG L YFLG+EV+  
Sbjct: 1115 LFFLNKGGILMFVLVYVDDIIVASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKV 1174

Query: 2258 SAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRA-DGSPF--SDLTLYRSLVGAL 2428
            S G+ L Q KYA D+L R ++ + KPVSTPL+ +      +GSP   +D   YRS+VGAL
Sbjct: 1175 SNGVILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGAL 1234

Query: 2429 QYLIITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKS-STTVLGY 2602
            QYL +TRPD++Y VN V QF   PT  H+ AVKRILRY+      G+   KS ST V GY
Sbjct: 1235 QYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHIHKSASTLVHGY 1294

Query: 2603 SDADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLT 2782
            SDADWA  +D R+ST G+++FLG NLVSWSA+KQPTV+RSS E+EY+A+ANT +E+IW+ 
Sbjct: 1295 SDADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQ 1354

Query: 2783 NLLKELHVVLPRSA 2824
             LLKEL +  P++A
Sbjct: 1355 TLLKELGIESPKAA 1368



 Score =  146 bits (368), Expect(3) = e-129
 Identities = 75/151 (49%), Positives = 100/151 (66%)
 Frame = +1

Query: 1447 TRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLALKRN 1626
            TR +SGI K K   D  ++     Y     T EP+  K A+   +W +AM  E  AL +N
Sbjct: 909  TRLRSGIRKEKVYTDGTVK-----YGCFSSTGEPQNDKEALGDKNWRDAMETEYNALIKN 963

Query: 1627 NTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFSPVVK 1806
            +TW LVP   G NI+G KWV++ K  ADG+LDR+KARLVA+GF Q  G D+  TFSPVVK
Sbjct: 964  DTWHLVPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVK 1023

Query: 1807 ATTVRVVLALAIMNSWSLHQLDVKNAFLNGY 1899
            A T+R++L++A+   WSL QLDV+NAFL+G+
Sbjct: 1024 AATIRIILSIAVSRGWSLRQLDVQNAFLHGF 1054



 Score = 67.8 bits (164), Expect(3) = e-129
 Identities = 33/54 (61%), Positives = 37/54 (68%)
 Frame = +3

Query: 2838 CDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            CDN  A +LS NPV H R KHI++DYHFV E V Q  L+  FVPS  QVAD FT
Sbjct: 1372 CDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFT 1425



 Score =  195 bits (495), Expect = 1e-46
 Identities = 98/208 (47%), Positives = 127/208 (61%), Gaps = 2/208 (0%)
 Frame = +3

Query: 504  KYYAIFVDDFSRFVWFYPMHAKSEFYDIFVRFQKFVETQFSAKIRTFQSD--GGTEFRSN 677
            KYY  F+DDFS+F W Y +  KSE ++ F  FQ  VE  F  KI   Q+D  GG   R  
Sbjct: 533  KYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWRGG---RYQ 589

Query: 678  KLQTLFVECGIQHIMSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSFWVEAFSTAA 857
            KL + F + G+  +        QNG AERKHRHI E GL++L ++S+PL FW EAF  A 
Sbjct: 590  KLNSFFAQIGLIIMCHVLTLIRQNGSAERKHRHIVEVGLSLLSYASMPLKFWDEAFVAAT 649

Query: 858  FIINRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDYAASKFSPRSLACVFLG 1037
            ++INR+PS  ++N +P E L+   P Y   R+FGC  +P LR Y   K   RS  CVFLG
Sbjct: 650  YLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLG 709

Query: 1038 ISSVHKGYKCYDPASGRIYITRHAKFDE 1121
             S+ HKG+KC D +SGR+YI+R   FDE
Sbjct: 710  FSTHHKGFKCLDVSSGRVYISRDVVFDE 737


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  301 bits (770), Expect(3) = e-129
 Identities = 160/314 (50%), Positives = 210/314 (66%), Gaps = 5/314 (1%)
 Frame = +2

Query: 1898 IAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTS 2077
            + + VYM QPPGF   ++P++VC+L  ALYGL+QAP AWY R    LV  GF  S ADTS
Sbjct: 1046 LEEEVYMQQPPGFESFSKPNYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTS 1105

Query: 2078 LFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYS 2257
            LF   +G                 +  KA ++LL  +  EFA+KDLG L YFLG+EV+  
Sbjct: 1106 LFFLNKGGIIMFVLVYVDDIIIASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKV 1165

Query: 2258 SAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRA-DGSPF--SDLTLYRSLVGAL 2428
              G+ L Q KYA D+L R ++ + KPVSTPL+ +      +GSP   +D T YRS+VGAL
Sbjct: 1166 PNGIVLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGAL 1225

Query: 2429 QYLIITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKS-STTVLGY 2602
            QYL +TRPD++Y VN V QF   PT DH+ AVKRILRY+      G++  KS ST V GY
Sbjct: 1226 QYLTLTRPDIAYSVNKVCQFLHAPTTDHWTAVKRILRYLNQCTSLGLNIHKSASTLVHGY 1285

Query: 2603 SDADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLT 2782
            SDADWA  +D R+ST G+++FLG NLVSWSA+KQPTV+RSS E+EY+A+ANT +E+IW+ 
Sbjct: 1286 SDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQ 1345

Query: 2783 NLLKELHVVLPRSA 2824
             LL+EL +  P++A
Sbjct: 1346 TLLRELGIDSPKAA 1359



 Score =  145 bits (365), Expect(3) = e-129
 Identities = 74/151 (49%), Positives = 99/151 (65%)
 Frame = +1

Query: 1447 TRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLALKRN 1626
            TR +SGI K K   D  ++     Y     T EP+  K A+   +W  AM  E  AL +N
Sbjct: 900  TRLRSGIRKEKVYTDGTVK-----YGCFTSTGEPQNDKEALGDKNWKAAMEAEYDALIKN 954

Query: 1627 NTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFSPVVK 1806
            +TW LVP   G N++G KWV++ K  ADG+LDR+KARLVA+GF Q  G D+  TFSPVVK
Sbjct: 955  DTWHLVPYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVK 1014

Query: 1807 ATTVRVVLALAIMNSWSLHQLDVKNAFLNGY 1899
            A T+R++L++A+   WSL QLDV+NAFL+G+
Sbjct: 1015 AATIRIILSIAVSRGWSLRQLDVQNAFLHGF 1045



 Score = 68.2 bits (165), Expect(3) = e-129
 Identities = 35/64 (54%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
 Frame = +3

Query: 2814 LDQPPV--LLCDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVA 2987
            +D P    + CDN  A +LS NPV H R KHI++DYHFV E V Q  L+  FVPS  QVA
Sbjct: 1353 IDSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVA 1412

Query: 2988 DVFT 2999
            D FT
Sbjct: 1413 DGFT 1416



 Score =  218 bits (556), Expect = 1e-53
 Identities = 105/206 (50%), Positives = 134/206 (65%)
 Frame = +3

Query: 504  KYYAIFVDDFSRFVWFYPMHAKSEFYDIFVRFQKFVETQFSAKIRTFQSDGGTEFRSNKL 683
            KYY  F+DDFS+F W Y +  KSE ++ F  FQ  VE  F  KI   Q+D G E++  KL
Sbjct: 534  KYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQ--KL 591

Query: 684  QTLFVECGIQHIMSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSFWVEAFSTAAFI 863
             + F + GI H +SCPHT  QNG AERKHRHI E GL++L ++S+PL FW EAF  A ++
Sbjct: 592  NSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYL 651

Query: 864  INRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDYAASKFSPRSLACVFLGIS 1043
            INRVPS  ++N +P E L+   P Y   R+FGC  +P LR Y   K   RS  CVFLG S
Sbjct: 652  INRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFS 711

Query: 1044 SVHKGYKCYDPASGRIYITRHAKFDE 1121
            + HKG+KC D +SGR+YI+R   FDE
Sbjct: 712  THHKGFKCLDVSSGRVYISRDVVFDE 737


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  295 bits (755), Expect(3) = e-127
 Identities = 160/315 (50%), Positives = 206/315 (65%), Gaps = 5/315 (1%)
 Frame = +2

Query: 1895 VIAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADT 2074
            V+ + VYM QPPG+ D++ P +VC+L  ALYGL+QAP AWY R    L   GF  S ADT
Sbjct: 856  VLEEEVYMKQPPGYEDSSLPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDMGFQGSKADT 915

Query: 2075 SLFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSY 2254
            SLF + +G               T +  +A+ +LL  ++ EFA+KDLG L YFLG+EV+ 
Sbjct: 916  SLFFYNKGDLIIFVLIYVDDIIVTSSRQEAVPALLRDLQKEFALKDLGDLHYFLGIEVTK 975

Query: 2255 SSAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRA-DGSPF--SDLTLYRSLVGA 2425
             S G+ L Q KY  D+L R ++F  KPVSTPL+ +      +G P   +D T YRS+VGA
Sbjct: 976  VSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGA 1035

Query: 2426 LQYLIITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKS-STTVLG 2599
            LQYL +TRPD+++ VN V QF   PT  H+ AVKRILRY+K     G+  +KS S  V  
Sbjct: 1036 LQYLTLTRPDIAFPVNKVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSA 1095

Query: 2600 YSDADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWL 2779
            YSDADWA  LD RRST G+++FLGDNLVSWSA+KQ TV+RSS ESEY+A+AN  +EI+W+
Sbjct: 1096 YSDADWAGSLDDRRSTGGFAVFLGDNLVSWSARKQATVSRSSTESEYKALANATAEIMWV 1155

Query: 2780 TNLLKELHVVLPRSA 2824
              LL EL V  P  A
Sbjct: 1156 QTLLAELQVESPSMA 1170



 Score =  146 bits (369), Expect(3) = e-127
 Identities = 73/150 (48%), Positives = 98/150 (65%)
 Frame = +1

Query: 1447 TRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLALKRN 1626
            TR QSGI K K   D  ++        L VT EP+ +  A+K  +W  AM+ E +AL+ N
Sbjct: 709  TRLQSGIRKEKVYTDGTVKYRTTF---LTVTGEPENLDDALKDNNWKKAMDAEFMALQNN 765

Query: 1627 NTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFSPVVK 1806
             TW LVP   G N++  KWV++ K   DGSLDR+KARLVA+GF Q  G D+  TFSPVVK
Sbjct: 766  KTWHLVPPQKGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVK 825

Query: 1807 ATTVRVVLALAIMNSWSLHQLDVKNAFLNG 1896
            A T+R++L++A+   W + QLDV+NAFL+G
Sbjct: 826  AATIRIILSIAVSKGWCMRQLDVQNAFLHG 855



 Score = 65.9 bits (159), Expect(3) = e-127
 Identities = 32/56 (57%), Positives = 38/56 (67%)
 Frame = +3

Query: 2832 LLCDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            L CDN  A +LS NPV H R KHI++DYHFV E V +  L+  FVP+  QVAD FT
Sbjct: 1172 LWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSRKLLEIDFVPTGDQVADGFT 1227



 Score =  189 bits (480), Expect = 7e-45
 Identities = 94/178 (52%), Positives = 116/178 (65%)
 Frame = +3

Query: 588  FVRFQKFVETQFSAKIRTFQSDGGTEFRSNKLQTLFVECGIQHIMSCPHTPAQNGRAERK 767
            F  FQ  VE  F+ KI   QSD G E+   KL + F + GI H +SCPHT  QNG AERK
Sbjct: 360  FHEFQALVERLFNRKILAMQSDWGGEYE--KLNSFFTKIGITHHVSCPHTHQQNGSAERK 417

Query: 768  HRHITETGLAMLFHSSVPLSFWVEAFSTAAFIINRVPSTLLKNKSPFELLYGSIPAYGDF 947
            HRHI E GLA+L +SS+PL FW EAF++A ++INR PS LLK  +P E L+   P Y   
Sbjct: 418  HRHIVEMGLALLAYSSMPLKFWDEAFTSAVYLINRTPSRLLKYATPLERLFKQTPDYNLL 477

Query: 948  RIFGCRVYPCLRDYAASKFSPRSLACVFLGISSVHKGYKCYDPASGRIYITRHAKFDE 1121
            R+FGC  +P LR Y A K   RS  C FLG S +HKG+KC DP++GR+YI+    FDE
Sbjct: 478  RVFGCACWPHLRPYNARKLQFRSKQCTFLGYSPLHKGFKCLDPSTGRVYISHDVIFDE 535


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  276 bits (706), Expect(3) = e-126
 Identities = 141/304 (46%), Positives = 198/304 (65%), Gaps = 3/304 (0%)
 Frame = +2

Query: 1898 IAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTS 2077
            + + V+M QP GF++ T P +VC+L  ALYGL+QAP AW+Q+ R  L+  GF  S ADTS
Sbjct: 977  LEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTS 1036

Query: 2078 LFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYS 2257
            LFIF   +              TG++P  +S  ++ +R++FA++DLG L YFLG++    
Sbjct: 1037 LFIFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQL 1096

Query: 2258 SAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTF-RADGSPFSDLTLYRSLVGALQY 2434
             + L L Q KY  D+L R  +  SKP  TP     T  ++DG   SD + YR  VGALQY
Sbjct: 1097 GSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRTVGALQY 1156

Query: 2435 LIITRPDLSYVVNTVSQFQ-RPTDDHFQAVKRILRYVKGTLDFGISFTKSSTTVL-GYSD 2608
            + +TRPD+++ VN   QF  +P+D H+ AVKRILRY+KGT+  G+ F  +++  L GYSD
Sbjct: 1157 VTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMELQGYSD 1216

Query: 2609 ADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLTNL 2788
            ADWA C D RRST GY +FLG NL+SWS+ KQ  V++SS ESEYR + +  +E++W+ +L
Sbjct: 1217 ADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSL 1276

Query: 2789 LKEL 2800
            L+EL
Sbjct: 1277 LQEL 1280



 Score =  160 bits (404), Expect(3) = e-126
 Identities = 82/156 (52%), Positives = 104/156 (66%), Gaps = 2/156 (1%)
 Frame = +1

Query: 1435 HPMRTRSQSGIYKPKYPADLALQQSNPLYCALIV--TSEPKGVKSAMKHLHWVNAMNEEM 1608
            HPM TR++SGI+K +               + IV  T+EP+    A K+  WV AMN E 
Sbjct: 835  HPMVTRAKSGIHKKR---------------SFIVQHTTEPRTYSQASKNDSWVQAMNSEY 879

Query: 1609 LALKRNNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHT 1788
             AL RNNTW LVP P   +IVG +W+++ K   DGS+DRHKARLVAQGF+Q PG D+  T
Sbjct: 880  QALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDT 939

Query: 1789 FSPVVKATTVRVVLALAIMNSWSLHQLDVKNAFLNG 1896
            FSPVVK  T+R++LALA+   WS+ QLDV+NAFLNG
Sbjct: 940  FSPVVKPCTIRLILALAVSFQWSVRQLDVENAFLNG 975



 Score = 69.3 bits (168), Expect(3) = e-126
 Identities = 31/59 (52%), Positives = 43/59 (72%)
 Frame = +3

Query: 2823 PPVLLCDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            PP+L CDN+SA  L+ NPV H R+KHI++D HF+ E V +  L+  +VPS  Q+AD+FT
Sbjct: 1286 PPILWCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQICYVPSGDQLADIFT 1344



 Score =  195 bits (496), Expect = 9e-47
 Identities = 96/207 (46%), Positives = 128/207 (61%), Gaps = 1/207 (0%)
 Frame = +3

Query: 504  KYYAIFVDDFSRFVWFYPMHAKSEFYDIFVRFQKFVETQFSAKIRTFQSDGGTEFRSNKL 683
            +Y+ IF+DD+SR  W Y +  K +    F+ F+K VE Q    I+  QSD G EF + K 
Sbjct: 557  RYFLIFIDDYSRHTWIYFLSTKDQALQSFITFRKMVENQLQTTIKCIQSDNGGEFLAFKP 616

Query: 684  QTLFVEC-GIQHIMSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSFWVEAFSTAAF 860
               ++E  GI H  SCPHTP QNGRAERK RH+ ETGLA++  S +P  +W  AF TA +
Sbjct: 617  ---YLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVY 673

Query: 861  IINRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDYAASKFSPRSLACVFLGI 1040
            +IN +P+ LL  +SP + L+  +P Y   R+FGC  +P LR Y   K   RS ACVFLG 
Sbjct: 674  LINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGY 733

Query: 1041 SSVHKGYKCYDPASGRIYITRHAKFDE 1121
            +  HKGY C D ++ RIYI+R+  F E
Sbjct: 734  APAHKGYLCLDVSTNRIYISRNVIFHE 760


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 900

 Score =  288 bits (738), Expect(3) = e-126
 Identities = 157/320 (49%), Positives = 207/320 (64%), Gaps = 15/320 (4%)
 Frame = +2

Query: 1910 VYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTSLFIF 2089
            VYM QPPGF DA +P  +C+L  ALYGL+QAP AWY R    L   GF+ S ADTSLF +
Sbjct: 506  VYMRQPPGFEDARQPHFLCKLDKALYGLKQAPRAWYSRLSKKLQELGFSSSKADTSLFFY 565

Query: 2090 RRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYSSAGL 2269
             +G                 +   A+++LL  +  +FA+KDLG L YFLG+EV  +   L
Sbjct: 566  NKGHHKMFVLVYVDDIIVASSSSPAVNALLKDLEKDFALKDLGDLHYFLGIEVKRTPQTL 625

Query: 2270 FLGQAKYARDILLRADLFHSKPVSTPLAP----NVTFRADGSPFSDLTLYRSLVGALQYL 2437
             L Q +Y  ++L R ++   KPVSTPL+     +V    +  P SD+T YRS+VGALQYL
Sbjct: 626  LLSQERYTTELLERVNMTSCKPVSTPLSTAEKLSVEIGDELGP-SDVTQYRSIVGALQYL 684

Query: 2438 IITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKSSTTVLG-YSDA 2611
             +TRPD+SY VN V QF Q PT  H+ AVKRILRY+KGTLD G+   KSS+ ++  +SDA
Sbjct: 685  TLTRPDISYSVNKVCQFLQTPTTAHWSAVKRILRYLKGTLDLGLKIVKSSSNLVSAFSDA 744

Query: 2612 DWARCLDTRRSTYGYS---------IFLGDNLVSWSAKKQPTVARSSCESEYRAMANTAS 2764
            DWA  +D RRST G++         +F GDNL+SWSA+KQ TV+RSS E+EY+A+AN A+
Sbjct: 745  DWAGSVDDRRSTGGFADRRSTGGFAVFFGDNLISWSARKQATVSRSSTEAEYKALANAAA 804

Query: 2765 EIIWLTNLLKELHVVLPRSA 2824
            EIIW+  LL EL ++ P +A
Sbjct: 805  EIIWVRKLLTELGILHPNAA 824



 Score =  153 bits (386), Expect(3) = e-126
 Identities = 76/151 (50%), Positives = 102/151 (67%)
 Frame = +1

Query: 1447 TRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLALKRN 1626
            TRSQ G+++PK   D  ++     Y  L  T EP  ++ A+   +W  AM++E  AL  N
Sbjct: 356  TRSQHGVHRPKKYTDGTVR-----YGCLTETGEPSSLQEALSSANWKQAMDKEFSALLHN 410

Query: 1627 NTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFSPVVK 1806
             TW LVP   G NI+ SKWV++ K  ADG++DR+KARLVA+GF Q  G D+  TFSPVVK
Sbjct: 411  KTWHLVPPVKGKNIIDSKWVYKIKKKADGTIDRYKARLVAKGFKQRYGIDYEDTFSPVVK 470

Query: 1807 ATTVRVVLALAIMNSWSLHQLDVKNAFLNGY 1899
            A T+R+VL++A+   WSL QLDV+NAFL+GY
Sbjct: 471  AATIRLVLSIAMSQGWSLRQLDVQNAFLHGY 501



 Score = 62.8 bits (151), Expect(3) = e-126
 Identities = 31/56 (55%), Positives = 36/56 (64%)
 Frame = +3

Query: 2832 LLCDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            L CDN  A +++ NPV H R KHI++DYHFV E V Q  L   FV S  QVAD FT
Sbjct: 826  LWCDNLGATYMTANPVFHARTKHIEVDYHFVREQVAQKLLDIHFVSSQDQVADGFT 881



 Score =  161 bits (408), Expect = 1e-36
 Identities = 81/170 (47%), Positives = 106/170 (62%)
 Frame = +3

Query: 612  ETQFSAKIRTFQSDGGTEFRSNKLQTLFVECGIQHIMSCPHTPAQNGRAERKHRHITETG 791
            E     KI++ Q+D G E++  +L + F   GI H +SCPH   QNG AERKHRHI E G
Sbjct: 3    ERLLDRKIKSVQTDWGGEYQ--RLNSFFQRIGISHHVSCPHAHQQNGSAERKHRHIVEVG 60

Query: 792  LAMLFHSSVPLSFWVEAFSTAAFIINRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVY 971
            L++L H+S+PL FW EAF TA ++INR P  ++   +P   L+   P Y   R FGC  +
Sbjct: 61   LSLLAHASMPLKFWDEAFLTATYLINRTPMKIIHYDTP-AYLFEEQPDYNALRTFGCACW 119

Query: 972  PCLRDYAASKFSPRSLACVFLGISSVHKGYKCYDPASGRIYITRHAKFDE 1121
            P LR Y   K + RS  CVFLG S +HKG+KC +  SGR+YI+R   FDE
Sbjct: 120  PNLRPYNTHKLAFRSKQCVFLGYSPLHKGFKCLEVNSGRVYISRDVVFDE 169


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
            gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
            Japonica Group]
          Length = 821

 Score =  293 bits (750), Expect(3) = e-126
 Identities = 157/315 (49%), Positives = 204/315 (64%), Gaps = 5/315 (1%)
 Frame = +2

Query: 1895 VIAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADT 2074
            V+ + VYM QPPG+   + P++VC+L  ALYGL+QAP AWY R    L   GF  S ADT
Sbjct: 424  VLEEEVYMEQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADT 483

Query: 2075 SLFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSY 2254
            SLF +++G                 + P A S+LL  +  +FA+KDLG L YFLG+EV  
Sbjct: 484  SLFFYKKGQVSIFLLIYVDDIIMASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHK 543

Query: 2255 SSAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRADGSPF---SDLTLYRSLVGA 2425
               GL L Q KYA D+L R  ++  KPVSTPL+ +     +        D T YRS+VGA
Sbjct: 544  VKDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGA 603

Query: 2426 LQYLIITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKS-STTVLG 2599
            LQYL +TRPD+S+ +N V QF   PT  H+ AVKRILRYVK T+D G+ F ++ S  V G
Sbjct: 604  LQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSG 663

Query: 2600 YSDADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWL 2779
            +SDADWA   D RRST G+++FLG NLVSWSA+KQ TV+RSS E+EY+A+AN  +EI+W+
Sbjct: 664  FSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWV 723

Query: 2780 TNLLKELHVVLPRSA 2824
              LL+EL V  PR+A
Sbjct: 724  QTLLQELGVESPRAA 738



 Score =  151 bits (381), Expect(3) = e-126
 Identities = 77/151 (50%), Positives = 100/151 (66%)
 Frame = +1

Query: 1444 RTRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLALKR 1623
            +TR QSGI K K   D  ++  N        + EP+ ++ A+ + HW  AM+ E +AL  
Sbjct: 278  KTRLQSGIRKEKVYTDGTVKWLN-----FTSSGEPQSLEEAVNNKHWKEAMDAEYMALIE 332

Query: 1624 NNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFSPVV 1803
            N TW LVP   G N++  KWV++ K  ADGSLDR+KARLVA+GF Q  G D+  TFSPVV
Sbjct: 333  NKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVV 392

Query: 1804 KATTVRVVLALAIMNSWSLHQLDVKNAFLNG 1896
            KA T+R+VL+LA+   WSL QLDVKNAFL+G
Sbjct: 393  KAATIRIVLSLAVSRGWSLRQLDVKNAFLHG 423



 Score = 58.2 bits (139), Expect(3) = e-126
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = +3

Query: 2832 LLCDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            L CDN  A +LS NP+ H R KHI++D+HFV E V +  L+  ++ +  QVAD FT
Sbjct: 740  LWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFT 795



 Score =  105 bits (262), Expect = 1e-19
 Identities = 49/102 (48%), Positives = 66/102 (64%)
 Frame = +3

Query: 816  VPLSFWVEAFSTAAFIINRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDYAA 995
            +P+ FW EA   AA++INR PS ++    P E L+   P Y   RIFGC V+P LR Y  
Sbjct: 1    MPIKFWDEAVLAAAYLINRTPSKVINFACPLEQLFKEKPNYTALRIFGCAVWPNLRPYNK 60

Query: 996  SKFSPRSLACVFLGISSVHKGYKCYDPASGRIYITRHAKFDE 1121
             K + RS  CVFLG S++HKG+KC + A+GR+Y++R   FDE
Sbjct: 61   HKLAFRSKRCVFLGYSNLHKGFKCLEIATGRVYVSRDVTFDE 102


>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
          Length = 773

 Score =  274 bits (701), Expect(3) = e-126
 Identities = 141/304 (46%), Positives = 196/304 (64%), Gaps = 3/304 (0%)
 Frame = +2

Query: 1898 IAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTS 2077
            + + V+M QP GF++ T P +VC+L  ALYGL+QAP AW+Q+ R  L+  GF  S ADTS
Sbjct: 324  LEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTS 383

Query: 2078 LFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYS 2257
            LFIF   +              TG++P  +S  ++ +R++FA++DLG L YFLG++    
Sbjct: 384  LFIFHTATDILILLVYVDDILVTGSNPTLVSHFISYLRTKFALRDLGPLSYFLGIQAQQL 443

Query: 2258 SAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTF-RADGSPFSDLTLYRSLVGALQY 2434
             + L L Q KY  D+L R  +  SKP  TP     T  ++DG   SD + YR  VGALQY
Sbjct: 444  GSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGVSLSDPSEYRRTVGALQY 503

Query: 2435 LIITRPDLSYVVNTVSQFQ-RPTDDHFQAVKRILRYVKGTLDFGISF-TKSSTTVLGYSD 2608
            + +TRPD+++ VN   QF  +P+D H+ AVKRILRY+KGT+  G+ F   +S    GYSD
Sbjct: 504  VTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMEXQGYSD 563

Query: 2609 ADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLTNL 2788
            ADWA C D RRST GY +FLG NL+SWS+ KQ  V++SS ESEYR + +  +E++W+ +L
Sbjct: 564  ADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSL 623

Query: 2789 LKEL 2800
            L+EL
Sbjct: 624  LQEL 627



 Score =  159 bits (401), Expect(3) = e-126
 Identities = 81/156 (51%), Positives = 103/156 (66%), Gaps = 2/156 (1%)
 Frame = +1

Query: 1435 HPMRTRSQSGIYKPKYPADLALQQSNPLYCALIV--TSEPKGVKSAMKHLHWVNAMNEEM 1608
            HPM TR++SGI+K +               + IV  T+EP+    A K+  WV AMN E 
Sbjct: 182  HPMVTRAKSGIHKKR---------------SFIVQHTTEPRTYSQAFKNDSWVQAMNSEY 226

Query: 1609 LALKRNNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHT 1788
             AL RNNTW LVP P   +IVG +W+++ K   DGS+DRHKARLVAQGF+Q PG D+  T
Sbjct: 227  QALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDT 286

Query: 1789 FSPVVKATTVRVVLALAIMNSWSLHQLDVKNAFLNG 1896
            FSPVVK  T+R++LALA+   WS+ QLDV+N FLNG
Sbjct: 287  FSPVVKPCTIRLILALAVSFQWSVRQLDVENGFLNG 322



 Score = 69.3 bits (168), Expect(3) = e-126
 Identities = 31/59 (52%), Positives = 43/59 (72%)
 Frame = +3

Query: 2823 PPVLLCDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            PP+L CDN+SA  L+ NPV H R+KHI++D HF+ E V +  L+  +VPS  Q+AD+FT
Sbjct: 633  PPILWCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQICYVPSGDQLADIFT 691



 Score =  101 bits (252), Expect = 2e-18
 Identities = 47/104 (45%), Positives = 64/104 (61%)
 Frame = +3

Query: 810  SSVPLSFWVEAFSTAAFIINRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDY 989
            S +P  +W  AF TA ++IN +P+ LL  +SP + L+  +P Y   R+FGC  +P LR Y
Sbjct: 4    SFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPY 63

Query: 990  AASKFSPRSLACVFLGISSVHKGYKCYDPASGRIYITRHAKFDE 1121
               K   RS ACVFLG +  HKGY C D ++ RIYI+R+  F E
Sbjct: 64   TQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHE 107


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  288 bits (737), Expect(3) = e-125
 Identities = 156/314 (49%), Positives = 202/314 (64%), Gaps = 5/314 (1%)
 Frame = +2

Query: 1898 IAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTS 2077
            + + VYM QPPGF D T+P HVC+L  ALYGL+QAP AW+ R    L+  GF  S  DTS
Sbjct: 1063 LEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTS 1122

Query: 2078 LFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYS 2257
            LF   +G                 +  KA ++LL  ++ EFA+KDLG L YFLG+EVS  
Sbjct: 1123 LFFLNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIEVSKV 1182

Query: 2258 SAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRA-DGSPF--SDLTLYRSLVGAL 2428
              G+ L Q KYA D+L +  +   KP +TPL+ +      +GS     D + YRS+VGAL
Sbjct: 1183 QNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGAL 1242

Query: 2429 QYLIITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKS-STTVLGY 2602
            QYL +TRPD+++ VN V QF   PT  H+ AVKRILRY+K     G+   KS ST V G+
Sbjct: 1243 QYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGF 1302

Query: 2603 SDADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLT 2782
            SDADWA CLD RRST G++IFLG NLVSW+A+KQ TV+RSS ESEY+A+AN  +EI+W+ 
Sbjct: 1303 SDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQ 1362

Query: 2783 NLLKELHVVLPRSA 2824
             LL EL +  P++A
Sbjct: 1363 TLLAELEIKSPKAA 1376



 Score =  150 bits (378), Expect(3) = e-125
 Identities = 77/152 (50%), Positives = 101/152 (66%)
 Frame = +1

Query: 1444 RTRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLALKR 1623
            RTR QSG+ K K   D  ++  +  + A   + EP     A+K  +W  AM+ E  AL +
Sbjct: 914  RTRLQSGVRKEKVYTDGTIKYKHSWFTA---SGEPTNDLEALKDKNWKLAMDSEYDALVK 970

Query: 1624 NNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFSPVV 1803
            N TW LVP   G NI+G KWV++ K  ADG+LDR+KARLVA+GF Q  G D+  TFSPVV
Sbjct: 971  NKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVV 1030

Query: 1804 KATTVRVVLALAIMNSWSLHQLDVKNAFLNGY 1899
            KA T+R++L+LA+   WSL QLDV+NAFL+GY
Sbjct: 1031 KAATIRIILSLAVSKGWSLRQLDVQNAFLHGY 1062



 Score = 63.9 bits (154), Expect(3) = e-125
 Identities = 31/54 (57%), Positives = 37/54 (68%)
 Frame = +3

Query: 2838 CDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            CDN  A +LS NPV H R KHI++DYHFV E V Q  L+  FV ++ QVAD FT
Sbjct: 1380 CDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVSTNDQVADGFT 1433



 Score =  221 bits (564), Expect = 1e-54
 Identities = 108/206 (52%), Positives = 136/206 (66%)
 Frame = +3

Query: 504  KYYAIFVDDFSRFVWFYPMHAKSEFYDIFVRFQKFVETQFSAKIRTFQSDGGTEFRSNKL 683
            KYY  F+DDFS+F W Y +  KS+ +D F  FQ  VE QF  KI   Q+D G E++S  L
Sbjct: 528  KYYVSFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQS--L 585

Query: 684  QTLFVECGIQHIMSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSFWVEAFSTAAFI 863
             + F + GI H +SCPHT  QNG AERKHRHI E GL++L H+S+PL FW EAF  A ++
Sbjct: 586  NSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYL 645

Query: 864  INRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDYAASKFSPRSLACVFLGIS 1043
            INRVPS ++ N SP E L+   P Y   RIFGC  +P LR Y   K   RS  CVFLG S
Sbjct: 646  INRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFS 705

Query: 1044 SVHKGYKCYDPASGRIYITRHAKFDE 1121
            ++HKG+KC + ++GRIYI+R   FDE
Sbjct: 706  TMHKGFKCLEVSTGRIYISRDVVFDE 731


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  294 bits (753), Expect(3) = e-125
 Identities = 158/314 (50%), Positives = 207/314 (65%), Gaps = 5/314 (1%)
 Frame = +2

Query: 1898 IAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTS 2077
            + + VYM QPPGF  +++PD+VC+L  ALYGL+QAP AWY R    L   GF  S ADTS
Sbjct: 1058 LEEEVYMQQPPGFESSSKPDYVCKLNKALYGLKQAPRAWYSRLSKKLTELGFEASKADTS 1117

Query: 2078 LFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYS 2257
            LF   +G                 +  KA ++LL  +  EF +KDLG L YFLG+EV+  
Sbjct: 1118 LFFLNKGGIIMFVLVYVDDIIVASSTEKATTALLKDLNKEFTLKDLGDLHYFLGIEVTKV 1177

Query: 2258 SAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRA-DGSPF--SDLTLYRSLVGAL 2428
            S G+ L Q KYA D+L R ++ + KPVSTPL+ +      +GSP   +D T YRS+VGAL
Sbjct: 1178 SNGVILTQEKYANDMLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGAL 1237

Query: 2429 QYLIITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKS-STTVLGY 2602
            QYL +TRPD++Y VN V QF   PT  H+ AVKRILRY+      G+   KS ST V GY
Sbjct: 1238 QYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHVHKSASTLVHGY 1297

Query: 2603 SDADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLT 2782
            SDAD A  +D R+ST G+++FLG NLVSWSA+KQPTV+RSS E+EY+A+ANT +E+IW+ 
Sbjct: 1298 SDADGAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQ 1357

Query: 2783 NLLKELHVVLPRSA 2824
             +LKEL +  P++A
Sbjct: 1358 TVLKELGIESPKAA 1371



 Score =  140 bits (353), Expect(3) = e-125
 Identities = 71/151 (47%), Positives = 98/151 (64%)
 Frame = +1

Query: 1447 TRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLALKRN 1626
            TR +SGI K K   +  ++     Y     T EP+  K A+   +W +AM  E  AL +N
Sbjct: 912  TRLRSGIRKEKVYTNGTVK-----YGCFSSTGEPQNDKEALGDKNWRDAMETEYNALIKN 966

Query: 1627 NTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFSPVVK 1806
            +TW LVP   G NI+G KWV++ K  ADG+LDR+K RL+A+GF Q  G D+  TFSPVVK
Sbjct: 967  DTWHLVPYEKGQNIIGCKWVYKVKRKADGTLDRYKTRLIAKGFKQRYGIDYEDTFSPVVK 1026

Query: 1807 ATTVRVVLALAIMNSWSLHQLDVKNAFLNGY 1899
            A T+R++L++A+   WSL QLDV+N FL+G+
Sbjct: 1027 AATIRIILSIAVSRGWSLRQLDVQNDFLHGF 1057



 Score = 65.5 bits (158), Expect(3) = e-125
 Identities = 32/54 (59%), Positives = 36/54 (66%)
 Frame = +3

Query: 2838 CDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            CDN  A +LS NPV H + KHI +DYHFV E V Q  L+  FVPS  QVAD FT
Sbjct: 1375 CDNLGAKYLSANPVFHAKTKHIHVDYHFVRERVSQKLLEIDFVPSGDQVADGFT 1428



 Score =  210 bits (535), Expect = 3e-51
 Identities = 100/206 (48%), Positives = 131/206 (63%)
 Frame = +3

Query: 504  KYYAIFVDDFSRFVWFYPMHAKSEFYDIFVRFQKFVETQFSAKIRTFQSDGGTEFRSNKL 683
            KYY  F+DDFS+F W Y +  KSE ++ F  FQ  VE  F  KI   Q+D G E++  KL
Sbjct: 537  KYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQ--KL 594

Query: 684  QTLFVECGIQHIMSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSFWVEAFSTAAFI 863
             + F + GI H +SCPHT  QNG AERKH+HI E GL++L ++S+PL FW EAF  A ++
Sbjct: 595  NSFFAQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYL 654

Query: 864  INRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDYAASKFSPRSLACVFLGIS 1043
            INR+PS  ++N +P E L+   P Y   R+F C  +P L  Y   K   RS  CVFLG S
Sbjct: 655  INRIPSKTIQNSTPLEKLFNQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFS 714

Query: 1044 SVHKGYKCYDPASGRIYITRHAKFDE 1121
            + HKG+K  D +SGR+YI+R   FDE
Sbjct: 715  THHKGFKFLDVSSGRVYISRDVVFDE 740


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  293 bits (750), Expect(3) = e-125
 Identities = 155/315 (49%), Positives = 210/315 (66%), Gaps = 5/315 (1%)
 Frame = +2

Query: 1895 VIAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADT 2074
            V+ + VYM QPPG+ D+T+ ++VC+L  ALYGL+QAP AWY R  + L+  GF  S ADT
Sbjct: 922  VLEEEVYMQQPPGYEDSTKLNYVCKLDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADT 981

Query: 2075 SLFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSY 2254
            SLF + +GS                +  KA  +LL+ +  EFA+KDLG L YFLG+EV+ 
Sbjct: 982  SLFFYNKGSVTIFVLVYVDDIIVASSTHKATEALLSDLNKEFALKDLGDLNYFLGIEVNK 1041

Query: 2255 SSAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRA-DGSPFS--DLTLYRSLVGA 2425
               G+ L Q KYA D+L +  +   KP+STPL+ +      +GSP    D+T YRS+VGA
Sbjct: 1042 VRDGIILTQDKYASDLLKKVGMSDCKPISTPLSTSEKLSIHEGSPLGEKDITQYRSIVGA 1101

Query: 2426 LQYLIITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKS-STTVLG 2599
            LQYL +TRPD+++ VN V QF   PT  H+ AVKRILRY+K   + G+   +S ST V  
Sbjct: 1102 LQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDSTLVSA 1161

Query: 2600 YSDADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWL 2779
            +SDADWA  +D R+ST G+++FLG NLVSWSA+KQPTV+RSS ESEY+A+AN  +E+IW+
Sbjct: 1162 FSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTESEYKALANATAELIWV 1221

Query: 2780 TNLLKELHVVLPRSA 2824
              LL E+ +  PR+A
Sbjct: 1222 QILLTEISIKSPRAA 1236



 Score =  144 bits (364), Expect(3) = e-125
 Identities = 72/151 (47%), Positives = 99/151 (65%)
 Frame = +1

Query: 1444 RTRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLALKR 1623
            RTR Q G+ KPK   D  ++     Y     + EP  +  A+  ++W +AM+ E  AL +
Sbjct: 776  RTRLQQGVRKPKVYTDGTIR-----YGCFTSSGEPYDLNEALGDVNWKDAMDIEYSALMK 830

Query: 1624 NNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFSPVV 1803
            N TW LVP   G N++G KWV++ K  ADGSLDR+KARLVA+G+ Q  G D+  TFSPVV
Sbjct: 831  NKTWHLVPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSPVV 890

Query: 1804 KATTVRVVLALAIMNSWSLHQLDVKNAFLNG 1896
            K  T+R++L++A+   WSL QLDV+NAFL+G
Sbjct: 891  KHATIRIILSIAVSRGWSLCQLDVQNAFLHG 921



 Score = 62.4 bits (150), Expect(3) = e-125
 Identities = 29/56 (51%), Positives = 38/56 (67%)
 Frame = +3

Query: 2832 LLCDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            L CDN  A +LS NP+ H R KHI++DYHFV + V +  L  ++VP+  QVAD FT
Sbjct: 1238 LWCDNLGAKYLSANPIFHARTKHIEVDYHFVRDRVAKKLLDIEYVPTGDQVADGFT 1293



 Score =  191 bits (486), Expect = 1e-45
 Identities = 94/185 (50%), Positives = 121/185 (65%)
 Frame = +3

Query: 567  KSEFYDIFVRFQKFVETQFSAKIRTFQSDGGTEFRSNKLQTLFVECGIQHIMSCPHTPAQ 746
            KSE +  F  FQ  VE  F  KI   Q+D G E++  +L T F + GI H++SCPH   Q
Sbjct: 402  KSEVFQKFHEFQSLVERLFDRKILAVQTDWGGEYQ--RLNTFFNKIGISHLVSCPHAHQQ 459

Query: 747  NGRAERKHRHITETGLAMLFHSSVPLSFWVEAFSTAAFIINRVPSTLLKNKSPFELLYGS 926
            NG AERKHRHI E GL++L H+S+PL FW EAF  AA++INR P+ +L   +PFE L+  
Sbjct: 460  NGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFHK 519

Query: 927  IPAYGDFRIFGCRVYPCLRDYAASKFSPRSLACVFLGISSVHKGYKCYDPASGRIYITRH 1106
             P Y   RIFGC  +P LR Y + K   RS  CVFLG SS+HKG+KC D ++GR+Y++R 
Sbjct: 520  QPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRD 579

Query: 1107 AKFDE 1121
              FDE
Sbjct: 580  VTFDE 584


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  283 bits (724), Expect(3) = e-124
 Identities = 156/314 (49%), Positives = 199/314 (63%), Gaps = 5/314 (1%)
 Frame = +2

Query: 1898 IAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTS 2077
            + + VYM QPPG+ D + P +VC+L  ALYGL+QAP AWY R    L   GF  S  DTS
Sbjct: 1057 LEEEVYMKQPPGYEDESFPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDLGFQGSKGDTS 1116

Query: 2078 LFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYS 2257
            LF + +G               T +  +A+S+LL  ++ EFA+KDLG L YFLG+EV+  
Sbjct: 1117 LFFYNKGGLIIFVLIYVDDIIVTSSRQEAVSALLQDLKKEFALKDLGDLHYFLGIEVNKV 1176

Query: 2258 SAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRADGSPF---SDLTLYRSLVGAL 2428
            +  + L Q KYA D+L R ++F  KPVSTPL+ +    A         D T YRS+VGAL
Sbjct: 1177 TDEIILTQDKYACDLLRRVNMFDCKPVSTPLSTSEKLSAHEGDLLGPLDATNYRSVVGAL 1236

Query: 2429 QYLIITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKS-STTVLGY 2602
            QYL +TRPD+++ VN V QF   PT  H+ AVKRILRY+K     G+   KS S  V  Y
Sbjct: 1237 QYLTLTRPDIAFPVNKVCQFLHAPTTVHWAAVKRILRYLKQCTKLGLKLCKSKSMLVSAY 1296

Query: 2603 SDADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLT 2782
            SDADWA  LD RRST G+++FLGDNLVSW A+KQ TV+RSS ESEY+A+AN  +EI+W+ 
Sbjct: 1297 SDADWAGSLDDRRSTGGFAVFLGDNLVSWCARKQATVSRSSTESEYKALANATAEIMWVQ 1356

Query: 2783 NLLKELHVVLPRSA 2824
             LL EL V  P  A
Sbjct: 1357 TLLTELQVQSPPMA 1370



 Score =  146 bits (369), Expect(3) = e-124
 Identities = 74/151 (49%), Positives = 98/151 (64%)
 Frame = +1

Query: 1447 TRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLALKRN 1626
            TR Q GI K K   D  ++  N     L VT EPK +  A+++ +W  AM+ E  AL  N
Sbjct: 909  TRLQRGIRKEKVYTDGTVKYKNTF---LTVTGEPKNLTDALQNTNWKKAMDIEYEALMNN 965

Query: 1627 NTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFSPVVK 1806
             TW LVP   G N++  KWV++ K   DGSLDR+KARLVA+GF Q  G D+  TFSPVVK
Sbjct: 966  KTWHLVPPKQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVK 1025

Query: 1807 ATTVRVVLALAIMNSWSLHQLDVKNAFLNGY 1899
            A T+R+VL++A+   W + QLDV+NAFL+G+
Sbjct: 1026 AATIRIVLSIAVSRGWCMRQLDVQNAFLHGF 1056



 Score = 68.9 bits (167), Expect(3) = e-124
 Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
 Frame = +3

Query: 2814 LDQPPV--LLCDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVA 2987
            +  PP+  L CDN  A +LS NPV H R KHI++DYHFV E V Q  L+  FVP+  QVA
Sbjct: 1364 VQSPPMAKLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERVSQKLLEIDFVPTGDQVA 1423

Query: 2988 DVFT 2999
            D FT
Sbjct: 1424 DGFT 1427



 Score =  211 bits (537), Expect = 2e-51
 Identities = 102/206 (49%), Positives = 130/206 (63%)
 Frame = +3

Query: 504  KYYAIFVDDFSRFVWFYPMHAKSEFYDIFVRFQKFVETQFSAKIRTFQSDGGTEFRSNKL 683
            +YY  F+ D+S+F W Y +  KSE    F  FQ  VE  F+ KI   QSD G E+   KL
Sbjct: 534  QYYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQALVERLFNRKIIAMQSDWGGEYE--KL 591

Query: 684  QTLFVECGIQHIMSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSFWVEAFSTAAFI 863
             + F + GI H +SCPHT  QNG AERKHRHI E GL +L +SS+PL FW EAF  A ++
Sbjct: 592  HSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQAAVYL 651

Query: 864  INRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDYAASKFSPRSLACVFLGIS 1043
            INR P+ LL+  +P E L+   P Y   R+FGC  +P LR Y   K   RS  C FLG S
Sbjct: 652  INRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYS 711

Query: 1044 SVHKGYKCYDPASGRIYITRHAKFDE 1121
            ++HKG+KC DP++GR+YI+R   FDE
Sbjct: 712  TLHKGFKCLDPSTGRVYISRDVIFDE 737


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  290 bits (742), Expect(3) = e-124
 Identities = 152/314 (48%), Positives = 202/314 (64%), Gaps = 5/314 (1%)
 Frame = +2

Query: 1898 IAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTS 2077
            + + VYM QPPGF +  +P+++C+L  ALYGL+QAP AWY R    L   GF  S ADTS
Sbjct: 544  LEEEVYMRQPPGFENKGQPNYLCKLDKALYGLKQAPRAWYSRLSTKLQELGFISSKADTS 603

Query: 2078 LFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYS 2257
            LF + +G                 +  + +++LL  +  +FA+KDLG L YFLG+EV   
Sbjct: 604  LFFYNKGGCTIFILVYVDDIIVASSSAEVVAALLKDLEKDFALKDLGDLHYFLGIEVKKV 663

Query: 2258 SAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTFRADGSPF---SDLTLYRSLVGAL 2428
            S GL L QA YA DIL RA +   KP STPL+       +   F   +D + YRS+VGAL
Sbjct: 664  SQGLVLSQAWYASDILKRAGMSICKPASTPLSTTEKLSIEDGDFLGQNDASHYRSIVGAL 723

Query: 2429 QYLIITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKS-STTVLGY 2602
            QYL +TR DLS++VN V QF   PT  H+ AVKRILRY+KGT++FG+ F KS S  +  +
Sbjct: 724  QYLTLTRSDLSFLVNKVCQFLHSPTTVHWSAVKRILRYIKGTVEFGLRFGKSDSMLISAF 783

Query: 2603 SDADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLT 2782
            SDADWA C D RRST G+++FLG NL+SWSA+KQ TV+RSS E+EY+A+AN  +E+ W+ 
Sbjct: 784  SDADWAGCSDDRRSTGGFAVFLGPNLISWSARKQATVSRSSTEAEYKALANATTEVTWVR 843

Query: 2783 NLLKELHVVLPRSA 2824
             +L EL +  P  A
Sbjct: 844  KILDELRIARPSVA 857



 Score =  145 bits (366), Expect(3) = e-124
 Identities = 74/151 (49%), Positives = 98/151 (64%)
 Frame = +1

Query: 1447 TRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLALKRN 1626
            TR Q GI KPK   D  ++     Y  L  T EP+ ++ AM + +W  AM +E  A   N
Sbjct: 398  TRLQKGISKPKRYTDGTVR-----YGCLTTTGEPENLREAMANSNWRLAMEQEYSAFMSN 452

Query: 1627 NTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFSPVVK 1806
             TW LVP   G NI+  KW+++ K  ADGS+DR+KARLVA+GF Q  G D+  TFS VVK
Sbjct: 453  KTWHLVPPTQGKNIIDCKWMYKIKRKADGSIDRYKARLVAKGFKQRYGIDYEDTFSLVVK 512

Query: 1807 ATTVRVVLALAIMNSWSLHQLDVKNAFLNGY 1899
            A T+R++L++A+   WSL QLDV+NAFL+GY
Sbjct: 513  AATIRLILSIAVSKGWSLRQLDVQNAFLHGY 543



 Score = 63.2 bits (152), Expect(3) = e-124
 Identities = 31/56 (55%), Positives = 38/56 (67%)
 Frame = +3

Query: 2832 LLCDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            L CDN  A +LS NPV H R KHI+IDYHFV E V +  L  QF+ ++ Q+AD FT
Sbjct: 859  LWCDNLGATYLSANPVFHARTKHIEIDYHFVREQVAKKLLDIQFISTTDQLADGFT 914


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  287 bits (735), Expect(3) = e-123
 Identities = 147/309 (47%), Positives = 206/309 (66%), Gaps = 3/309 (0%)
 Frame = +2

Query: 1898 IAKPVYMAQPPGFIDATRPDHVCRLKIALYGLRQAPLAWYQRFRDFLVHTGFTCSSADTS 2077
            + + VYM+QPPG+ D   P+ VCRLK ALYGL+QAP AW+QR    L+  GF+ S  D+S
Sbjct: 1006 LEEQVYMSQPPGYFDPQFPNRVCRLKKALYGLKQAPRAWFQRLSSALLQWGFSMSRTDSS 1065

Query: 2078 LFIFRRGSXXXXXXXXXXXXXXTGNDPKAISSLLNRIRSEFAIKDLGRLGYFLGLEVSYS 2257
            +F+    +              TG+    ISSL+ ++ S FA++DLG+L +FLG+EVSY+
Sbjct: 1066 MFLHFGKATTLIVLVYVDDILVTGSSSTQISSLIAKLDSVFALRDLGQLSFFLGIEVSYN 1125

Query: 2258 SAGLFLGQAKYARDILLRADLFHSKPVSTPLAPNVTF-RADGSPFSDLTLYRSLVGALQY 2434
               + L Q KY  D+L R +LF +KP +TP A      + DG P +D+T YRS+VGALQY
Sbjct: 1126 EGSMTLSQTKYISDLLHRTELFDTKPANTPGAVGKNLSKFDGDPMTDVTHYRSVVGALQY 1185

Query: 2435 LIITRPDLSYVVNTVSQF-QRPTDDHFQAVKRILRYVKGTLDFGISFTKSST-TVLGYSD 2608
            + +TRPD+++ VN   QF Q+PT  H+ +VKRILRY++GT+  G+ F+ SS  T+ G++D
Sbjct: 1186 VTLTRPDIAFAVNKACQFMQQPTTAHWLSVKRILRYLRGTMQDGLLFSPSSNLTIEGFTD 1245

Query: 2609 ADWARCLDTRRSTYGYSIFLGDNLVSWSAKKQPTVARSSCESEYRAMANTASEIIWLTNL 2788
            ADW   LD RRS+ GY ++LG NLVSWS+ KQ  V+RSS ESEYR +    +EI+W+  L
Sbjct: 1246 ADWGAHLDDRRSSSGYLVYLGGNLVSWSSTKQKVVSRSSAESEYRGLVFATAEIVWMQAL 1305

Query: 2789 LKELHVVLP 2815
            L+EL V +P
Sbjct: 1306 LQELCVPIP 1314



 Score =  150 bits (378), Expect(3) = e-123
 Identities = 75/152 (49%), Positives = 99/152 (65%)
 Frame = +1

Query: 1441 MRTRSQSGIYKPKYPADLALQQSNPLYCALIVTSEPKGVKSAMKHLHWVNAMNEEMLALK 1620
            M TRS  GI K K   DL+           I  SEP  +K A K  +W  AM  E+ AL 
Sbjct: 863  MTTRSMRGITKKKTILDLSA----------IKVSEPSTLKQAFKDPNWTKAMEMEIAALH 912

Query: 1621 RNNTWELVPRPPGVNIVGSKWVFRTKLLADGSLDRHKARLVAQGFSQLPGFDFTHTFSPV 1800
            RN+TW+LV +PP VN++G KWV++ K   DGS++R+KARLVA+G++Q  G D+  TFSPV
Sbjct: 913  RNHTWDLVEQPPNVNVIGCKWVYKLKHKPDGSIERYKARLVAKGYNQTHGLDYFETFSPV 972

Query: 1801 VKATTVRVVLALAIMNSWSLHQLDVKNAFLNG 1896
            VKA T+R++L +A+   W + QLDV NAFLNG
Sbjct: 973  VKAATIRIILTVALSFKWEIRQLDVHNAFLNG 1004



 Score = 57.4 bits (137), Expect(3) = e-123
 Identities = 26/58 (44%), Positives = 39/58 (67%)
 Frame = +3

Query: 2826 PVLLCDNRSAIFLSQNPVSHKRAKHIDIDYHFV*ELVDQARLKTQFVPSSMQVADVFT 2999
            P+L  DN SA  +++NPV H R KHI+ID HF+ + V + +++ QFVP+  Q  D+ T
Sbjct: 1317 PLLWYDNISAYHMAKNPVFHARTKHIEIDLHFIRDQVMRGKIQLQFVPTEEQPVDLLT 1374



 Score =  214 bits (544), Expect = 2e-52
 Identities = 104/214 (48%), Positives = 137/214 (64%), Gaps = 1/214 (0%)
 Frame = +3

Query: 483  VMSNSVFKYYAIFVDDFSRFVWFYPMHAKSEFYDIFVRFQKFVETQFSAKIRTFQSDGGT 662
            + S S  +Y+ +FVDD+SR+ WFY +  K +   IF  F+  +E QF  KI+  QSD G 
Sbjct: 559  IKSTSGARYFILFVDDYSRYTWFYSLQTKDQALPIFKXFKLQMENQFDTKIKCLQSDNGG 618

Query: 663  EFRSNKLQTLFVEC-GIQHIMSCPHTPAQNGRAERKHRHITETGLAMLFHSSVPLSFWVE 839
            EFRS    T F++  GI H  SCP+   QNGR ERKHRH+ ETGLA+L H+S+P+ +W  
Sbjct: 619  EFRSF---TSFLQAVGIAHRFSCPYNSXQNGRVERKHRHVVETGLALLSHASLPMKYWHY 675

Query: 840  AFSTAAFIINRVPSTLLKNKSPFELLYGSIPAYGDFRIFGCRVYPCLRDYAASKFSPRSL 1019
            AF T  F+INR+PS +L+  SP+  L+   P Y  FR+FGC  YP +R Y   K   RS+
Sbjct: 676  AFQTXTFLINRMPSKVLEYDSPYFTLFRRHPDYKSFRVFGCLCYPFIRPYNTHKLQYRSV 735

Query: 1020 ACVFLGISSVHKGYKCYDPASGRIYITRHAKFDE 1121
             C+FLG S  HKG+ C D A+GR+YIT H  FDE
Sbjct: 736  QCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDE 769